# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00035.fasta.nr -Q ../query/FLJ00035.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00035, 187 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7827445 sequences Expectation_n fit: rho(ln(x))= 4.5276+/-0.000178; mu= 9.8877+/- 0.010 mean_var=57.2844+/-11.205, 0's: 28 Z-trim: 28 B-trim: 54 in 1/64 Lambda= 0.169456 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|10440404|dbj|BAB15735.1| FLJ00035 protein [Homo ( 187) 1256 314.8 4.8e-84 gi|169207429|ref|XP_001716032.1| PREDICTED: simila ( 381) 1256 315.0 8.3e-84 gi|169207061|ref|XP_001718439.1| PREDICTED: simila ( 404) 1256 315.0 8.6e-84 gi|119368573|sp|Q9H7N3.2|CN056_HUMAN RecName: Full ( 144) 964 243.3 1.2e-62 >>gi|10440404|dbj|BAB15735.1| FLJ00035 protein [Homo sap (187 aa) initn: 1256 init1: 1256 opt: 1256 Z-score: 1665.1 bits: 314.8 E(): 4.8e-84 Smith-Waterman score: 1256; 100.000% identity (100.000% similar) in 187 aa overlap (1-187:1-187) 10 20 30 40 50 60 FLJ000 QFRIYYTHCYLNTHRKLLSSPRPLQSISRAHIIVRPLFSSLQPMFRAYRAYHVYYITIRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 QFRIYYTHCYLNTHRKLLSSPRPLQSISRAHIIVRPLFSSLQPMFRAYRAYHVYYITIRH 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 KPKQLAAGLLNIATAEIFSGLEEEPLQMSTNFSNFLVYGMKSLKLTALCSTIGLHDARGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 KPKQLAAGLLNIATAEIFSGLEEEPLQMSTNFSNFLVYGMKSLKLTALCSTIGLHDARGR 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 VGKKVARSLVVGIHRLPLKGVLPGWRMLLEEKRERHETGTLQSCHHGNVTQWHRACSSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 VGKKVARSLVVGIHRLPLKGVLPGWRMLLEEKRERHETGTLQSCHHGNVTQWHRACSSLL 130 140 150 160 170 180 FLJ000 FSFLFFF ::::::: gi|104 FSFLFFF >>gi|169207429|ref|XP_001716032.1| PREDICTED: similar to (381 aa) initn: 1256 init1: 1256 opt: 1256 Z-score: 1660.9 bits: 315.0 E(): 8.3e-84 Smith-Waterman score: 1256; 100.000% identity (100.000% similar) in 187 aa overlap (1-187:195-381) 10 20 30 FLJ000 QFRIYYTHCYLNTHRKLLSSPRPLQSISRA :::::::::::::::::::::::::::::: gi|169 QAWGPQQCHHTMISGAISMSEMEDSQTLSRQFRIYYTHCYLNTHRKLLSSPRPLQSISRA 170 180 190 200 210 220 40 50 60 70 80 90 FLJ000 HIIVRPLFSSLQPMFRAYRAYHVYYITIRHKPKQLAAGLLNIATAEIFSGLEEEPLQMST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 HIIVRPLFSSLQPMFRAYRAYHVYYITIRHKPKQLAAGLLNIATAEIFSGLEEEPLQMST 230 240 250 260 270 280 100 110 120 130 140 150 FLJ000 NFSNFLVYGMKSLKLTALCSTIGLHDARGRVGKKVARSLVVGIHRLPLKGVLPGWRMLLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 NFSNFLVYGMKSLKLTALCSTIGLHDARGRVGKKVARSLVVGIHRLPLKGVLPGWRMLLE 290 300 310 320 330 340 160 170 180 FLJ000 EKRERHETGTLQSCHHGNVTQWHRACSSLLFSFLFFF ::::::::::::::::::::::::::::::::::::: gi|169 EKRERHETGTLQSCHHGNVTQWHRACSSLLFSFLFFF 350 360 370 380 >>gi|169207061|ref|XP_001718439.1| PREDICTED: similar to (404 aa) initn: 1256 init1: 1256 opt: 1256 Z-score: 1660.5 bits: 315.0 E(): 8.6e-84 Smith-Waterman score: 1256; 100.000% identity (100.000% similar) in 187 aa overlap (1-187:158-344) 10 20 30 FLJ000 QFRIYYTHCYLNTHRKLLSSPRPLQSISRA :::::::::::::::::::::::::::::: gi|169 QAWGPQQCHHTMISGAISMSEMEDSQTLSRQFRIYYTHCYLNTHRKLLSSPRPLQSISRA 130 140 150 160 170 180 40 50 60 70 80 90 FLJ000 HIIVRPLFSSLQPMFRAYRAYHVYYITIRHKPKQLAAGLLNIATAEIFSGLEEEPLQMST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 HIIVRPLFSSLQPMFRAYRAYHVYYITIRHKPKQLAAGLLNIATAEIFSGLEEEPLQMST 190 200 210 220 230 240 100 110 120 130 140 150 FLJ000 NFSNFLVYGMKSLKLTALCSTIGLHDARGRVGKKVARSLVVGIHRLPLKGVLPGWRMLLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 NFSNFLVYGMKSLKLTALCSTIGLHDARGRVGKKVARSLVVGIHRLPLKGVLPGWRMLLE 250 260 270 280 290 300 160 170 180 FLJ000 EKRERHETGTLQSCHHGNVTQWHRACSSLLFSFLFFF ::::::::::::::::::::::::::::::::::::: gi|169 EKRERHETGTLQSCHHGNVTQWHRACSSLLFSFLFFFLRRNLGGKKFLVETSSTFLCPPQ 310 320 330 340 350 360 gi|169 LGQSPPMCSADALRKSCLFYAVLLGSWGAGVGTSAGR 370 380 390 400 >>gi|119368573|sp|Q9H7N3.2|CN056_HUMAN RecName: Full=Unc (144 aa) initn: 964 init1: 964 opt: 964 Z-score: 1280.9 bits: 243.3 E(): 1.2e-62 Smith-Waterman score: 964; 100.000% identity (100.000% similar) in 144 aa overlap (44-187:1-144) 20 30 40 50 60 70 FLJ000 HRKLLSSPRPLQSISRAHIIVRPLFSSLQPMFRAYRAYHVYYITIRHKPKQLAAGLLNIA :::::::::::::::::::::::::::::: gi|119 MFRAYRAYHVYYITIRHKPKQLAAGLLNIA 10 20 30 80 90 100 110 120 130 FLJ000 TAEIFSGLEEEPLQMSTNFSNFLVYGMKSLKLTALCSTIGLHDARGRVGKKVARSLVVGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TAEIFSGLEEEPLQMSTNFSNFLVYGMKSLKLTALCSTIGLHDARGRVGKKVARSLVVGI 40 50 60 70 80 90 140 150 160 170 180 FLJ000 HRLPLKGVLPGWRMLLEEKRERHETGTLQSCHHGNVTQWHRACSSLLFSFLFFF :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HRLPLKGVLPGWRMLLEEKRERHETGTLQSCHHGNVTQWHRACSSLLFSFLFFF 100 110 120 130 140 187 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 14:58:46 2009 done: Fri Feb 27 15:03:15 2009 Total Scan time: 641.160 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]