# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00023.fasta.huge -Q ../query/FLJ00023.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00023, 192 aa vs ./tmplib.10216 library 2210802 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.6753+/-0.00373; mu= 12.1619+/- 0.252 mean_var=79.1478+/-17.521, 0's: 0 Z-trim: 2 B-trim: 0 in 0/40 Lambda= 0.144163 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00212 ( 407 res) sj05073 ( 407) 93 28.1 0.69 KIAA1905 ( 626 res) ag00008 ( 626) 95 28.7 0.69 KIAA1727 ( 1130 res) pg00153 (1130) 94 28.7 1.2 KIAA1367 ( 579 res) fj03001 ( 579) 83 26.1 3.7 KIAA0362 ( 1108 res) hh00083 (1108) 85 26.9 4.3 KIAA0003 ( 524 res) hk04939 ( 524) 81 25.7 4.6 KIAA1920 ( 445 res) ae00146 ( 445) 80 25.4 4.8 KIAA0663 ( 816 res) hk02006 ( 816) 80 25.7 7.2 KIAA1011 ( 3541 res) ff02850 (3541) 85 27.4 9.4 KIAA0058 ( 181 res) ha01532 ( 181) 70 22.9 11 KIAA0803 ( 1708 res) hj03049(revised) (1708) 80 26.0 12 KIAA1008 ( 935 res) hh04776s1 ( 935) 77 25.1 12 KIAA1793 ( 1270 res) fj07087 (1270) 78 25.5 13 FLJ00310 ( 291 res) sh06047 ( 291) 70 23.1 15 KIAA0747 ( 1072 res) hk04143 (1072) 76 25.0 15 KIAA0642 ( 1329 res) hh02837 (1329) 77 25.3 15 KIAA0687 ( 1175 res) hk02992 (1175) 76 25.0 16 KIAA0145 ( 1198 res) hg01767 (1198) 75 24.8 19 KIAA1904 ( 821 res) af00058 ( 821) 73 24.2 20 KIAA0575 ( 952 res) hj00216 ( 952) 73 24.3 22 KIAA0234 ( 1512 res) ha02764 (1512) 75 24.9 22 KIAA0956 ( 672 res) hj05590 ( 672) 71 23.7 23 KIAA1229 ( 696 res) fh05775 ( 696) 71 23.7 24 KIAA0142 ( 802 res) ha01169 ( 802) 71 23.8 26 KIAA1231 ( 1061 res) fh08195s1 (1061) 72 24.1 27 KIAA1036 ( 380 res) fh01447 ( 380) 67 22.6 28 KIAA1465 ( 785 res) fh13187 ( 785) 70 23.6 29 KIAA0369 ( 794 res) hh00177 ( 794) 70 23.6 30 KIAA1663 ( 347 res) hk01115 ( 347) 66 22.4 30 KIAA1227 ( 1069 res) fh04710 (1069) 71 23.9 31 KIAA0181 ( 2079 res) ha02522s1 (2079) 74 24.9 32 KIAA0549 ( 469 res) hh00779 ( 469) 67 22.7 32 KIAA2035 ( 1135 res) ff09201 (1135) 71 24.0 33 FLJ00360 ( 137 res) sh04326 ( 137) 61 20.9 33 KIAA1012 ( 1452 res) hj06464(revised) (1452) 72 24.3 33 KIAA0155 ( 1195 res) ha02997 (1195) 71 24.0 34 KIAA0855 ( 632 res) hk06219 ( 632) 68 23.1 34 KIAA1937 ( 704 res) fk04595 ( 704) 68 23.1 36 KIAA1751 ( 710 res) pj02443 ( 710) 68 23.1 36 KIAA0339 ( 1709 res) hg01304(revised) (1709) 72 24.4 37 KIAA1664 ( 920 res) fj04751s1 ( 920) 69 23.4 38 KIAA0922 ( 790 res) hh02839a ( 790) 68 23.2 39 KIAA1898 ( 1013 res) fk06427 (1013) 69 23.5 40 KIAA0506 ( 78 res) hh00087 ( 78) 57 19.8 40 KIAA2017 ( 3051 res) fk13965y1 (3051) 74 25.1 41 KIAA1274 ( 861 res) hk09836s1 ( 861) 68 23.2 42 KIAA0758 ( 1370 res) hh15259 (1370) 70 23.8 43 FLJ00272 ( 165 res) sh00274 ( 165) 60 20.8 43 KIAA1875 ( 922 res) pf00972 ( 922) 68 23.2 43 KIAA1780 ( 1192 res) pf01012 (1192) 69 23.6 45 >>FLJ00212 ( 407 res) sj05073 (407 aa) initn: 67 init1: 67 opt: 93 Z-score: 109.3 bits: 28.1 E(): 0.69 Smith-Waterman score: 93; 32.000% identity (58.667% similar) in 75 aa overlap (95-169:191-257) 70 80 90 100 110 120 FLJ000 KFVFFNIPQIQYKNPWVQIMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKI :: : .. .: :: . .::. . FLJ002 SELEFGGTLENEEPAQEEPEPITASGSLKALRKLLTASVEVPVD-----SAPVMEEDTN- 170 180 190 200 210 130 140 150 160 170 180 FLJ000 LGKNEETLREEEEEKKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPKEMRGKYKA :... ..::::.:. :. : . : . : . . : :.: ::: FLJ002 -GESHVPQENEEEEEKEPSQAAAIHPDN-CEESEVSEREAQPPCPEAHGEELGGFPEVGS 220 230 240 250 260 270 190 FLJ000 ALKADAQD FLJ002 PASPPASGGLTEEPLGPMEGELPGEACTLTAHEGRGGKCTEEGDASQQEGCTLGSDPICL 280 290 300 310 320 330 >>KIAA1905 ( 626 res) ag00008 (626 aa) initn: 34 init1: 34 opt: 95 Z-score: 109.3 bits: 28.7 E(): 0.69 Smith-Waterman score: 96; 22.543% identity (50.289% similar) in 173 aa overlap (15-174:412-580) 10 20 30 40 FLJ000 FLVAARLAARGVGPATVAAMPMKGRFPIRRTLQYLSQGNVVFKD : . .:. . .. . :. .: :.: KIAA19 ETPIFKQFFKDWRDKDQSDGFGKVYVTEKVAQIKQIPFDAS-KLHSSPQMAAQHNMVDDG 390 400 410 420 430 440 50 60 70 80 90 FLJ000 SVKV----------MTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQIMMFKN-MTPSP : :: . :. :..::. : ..... :. : : .. .: : KIAA19 SGKVEIWRVENNGRIQVDQNSYGEFYGGDCYIILYTYPRGQIIYTWQGANATRDELTTSA 450 460 470 480 490 500 100 110 120 130 140 150 FLJ000 FLRFYLDS--GEQVLVDVETKSNKEIMEHIRKILGKNEETLREEEEEKKQLSHPANFGPR :: :: : :. :.......:: . :. ... . . .. :: . :: : KIAA19 FLTVQLDRSLGGQA-VQIRVSQGKEPV-HLLSLFKDKPLIIYKNGTSKKGGQAPAP-PTR 510 520 530 540 550 160 170 180 190 FLJ000 KYCLRECICEVEGQVPCPSLVPLPKEMRGKYKAALKADAQD . .:. . . : : .:: KIAA19 LFQVRRNLASITRIVERSSGIPLEGKKTTRPHHYWKPRLKTIHLGFTAALTKLEDLLLKR 560 570 580 590 600 610 >>KIAA1727 ( 1130 res) pg00153 (1130 aa) initn: 65 init1: 65 opt: 94 Z-score: 105.0 bits: 28.7 E(): 1.2 Smith-Waterman score: 94; 25.490% identity (51.961% similar) in 102 aa overlap (47-143:372-473) 20 30 40 50 60 70 FLJ000 VAAMPMKGRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQY : . : . ::: . . :. : : ... KIAA17 FSEKLHHVQKTARLSLENTEAELHLLFVRTKSLKENIQRDGELCQQMEDFLQFAIEKLRE 350 360 370 380 390 400 80 90 100 110 120 130 FLJ000 KNPWVQIMMFKNMTPSPFL-----RFYLDSGEQVLVDVETKSNKEIMEHIRKILGKNEET . : : .. . .: :. . :: :.. : :: :: . .. . . .. KIAA17 LECWKQELQDEAYTLIDFFCEDKKTMKLDECFQIFRDFCTKFNKAVKDNHDREAQELRQL 410 420 430 440 450 460 140 150 160 170 180 190 FLJ000 LREEEEEKKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPKEMRGKYKAALKADAQ : .:.:.:: : KIAA17 QRLKEQEQKQRSWATGELGAFGRSSSENDVELLTKKGAEGLLPFLHPRPISPSSPSYRPP 470 480 490 500 510 520 >>KIAA1367 ( 579 res) fj03001 (579 aa) initn: 75 init1: 50 opt: 83 Z-score: 96.2 bits: 26.1 E(): 3.7 Smith-Waterman score: 83; 25.000% identity (60.000% similar) in 80 aa overlap (74-147:140-213) 50 60 70 80 90 100 FLJ000 DSVKVMTVNYNTHGELGEGARKFVFFNIPQIQY-KNPWVQIMMFKNMTPSPFLRFYLDSG ::. ..: .:.. ::. . :: .:. KIAA13 GLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNP 110 120 130 140 150 160 110 120 130 140 150 FLJ000 EQVLVDVETKS-----NKEIMEHIRKILGKNEETLREEEEEKKQLSHPANFGPRKYCLRE . ....: .. .::. :...: : :..: .: . :. :. KIAA13 SEKITEIELRKRVKLEGKELEEYLEK------EKLKKEAAKKLEQSKEADIDSSDESDIE 170 180 190 200 210 220 160 170 180 190 FLJ000 CICEVEGQVPCPSLVPLPKEMRGKYKAALKADAQD KIAA13 EDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFL 230 240 250 260 270 280 >>KIAA0362 ( 1108 res) hh00083 (1108 aa) initn: 73 init1: 73 opt: 85 Z-score: 95.0 bits: 26.9 E(): 4.3 Smith-Waterman score: 85; 25.581% identity (58.140% similar) in 86 aa overlap (108-190:535-613) 80 90 100 110 120 130 FLJ000 NPWVQIMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKN---EETLRE . :. :...:::.::.. :. ::.... KIAA03 DGAEAALQEIEKFLETGAENKIQELNAIYKEYESILNQDLMEHVRKVFQKQASMEEVFHR 510 520 530 540 550 560 140 150 160 170 180 190 FLJ000 EEEEKKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPKEMRGKYKAALKADAQD .. :.:. . . : :. .. :::: : ::. ... .. : KIAA03 RQASLKKLAARQTRPVQPVAPRP---EALAKSPCPS----PGIRRGSENSSSEGGALRRG 570 580 590 600 610 KIAA03 PYRRAKSEMSESRQGRGSAGEEEESLAILRRHVMSELLDTERAYVEELLCVLEGYAAEMD 620 630 640 650 660 670 >>KIAA0003 ( 524 res) hk04939 (524 aa) initn: 45 init1: 45 opt: 81 Z-score: 94.5 bits: 25.7 E(): 4.6 Smith-Waterman score: 81; 21.495% identity (62.617% similar) in 107 aa overlap (37-142:142-245) 10 20 30 40 50 60 FLJ000 LAARGVGPATVAAMPMKGRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKF : :.: . .. .. .. . .. .: .::. KIAA00 LEHVMENYTQWLQKLENYIVENMKSEMAQIQQNAVQNHTATMLEIGTSLLSQTAEQTRKL 120 130 140 150 160 170 70 80 90 100 110 120 FLJ000 VFFNIPQIQYKNPWVQIMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEH-IRKIL . . :. .. ..:....: . :. : . . .. .. :.. ..:: : .. KIAA00 TDVET-QVLNQTSRLEIQLLENSLSTYKLEKQLLQQTNEILKIHEKNS--LLEHKILEME 180 190 200 210 220 130 140 150 160 170 180 FLJ000 GKNEETLREEEEEKKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPKEMRGKYKAA ::..: : .:::..: KIAA00 GKHKEELDTLKEEKENLQGLVTRQTYIIQELEKQLNRATTNNSVLQKQQLELMDTVHNLV 230 240 250 260 270 280 >>KIAA1920 ( 445 res) ae00146 (445 aa) initn: 46 init1: 46 opt: 80 Z-score: 94.2 bits: 25.4 E(): 4.8 Smith-Waterman score: 80; 26.582% identity (55.696% similar) in 79 aa overlap (5-79:318-394) 10 20 30 FLJ000 FLVAARLAARGVGPAT----VAAMPMKGRFPIRR : : : .: : :. : :: : .. KIAA19 IQRATVWMLQLEPLHTQNTQQEALTTAHLEATLEEAGPSPPTFHCEVVQAPRKGNFQLQG 290 300 310 320 330 340 40 50 60 70 80 90 FLJ000 TLQYLSQGNVVFKDSVKVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQIMMFKNMT :. ::.:. .:.:.. :.:.. .. . ... :.. : .: KIAA19 TM--LSDGQGFTQDDVQAAEVTYGAMARASVAVEDTFCFHVTAPPYFSPLCTFSIHIGGD 350 360 370 380 390 400 100 110 120 130 140 150 FLJ000 PSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKNEETLREEEEEKKQLSHPANFGP KIAA19 PDMPVLTNVLVVPEGGGCVLSADQLFVKSLNSARYLYEVM 410 420 430 440 >>KIAA0663 ( 816 res) hk02006 (816 aa) initn: 63 init1: 63 opt: 80 Z-score: 91.0 bits: 25.7 E(): 7.2 Smith-Waterman score: 80; 25.333% identity (56.000% similar) in 75 aa overlap (99-173:535-608) 70 80 90 100 110 120 FLJ000 FNIPQIQYKNPWVQIMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKILGKN .:: .. .... :.. : :: : KIAA06 HEATPGARRLLRITKRTGMKEEKNLQEGNEVDSQSSIRTEAKEASGETTGVDITKIQVKR 510 520 530 540 550 560 130 140 150 160 170 180 FLJ000 EETLREEEEEKKQLSHPANFGPRKYCLRECICEVEGQVPCPSLVPLPKEMRGKYKAALKA ::.::.. .:.: . . . : . . : .: .. : . :: KIAA06 CETMREKHMQKQQEREKSVLTPLRGDVASCNTQV-AEKPVLTAVPGITRHLTKRLPTKSS 570 580 590 600 610 620 190 FLJ000 DAQD KIAA06 QKVEVETSGIGDSLLNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEMHA 630 640 650 660 670 680 >>KIAA1011 ( 3541 res) ff02850 (3541 aa) initn: 42 init1: 42 opt: 85 Z-score: 88.9 bits: 27.4 E(): 9.4 Smith-Waterman score: 85; 24.675% identity (54.545% similar) in 154 aa overlap (30-179:452-603) 10 20 30 40 50 FLJ000 FLVAARLAARGVGPATVAAMPMKGRFPIRRTL-QYLSQGNVVFKDSVKVMTVNYNTHGE ::: .. : .....:: . .. .. . KIAA10 EEYSDLLKSTEAWIENTSHLLANPADYDSLRTLSHHASTVQMALEDSEQKHNLLHSIFMD 430 440 450 460 470 480 60 70 80 90 100 110 FLJ000 LGEGARKFVFFNIPQ-IQYKNPWVQIMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEI : . . : .. : :: . : .. : : : .. . : . : .. :.:: .. KIAA10 LEDLSIIFETDELTQSIQELSNQVTALQQKIMESLPQIQRMAD--DVVAIESEVKSMEKR 490 500 510 520 530 120 130 140 150 160 170 FLJ000 MEHIRKILGKNE-ETLREEEEEKKQLSHPANFGPRKYCLRECIC-EVEGQVPCPSLVPLP . .:. :: ..: . ::. :. :. : : . : . .:: ..: .. ::: KIAA10 VSKIKTILLSKEIFDFSPEEHLKHGEVILENIRPMKKTIAEIVSYQVELRLPQTGMKPLP 540 550 560 570 580 590 180 190 FLJ000 KEMRGKYKAALKADAQD .: KIAA10 VFQRTNQLLQDIKLLENVTQEQNELLKVVIKQTNEWDEEIENLKQILNNYSAQFSLEHMS 600 610 620 630 640 650 >>KIAA0058 ( 181 res) ha01532 (181 aa) initn: 48 init1: 48 opt: 70 Z-score: 87.7 bits: 22.9 E(): 11 Smith-Waterman score: 70; 33.333% identity (61.538% similar) in 39 aa overlap (10-48:6-42) 10 20 30 40 50 60 FLJ000 FLVAARLAARGVGPATVAAMPMKGRFPIRRTLQYLSQGNVVFKDSVKVMTVNYNTHGELG : .:::: .: ::..: . : :: :. ..... KIAA00 PSATPRQTGPAT--TMNSKGQYPTQPTYPVQPPGNPVYPQTLHLPQAPPYTDAPPA 10 20 30 40 50 70 80 90 100 110 120 FLJ000 EGARKFVFFNIPQIQYKNPWVQIMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEH KIAA00 YSELYRPSFVHPGAATVPTMSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYPVGPIYPPG 60 70 80 90 100 110 192 residues in 1 query sequences 2210802 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:27:29 2009 done: Fri Feb 27 10:27:29 2009 Total Scan time: 0.360 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]