# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00030.fasta.huge -Q ../query/FLJ00030.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00030, 249 aa vs ./tmplib.10216 library 2210745 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.8237+/-0.00328; mu= 15.8836+/- 0.222 mean_var=61.9086+/-13.675, 0's: 0 Z-trim: 1 B-trim: 9 in 1/39 Lambda= 0.163004 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1500 ( 2240 res) hh12031s1 (2240) 92 30.9 0.69 KIAA0731 ( 1096 res) hk03714 (1096) 81 27.9 2.7 KIAA1352 ( 1212 res) fj01313 (1212) 78 27.3 4.6 KIAA0907 ( 569 res) hk10396 ( 569) 75 26.1 4.7 KIAA0312 ( 3192 res) ff01724 (3192) 81 28.5 5.2 KIAA1138 ( 1239 res) hj05928 (1239) 77 27.0 5.5 KIAA2016 ( 1715 res) pf04366 (1715) 78 27.4 5.7 KIAA0414 ( 492 res) hh00161 ( 492) 72 25.4 7 KIAA1885 ( 1098 res) fj04812 (1098) 74 26.3 8.3 KIAA0005 ( 424 res) ha00071 ( 424) 70 24.8 8.8 KIAA0162 ( 1730 res) ha03982 (1730) 75 26.7 9.4 KIAA0357 ( 2992 res) hh00016y2 (2992) 77 27.5 9.5 KIAA1250 ( 1777 res) pf01137 (1777) 74 26.5 11 KIAA0096 ( 766 res) ha01240s1 ( 766) 70 25.1 13 KIAA1341 ( 620 res) fj00303 ( 620) 69 24.8 13 KIAA0965 ( 489 res) hj06174s1 ( 489) 68 24.4 13 KIAA1041 ( 642 res) fh02801 ( 642) 69 24.8 13 FLJ00068 ( 1194 res) as00068 (1194) 71 25.6 14 KIAA0164 ( 929 res) ha02373 ( 929) 70 25.2 14 KIAA1913 ( 509 res) fk05496 ( 509) 67 24.2 16 KIAA0767 ( 598 res) aj00389 ( 598) 67 24.3 18 KIAA1725 ( 1042 res) pf00950 (1042) 69 25.1 18 KIAA0721 ( 433 res) hk01908 ( 433) 65 23.6 20 KIAA1754 ( 594 res) pj02616 ( 594) 66 24.0 21 KIAA1294 ( 1051 res) fg01155 (1051) 68 24.8 22 KIAA0309 ( 3053 res) hg00096s1 (3053) 72 26.4 22 FLJ00233 ( 535 res) sj06856 ( 535) 65 23.8 23 KIAA0513 ( 412 res) hf00293 ( 412) 64 23.4 23 KIAA0764 ( 419 res) hk04750 ( 419) 64 23.4 23 KIAA0207 ( 605 res) ha02795 ( 605) 65 23.8 25 FLJ00403 ( 225 res) sj07657 ( 225) 61 22.3 26 KIAA0977 ( 1207 res) hj07018 (1207) 67 24.7 28 KIAA1594 ( 931 res) fj09468 ( 931) 66 24.3 28 KIAA0059 ( 724 res) ha00949s1 ( 724) 65 23.9 28 KIAA1812 ( 803 res) hh13045 ( 803) 65 24.0 30 FLJ00226 ( 1046 res) sj06303 (1046) 66 24.4 30 KIAA1426 ( 1066 res) fg04231s1 (1066) 66 24.4 30 KIAA0948 ( 531 res) hj05004 ( 531) 63 23.3 32 KIAA0371 ( 1203 res) hh00252 (1203) 66 24.4 32 KIAA1395 ( 2051 res) hj07927s1 (2051) 68 25.2 32 KIAA0799 ( 2111 res) fg01615y1 (2111) 68 25.2 33 KIAA1454 ( 1265 res) fh15916 (1265) 66 24.5 33 KIAA0548 ( 452 res) hh00769 ( 452) 62 23.0 34 KIAA1224 ( 997 res) fh02652 ( 997) 65 24.1 34 KIAA1187 ( 813 res) fk03027 ( 813) 64 23.7 35 KIAA0311 ( 2324 res) hg00112s1 (2324) 68 25.3 35 KIAA1223 ( 1089 res) pg00513 (1089) 65 24.1 36 KIAA0458 ( 1552 res) ef01252 (1552) 66 24.6 38 KIAA1143 ( 116 res) hj00512 ( 116) 56 20.8 38 KIAA1447 ( 1721 res) fh04686 (1721) 66 24.6 40 >>KIAA1500 ( 2240 res) hh12031s1 (2240 aa) initn: 72 init1: 47 opt: 92 Z-score: 109.3 bits: 30.9 E(): 0.69 Smith-Waterman score: 92; 27.966% identity (50.000% similar) in 118 aa overlap (28-138:9-118) 10 20 30 40 50 60 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEEDARTRIIRRAALEFEDGMYANLGIGIPLLASN :: .. :: .:. :: .. : KIAA15 SEVSNFTMEDINNKKIRYSAVFETDGHLVT--------DSF 10 20 30 70 80 90 100 110 FLJ000 FISPSMTVHLHSENGILGLGPFPTEDEVD----ADLINAGKQTVTVLPGGCFFASDDSFA ..: : : : .: :. . :.:. ::::.. . . : :::.::. KIAA15 YFSVSDMDHNHLDNQIFTIMITPAENPPPVIAFADLITVDEGGRAPLSFHHFFATDDDDN 40 50 60 70 80 90 120 130 140 150 160 170 FLJ000 MIRGGHIQLTML---GAMQVSKYGDLANWMIPGKKVKGMGGAMDLVSSQKTRVVVTMQHC . : . :.:. : : .. . :: KIAA15 LQRDAIIKLSALPKYGCIENTGTGDRFGPETASDLEASFPIQDVLENYIYYFQSVHESIE 100 110 120 130 140 150 >>KIAA0731 ( 1096 res) hk03714 (1096 aa) initn: 60 init1: 60 opt: 81 Z-score: 98.7 bits: 27.9 E(): 2.7 Smith-Waterman score: 81; 25.714% identity (51.429% similar) in 105 aa overlap (50-147:80-181) 20 30 40 50 60 70 FLJ000 EDGDAGKEEDARTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGL .:.:. :::. . . : . . .. :: KIAA07 GVLRGTGGGGRTPRRPGLQSGGPSSPPAPLVGLGFTAAASNWEGAAPRV--NPDPSLQGL 50 60 70 80 90 100 80 90 100 110 120 130 FLJ000 GPF-PTEDEVDADLINAGKQTVTVLP------GGCFFASDDSFAMIRGGHIQLTMLGAMQ :: : : . : : ... : ..:: .: .. : . . . :. . KIAA07 GPSAPEEGVAGALLAKVNPWTKNALPPVLTTVNGQSPPEHSAPAKVVRAAVPKQRKGS-K 110 120 130 140 150 160 140 150 160 170 180 190 FLJ000 VSKYGDLANWMIPGKKVKGMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGK :. .:: :: ::. KIAA07 VGDFGDAINWPTPGEIAHKSVQPQSHKPQPTRKLPPKKDMKEQEKGEGSDSKESPKTKSD 170 180 190 200 210 220 >>KIAA1352 ( 1212 res) fj01313 (1212 aa) initn: 43 init1: 43 opt: 78 Z-score: 94.4 bits: 27.3 E(): 4.6 Smith-Waterman score: 78; 20.870% identity (48.696% similar) in 115 aa overlap (96-205:296-409) 70 80 90 100 110 120 FLJ000 MTVHLHSENGILGLGPFPTEDEVDADLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQL : : :.: . .... ..: .: : KIAA13 KIKFGKRYTIYSPKDGQPCMDHDRQTGEGVGPQEYTLLKLKVLEPYPSKLSGLKGKNIFL 270 280 290 300 310 320 130 140 150 160 170 180 FLJ000 TMLGAMQVSKYGDLANWMIPGKKVKG---MGGAMDLVSSQKTRVVVTMQHCTKDN--TPK . . .:. :. : : : ..: . .. .::. ...: :::: .: KIAA13 VAATLRPETMFGQTNCWVRPDMKYIGFETVNGDI-FICTQKAARNMSYQGFTKDNGVVPV 330 340 350 360 370 380 190 200 210 220 230 240 FLJ000 IMEKCTMPLTGKRCVDRIITEKAVFDVHRKKGLTLRELWEGLTVDDIKKSTGCAFAVSPN . : . : . . :... KIAA13 VKELMGEEILGASLSAPLTSYKVIYVLPMLTIKEDKGTGVVTSVPSDSPDDIAALRDLKK 390 400 410 420 430 440 >>KIAA0907 ( 569 res) hk10396 (569 aa) initn: 60 init1: 38 opt: 75 Z-score: 94.3 bits: 26.1 E(): 4.7 Smith-Waterman score: 75; 27.083% identity (52.083% similar) in 96 aa overlap (145-234:50-141) 120 130 140 150 160 170 FLJ000 FAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVKGMGGAMDLVSSQKTRV-VVTMQHC :: . . .::.: ... ... .. : . KIAA09 RSKWDQPAPAPLLFLPPAAPGGEVTSSGGSPGGTTAAPSGALDAAAAVAAKINAMLMAKG 20 30 40 50 60 70 180 190 200 210 220 FLJ000 TKDNTPKIMEKCTMPLTG----KRCVDRIITEKAVFDVHRKKGLTLRELW-EGLTVDDIK : . :: : : : : ...: . :: :: :.: .: : :.:. KIAA09 KLKPTQNASEKLQAPGKGLTSNKSKDDLVVAEVEINDV----PLTCRNLLTRGQTQDEIS 80 90 100 110 120 130 230 240 FLJ000 KSTGCAFAVSPNLRPMQQVAP . .: : KIAA09 RLSGAAVSTRGRFMTTEEKAKVGPGDRPLYLHVQGQTRELVDRAVNRIKEIITNGVVKAA 140 150 160 170 180 190 >>KIAA0312 ( 3192 res) ff01724 (3192 aa) initn: 42 init1: 42 opt: 81 Z-score: 93.5 bits: 28.5 E(): 5.2 Smith-Waterman score: 81; 29.577% identity (57.746% similar) in 71 aa overlap (5-74:1522-1592) 10 20 30 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEE-DARTR .. ::: ..:. .. . : :::. . : . KIAA03 LDAESMHDCVSVVKVSIVNHLEFLRDEELEERREKRRKQLAEEETKITDKGKEDKENRDQ 1500 1510 1520 1530 1540 1550 40 50 60 70 80 90 FLJ000 IIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDADLI . .: . .:. ::. : :. : .:: : ::. KIAA03 SAQCTASKSNDSTEQNLSDGTPMPDSYPTTPSSTDAATSESKETLGTLQSSQQQPTLPTP 1560 1570 1580 1590 1600 1610 100 110 120 130 140 150 FLJ000 NAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVKGMG KIAA03 PALGEVPQELQSPAGEGGSSTQLLMPVEPEELGPTRPSGEAETTQMELSPAPTITSLSPE 1620 1630 1640 1650 1660 1670 >>KIAA1138 ( 1239 res) hj05928 (1239 aa) initn: 77 init1: 77 opt: 77 Z-score: 93.1 bits: 27.0 E(): 5.5 Smith-Waterman score: 77; 42.857% identity (67.857% similar) in 28 aa overlap (73-100:89-116) 50 60 70 80 90 100 FLJ000 EDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDADLINAGKQTVTV ::: :::: : : .. .:.: . ..: KIAA11 APGDGGEAPPAAGLGYDPYNPELPKPPAQRENGTLGLGEEPRPDVLELELVNQAIEAVRS 60 70 80 90 100 110 110 120 130 140 150 160 FLJ000 LPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVKGMGGAMDLVSSQ KIAA11 EVELEQRRYRELLETTREHRSAEAPALAPRGPNASPTVGPDEDAFPLAFDYSPGSHGLLS 120 130 140 150 160 170 >>KIAA2016 ( 1715 res) pf04366 (1715 aa) initn: 36 init1: 36 opt: 78 Z-score: 92.8 bits: 27.4 E(): 5.7 Smith-Waterman score: 78; 31.373% identity (54.902% similar) in 51 aa overlap (160-210:1454-1502) 130 140 150 160 170 180 FLJ000 AMQVSKYGDLANWMIPGKKVKGMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPL : .:: .: ... ..: . . :: .:: KIAA20 TENNSIWELIHTKSEIEGRPETIFQLCCSDSESKTNIVKVIRSILRENFRRHI-KCELPL 1430 1440 1450 1460 1470 1480 190 200 210 220 230 240 FLJ000 TGKRCVDRIITEKAVFDVHRKKGLTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP : : ::.. : : : KIAA20 E-KTCKDRLVPLKNRVPVSAKLASSRSLKVLKNSSSNEWTGETGKGTLLDSDEGSLSSGT 1490 1500 1510 1520 1530 1540 >>KIAA0414 ( 492 res) hh00161 (492 aa) initn: 47 init1: 47 opt: 72 Z-score: 91.2 bits: 25.4 E(): 7 Smith-Waterman score: 72; 29.825% identity (59.649% similar) in 57 aa overlap (151-206:183-239) 130 140 150 160 170 FLJ000 GHIQLTMLGAMQVSKYGDLANWMIPGKKVKGMGGAMDLVSSQKTRVVVTMQHCTKDN-TP : :: :. ..:. : . .. :::. . KIAA04 TVLCQKLNHGSDHQSPSSSSYNGLVESFELGSGGHTDFPKAQELRDGENEEESTKDELSS 160 170 180 190 200 210 180 190 200 210 220 230 FLJ000 KIMEKCTMPLTGKRCVDRIITEKAVFDVHRKKGLTLRELWEGLTVDDIKKSTGCAFAVSP .. :. .: ... ::. :: : : KIAA04 QLTEHEYLPSNSSTEHDRLSTEMASQDGEEGASDSAEFHYTRPMYSKPSIMAHKRWIHVK 220 230 240 250 260 270 >>KIAA1885 ( 1098 res) fj04812 (1098 aa) initn: 42 init1: 42 opt: 74 Z-score: 89.8 bits: 26.3 E(): 8.3 Smith-Waterman score: 74; 29.310% identity (58.621% similar) in 58 aa overlap (75-129:350-406) 50 60 70 80 90 100 FLJ000 GMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDADLINAGKQTVTVLP :.: ::.. : ::... .: .:: KIAA18 SAISDIEVENRPLPGHTQLRLPGCPTPVSFGLLFSVAFPVDGEPDAEVV-VGTTRPETLP 320 330 340 350 360 370 110 120 130 140 150 160 FLJ000 GGCFFA--SDDS-FAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVKGMGGAMDLVSS : : ::: .. ..: ... ..: KIAA18 GDVAVAVHPDDSRYTHLHGRQLRHPLMGQPLPLITDYAVQPHVGTGAVKVTPAHSPADAE 380 390 400 410 420 430 >>KIAA0005 ( 424 res) ha00071 (424 aa) initn: 64 init1: 64 opt: 70 Z-score: 89.4 bits: 24.8 E(): 8.8 Smith-Waterman score: 70; 35.714% identity (67.857% similar) in 28 aa overlap (221-248:89-116) 200 210 220 230 240 FLJ000 GKRCVDRIITEKAVFDVHRKKGLTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP : .::. .. :.::.. .:. :: : KIAA00 LDASGAKLDYRRYAETLFDILVAGGMLAPGGTLADDMMRTDVCVFAAQEDLETMQAFAQV 60 70 80 90 100 110 KIAA00 FNKLIRRYKYLEKGFEDEVKKLLLFLKGFSESERNKLAMLTGVLLANGTLNASILNSLYN 120 130 140 150 160 170 249 residues in 1 query sequences 2210745 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:28:34 2009 done: Fri Feb 27 10:28:34 2009 Total Scan time: 0.400 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]