# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00021.fasta.huge -Q ../query/FLJ00021.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00021, 508 aa vs ./tmplib.10216 library 2210486 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.0494+/-0.00337; mu= 23.0289+/- 0.229 mean_var=62.8646+/-13.596, 0's: 0 Z-trim: 1 B-trim: 25 in 1/39 Lambda= 0.161760 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0939 ( 595 res) hh04825s1 ( 595) 97 31.8 0.2 KIAA1851 ( 523 res) hg04492 ( 523) 82 28.2 2.2 KIAA0010 ( 1086 res) ha00408 (1086) 79 28.0 5.1 KIAA1162 ( 115 res) hj05107 ( 115) 72 24.7 5.2 FLJ00120 ( 1171 res) as00120 (1171) 79 28.0 5.3 KIAA0512 ( 710 res) hf00239 ( 710) 77 27.2 5.7 KIAA0718 ( 742 res) hk01073 ( 742) 77 27.2 5.8 FLJ00064 ( 276 res) as00064 ( 276) 73 25.6 6.8 KIAA0339 ( 1709 res) hg01304(revised) (1709) 77 27.9 8.8 KIAA0208 ( 748 res) ha02713 ( 748) 74 26.6 9.5 KIAA1606 ( 1095 res) fj10873 (1095) 73 26.6 13 KIAA1695 ( 1199 res) fj11471 (1199) 73 26.7 14 FLJ00174 ( 628 res) sj00729 ( 628) 71 25.7 14 KIAA0292 ( 1716 res) ha06353 (1716) 74 27.2 14 KIAA1192 ( 262 res) hj01820a ( 262) 67 24.2 18 KIAA1165 ( 284 res) hk01631 ( 284) 67 24.2 18 KIAA0356 ( 1058 res) hh00006s1 (1058) 71 26.1 18 KIAA0331 ( 814 res) hg00928 ( 814) 70 25.7 19 KIAA0455 ( 814 res) fh02485 ( 814) 70 25.7 19 FLJ00413 ( 308 res) sg00013 ( 308) 67 24.3 19 FLJ00264 ( 644 res) sj01648 ( 644) 69 25.3 20 KIAA0281 ( 271 res) ha06725 ( 271) 66 23.9 21 KIAA0787 ( 557 res) hk05521s1 ( 557) 68 24.9 22 KIAA0230 ( 1496 res) ha02538 (1496) 71 26.4 22 KIAA0856 ( 2237 res) bf00171 (2237) 72 26.9 22 KIAA0751 ( 1200 res) hk04424 (1200) 70 26.0 23 KIAA0501 ( 122 res) hg00500 ( 122) 63 22.7 23 FLJ00062 ( 484 res) as00062 ( 484) 67 24.6 24 FLJ00052 ( 368 res) as00052 ( 368) 66 24.2 24 KIAA0141 ( 536 res) ha03721 ( 536) 67 24.7 25 KIAA1443 ( 573 res) hj01820b ( 573) 67 24.7 26 KIAA1172 ( 929 res) hj03919(revised) ( 929) 68 25.3 28 KIAA1613 ( 686 res) fj12845 ( 686) 67 24.9 28 KIAA0252 ( 702 res) ha07048s1 ( 702) 67 24.9 28 KIAA1733 ( 509 res) ph00321 ( 509) 66 24.4 28 KIAA0287 ( 1523 res) fg06332 (1523) 69 25.9 30 KIAA1788 ( 413 res) fh22801 ( 413) 65 24.0 30 KIAA0956 ( 672 res) hj05590 ( 672) 66 24.6 33 KIAA1601 ( 690 res) fj10228 ( 690) 66 24.6 33 KIAA1404 ( 1925 res) eg01672 (1925) 69 26.1 34 KIAA0793 ( 1055 res) hk05692 (1055) 67 25.2 35 FLJ00171 ( 396 res) sj00104 ( 396) 64 23.8 35 KIAA1001 ( 551 res) hk09652 ( 551) 65 24.2 35 KIAA1050 ( 829 res) hh03308 ( 829) 66 24.8 36 KIAA1266 ( 601 res) hj06235 ( 601) 65 24.3 36 KIAA1573 ( 1185 res) fh23868 (1185) 67 25.3 37 KIAA1477 ( 870 res) fj04927 ( 870) 66 24.8 37 FLJ00229 ( 627 res) sj06546 ( 627) 65 24.3 37 FLJ00319 ( 456 res) sh07415 ( 456) 64 23.9 37 KIAA1311 ( 889 res) fh11512 ( 889) 66 24.8 37 >>KIAA0939 ( 595 res) hh04825s1 (595 aa) initn: 40 init1: 40 opt: 97 Z-score: 118.7 bits: 31.8 E(): 0.2 Smith-Waterman score: 97; 23.864% identity (53.977% similar) in 176 aa overlap (172-336:220-386) 150 160 170 180 190 FLJ000 VEMGQMASMFFNKVGVNLFYFCIIVYLYGDLAIYAA--AVPFSLMQVTCSATGNDSCGV- .::. : . : : : . ::. .. KIAA09 LGQADVISKLNMTDSFAFGSLISAVDPVATIAIFNALHVDPVLNMLVFGESILNDAVSIV 190 200 210 220 230 240 200 210 220 230 240 250 FLJ000 -----EADTKYNDTDRC-WGPLRRVDAYRIYLAIFTLLLGPFT-FFDVQKTKYLQILTSL :. :. : .: : . .. : . . . . :: .: .... :.... . KIAA09 LTNTAEGLTRKNMSDVSGWQTFLQALDYFLKMFFGSAALGTLTGLISALVLKHIDLRKTP 250 260 270 280 290 300 260 270 280 290 300 310 FLJ000 MRWIAFAVMIVLALIRIGHGQGEGHPPLADFSGVRN-LFGVCVYSFMCQHSLPSLITPVS . :..::..: . : ..: ..::. ::. :.: . .:.: : .: . KIAA09 S--LEFGMMIIFAYLPYGLAEG------ISLSGIMAILFSGIVMSHYTHHNL-SPVTQIL 310 320 330 340 350 360 320 330 340 350 360 370 FLJ000 SKRHLTRLVFLDYVLILAFYGLLSFTAIFCFRGDSLMDMYTLNFARCDVVGLAAVRFFLG .. : ..:: . ..:: :: :. KIAA09 MQQTLRTVAFLCETCVFAFLGLSIFSFPHKFEISFVIWCIVLVLFGRAVNIFPLSYLLNF 370 380 390 400 410 420 >>KIAA1851 ( 523 res) hg04492 (523 aa) initn: 35 init1: 35 opt: 82 Z-score: 100.3 bits: 28.2 E(): 2.2 Smith-Waterman score: 82; 28.358% identity (61.194% similar) in 67 aa overlap (240-304:8-65) 210 220 230 240 250 260 FLJ000 CWGPLRRVDAYRIYLAIFTLLLGPFTFFDVQKTKYLQILTSLMRWIAFAVMIVLALIRIG :. . :..... : :... . .: ..:.: KIAA18 VLELQPAQSCSVLSLVVAAMTWLVL-LGTLLCMLRVG 10 20 30 270 280 290 300 310 320 FLJ000 HG--QGEGHPPLADFSGVRNLFGVCVYSFMCQHSLPSLITPVSSKRHLTRLVFLDYVLIL : ..:: :: : ..: : :. .: .: : KIAA18 LGTPDSEGFPPRA----LHN----CPYKCICAADLLSCTGLGLQDVPAELPAATADLDLS 40 50 60 70 80 330 340 350 360 370 380 FLJ000 AFYGLLSFTAIFCFRGDSLMDMYTLNFARCDVVGLAAVRFFLGLFPVFTISTNFPIIAVT KIAA18 HNALQRLRPGWLAPLFQLRALHLDHNELDALGRGVFVNASGLRLLDLSSNTLRALGRHDL 90 100 110 120 130 140 >>KIAA0010 ( 1086 res) ha00408 (1086 aa) initn: 74 init1: 50 opt: 79 Z-score: 93.7 bits: 28.0 E(): 5.1 Smith-Waterman score: 79; 25.316% identity (55.696% similar) in 79 aa overlap (123-196:480-556) 100 110 120 130 140 150 FLJ000 NLKEEEDDDSSTASDSDVLIRDNYERAEKRPILSVQRRGSPNPFEITDRV-EMGQMASMF :.:.: :::: :: ..:. . . : . KIAA00 YSLAFNARFLRHLWFLISSMSTRMITGSMVPLLQVISRGSPMSFEDSSRIIPLFYLFSSL 450 460 470 480 490 500 160 170 180 190 200 FLJ000 FNKVGVNLF---YFCIIVYLYGDLAIYAAAVPFSLMQ-VTCSATGNDSCGVEADTKYNDT :.. ... .: . . :. .. .::.: . . : :.: KIAA00 FSHSLISIHDNEFFGDPIEVVGQR--QSSMMPFTLEELIMLSRCLRDACLGIIKLAYPET 510 520 530 540 550 560 210 220 230 240 250 260 FLJ000 DRCWGPLRRVDAYRIYLAIFTLLLGPFTFFDVQKTKYLQILTSLMRWIAFAVMIVLALIR KIAA00 KPEVREEYITAFQSIGVTTSSEMQQCIQMEQKRWIQLFKVITNLVKMLKSRDTRRNFCPP 570 580 590 600 610 620 >>KIAA1162 ( 115 res) hj05107 (115 aa) initn: 67 init1: 67 opt: 72 Z-score: 93.5 bits: 24.7 E(): 5.2 Smith-Waterman score: 72; 39.394% identity (66.667% similar) in 33 aa overlap (90-120:3-35) 60 70 80 90 100 110 FLJ000 LLVFLGFMSFVTTTFVIEAMAAANAQLHWKRMENLK--EEEDDDSSTASDSDVLIRDNYE : :.:. ::: :::. ..: :. :. : KIAA11 AHRAEQLQDAEEEKDDSNEEENKDSLVDDEEE 10 20 30 120 130 140 150 160 170 FLJ000 RAEKRPILSVQRRGSPNPFEITDRVEMGQMASMFFNKVGVNLFYFCIIVYLYGDLAIYAA . . KIAA11 KEDLGDEDEAEEEEEEDNLAAGVDEERSEANDQGPPGEDGVTREEVEPEEAEEGISEQPC 40 50 60 70 80 90 >>FLJ00120 ( 1171 res) as00120 (1171 aa) initn: 111 init1: 79 opt: 79 Z-score: 93.4 bits: 28.0 E(): 5.3 Smith-Waterman score: 79; 35.294% identity (61.765% similar) in 34 aa overlap (104-137:1019-1052) 80 90 100 110 120 130 FLJ000 FVIEAMAAANAQLHWKRMENLKEEEDDDSSTASDSDVLIRDNYERAEKRPILSVQRRGSP : ::.. ::.. : .: . .:. .: FLJ001 ERRRPVLFTPTVLAKTLVQRLLNSGGAMEFTICKSDIVTRDEFLRRQKTETIIYSREKNP 990 1000 1010 1020 1030 1040 140 150 160 170 180 190 FLJ000 NPFEITDRVEMGQMASMFFNKVGVNLFYFCIIVYLYGDLAIYAAAVPFSLMQVTCSATGN : :: FLJ001 NAFECIAPANIEAVAAKNKHCLLEAGIGCTRDLIKSNIYPIVLFIRVCEKNIKRFRKLLP 1050 1060 1070 1080 1090 1100 >>KIAA0512 ( 710 res) hf00239 (710 aa) initn: 40 init1: 40 opt: 77 Z-score: 92.8 bits: 27.2 E(): 5.7 Smith-Waterman score: 77; 31.250% identity (60.938% similar) in 64 aa overlap (78-140:399-459) 50 60 70 80 90 100 FLJ000 AFATAGWLVSLVLLVFLGFMSFVTTTFVIEAMAAANA-QLHWKRMENLKEEEDDDSSTAS : :.::. : .. . .: :. ..: : KIAA05 NGGKGKGKKSKVEVDELGMGFRPGDGAAAAAAASANGGQAFLAEVPDSEEGESGWTDTES 370 380 390 400 410 420 110 120 130 140 150 160 FLJ000 DSDVLIRDNYERAEKRPILSVQRRGSPNPFEITDRVEMGQMASMFFNKVGVNLFYFCIIV ::: . . . .::. ..:.: : :.:: . KIAA05 DSDSEPETQRRGRGRRPV-AMQKR--PFPYEIDEILGVRDLRKVLALLQKSDDPFIQQVA 430 440 450 460 470 480 170 180 190 200 210 220 FLJ000 YLYGDLAIYAAAVPFSLMQVTCSATGNDSCGVEADTKYNDTDRCWGPLRRVDAYRIYLAI KIAA05 LLTLSNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQGRLQV 490 500 510 520 530 540 >>KIAA0718 ( 742 res) hk01073 (742 aa) initn: 53 init1: 53 opt: 77 Z-score: 92.7 bits: 27.2 E(): 5.8 Smith-Waterman score: 77; 23.596% identity (59.551% similar) in 89 aa overlap (366-449:398-486) 340 350 360 370 380 390 FLJ000 TAIFCFRGDSLMDMYTLNFARCDVVGLAAVRFFLGLFPVFTISTNFPIIAVTL-RN--NW ...:. :...: : :. .... :. .. KIAA07 VTPVPGTHPLLVFVNPKSGGKQGERIYRKFQYLLNPRQVYSLSGNGPMPGLNFFRDVPDF 370 380 390 400 410 420 400 410 420 430 440 450 FLJ000 KTLFHREGGTYPWVVDRVVFPTITLVPPV-LVAFCT-HDLESLVGITGAYAGTGIQYVIP ..: :: ::.: . .. ::: .. . : .:: . :.: : ... .. KIAA07 RVLACGGDGTVGWVLDCIEKANVGKHPPVAILPLGTGNDLARCLRWGGGYEGENLMKILK 430 440 450 460 470 480 460 470 480 490 500 FLJ000 AFLVYHCRRDTQLAFGCGVSNKHRSPFRHTFWVGFVLLWAFSCFIFVTANIILSETKL KIAA07 DIENSTEIMLDRWKFEVIPNDKDEKGDPVPYSIINNYFSIGVDASIAHRFHIMREKHPEK 490 500 510 520 530 540 >>FLJ00064 ( 276 res) as00064 (276 aa) initn: 114 init1: 73 opt: 73 Z-score: 91.4 bits: 25.6 E(): 6.8 Smith-Waterman score: 73; 57.895% identity (78.947% similar) in 19 aa overlap (432-450:191-209) 410 420 430 440 450 460 FLJ000 TYPWVVDRVVFPTITLVPPVLVAFCTHDLESLVGITGAYAGTGIQYVIPAFLVYHCRRDT :: :: ::..:.: . ::: FLJ000 EEFAKDVGAQILLHSHKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRL 170 180 190 200 210 220 470 480 490 500 FLJ000 QLAFGCGVSNKHRSPFRHTFWVGFVLLWAFSCFIFVTANIILSETKL FLJ000 VPNMTPEVVGEQACGAGTRGGGQELLCPGRDLGNKGCYSTDTRAMHAPASWLWPSQ 230 240 250 260 270 >>KIAA0339 ( 1709 res) hg01304(revised) (1709 aa) initn: 76 init1: 76 opt: 77 Z-score: 89.4 bits: 27.9 E(): 8.8 Smith-Waterman score: 78; 27.907% identity (47.674% similar) in 86 aa overlap (75-151:1345-1430) 50 60 70 80 90 FLJ000 MPKAFATAGWLVSLVLLVFLGFMSFVTTTFVIEAMAAANAQLHWKRMENLKE-------- : :: ::. .: :. .: KIAA03 PALRPPEPVPAPAALFSSPADEVLEAPEVVVAEAEEPKPQQLQQQREEGEEEGEEEGEEE 1320 1330 1340 1350 1360 1370 100 110 120 130 140 150 FLJ000 -EEDDDSSTASDSDVLIRDNYERAEKRPILSVQRRGSPNPFEITDRVEMGQMASMFFNKV ::..:::..::.. .: :.. : : : : :. ::. .. KIAA03 EEESSDSSSSSDGEGALRRRSLRSHARRRRPPPPPPPPPPRAYEPRSEFEQMTILYDIWN 1380 1390 1400 1410 1420 1430 160 170 180 190 200 210 FLJ000 GVNLFYFCIIVYLYGDLAIYAAAVPFSLMQVTCSATGNDSCGVEADTKYNDTDRCWGPLR KIAA03 SGLDSEDMSYLRLTYERLLQQTSGADWLNDTHWVHHTITNLTTPKRKRRPQDGPREHQTG 1440 1450 1460 1470 1480 1490 >>KIAA0208 ( 748 res) ha02713 (748 aa) initn: 87 init1: 62 opt: 74 Z-score: 88.8 bits: 26.6 E(): 9.5 Smith-Waterman score: 74; 34.043% identity (55.319% similar) in 47 aa overlap (91-136:533-579) 70 80 90 100 110 120 FLJ000 LVFLGFMSFVTTTFVIEAMAAANAQLHWKRMENLKEEEDDDSSTASDSDVLIRDNYERAE : ::. .. : :: :::.:.: . : KIAA02 LLKAGFIRHTVNKITFSEQCYYIFGDLCGNMANLSLHDHDGSSGASDQDTLAPLPHPGAA 510 520 530 540 550 560 130 140 150 160 170 FLJ000 KRPI-LSVQRRGSPNPFEITDRVEMGQMASMFFNKVGVNLFYFCIIVYLYGDLAIYAAAV :. . : :.:. KIAA02 PWPMAFPYQYPPPPHPYNPHPGFPELGYSYGGGSASSQHSEGSRSSGSNRSGSDRRKEKD 570 580 590 600 610 620 508 residues in 1 query sequences 2210486 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:27:27 2009 done: Fri Feb 27 10:27:27 2009 Total Scan time: 0.580 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]