# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00006.fasta.nr -Q ../query/FLJ00006.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00006, 401 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7824871 sequences Expectation_n fit: rho(ln(x))= 5.0981+/-0.000181; mu= 11.0401+/- 0.010 mean_var=67.6492+/-13.203, 0's: 35 Z-trim: 56 B-trim: 5 in 1/68 Lambda= 0.155935 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|7209313|dbj|BAA92231.1| FLJ00006 protein [Homo ( 401) 2642 603.1 3.5e-170 gi|119580784|gb|EAW60380.1| RUN and TBC1 domain co ( 390) 2514 574.3 1.6e-161 gi|194375085|dbj|BAG62655.1| unnamed protein produ ( 660) 2097 480.7 4.2e-133 gi|194380492|dbj|BAG58399.1| unnamed protein produ ( 590) 2095 480.2 5.2e-133 gi|194387240|dbj|BAG59984.1| unnamed protein produ ( 596) 2095 480.2 5.2e-133 gi|119580785|gb|EAW60381.1| RUN and TBC1 domain co ( 652) 2095 480.2 5.6e-133 gi|74760858|sp|Q96HU1.1|SGSM3_HUMAN RecName: Full= ( 749) 2095 480.3 6.3e-133 gi|119580783|gb|EAW60379.1| RUN and TBC1 domain co ( 777) 2095 480.3 6.5e-133 gi|114686542|ref|XP_001166873.1| PREDICTED: RUN an ( 658) 2086 478.2 2.3e-132 gi|114686540|ref|XP_001166901.1| PREDICTED: RUN an ( 663) 2086 478.2 2.3e-132 gi|114686534|ref|XP_001166643.1| PREDICTED: RUN an ( 704) 2086 478.2 2.4e-132 gi|114686538|ref|XP_001166775.1| PREDICTED: RUN an ( 732) 2086 478.2 2.5e-132 gi|55728240|emb|CAH90866.1| hypothetical protein [ ( 749) 2079 476.7 7.6e-132 gi|109094390|ref|XP_001097960.1| PREDICTED: simila ( 692) 2070 474.6 2.9e-131 gi|81879280|sp|Q8VCZ6.1|SGSM3_MOUSE RecName: Full= ( 750) 1995 457.8 3.7e-126 gi|148672643|gb|EDL04590.1| RUN and TBC1 domain co ( 752) 1995 457.8 3.7e-126 gi|74218138|dbj|BAE42041.1| unnamed protein produc ( 760) 1995 457.8 3.8e-126 gi|148672644|gb|EDL04591.1| RUN and TBC1 domain co ( 766) 1995 457.8 3.8e-126 gi|73969481|ref|XP_538360.2| PREDICTED: similar to ( 780) 1977 453.7 6.4e-125 gi|81885269|sp|Q6P6R7.1|SGSM3_RAT RecName: Full=Sm ( 749) 1976 453.5 7.2e-125 gi|149065867|gb|EDM15740.1| RUN and TBC1 domain co ( 755) 1976 453.5 7.3e-125 gi|34392426|dbj|BAC82539.1| hypothetical protein [ ( 749) 1971 452.4 1.6e-124 gi|149743326|ref|XP_001500167.1| PREDICTED: simila ( 784) 1948 447.2 5.9e-123 gi|122135942|sp|Q2KI13.1|SGSM3_BOVIN Small G prote ( 747) 1937 444.7 3.1e-122 gi|118082732|ref|XP_416245.2| PREDICTED: similar t ( 751) 1871 429.9 9.3e-118 gi|189441840|gb|AAI67673.1| LOC100170594 protein [ ( 753) 1814 417.0 6.8e-114 gi|160184877|sp|A6H8I2.1|SGSM3_XENLA RecName: Full ( 753) 1791 411.9 2.4e-112 gi|82208254|sp|Q7T2D0.1|SGSM3_DANRE RecName: Full= ( 755) 1713 394.3 4.7e-107 gi|168985144|emb|CAQ08934.1| small G protein signa ( 253) 1635 376.5 3.8e-102 gi|210130426|gb|EEA78097.1| hypothetical protein B ( 834) 1608 370.7 6.6e-100 gi|149525355|ref|XP_001517291.1| PREDICTED: simila ( 546) 1605 369.9 7.5e-100 gi|91095075|ref|XP_972860.1| PREDICTED: similar to ( 803) 1474 340.6 7.6e-91 gi|108881093|gb|EAT45318.1| gtpase-activating prot ( 801) 1456 336.5 1.2e-89 gi|157012345|gb|EAA00950.3| AGAP002120-PA [Anophel ( 801) 1449 335.0 3.7e-89 gi|66549359|ref|XP_395011.2| PREDICTED: similar to ( 794) 1448 334.7 4.3e-89 gi|167870950|gb|EDS34333.1| GTPase-activating prot ( 799) 1443 333.6 9.5e-89 gi|54639474|gb|EAL28876.1| GA11502 [Drosophila pse ( 804) 1425 329.6 1.6e-87 gi|190651711|gb|EDV48966.1| GG16895 [Drosophila er ( 804) 1416 327.5 6.4e-87 gi|7299972|gb|AAF55144.1| CG12241 [Drosophila mela ( 804) 1415 327.3 7.5e-87 gi|190619800|gb|EDV35324.1| GF11345 [Drosophila an ( 804) 1415 327.3 7.5e-87 gi|212505393|gb|EEB09854.1| run and tbc1 domain-co ( 799) 1413 326.9 1e-86 gi|194183888|gb|EDW97499.1| GE24277 [Drosophila ya ( 804) 1410 326.2 1.6e-86 gi|156536999|ref|XP_001608289.1| PREDICTED: simila ( 795) 1409 325.9 1.9e-86 gi|215490564|gb|EEC00207.1| RAB GTPase-activating ( 752) 1408 325.7 2.1e-86 gi|194166177|gb|EDW81078.1| GK11863 [Drosophila wi ( 810) 1406 325.3 3.1e-86 gi|156214021|gb|EDO35021.1| predicted protein [Nem ( 741) 1395 322.8 1.6e-85 gi|193916811|gb|EDW15678.1| GI10106 [Drosophila mo ( 803) 1373 317.9 5.2e-84 gi|194151458|gb|EDW66892.1| GJ23843 [Drosophila vi ( 803) 1372 317.6 6.1e-84 gi|193893715|gb|EDV92581.1| GH18844 [Drosophila gr ( 803) 1367 316.5 1.3e-83 gi|190588203|gb|EDV28245.1| hypothetical protein T ( 739) 1310 303.7 9e-80 >>gi|7209313|dbj|BAA92231.1| FLJ00006 protein [Homo sapi (401 aa) initn: 2642 init1: 2642 opt: 2642 Z-score: 3211.6 bits: 603.1 E(): 3.5e-170 Smith-Waterman score: 2642; 100.000% identity (100.000% similar) in 401 aa overlap (1-401:1-401) 10 20 30 40 50 60 FLJ000 AWLQSAGELPSDGGCSTRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|720 AWLQSAGELPSDGGCSTRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGIP 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 HGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFASM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|720 HGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFASM 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 GSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPASY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|720 GSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPASY 130 140 150 160 170 180 190 200 210 220 230 240 FLJ000 FSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|720 FSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLR 190 200 210 220 230 240 250 260 270 280 290 300 FLJ000 IWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|720 IWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMR 250 260 270 280 290 300 310 320 330 340 350 360 FLJ000 LAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPHLDPQHTGRRGHLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|720 LAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPHLDPQHTGRRGHLE 310 320 330 340 350 360 370 380 390 400 FLJ000 VQSTGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF ::::::::::::::::::::::::::::::::::::::::: gi|720 VQSTGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF 370 380 390 400 >>gi|119580784|gb|EAW60380.1| RUN and TBC1 domain contai (390 aa) initn: 2514 init1: 2514 opt: 2514 Z-score: 3056.2 bits: 574.3 E(): 1.6e-161 Smith-Waterman score: 2514; 99.740% identity (100.000% similar) in 384 aa overlap (18-401:7-390) 10 20 30 40 50 60 FLJ000 AWLQSAGELPSDGGCSTRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGIP ::::::::::::::::::::::::::::::::::::::::::: gi|119 MEDAPQRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGIP 10 20 30 40 70 80 90 100 110 120 FLJ000 HGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFASM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFASM 50 60 70 80 90 100 130 140 150 160 170 180 FLJ000 GSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPASY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPASY 110 120 130 140 150 160 190 200 210 220 230 240 FLJ000 FSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLR 170 180 190 200 210 220 250 260 270 280 290 300 FLJ000 IWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMR 230 240 250 260 270 280 310 320 330 340 350 360 FLJ000 LAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPHLDPQHTGRRGHLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPHLDPQHTGRRGHLE 290 300 310 320 330 340 370 380 390 400 FLJ000 VQSTGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF :::.::::::::::::::::::::::::::::::::::::: gi|119 VQSAGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF 350 360 370 380 390 >>gi|194375085|dbj|BAG62655.1| unnamed protein product [ (660 aa) initn: 2120 init1: 2095 opt: 2097 Z-score: 2545.9 bits: 480.7 E(): 4.2e-133 Smith-Waterman score: 2097; 98.480% identity (99.392% similar) in 329 aa overlap (15-342:7-335) 10 20 30 40 50 FLJ000 AWLQSAGELPSDGGCST-RLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGI :. :::::::::::::::::::::::::::::::::::::::::: gi|194 MSLVSVCTRKRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGI 10 20 30 40 50 60 70 80 90 100 110 FLJ000 PHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFAS 60 70 80 90 100 110 120 130 140 150 160 170 FLJ000 MGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPAS 120 130 140 150 160 170 180 190 200 210 220 230 FLJ000 YFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLL 180 190 200 210 220 230 240 250 260 270 280 290 FLJ000 RIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAM 240 250 260 270 280 290 300 310 320 330 340 350 FLJ000 RLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPHLDPQHTGRRGHL :::::::::::::::::::::::::::::::::::::::::.. gi|194 RLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVVRRRTQRRKSTITALLFGE 300 310 320 330 340 350 360 370 380 390 400 FLJ000 EVQSTGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF gi|194 DDLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNCSVELTPDYSMESHQRDHENYV 360 370 380 390 400 410 >>gi|194380492|dbj|BAG58399.1| unnamed protein product [ (590 aa) initn: 2095 init1: 2095 opt: 2095 Z-score: 2544.2 bits: 480.2 E(): 5.2e-133 Smith-Waterman score: 2095; 99.385% identity (100.000% similar) in 325 aa overlap (18-342:74-398) 10 20 30 40 FLJ000 AWLQSAGELPSDGGCSTRLRWQAHLEFTHNHDVGDLTWDKIAVSLPR :::::::::::::::::::::::::::::: gi|194 EFGFRVYKEEGDEPGSSLLANSPLMEDAPQRLRWQAHLEFTHNHDVGDLTWDKIAVSLPR 50 60 70 80 90 100 50 60 70 80 90 100 FLJ000 SEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDL 110 120 130 140 150 160 110 120 130 140 150 160 FLJ000 LRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWM 170 180 190 200 210 220 170 180 190 200 210 220 FLJ000 MSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLT 230 240 250 260 270 280 230 240 250 260 270 280 FLJ000 AFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQ 290 300 310 320 330 340 290 300 310 320 330 340 FLJ000 MEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPH :::::::::::::::::::::::::::::::::::::::::::::::::::::.. gi|194 MEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVVRRRTQR 350 360 370 380 390 400 350 360 370 380 390 400 FLJ000 LDPQHTGRRGHLEVQSTGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF gi|194 RKSTITALLFGEDDLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNCSVELTPDYS 410 420 430 440 450 460 >>gi|194387240|dbj|BAG59984.1| unnamed protein product [ (596 aa) initn: 2120 init1: 2095 opt: 2095 Z-score: 2544.1 bits: 480.2 E(): 5.2e-133 Smith-Waterman score: 2095; 99.385% identity (100.000% similar) in 325 aa overlap (18-342:7-331) 10 20 30 40 50 60 FLJ000 AWLQSAGELPSDGGCSTRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGIP ::::::::::::::::::::::::::::::::::::::::::: gi|194 MEDAPQRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGIP 10 20 30 40 70 80 90 100 110 120 FLJ000 HGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFASM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFASM 50 60 70 80 90 100 130 140 150 160 170 180 FLJ000 GSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPASY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPASY 110 120 130 140 150 160 190 200 210 220 230 240 FLJ000 FSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLR 170 180 190 200 210 220 250 260 270 280 290 300 FLJ000 IWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 IWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMR 230 240 250 260 270 280 310 320 330 340 350 360 FLJ000 LAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPHLDPQHTGRRGHLE ::::::::::::::::::::::::::::::::::::::::.. gi|194 LAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVVRRRTQRRKSTITALLFGED 290 300 310 320 330 340 370 380 390 400 FLJ000 VQSTGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF gi|194 DLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNCSVELTPDYSMESHQRDHENYVA 350 360 370 380 390 400 >>gi|119580785|gb|EAW60381.1| RUN and TBC1 domain contai (652 aa) initn: 2095 init1: 2095 opt: 2095 Z-score: 2543.6 bits: 480.2 E(): 5.6e-133 Smith-Waterman score: 2095; 99.385% identity (100.000% similar) in 325 aa overlap (18-342:7-331) 10 20 30 40 50 60 FLJ000 AWLQSAGELPSDGGCSTRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGIP ::::::::::::::::::::::::::::::::::::::::::: gi|119 MEDAPQRLRWQAHLEFTHNHDVGDLTWDKIAVSLPRSEKLRSLVLAGIP 10 20 30 40 70 80 90 100 110 120 FLJ000 HGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFASM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFASM 50 60 70 80 90 100 130 140 150 160 170 180 FLJ000 GSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPASY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPASY 110 120 130 140 150 160 190 200 210 220 230 240 FLJ000 FSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLR 170 180 190 200 210 220 250 260 270 280 290 300 FLJ000 IWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMR 230 240 250 260 270 280 310 320 330 340 350 360 FLJ000 LAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPHLDPQHTGRRGHLE ::::::::::::::::::::::::::::::::::::::::.. gi|119 LAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVVRRRTQRRKSTITALLFGED 290 300 310 320 330 340 370 380 390 400 FLJ000 VQSTGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF gi|119 DLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNCSVVSRQLPGLLPNTALTPPTPL 350 360 370 380 390 400 >>gi|74760858|sp|Q96HU1.1|SGSM3_HUMAN RecName: Full=Smal (749 aa) initn: 2095 init1: 2095 opt: 2095 Z-score: 2542.7 bits: 480.3 E(): 6.3e-133 Smith-Waterman score: 2095; 99.385% identity (100.000% similar) in 325 aa overlap (18-342:74-398) 10 20 30 40 FLJ000 AWLQSAGELPSDGGCSTRLRWQAHLEFTHNHDVGDLTWDKIAVSLPR :::::::::::::::::::::::::::::: gi|747 EFGFRVYKEEGDEPGSSLLANSPLMEDAPQRLRWQAHLEFTHNHDVGDLTWDKIAVSLPR 50 60 70 80 90 100 50 60 70 80 90 100 FLJ000 SEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 SEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDL 110 120 130 140 150 160 110 120 130 140 150 160 FLJ000 LRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 LRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWM 170 180 190 200 210 220 170 180 190 200 210 220 FLJ000 MSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 MSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLT 230 240 250 260 270 280 230 240 250 260 270 280 FLJ000 AFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 AFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQ 290 300 310 320 330 340 290 300 310 320 330 340 FLJ000 MEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPH :::::::::::::::::::::::::::::::::::::::::::::::::::::.. gi|747 MEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVVRRRTQR 350 360 370 380 390 400 350 360 370 380 390 400 FLJ000 LDPQHTGRRGHLEVQSTGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF gi|747 RKSTITALLFGEDDLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNCSVELTPDYS 410 420 430 440 450 460 >>gi|119580783|gb|EAW60379.1| RUN and TBC1 domain contai (777 aa) initn: 2095 init1: 2095 opt: 2095 Z-score: 2542.5 bits: 480.3 E(): 6.5e-133 Smith-Waterman score: 2095; 99.385% identity (100.000% similar) in 325 aa overlap (18-342:74-398) 10 20 30 40 FLJ000 AWLQSAGELPSDGGCSTRLRWQAHLEFTHNHDVGDLTWDKIAVSLPR :::::::::::::::::::::::::::::: gi|119 EFGFRVYKEEGDEPGSSLLANSPLMEDAPQRLRWQAHLEFTHNHDVGDLTWDKIAVSLPR 50 60 70 80 90 100 50 60 70 80 90 100 FLJ000 SEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDL 110 120 130 140 150 160 110 120 130 140 150 160 FLJ000 LRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWM 170 180 190 200 210 220 170 180 190 200 210 220 FLJ000 MSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLT 230 240 250 260 270 280 230 240 250 260 270 280 FLJ000 AFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQ 290 300 310 320 330 340 290 300 310 320 330 340 FLJ000 MEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPH :::::::::::::::::::::::::::::::::::::::::::::::::::::.. gi|119 MEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVVRRRTQR 350 360 370 380 390 400 350 360 370 380 390 400 FLJ000 LDPQHTGRRGHLEVQSTGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF gi|119 RKSTITALLFGEDDLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNCSVVSRQLPG 410 420 430 440 450 460 >>gi|114686542|ref|XP_001166873.1| PREDICTED: RUN and TB (658 aa) initn: 2086 init1: 2086 opt: 2086 Z-score: 2532.6 bits: 478.2 E(): 2.3e-132 Smith-Waterman score: 2086; 99.077% identity (100.000% similar) in 325 aa overlap (18-342:74-398) 10 20 30 40 FLJ000 AWLQSAGELPSDGGCSTRLRWQAHLEFTHNHDVGDLTWDKIAVSLPR :::::::::::::::::::::::::::::: gi|114 EFGFRVYKEEGDEPGSNLLANSPLMEDAPQRLRWQAHLEFTHNHDVGDLTWDKIAVSLPR 50 60 70 80 90 100 50 60 70 80 90 100 FLJ000 SEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDL :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|114 SEKLRSLVLAGIPQGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDL 110 120 130 140 150 160 110 120 130 140 150 160 FLJ000 LRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWM 170 180 190 200 210 220 170 180 190 200 210 220 FLJ000 MSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLT 230 240 250 260 270 280 230 240 250 260 270 280 FLJ000 AFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQ 290 300 310 320 330 340 290 300 310 320 330 340 FLJ000 MEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPH :::::::::::::::::::::::::::::::::::::::::::::::::::::.. gi|114 MEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVVRRRTQR 350 360 370 380 390 400 350 360 370 380 390 400 FLJ000 LDPQHTGRRGHLEVQSTGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF gi|114 RKSTITALLFGEDDLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNCSVELTPDYS 410 420 430 440 450 460 >>gi|114686540|ref|XP_001166901.1| PREDICTED: RUN and TB (663 aa) initn: 2086 init1: 2086 opt: 2086 Z-score: 2532.5 bits: 478.2 E(): 2.3e-132 Smith-Waterman score: 2086; 99.077% identity (100.000% similar) in 325 aa overlap (18-342:74-398) 10 20 30 40 FLJ000 AWLQSAGELPSDGGCSTRLRWQAHLEFTHNHDVGDLTWDKIAVSLPR :::::::::::::::::::::::::::::: gi|114 EFGFRVYKEEGDEPGSNLLANSPLMEDAPQRLRWQAHLEFTHNHDVGDLTWDKIAVSLPR 50 60 70 80 90 100 50 60 70 80 90 100 FLJ000 SEKLRSLVLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDL :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|114 SEKLRSLVLAGIPQGMRPQLWMRLSGALQKKRNSELSYREIVKNSSNDETIAAKQIEKDL 110 120 130 140 150 160 110 120 130 140 150 160 FLJ000 LRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LRTMPSNACFASMGSIGVPRLRRVLRALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWM 170 180 190 200 210 220 170 180 190 200 210 220 FLJ000 MSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MSAIIEDLLPASYFSTTLLGVQTDQRVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLT 230 240 250 260 270 280 230 240 250 260 270 280 FLJ000 AFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AFASVVDIKLLLRIWDLFFYEGSRVLFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQ 290 300 310 320 330 340 290 300 310 320 330 340 FLJ000 MEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVAQDGGPH :::::::::::::::::::::::::::::::::::::::::::::::::::::.. gi|114 MEDAELLLGVAMRLAGSLTDVAVETQRRKHLAYLIADQGQLLGAGTLTNLSQVVRRRTQR 350 360 370 380 390 400 350 360 370 380 390 400 FLJ000 LDPQHTGRRGHLEVQSTGAAENKPALPALPPSLAQSDHSCGVIQASSGFVHLRF gi|114 RKSTITALLFGEDDLEALKAKNIKQTELVADLREAILRVARHFQCTDPKNCSVELTPDYS 410 420 430 440 450 460 401 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 11:17:41 2009 done: Fri Feb 27 11:24:06 2009 Total Scan time: 871.500 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]