# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00030.fasta.nr -Q ../query/FLJ00030.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00030, 249 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826343 sequences Expectation_n fit: rho(ln(x))= 4.7431+/-0.000181; mu= 11.0962+/- 0.010 mean_var=67.2353+/-13.262, 0's: 35 Z-trim: 39 B-trim: 2991 in 1/67 Lambda= 0.156414 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|10440389|dbj|BAB15730.1| FLJ00030 protein [Homo ( 249) 1655 381.8 5.6e-104 gi|193787445|dbj|BAG52651.1| unnamed protein produ ( 517) 1634 377.3 2.6e-102 gi|48428678|sp|Q9BYC2.2|SCOT2_HUMAN RecName: Full= ( 517) 1634 377.3 2.6e-102 gi|189069495|dbj|BAG37161.1| unnamed protein produ ( 517) 1627 375.8 7.7e-102 gi|123993329|gb|ABM84266.1| 3-oxoacid CoA transfer ( 513) 1607 371.2 1.8e-100 gi|194207655|ref|XP_001503528.2| PREDICTED: simila ( 517) 1429 331.1 2.2e-88 gi|194665147|ref|XP_001787207.1| PREDICTED: hypoth ( 517) 1376 319.1 8.7e-85 gi|119224094|gb|AAI26643.1| OXCT2 protein [Bos tau ( 517) 1371 318.0 1.9e-84 gi|76679516|ref|XP_580811.2| PREDICTED: similar to ( 517) 1367 317.1 3.5e-84 gi|10934047|dbj|BAA97654.2| Scot-t1 [Mus musculus] ( 520) 1349 313.0 5.9e-83 gi|88682937|gb|AAI13759.1| 3-oxoacid CoA transfera ( 520) 1349 313.0 5.9e-83 gi|10934052|dbj|BAB16879.1| Scot-t2 [Mus musculus] ( 520) 1349 313.0 5.9e-83 gi|205829936|sp|B2GV06.1|SCOT_RAT RecName: Full=Su ( 520) 1333 309.4 7.3e-82 gi|221042836|dbj|BAH13095.1| unnamed protein produ ( 334) 1327 307.9 1.3e-81 gi|74198777|dbj|BAE30619.1| unnamed protein produc ( 520) 1329 308.5 1.4e-81 gi|48428679|sp|Q9D0K2.1|SCOT_MOUSE RecName: Full=S ( 520) 1329 308.5 1.4e-81 gi|158429137|pdb|2NRC|A Chain A, C28a Mutant Of Su ( 481) 1327 308.0 1.8e-81 gi|158429133|pdb|2NRB|A Chain A, C28s Mutant Of Su ( 481) 1327 308.0 1.8e-81 gi|27574274|pdb|1O9L|A Chain A, Succinate:coenzyme ( 481) 1327 308.0 1.8e-81 gi|187236272|gb|ACD02073.1| 3-oxoacid CoA transfer ( 331) 1325 307.4 1.8e-81 gi|2492999|sp|Q29551.1|SCOT_PIG RecName: Full=Succ ( 520) 1327 308.1 1.9e-81 gi|196049886|pdb|3DLX|A Chain A, Crystal Structure ( 489) 1326 307.8 2.1e-81 gi|114600464|ref|XP_001137684.1| PREDICTED: 3-oxoa ( 506) 1326 307.8 2.1e-81 gi|114600456|ref|XP_001137948.1| PREDICTED: 3-oxoa ( 520) 1326 307.8 2.2e-81 gi|189065410|dbj|BAG35249.1| unnamed protein produ ( 520) 1326 307.8 2.2e-81 gi|2492998|sp|P55809.1|SCOT_HUMAN RecName: Full=Su ( 520) 1326 307.8 2.2e-81 gi|114600460|ref|XP_001137854.1| PREDICTED: 3-oxoa ( 521) 1326 307.8 2.2e-81 gi|60830216|gb|AAX36917.1| 3-oxoacid CoA transfera ( 521) 1326 307.8 2.2e-81 gi|30585423|gb|AAP36984.1| Homo sapiens 3-oxoacid ( 521) 1326 307.8 2.2e-81 gi|114600454|ref|XP_001137767.1| PREDICTED: 3-oxoa ( 527) 1326 307.8 2.2e-81 gi|114600462|ref|XP_001137599.1| PREDICTED: 3-oxoa ( 534) 1326 307.8 2.2e-81 gi|74222276|dbj|BAE26941.1| unnamed protein produc ( 520) 1324 307.4 3e-81 gi|48146215|emb|CAG33330.1| OXCT [Homo sapiens] ( 520) 1322 306.9 4.1e-81 gi|109077088|ref|XP_001087718.1| PREDICTED: 3-oxoa ( 520) 1322 306.9 4.1e-81 gi|149023882|gb|EDL80379.1| rCG31267 [Rattus norve ( 520) 1320 306.5 5.6e-81 gi|54035559|gb|AAH83681.1| 3-oxoacid CoA transfera ( 520) 1320 306.5 5.6e-81 gi|55732298|emb|CAH92852.1| hypothetical protein [ ( 520) 1319 306.3 6.5e-81 gi|48425136|pdb|1OOZ|A Chain A, Deletion Mutant Of ( 475) 1317 305.8 8.3e-81 gi|90079695|dbj|BAE89527.1| unnamed protein produc ( 287) 1311 304.2 1.5e-80 gi|73954281|ref|XP_536487.2| PREDICTED: similar to ( 594) 1313 305.0 1.8e-80 gi|89994095|gb|AAI14162.1| 3-oxoacid CoA transfera ( 520) 1304 302.9 6.8e-80 gi|149732915|ref|XP_001496367.1| PREDICTED: simila ( 639) 1303 302.7 9.2e-80 gi|60098851|emb|CAH65256.1| hypothetical protein [ ( 517) 1287 299.0 9.6e-79 gi|149252978|ref|XP_001475976.1| PREDICTED: simila ( 514) 1265 294.1 3e-77 gi|28373589|pdb|1M3E|A Chain A, Succinyl-Coa:3-Ket ( 481) 1239 288.2 1.7e-75 gi|50603835|gb|AAH78408.1| 3-oxoacid CoA transfera ( 525) 1237 287.8 2.4e-75 gi|126321657|ref|XP_001371488.1| PREDICTED: hypoth ( 662) 1234 287.2 4.6e-75 gi|109002516|ref|XP_001111685.1| PREDICTED: simila ( 691) 1224 284.9 2.3e-74 gi|27769205|gb|AAH42239.1| MGC69180 protein [Xenop ( 529) 1211 281.9 1.4e-73 gi|37747748|gb|AAH59355.1| MGC69180 protein [Xenop ( 530) 1211 281.9 1.4e-73 >>gi|10440389|dbj|BAB15730.1| FLJ00030 protein [Homo sap (249 aa) initn: 1655 init1: 1655 opt: 1655 Z-score: 2022.9 bits: 381.8 E(): 5.6e-104 Smith-Waterman score: 1655; 100.000% identity (100.000% similar) in 249 aa overlap (1-249:1-249) 10 20 30 40 50 60 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEEDARTRIIRRAALEFEDGMYANLGIGIPLLASN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 VIKGQKYEKRIERLTIRKEEDGDAGKEEDARTRIIRRAALEFEDGMYANLGIGIPLLASN 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 FISPSMTVHLHSENGILGLGPFPTEDEVDADLINAGKQTVTVLPGGCFFASDDSFAMIRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 FISPSMTVHLHSENGILGLGPFPTEDEVDADLINAGKQTVTVLPGGCFFASDDSFAMIRG 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 GHIQLTMLGAMQVSKYGDLANWMIPGKKVKGMGGAMDLVSSQKTRVVVTMQHCTKDNTPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 GHIQLTMLGAMQVSKYGDLANWMIPGKKVKGMGGAMDLVSSQKTRVVVTMQHCTKDNTPK 130 140 150 160 170 180 190 200 210 220 230 240 FLJ000 IMEKCTMPLTGKRCVDRIITEKAVFDVHRKKGLTLRELWEGLTVDDIKKSTGCAFAVSPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 IMEKCTMPLTGKRCVDRIITEKAVFDVHRKKGLTLRELWEGLTVDDIKKSTGCAFAVSPN 190 200 210 220 230 240 FLJ000 LRPMQQVAP ::::::::: gi|104 LRPMQQVAP >>gi|193787445|dbj|BAG52651.1| unnamed protein product [ (517 aa) initn: 1634 init1: 1634 opt: 1634 Z-score: 1993.1 bits: 377.3 E(): 2.6e-102 Smith-Waterman score: 1634; 99.197% identity (99.197% similar) in 249 aa overlap (1-249:269-517) 10 20 30 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEEDA :::::::::::::::: ::::::::::::: gi|193 DVTAVEVEEIVEVGAFPPEDIHVPNIYVDRVIKGQKYEKRIERLTILKEEDGDAGKEEDA 240 250 260 270 280 290 40 50 60 70 80 90 FLJ000 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDA 300 310 320 330 340 350 100 110 120 130 140 150 FLJ000 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK 360 370 380 390 400 410 160 170 180 190 200 210 FLJ000 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK 420 430 440 450 460 470 220 230 240 FLJ000 KGLTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP : ::::::::::::::::::::::::::::::::::::: gi|193 KELTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP 480 490 500 510 >>gi|48428678|sp|Q9BYC2.2|SCOT2_HUMAN RecName: Full=Succ (517 aa) initn: 1634 init1: 1634 opt: 1634 Z-score: 1993.1 bits: 377.3 E(): 2.6e-102 Smith-Waterman score: 1634; 99.197% identity (99.197% similar) in 249 aa overlap (1-249:269-517) 10 20 30 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEEDA :::::::::::::::: ::::::::::::: gi|484 DVTAVEVEEIVEVGAFPPEDIHVPNIYVDRVIKGQKYEKRIERLTILKEEDGDAGKEEDA 240 250 260 270 280 290 40 50 60 70 80 90 FLJ000 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDA 300 310 320 330 340 350 100 110 120 130 140 150 FLJ000 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK 360 370 380 390 400 410 160 170 180 190 200 210 FLJ000 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK 420 430 440 450 460 470 220 230 240 FLJ000 KGLTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP : ::::::::::::::::::::::::::::::::::::: gi|484 KELTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP 480 490 500 510 >>gi|189069495|dbj|BAG37161.1| unnamed protein product [ (517 aa) initn: 1627 init1: 1627 opt: 1627 Z-score: 1984.5 bits: 375.8 E(): 7.7e-102 Smith-Waterman score: 1627; 98.795% identity (98.795% similar) in 249 aa overlap (1-249:269-517) 10 20 30 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEEDA :::::::::::::::: ::::::::::::: gi|189 DVTAVEVEEIVEVGAFPPEDIHVPNIYVDRVIKGQKYEKRIERLTILKEEDGDAGKEEDA 240 250 260 270 280 290 40 50 60 70 80 90 FLJ000 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|189 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDGVDA 300 310 320 330 340 350 100 110 120 130 140 150 FLJ000 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK 360 370 380 390 400 410 160 170 180 190 200 210 FLJ000 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK 420 430 440 450 460 470 220 230 240 FLJ000 KGLTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP ::::::::: ::::::::::::::::::::::::::::: gi|189 KGLTLRELWGGLTVDDIKKSTGCAFAVSPNLRPMQQVAP 480 490 500 510 >>gi|123993329|gb|ABM84266.1| 3-oxoacid CoA transferase (513 aa) initn: 1607 init1: 1607 opt: 1607 Z-score: 1960.2 bits: 371.2 E(): 1.8e-100 Smith-Waterman score: 1607; 99.184% identity (99.184% similar) in 245 aa overlap (1-245:269-513) 10 20 30 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEEDA :::::::::::::::: ::::::::::::: gi|123 DVTAVEVEEIVEVGAFPPEDIHVPNIYVDRVIKGQKYEKRIERLTILKEEDGDAGKEEDA 240 250 260 270 280 290 40 50 60 70 80 90 FLJ000 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDA 300 310 320 330 340 350 100 110 120 130 140 150 FLJ000 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK 360 370 380 390 400 410 160 170 180 190 200 210 FLJ000 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK 420 430 440 450 460 470 220 230 240 FLJ000 KGLTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP : ::::::::::::::::::::::::::::::::: gi|123 KELTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQ 480 490 500 510 >>gi|194207655|ref|XP_001503528.2| PREDICTED: similar to (517 aa) initn: 1429 init1: 1429 opt: 1429 Z-score: 1743.1 bits: 331.1 E(): 2.2e-88 Smith-Waterman score: 1429; 84.739% identity (94.378% similar) in 249 aa overlap (1-249:269-517) 10 20 30 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEEDA ::.:.:::::::::::::::.: : :: gi|194 NTSVVEVEEIVDVGSFAPEDIHVPNIYVDRVIQGEKYEKRIERLTIRKEESGKAKAAEDI 240 250 260 270 280 290 40 50 60 70 80 90 FLJ000 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDA :: ::.::::::::::::::::::::::::.:::..::::::::::::::::: .:.::: gi|194 RTWIIKRAALEFEDGMYANLGIGIPLLASNYISPNITVHLHSENGILGLGPFPRKDQVDA 300 310 320 330 340 350 100 110 120 130 140 150 FLJ000 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK :::::::::::..::::::.:::::::::::::.:::::::::::::::::::::::.:: gi|194 DLINAGKQTVTIFPGGCFFSSDDSFAMIRGGHIHLTMLGAMQVSKYGDLANWMIPGKRVK 360 370 380 390 400 410 160 170 180 190 200 210 FLJ000 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK ::::::::::: ::::::::.: :: : :::.:::::::::::::::.:::.::::: .: gi|194 GMGGAMDLVSSAKTRVVVTMEHSTKANEPKILEKCTMPLTGKRCVDRVITERAVFDVDKK 420 430 440 450 460 470 220 230 240 FLJ000 KGLTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP .:::: ::::::::.::.:::: .:::::.::::::::: gi|194 RGLTLTELWEGLTVEDIRKSTGSTFAVSPDLRPMQQVAP 480 490 500 510 >>gi|194665147|ref|XP_001787207.1| PREDICTED: hypothetic (517 aa) initn: 1376 init1: 1376 opt: 1376 Z-score: 1678.4 bits: 319.1 E(): 8.7e-85 Smith-Waterman score: 1376; 82.591% identity (93.522% similar) in 247 aa overlap (1-247:269-515) 10 20 30 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEEDA .:.:.::::::::::.:::.: . .. gi|194 RTSVVEVEEIVDVGSFAPEDIHVPNIYVDRIIQGEKYEKRIERLTVRKEDDEICTSSDNI 240 250 260 270 280 290 40 50 60 70 80 90 FLJ000 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDA :::::.:::::::::::::::::::::: :.:::..::::::::::::::::: ..:::: gi|194 RTRIIKRAALEFEDGMYANLGIGIPLLAPNYISPNITVHLHSENGILGLGPFPLKEEVDA 300 310 320 330 340 350 100 110 120 130 140 150 FLJ000 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK :::::::::::.:::: ::.::.::::::::::.::.:::::::::::::::::::::: gi|194 DLINAGKQTVTLLPGGSFFSSDESFAMIRGGHINLTLLGAMQVSKYGDLANWMIPGKKVT 360 370 380 390 400 410 160 170 180 190 200 210 FLJ000 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK :::::::::::.::::::::.::.: : :::.::::::::::::::::::::::::::.: gi|194 GMGGAMDLVSSSKTRVVVTMEHCNKANEPKIVEKCTMPLTGKRCVDRIITEKAVFDVHKK 420 430 440 450 460 470 220 230 240 FLJ000 KGLTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP :::: :::.::::.::::::: :::::.::::::: gi|194 TGLTLMELWDGLTVEDIKKSTGSPFAVSPSLRPMQQVKM 480 490 500 510 >>gi|119224094|gb|AAI26643.1| OXCT2 protein [Bos taurus] (517 aa) initn: 1371 init1: 1371 opt: 1371 Z-score: 1672.3 bits: 318.0 E(): 1.9e-84 Smith-Waterman score: 1371; 82.186% identity (93.522% similar) in 247 aa overlap (1-247:269-515) 10 20 30 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEEDA .:.:.:::.::::::.:::.: . .. gi|119 RTSVVEVEEIVDVGSFAPEDIHVPNIYVDRIIQGEKYEERIERLTVRKEDDEICTSSDNI 240 250 260 270 280 290 40 50 60 70 80 90 FLJ000 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDA :::::.:::::::::::::::::::::: :.:::..::::::::::::::::: ..:::: gi|119 RTRIIKRAALEFEDGMYANLGIGIPLLAPNYISPNITVHLHSENGILGLGPFPLKEEVDA 300 310 320 330 340 350 100 110 120 130 140 150 FLJ000 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK :::::::::::.:::: ::.::.::::::::::.::.:::::::::::::::::::::: gi|119 DLINAGKQTVTLLPGGSFFSSDESFAMIRGGHINLTLLGAMQVSKYGDLANWMIPGKKVT 360 370 380 390 400 410 160 170 180 190 200 210 FLJ000 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK :::::::::::.::::::::.::.: : :::.::::::::::::::::::::::::::.: gi|119 GMGGAMDLVSSSKTRVVVTMEHCNKANEPKIVEKCTMPLTGKRCVDRIITEKAVFDVHKK 420 430 440 450 460 470 220 230 240 FLJ000 KGLTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP :::: :::.::::.::::::: :::::.::::::: gi|119 TGLTLMELWDGLTVEDIKKSTGSPFAVSPSLRPMQQVKM 480 490 500 510 >>gi|76679516|ref|XP_580811.2| PREDICTED: similar to 3-o (517 aa) initn: 1367 init1: 1367 opt: 1367 Z-score: 1667.5 bits: 317.1 E(): 3.5e-84 Smith-Waterman score: 1367; 82.186% identity (93.117% similar) in 247 aa overlap (1-247:269-515) 10 20 30 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEEDA .:.:.::::::::::.:::.: . .. gi|766 RTSVVEVEEIVDVGSFAPEDIHVPNIYVDRIIQGEKYEKRIERLTVRKEDDEICTSSDNI 240 250 260 270 280 290 40 50 60 70 80 90 FLJ000 RTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVDA :::::.:::::::::::::::::::::: :.:::..::::::::::::::::: ..:::: gi|766 RTRIIKRAALEFEDGMYANLGIGIPLLAPNYISPNITVHLHSENGILGLGPFPLKEEVDA 300 310 320 330 340 350 100 110 120 130 140 150 FLJ000 DLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKVK :::::::::::.:::: ::.::.::::::::::.::.:::::::::::::::::::::: gi|766 DLINAGKQTVTLLPGGSFFSSDESFAMIRGGHINLTLLGAMQVSKYGDLANWMIPGKKVT 360 370 380 390 400 410 160 170 180 190 200 210 FLJ000 GMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHRK :::::::::::.::: ::::.::.: : :::.::::::::::::::::::::::::::.: gi|766 GMGGAMDLVSSSKTRGVVTMEHCNKANEPKIVEKCTMPLTGKRCVDRIITEKAVFDVHKK 420 430 440 450 460 470 220 230 240 FLJ000 KGLTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP :::: :::.::::.::::::: :::::.::::::: gi|766 TGLTLMELWDGLTVEDIKKSTGSPFAVSPSLRPMQQVKM 480 490 500 510 >>gi|10934047|dbj|BAA97654.2| Scot-t1 [Mus musculus] (520 aa) initn: 1346 init1: 1261 opt: 1349 Z-score: 1645.5 bits: 313.0 E(): 5.9e-83 Smith-Waterman score: 1349; 79.839% identity (94.355% similar) in 248 aa overlap (1-247:269-516) 10 20 FLJ000 VIKGQKYEKRIERLTIRKEEDGDAGKEED- :::: :.:::::::: : . . ..:..: gi|109 DISVVEVEEIVDVGTFAPEDIHVPNIYVDRVIKGPKFEKRIERLTTRDSKPAPGSKDNDP 240 250 260 270 280 290 30 40 50 60 70 80 FLJ000 ARTRIIRRAALEFEDGMYANLGIGIPLLASNFISPSMTVHLHSENGILGLGPFPTEDEVD .:::::.::::::.::::::::::::.::::.:::.:::.:::::::::::::: ..::: gi|109 SRTRIIKRAALEFQDGMYANLGIGIPVLASNYISPKMTVYLHSENGILGLGPFPLKNEVD 300 310 320 330 340 350 90 100 110 120 130 140 FLJ000 ADLINAGKQTVTVLPGGCFFASDDSFAMIRGGHIQLTMLGAMQVSKYGDLANWMIPGKKV ::.::::::::::.:::::::::::::::::::.:::::::::::.::::::::.::::: gi|109 ADVINAGKQTVTVVPGGCFFASDDSFAMIRGGHLQLTMLGAMQVSQYGDLANWMVPGKKV 360 370 380 390 400 410 150 160 170 180 190 200 FLJ000 KGMGGAMDLVSSQKTRVVVTMQHCTKDNTPKIMEKCTMPLTGKRCVDRIITEKAVFDVHR ::::::::::::.::::::::.:::: . :::..::::::::::::: ::::::::.:.. gi|109 KGMGGAMDLVSSKKTRVVVTMEHCTKTKQPKILKKCTMPLTGKRCVDLIITEKAVFEVNH 420 430 440 450 460 470 210 220 230 240 FLJ000 KKGLTLRELWEGLTVDDIKKSTGCAFAVSPNLRPMQQVAP .::::: ::::: .::::: .:.:.:::::::.::::. gi|109 SKGLTLVELWEGSSVDDIKATTACSFAVSPNLKPMQQIKLDA 480 490 500 510 520 249 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 14:20:28 2009 done: Fri Feb 27 14:25:39 2009 Total Scan time: 729.280 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]