# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00038.fasta.huge -Q ../query/FLJ00038.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00038, 199 aa vs ./tmplib.10216 library 2210795 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.3154+/-0.00588; mu= 20.2388+/- 0.398 mean_var=199.8978+/-44.362, 0's: 0 Z-trim: 0 B-trim: 0 in 0/40 Lambda= 0.090713 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1608 ( 872 res) fj20142 ( 872) 120 27.5 2.3 FLJ00224 ( 896 res) sj06244 ( 896) 120 27.5 2.3 KIAA1205 ( 1217 res) fg03511a (1217) 121 27.9 2.4 KIAA1877 ( 534 res) pg00264 ( 534) 116 26.5 2.7 KIAA0787 ( 557 res) hk05521s1 ( 557) 115 26.4 3 KIAA0341 ( 546 res) hg01438 ( 546) 114 26.3 3.3 KIAA0229 ( 1180 res) ha02570 (1180) 114 26.9 4.5 FLJ00184 ( 580 res) sj01836 ( 580) 108 25.5 5.8 KIAA1172 ( 929 res) hj03919(revised) ( 929) 109 26.1 6.4 KIAA1762 ( 1460 res) fh27937(revised) (1460) 110 26.6 7 KIAA0434 ( 1571 res) hh02165 (1571) 108 26.4 8.6 KIAA1522 ( 1044 res) fh14706(revised) (1044) 106 25.8 8.8 KIAA1741 ( 1777 res) fh23254 (1777) 108 26.5 9 FLJ00201 ( 705 res) sj04110 ( 705) 104 25.2 9 KIAA1849 ( 1114 res) fg05386(revised) (1114) 104 25.6 11 KIAA1471 ( 1421 res) fj02383s1 (1421) 103 25.7 13 FLJ00277 ( 357 res) sh01540 ( 357) 96 23.5 14 KIAA0838 ( 677 res) hk03864 ( 677) 98 24.4 15 KIAA1869 ( 935 res) hh01800 ( 935) 99 24.8 16 KIAA0665 ( 760 res) hk02064 ( 760) 98 24.5 16 FLJ00173 ( 1269 res) sj00667 (1269) 100 25.2 16 KIAA0561 ( 1308 res) hh01676 (1308) 100 25.2 16 KIAA0257 ( 1805 res) ha07065 (1805) 101 25.6 17 KIAA1086 ( 902 res) hj08218 ( 902) 98 24.6 17 KIAA1668 ( 791 res) fh11717 ( 791) 96 24.2 19 KIAA1639 ( 2584 res) af14886 (2584) 101 25.9 20 KIAA1375 ( 546 res) fj04426 ( 546) 94 23.7 20 KIAA0079 ( 1102 res) ha03543 (1102) 96 24.5 22 KIAA0653 ( 558 res) hk01718 ( 558) 93 23.5 22 KIAA1306 ( 1154 res) fh05845 (1154) 96 24.6 23 FLJ00220 ( 503 res) sj05828 ( 503) 92 23.3 23 KIAA1535 ( 711 res) fk12792 ( 711) 93 23.8 25 KIAA0863 ( 1181 res) hk06535 (1181) 95 24.5 25 KIAA0886 ( 1233 res) hk07722 (1233) 95 24.5 25 KIAA1737 ( 400 res) pj00125 ( 400) 90 22.9 26 FLJ00091 ( 170 res) as00091 ( 170) 86 21.6 26 FLJ00016 ( 349 res) as00016 ( 349) 89 22.6 27 KIAA1883 ( 1480 res) fh02249 (1480) 95 24.7 27 KIAA1862 ( 1070 res) aj00563 (1070) 93 24.1 29 KIAA0950 ( 343 res) hj05289 ( 343) 88 22.5 29 KIAA1875 ( 922 res) pf00972 ( 922) 92 23.9 30 KIAA2032 ( 952 res) eh00720 ( 952) 92 23.9 30 KIAA1296 ( 815 res) fg03576 ( 815) 91 23.6 31 FLJ00361 ( 366 res) sh04352 ( 366) 87 22.4 32 KIAA0179 ( 762 res) ha02738 ( 762) 90 23.4 33 KIAA0815 ( 1640 res) sh06087 (1640) 93 24.5 34 FLJ00259 ( 659 res) sh04102 ( 659) 89 23.2 34 KIAA0306 ( 1451 res) hg00063 (1451) 92 24.3 35 KIAA1142 ( 467 res) hh05864 ( 467) 87 22.6 36 FLJ00417 ( 600 res) sj06336 ( 600) 88 23.0 36 >>KIAA1608 ( 872 res) fj20142 (872 aa) initn: 79 init1: 79 opt: 120 Z-score: 99.9 bits: 27.5 E(): 2.3 Smith-Waterman score: 126; 28.652% identity (49.438% similar) in 178 aa overlap (20-178:547-715) 10 20 30 40 FLJ000 GRAARRHHDSCEDAALPGRSDLCRAPHPARPAARGGRPADGGCPA---V :: ..: :. . :: : : KIAA16 AASPEKPSALLGNSLALPRRPQNRDSILNPSDKEEVPTPTLGSITIPRPQGRKTPELGIV 520 530 540 550 560 570 50 60 70 80 90 FLJ000 PAEGLWR--HLQQVGAA---THPHLM----RGPSLSWAI-PATHPLGAAPLGNP-GPGEP : . : .:: .::: . .:. : .:: .. :.. : : . : .: .:: KIAA16 PPPPIPRPAKLQAAGAALGDVSERLQTDRDRRAALSPGLLPGVVPQGPTELLQPLSPG-- 580 590 600 610 620 630 100 110 120 130 140 150 FLJ000 IWLPCVGGAEVRAQLGSF----YSWESESSLPSTPLSLLVSCGGSALTTH-AFPPIGGPI : ..:. : :. . .: : :.::: : . :. . .: . .::: : : KIAA16 ---PGAAGTSSDALLALLDPLSTAW-SGSTLPSRPATPNVA---TPFTPQFSFPPAGTPT 640 650 660 670 680 160 170 180 190 FLJ000 PSRFPAANKYLPSSARVQGSVGISIYPATDKATYLSTWSAHSGRRERPK : : : ..:: . .. . :: KIAA16 PFPQPPLNPFVPSMPAAPPTLPLVSTPAGPFGAPPASLGPAFASGLLLSSAGFCAPHRSQ 690 700 710 720 730 740 >>FLJ00224 ( 896 res) sj06244 (896 aa) initn: 79 init1: 79 opt: 120 Z-score: 99.8 bits: 27.5 E(): 2.3 Smith-Waterman score: 126; 28.652% identity (49.438% similar) in 178 aa overlap (20-178:571-739) 10 20 30 40 FLJ000 GRAARRHHDSCEDAALPGRSDLCRAPHPARPAARGGRPADGGCPA---V :: ..: :. . :: : : FLJ002 AASPEKPSALLGNSLALPRRPQNRDSILNPSDKEEVPTPTLGSITIPRPQGRKTPELGIV 550 560 570 580 590 600 50 60 70 80 90 FLJ000 PAEGLWR--HLQQVGAA---THPHLM----RGPSLSWAI-PATHPLGAAPLGNP-GPGEP : . : .:: .::: . .:. : .:: .. :.. : : . : .: .:: FLJ002 PPPPIPRPAKLQAAGAALGDVSERLQTDRDRRAALSPGLLPGVVPQGPTELLQPLSPG-- 610 620 630 640 650 100 110 120 130 140 150 FLJ000 IWLPCVGGAEVRAQLGSF----YSWESESSLPSTPLSLLVSCGGSALTTH-AFPPIGGPI : ..:. : :. . .: : :.::: : . :. . .: . .::: : : FLJ002 ---PGAAGTSSDALLALLDPLSTAW-SGSTLPSRPATPNVA---TPFTPQFSFPPAGTPT 660 670 680 690 700 710 160 170 180 190 FLJ000 PSRFPAANKYLPSSARVQGSVGISIYPATDKATYLSTWSAHSGRRERPK : : : ..:: . .. . :: FLJ002 PFPQPPLNPFVPSMPAAPPTLPLVSTPAGPFGAPPASLGPAFASGLLLSSAGFCAPHRSQ 720 730 740 750 760 770 >>KIAA1205 ( 1217 res) fg03511a (1217 aa) initn: 120 init1: 57 opt: 121 Z-score: 99.6 bits: 27.9 E(): 2.4 Smith-Waterman score: 121; 28.467% identity (51.825% similar) in 137 aa overlap (44-180:496-624) 20 30 40 50 60 70 FLJ000 AALPGRSDLCRAPHPARPAARGGRPADGGCPAVPAEGLWRHLQQVGAATHPHLMRGPSLS :.:::.:: . . :. :: . .:. KIAA12 FLDFLKSGKRHPPLYQAGLTPPLSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLG 470 480 490 500 510 520 80 90 100 110 120 130 FLJ000 WAIPATHPLGAAPLGNPGPGEPIWLPCVGGAEVRAQLGSFYSWESESSLPSTPLSLLVSC :. :.. : . :: :.: . . . :. : :: : : .: . :. .: KIAA12 GALEAAESEGLG-LGCPSPCKRLDEELKRNLET---LPSFSSDEEDSVAKNRDLQESISS 530 540 550 560 570 580 140 150 160 170 180 190 FLJ000 GGSALTTHAFPPIGGPIPSRFPAANKYLPSSARVQGSVGISIYPATDKATYLSTWSAHSG . ::: ::..:: . : . :..: : : . :... KIAA12 AISALDD---PPLAGPKDTSTPDGPPLAPAAA-VPGPPPLPGLPSANSNGTPEPPLLEEK 590 600 610 620 630 FLJ000 RRERPK KIAA12 PPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPP 640 650 660 670 680 690 >>KIAA1877 ( 534 res) pg00264 (534 aa) initn: 122 init1: 58 opt: 116 Z-score: 98.6 bits: 26.5 E(): 2.7 Smith-Waterman score: 121; 24.138% identity (48.276% similar) in 174 aa overlap (46-199:57-225) 20 30 40 50 60 70 FLJ000 LPGRSDLCRAPHPARPAARGGRPADGGCPAVPAEGLWRHLQQVGAATHPHLMRGPSLSWA .:..: : . .::: .: : . : KIAA18 LFLLIFIYFTDSNPAEPVPSSLSFLETRRLLPVQGKQRAI--MGAAHEPSPPGGLDARQA 30 40 50 60 70 80 80 90 100 110 120 130 FLJ000 IPATHPLGAAPLGNPGPGE-PIWLPCVGGAEVRAQLGSFYSWESESSLPSTPLSLLVSCG .: .:: :. . :::. : : : . ..: . .:.:.. . . . : KIAA18 LPRAHPAGSF---HAGPGDLQKWAQSQDGFEHKEFFSSQVGRKSQSAFYPEDDDYFFAAG 90 100 110 120 130 140 140 150 160 170 FLJ000 GSALTTHA-----FPPIGGPIPSR--FPAAN---KYLPSSARVQ--------GSVGISIY . .:. :: : : : . ::::. . . . : : :. : .: KIAA18 QPGWHSHTQGTLGFPSPGEPGPREGAFPAAQVQRRRVKKRHRRQRRSHVLEEGDDGDRLY 150 160 170 180 190 200 180 190 FLJ000 PATDKATYLSTWSAH-SGRRERPK . ..: :... :.. :. KIAA18 SSMSRAFLYRLWKGNVSSKMLNPRLQKAMKDYLTANKHGVRFRGKREAGLSRAQLLCQLR 210 220 230 240 250 260 >>KIAA0787 ( 557 res) hk05521s1 (557 aa) initn: 112 init1: 89 opt: 115 Z-score: 97.7 bits: 26.4 E(): 3 Smith-Waterman score: 115; 36.170% identity (59.574% similar) in 47 aa overlap (24-68:205-251) 10 20 30 40 50 FLJ000 GRAARRHHDSCEDAALPGRSDLCRAPHPARPAARGGRPADGGC--PAVPAEGL .: : :: :: ::: ::: : : : . KIAA07 GSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQV 180 190 200 210 220 230 60 70 80 90 100 110 FLJ000 WRHLQQVGAATHPHLMRGPSLSWAIPATHPLGAAPLGNPGPGEPIWLPCVGGAEVRAQLG .... . ::.... KIAA07 YQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYF 240 250 260 270 280 290 >>KIAA0341 ( 546 res) hg01438 (546 aa) initn: 69 init1: 46 opt: 114 Z-score: 97.1 bits: 26.3 E(): 3.3 Smith-Waterman score: 118; 29.670% identity (48.901% similar) in 182 aa overlap (6-171:91-263) 10 20 FLJ000 GRAARRHHDSCED---AALP--GRSDLCRA-PHPA :.:. : ..:: :: : :: : KIAA03 LHLPKKDSKSTKNTKRAPRNEPADYATLYYREHSRAGDFSKTSLPERGRFDKCRIRPSVF 70 80 90 100 110 120 30 40 50 60 70 80 FLJ000 RPAARGGRPADGGCPAVPAEG--LWRHLQQVGA-ATHPHLMRGPSLSWAIPATHPLGAAP .:.: .:. . . .: ::: .. . : :: : :: : : .. : : KIAA03 KPTAGNGKGFLSMQSLASHKGQKLWRSNGSLHTLACHPPLSPGPRASQA--RAQLLHALS 130 140 150 160 170 90 100 110 120 130 140 FLJ000 LGNPGPGEPIWLPCVGGAEVRAQLGSFYSWESESSLP-STPLSLLVSCGGSALTTHAFPP : . :: :: : .. . .. ::: . . : :. :. : ::: . : KIAA03 LDEGGP-EP--EPSLSDS---SSGGSFGRSPGTGPSPFSSSLGHLNHLGGSLDRASQGPK 180 190 200 210 220 230 150 160 170 180 190 FLJ000 IGGPIPSRF------PAANKYLPSSARVQGSVGISIYPATDKATYLSTWSAHSGRRERPK .:: :. . : .. :::. .:.: KIAA03 EAGP-PAVLSCLPEPPPPYEFSCSSAEEMGAVLPETCEELKRGLGDEDGSNPFTQVLEER 240 250 260 270 280 290 KIAA03 QRLWLAELKRLYVERLHEVTQKAERSERNLQLQLFMAQQEQRRLRKELRAQQGLAPEPRA 300 310 320 330 340 350 >>KIAA0229 ( 1180 res) ha02570 (1180 aa) initn: 86 init1: 86 opt: 114 Z-score: 94.7 bits: 26.9 E(): 4.5 Smith-Waterman score: 114; 35.185% identity (62.963% similar) in 54 aa overlap (1-54:924-976) 10 20 30 FLJ000 GRAARRHHDSCEDAALPGRSDLCRAPHPAR : ..::.::: .: : :.:.. : . : KIAA02 RCQDLLSQTSSPLSQNDSCTGRSADLLLPPGDTGRRRHDSLHDPAAPSRAERFRIQEEHR 900 910 920 930 940 950 40 50 60 70 80 90 FLJ000 PAARGGRPADGGCPAVPAEGLWRHLQQVGAATHPHLMRGPSLSWAIPATHPLGAAPLGNP : :: . . : .:... :.: KIAA02 EAKLTLRPPSLAAPYAPVQS-WQHQPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACA 960 970 980 990 1000 1010 >>FLJ00184 ( 580 res) sj01836 (580 aa) initn: 93 init1: 69 opt: 108 Z-score: 92.7 bits: 25.5 E(): 5.8 Smith-Waterman score: 129; 33.333% identity (50.000% similar) in 114 aa overlap (21-122:193-302) 10 20 30 40 FLJ000 GRAARRHHDSCEDAALPGRSDLCRAPHPARPAARGGRPA---DGGCPAVP :: .: :. .:: : : : :.. FLJ001 ETTQARTEAQDLCRASPEPPGPESSSRWLDDLLASPPPSGGGARRGAGAELKDTQSPSTC 170 180 190 200 210 220 50 60 70 80 90 FLJ000 AEGL--W--RHLQ-QVGAATHPHLMR-GPSLSWAIPATHPLG---AAPLGNPGPGEPIWL .::: : . :: . : . :. .:: :: :.. : :.: :.:: :: : FLJ001 SEGLLGWSQKDLQSEFGITGDPQPSSFSPS-SWCQGASQDYGLGGASPRGDPGLGERDWT 230 240 250 260 270 280 100 110 120 130 140 150 FLJ000 PCVGGAEVRAQLGSFYSWESESSLPSTPLSLLVSCGGSALTTHAFPPIGGPIPSRFPAAN : . : :: : :. .. FLJ001 SKYGQG---AGEGSTREWASRCGIGQEEMEASSSQDQSKVSAPGVLTAQDRVVGKPAQLG 290 300 310 320 330 >>KIAA1172 ( 929 res) hj03919(revised) (929 aa) initn: 127 init1: 66 opt: 109 Z-score: 91.9 bits: 26.1 E(): 6.4 Smith-Waterman score: 109; 26.506% identity (44.578% similar) in 166 aa overlap (15-172:634-783) 10 20 30 40 FLJ000 GRAARRHHDSCEDAALPGRSDLCRAPHPARPAARGGRPADGGCP : :: : : : :. : . : : KIAA11 VTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQR-P-PGMPPPHLQR-----FP 610 620 630 640 650 50 60 70 80 90 FLJ000 AVPAEGLWRHLQQVG--------AATHPHLMRGPSLSWAIPATHPLGAAPLGNPGPGEPI .: . . :... : : :: :.:: . : ..: : ::.:::: : KIAA11 LMPPRPMPPHMMHRGPPPGPGGFAMPPPHGMKGP-FPPHGPFVRPGGMPGLGGPGPG-P- 660 670 680 690 700 710 100 110 120 130 140 150 FLJ000 WLPCVGGAEVRAQLGSFYSWESESSLPSTPLSLLVSCGGSALTTHAFPPIGGPIPSRFPA :: : : . . ... :..: . . . .. :: :..: KIAA11 -----GGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQ-PQQFRN 720 730 740 750 760 160 170 180 190 FLJ000 ANKYLPSSARVQGSVGISIYPATDKATYLSTWSAHSGRRERPK :. .:.: : : KIAA11 DNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDRDNSNRDRREWGRRSPDRDRHRD 770 780 790 800 810 820 >>KIAA1762 ( 1460 res) fh27937(revised) (1460 aa) initn: 104 init1: 59 opt: 110 Z-score: 91.2 bits: 26.6 E(): 7 Smith-Waterman score: 110; 28.800% identity (52.800% similar) in 125 aa overlap (60-183:1082-1198) 30 40 50 60 70 80 FLJ000 RPAARGGRPADGGCPAVPAEGLWRHLQQVGAATHPHLMRGPSLSWAIPATHPLGAAPLGN : : ...: . ::. :::::: KIAA17 HLFSRQHLAKLKEAVRAQLKSESKCYDLAPAPEAPPALKAPPAT--TPASMPLGAAPTL- 1060 1070 1080 1090 1100 90 100 110 120 130 140 FLJ000 PGPGEPIWLPCVGGAEVRAQLGSFYSWESESSLPSTPLSLLVSCGGSALTTHAFPPIGGP : . :. : : : .. ::.. ..: . : :.: .: .. .... : : : KIAA17 PRLA-PVLLS--GPALAQPPLGNLAPFNSGPAASSGLLGLATSVLPTTTVVQTAGP-GRP 1110 1120 1130 1140 1150 1160 150 160 170 180 190 FLJ000 IPSRFPAANKYLPSSARVQGSV-GISIYPATDKATYLSTWSAHSGRRERPK .:.: : .. :.: . : : : ::.. KIAA17 LPQR-PMPDQTNTSTAGTTDPVPGPPTEPLGDKVSSERKPVAGPTSSSNDALKNLKALKT 1170 1180 1190 1200 1210 1220 KIAA17 TVPALLGGQFLPFPLPPAGGTAPPAVFGPQLQGAYFQQLYGMKKGLFPMNPMIPQTLIGL 1230 1240 1250 1260 1270 1280 199 residues in 1 query sequences 2210795 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:29:08 2009 done: Fri Feb 27 10:29:08 2009 Total Scan time: 0.370 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]