# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00012.fasta.huge -Q ../query/FLJ00012.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00012, 182 aa vs ./tmplib.10216 library 2210812 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.9980+/-0.0042; mu= 10.9493+/- 0.283 mean_var=96.0505+/-21.040, 0's: 0 Z-trim: 6 B-trim: 0 in 0/40 Lambda= 0.130865 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0925 ( 479 res) hh02949 ( 479) 116 31.3 0.084 KIAA1449 ( 680 res) fk04105 ( 680) 116 31.4 0.11 KIAA1242 ( 504 res) fh10406 ( 504) 109 30.0 0.22 KIAA0007 ( 686 res) ha02056 ( 686) 110 30.3 0.23 KIAA0893 ( 974 res) hk08702 ( 974) 109 30.3 0.33 KIAA0596 ( 1531 res) hg01605 (1531) 111 30.9 0.34 KIAA1824 ( 958 res) fh17057 ( 958) 103 29.1 0.72 KIAA0449 ( 1628 res) ff06247 (1628) 103 29.4 1 FLJ00218 ( 174 res) sj05575 ( 174) 85 24.9 2.5 KIAA0413 ( 1237 res) hh00077s1 (1237) 94 27.6 2.8 KIAA1942 ( 445 res) fg00781 ( 445) 86 25.6 4 KIAA0914 ( 678 res) sj01106 ( 678) 87 26.0 4.7 KIAA0199 ( 1283 res) ha03150s1 (1283) 89 26.6 5.5 KIAA1539 ( 543 res) fg02356 ( 543) 83 25.1 6.8 KIAA0900 ( 503 res) hk09606s1 ( 503) 82 24.9 7.4 KIAA0856 ( 2237 res) bf00171 (2237) 89 26.9 7.8 KIAA0725 ( 573 res) hk02781 ( 573) 82 24.9 8 KIAA1708 ( 1657 res) fj17878y1 (1657) 87 26.4 8.4 KIAA1064 ( 1315 res) hj05008s1 (1315) 85 25.9 9.4 KIAA1607 ( 1270 res) fj11118 (1270) 84 25.7 10 FLJ00173 ( 1269 res) sj00667 (1269) 83 25.5 12 KIAA0963 ( 1391 res) hj05936 (1391) 83 25.6 13 KIAA1460 ( 1400 res) fh17570 (1400) 83 25.6 13 KIAA0280 ( 291 res) ha06179 ( 291) 75 23.3 13 KIAA1397 ( 686 res) hj08255 ( 686) 79 24.4 13 FLJ00156 ( 1887 res) sh06477 (1887) 84 25.9 14 KIAA0292 ( 1716 res) ha06353 (1716) 83 25.7 14 KIAA0755 ( 1093 res) hk04532 (1093) 80 24.9 16 KIAA0712 ( 1770 res) hg04169 (1770) 81 25.3 19 FLJ00210 ( 161 res) sj05028 ( 161) 69 21.8 19 KIAA0993 ( 1556 res) bf03014 (1556) 80 25.0 20 KIAA0821 ( 1566 res) hh02631 (1566) 80 25.0 20 KIAA1836 ( 718 res) fh12206(revised) ( 718) 76 23.9 20 KIAA0901 ( 1233 res) hk09716 (1233) 78 24.6 22 KIAA0696 ( 550 res) hk04053 ( 550) 73 23.2 25 KIAA1481 ( 1380 res) fj05724 (1380) 77 24.4 27 KIAA0909 ( 1234 res) hk10471 (1234) 76 24.2 29 KIAA1715 ( 429 res) hh02382 ( 429) 70 22.5 32 KIAA0657 ( 1237 res) hk01859s1 (1237) 75 24.0 33 FLJ00267 ( 1110 res) sj04085 (1110) 74 23.7 35 KIAA1435 ( 415 res) hh13841 ( 415) 69 22.3 35 KIAA0348 ( 1443 res) hg01551(revised) (1443) 75 24.1 37 FLJ00068 ( 1194 res) as00068 (1194) 74 23.8 37 KIAA1336 ( 1219 res) bg00080 (1219) 74 23.8 37 KIAA0894 ( 553 res) hk08775 ( 553) 70 22.6 38 KIAA1645 ( 386 res) fg04139 ( 386) 68 22.1 39 KIAA0208 ( 748 res) ha02713 ( 748) 71 23.0 40 KIAA0246 ( 2589 res) ef02679 (2589) 77 24.7 41 KIAA0775 ( 639 res) hk05255 ( 639) 70 22.7 41 KIAA1932 ( 795 res) fj14525 ( 795) 71 23.0 42 >>KIAA0925 ( 479 res) hh02949 (479 aa) initn: 37 init1: 37 opt: 116 Z-score: 125.7 bits: 31.3 E(): 0.084 Smith-Waterman score: 116; 23.288% identity (57.534% similar) in 146 aa overlap (15-158:9-144) 10 20 30 40 50 60 FLJ000 EGLAECPPDPNPPYPSFKKRRGHSIGGAPEQRYQIIPVCVAARLPTRAQDVLDAHLSEVN :.... . ... : .: . : . .: ...: : :. :: KIAA09 TVTKMSWRPQYRSSKFRNVYGKVANREH----CFDG-IPI-TKNVHDNHFCAVN 10 20 30 40 70 80 90 100 110 FLJ000 AVRFGPNSSLLATGGADRLIHLWNVVGSRLEANQT-LEGAGGSITSVDFDPSGYQVLAA- . :: . : ::. .: : .. .:.: : . : :.. .. ..: ...:. KIAA09 T-RFLAIVTESAGGGSFLVIPLEQT--GRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASC 50 60 70 80 90 100 120 130 140 150 160 170 FLJ000 TYNQAAQLWKVGEAQSKVRPDWGGCLEVRGHTSGLGGLLWGLGQTLDPYLGPGYRRHCLD . . ....:.. :. : : . ::..::. .: . : KIAA09 SEDTSVRIWEIPEGGLK-RNMTEALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIW 110 120 130 140 150 160 180 FLJ000 TRIR KIAA09 NLDVGEPVKMIDCHTDVILCMSFNTDGSLLTTTCKDKKLRVIEPRSGRVLQEANCKNHRV 170 180 190 200 210 220 >>KIAA1449 ( 680 res) fk04105 (680 aa) initn: 70 init1: 44 opt: 116 Z-score: 123.9 bits: 31.4 E(): 0.11 Smith-Waterman score: 116; 25.455% identity (64.545% similar) in 110 aa overlap (52-157:116-220) 30 40 50 60 70 80 FLJ000 GHSIGGAPEQRYQIIPVCVAARLPTRAQDVLDAHLSEVNAVRFGPNSSLLATGGADRLIH : .: . :.:. .. .. :.:..: :: : KIAA14 LCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIF 90 100 110 120 130 140 90 100 110 120 130 140 FLJ000 LWNVVGSRLEANQTLEGAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKVRP-DW ::.: . : : : ......:. ... . .. . ..:: . . : ... .: : KIAA14 LWDV--NTLTA---LTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDP 150 160 170 180 190 200 150 160 170 180 FLJ000 GGC---LEVRGHTSGLGGLLWGLGQTLDPYLGPGYRRHCLDTRIR : ....:::... .:: KIAA14 RTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWA 210 220 230 240 250 260 >>KIAA1242 ( 504 res) fh10406 (504 aa) initn: 84 init1: 84 opt: 109 Z-score: 118.3 bits: 30.0 E(): 0.22 Smith-Waterman score: 112; 27.473% identity (53.297% similar) in 182 aa overlap (7-182:150-310) 10 20 30 FLJ000 EGLAECPPDPNP--PYP-SFKKRRGHSIGGAPEQRY : : : :: : . ..... .:.. KIAA12 DPQTEDRRLQPSTPEKKGLFTYSLSTKRSSPDDGNDVSPYSLSPVSNKSQKLLRSPRK-- 120 130 140 150 160 170 40 50 60 70 80 90 FLJ000 QIIPVCVAARLPTRAQDVLDA-HLSEVNAVRFGPNSSL-LATGGADRLIHLWNVVGSRLE :. ...: . :::: .:.. . . ::: . . : ..::.. :.. KIAA12 ---PTRKISKIPFK---VLDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVT 180 190 200 210 220 230 100 110 120 130 140 150 FLJ000 ANQTLEGAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKVRPDWGGCLEVRGHTS : : :.::: .. : : ..:.. .:.: .. : .:. . :: :::. KIAA12 RLCDLSVEGDSVTSVGWSERGNLVAVGTHKGFVQIWDAA-AGKKL-----SMLE--GHTA 240 250 260 270 280 160 170 180 FLJ000 GLGGLLWGLGQTLDPYLGPGYR-RHCLDTRIR .:.: :. : :. : : : :. :: KIAA12 RVGALAWNAEQ-----LSSGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWSTDHQL 290 300 310 320 330 KIAA12 LASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNT 340 350 360 370 380 390 >>KIAA0007 ( 686 res) ha02056 (686 aa) initn: 59 init1: 59 opt: 110 Z-score: 117.8 bits: 30.3 E(): 0.23 Smith-Waterman score: 111; 21.192% identity (58.940% similar) in 151 aa overlap (15-158:87-225) 10 20 30 40 FLJ000 EGLAECPPDPNPPYPSFKKRRGHSIGGAPEQRYQIIPVCVAARL :. :::.....: . . . . :.. : KIAA00 LHQEYVPSAHLSGTCTCLAWAPARLQAKESPQRKKRKSEAVGMSNQTDLLALGTAVGSIL 60 70 80 90 100 110 50 60 70 80 90 FLJ000 -------PTRAQDVLDAHLSEVNAVRFGPNSSLLATGGADRLIHLWNVVGSRLEANQTLE ... . .: ..:: ... .:. : . . :. : ::: ... . . KIAA00 LYSTVKGELHSKLISGGHDNRVNCIQWHQDSGCLYSCSDDKHIVEWNVQTCKVKCKW--K 120 130 140 150 160 170 100 110 120 130 140 150 FLJ000 GAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKVRPDWGGCLEVRGHTSGLGGLL : ..:..:. ..:.: ..:.: ... .:: : :.. : . ::.. ...:. KIAA00 GDNSSVSSLCISPDGKMLLSA--GRTIKLW-VLETKEVYR-------HFTGHATPVSSLM 180 190 200 210 220 160 170 180 FLJ000 WGLGQTLDPYLGPGYRRHCLDTRIR . KIAA00 FTTIRPPNESQPFDGITGLYFLSGAVHDRLLNVWQVRSENKEKSAVMSFTVTDEPVYIDL 230 240 250 260 270 280 >>KIAA0893 ( 974 res) hk08702 (974 aa) initn: 141 init1: 65 opt: 109 Z-score: 115.0 bits: 30.3 E(): 0.33 Smith-Waterman score: 110; 28.571% identity (65.714% similar) in 70 aa overlap (57-126:856-923) 30 40 50 60 70 80 FLJ000 GAPEQRYQIIPVCVAARLPTRAQDVLDAHLSEVNAVRFGPNSSLLATGGADRLIHLWNVV : : .: :.. ::::: : :... KIAA08 SGSQDKTVRFWDLRVPSCVRVVGTTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIR 830 840 850 860 870 880 90 100 110 120 130 140 FLJ000 GSRLEANQTLEGAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKVRPDWGGCLEV :.:. :. . .... :: :.:... .:...:.. .. KIAA08 GGRMV--QSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQGDLTKQLPIMVVGEHK 890 900 910 920 930 940 150 160 170 180 FLJ000 RGHTSGLGGLLWGLGQTLDPYLGPGYRRHCLDTRIR KIAA08 DKVIQCRWHTQDLSFLSSSADRTVTLWTYNG 950 960 970 >>KIAA0596 ( 1531 res) hg01605 (1531 aa) initn: 89 init1: 52 opt: 111 Z-score: 114.7 bits: 30.9 E(): 0.34 Smith-Waterman score: 111; 37.313% identity (70.149% similar) in 67 aa overlap (52-115:534-599) 30 40 50 60 70 FLJ000 GHSIGGAPEQRYQIIPVCVAARLPTRAQDVLDAHLSEVNAVRFG-PNSSL--LATGGADR ..:: ::. .... :...: ::... :: KIAA05 VSPNGQHLASGDRMGTLRVHELQSLSEMLKVEAHDSEILCLEYSKPDTGLKLLASASRDR 510 520 530 540 550 560 80 90 100 110 120 130 FLJ000 LIHLWNVVGSRLEANQTLEGAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKVRP :::. .. : . .:::. ..:::.: : : :: KIAA05 LIHVLDA-GREYSLQQTLDEHSSSITAVKFAASDGQVRMISCGADKSIYFRTAQKSGDGV 570 580 590 600 610 620 140 150 160 170 180 FLJ000 DWGGCLEVRGHTSGLGGLLWGLGQTLDPYLGPGYRRHCLDTRIR KIAA05 QFTRTHHVVRKTTLYDMDVEPSWKYTAIGCQDRNIRIFNISSGKQKKLFKGSQGEDGTLI 630 640 650 660 670 680 >>KIAA1824 ( 958 res) fh17057 (958 aa) initn: 168 init1: 103 opt: 103 Z-score: 108.9 bits: 29.1 E(): 0.72 Smith-Waterman score: 103; 38.235% identity (82.353% similar) in 34 aa overlap (51-84:344-377) 30 40 50 60 70 80 FLJ000 RGHSIGGAPEQRYQIIPVCVAARLPTRAQDVLDAHLSEVNAVRFGPNSSLLATGGADRLI :: .: : :: :::.:.. .. ..:....: KIAA18 GSDDFNLYMWRIPADPEAGGIGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKII 320 330 340 350 360 370 90 100 110 120 130 140 FLJ000 HLWNVVGSRLEANQTLEGAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKVRPDW ..:. KIAA18 KIWSPYKQPGCTGDLDGRIEDDSRCLYTHEEYISLVLNSGSGLSHDYANQSVQEDPRMMA 380 390 400 410 420 430 >>KIAA0449 ( 1628 res) ff06247 (1628 aa) initn: 113 init1: 60 opt: 103 Z-score: 106.2 bits: 29.4 E(): 1 Smith-Waterman score: 103; 22.143% identity (56.429% similar) in 140 aa overlap (7-137:1242-1375) 10 20 30 FLJ000 EGLAECPPDPNPPYPS-----FKKRRGHSIGGAPEQ ::. : : :.. ... :. . KIAA04 QSRATETSPLTRRKSYDRGQPIRSTDVGFTPPSSPPTRPRNDRNVFSRLTSNQSQGSALD 1220 1230 1240 1250 1260 1270 40 50 60 70 80 FLJ000 RYQIIPVCVA--ARL-PTRAQDVLDAHLSEVNAVRFGPNSSLLATGGADRLIHLWNVV-G . : :: : :: : . .. ..: . . . . .. :: ::. :: ..::.: : KIAA04 KGIISPVGGAKGARTAPLQCVSMAEGHTKPI--LCLDATDELLFTGSKDRSCKMWNLVTG 1280 1290 1300 1310 1320 90 100 110 120 130 140 FLJ000 SRLEANQTLEGAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKVRPDWGGCLEVR ... : :.: ....:. . . :.... .. ..: . .. . .: KIAA04 QEIAA---LKGHPNNVVSIKYCSHSGLVFSVS-TSYIKVWDIRDSAKCIRTLTSSGQVIS 1330 1340 1350 1360 1370 1380 150 160 170 180 FLJ000 GHTSGLGGLLWGLGQTLDPYLGPGYRRHCLDTRIR KIAA04 GDACAATSTRAITSAQGEHQINQIALSPSGTMLYAASGNAVRIWELSRFQPVGKLTGHIG 1390 1400 1410 1420 1430 1440 >>FLJ00218 ( 174 res) sj05575 (174 aa) initn: 32 init1: 32 opt: 85 Z-score: 99.2 bits: 24.9 E(): 2.5 Smith-Waterman score: 85; 24.713% identity (45.402% similar) in 174 aa overlap (11-175:8-169) 10 20 30 40 50 FLJ000 EGLAECPPDPNPPYPSFKKRRG--HSIGGAPEQRYQIIPVCVAARLPTRAQDVLDAHLSE : .:::. .: :: .. .: .: . . . ..: . FLJ002 QEWKRKWNSAFPSFSPADDGPYSKGGKDAGGADVSLACRRQSIPEEFRGITVVELIK 10 20 30 40 50 60 70 80 90 100 110 FLJ000 VNAVRFGPNSSLLATGGADR--LIHLWNVVGSRLEANQTLEGAGGSITSVDFDPSGYQVL . : . .: .::.:. .. :. . : : . : . : : ::. : .. FLJ002 ----KEGSTLGLTISGGTDKDGKPRVSNLRPGGLAARSDLLNIGDYIRSVN----GIHLT 60 70 80 90 100 120 130 140 150 160 170 FLJ000 AATYNQAAQLWK-VGE-AQSKVR---PDWGGCLEVRGHTSGLGGLLWGLGQTLDPYLGPG ... : : ::: . .:. : ::: :. : : : :. : : FLJ002 RLRHDEIITLLKNVGERVVLEVEYELPPPGGC-PWTGNFLHCLGCGW---TRLPPHQGLG 110 120 130 140 150 160 180 FLJ000 YRRHCLDTRIR : : FLJ002 GRDHARWSG 170 >>KIAA0413 ( 1237 res) hh00077s1 (1237 aa) initn: 165 init1: 93 opt: 94 Z-score: 98.4 bits: 27.6 E(): 2.8 Smith-Waterman score: 118; 29.070% identity (60.465% similar) in 86 aa overlap (53-135:685-767) 30 40 50 60 70 FLJ000 HSIGGAPEQRYQIIPVCVAARLPTRAQDVLDAHLSEVNAVRFGPNSS---LLATGGADRL : : .:: .: ::: :::::..: . KIAA04 STDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHF-TNSSHHLLLATGSSDCF 660 670 680 690 700 710 80 90 100 110 120 130 FLJ000 IHLWNVVGSRLEANQTLEGAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKVRPD ..::.. .. : .:. : .:.. :.:. . . . . . .:: . :. . KIAA04 LKLWDL--NQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSIN 720 730 740 750 760 770 140 150 160 170 180 FLJ000 WGGCLEVRGHTSGLGGLLWGLGQTLDPYLGPGYRRHCLDTRIR KIAA04 VKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHST 780 790 800 810 820 830 182 residues in 1 query sequences 2210812 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:26:44 2009 done: Fri Feb 27 10:26:44 2009 Total Scan time: 0.350 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]