# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00048.fasta.huge -Q ../query/FLJ00048.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00048, 146 aa
vs ./tmplib.10216 library
2210848 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 5.6798+/-0.00514; mu= 9.9407+/- 0.348
mean_var=156.3641+/-33.920, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40
Lambda= 0.102567
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
KIAA0149 ( 830 res) ha01221 ( 830) 124 28.9 0.57
FLJ00084 ( 641 res) as00084 ( 641) 103 25.7 4.3
FLJ00248 ( 501 res) sj08681 ( 501) 100 25.1 5
KIAA1862 ( 1070 res) aj00563 (1070) 104 26.1 5.2
KIAA1884 ( 946 res) fh04567 ( 946) 98 25.2 8.9
KIAA1211 ( 803 res) fh00041 ( 803) 96 24.8 10
KIAA1149 ( 532 res) fg04087 ( 532) 91 23.8 13
FLJ00169 ( 432 res) sh07709 ( 432) 89 23.4 14
KIAA0582 ( 760 res) fh15957 ( 760) 92 24.2 15
KIAA0660 ( 490 res) hk01902 ( 490) 89 23.5 15
KIAA0527 ( 768 res) hg02246 ( 768) 91 24.0 16
KIAA0304 ( 2415 res) af07172 (2415) 97 25.6 17
KIAA0775 ( 639 res) hk05255 ( 639) 89 23.6 18
KIAA0711 ( 661 res) hg00358 ( 661) 88 23.5 20
KIAA1357 ( 836 res) fj01906 ( 836) 89 23.8 21
KIAA1029 ( 1015 res) fh00363 (1015) 90 24.0 21
KIAA0056 ( 1507 res) ha01062 (1507) 92 24.6 22
FLJ00261 ( 1651 res) sh06537 (1651) 92 24.6 23
KIAA1471 ( 1421 res) fj02383s1 (1421) 91 24.4 23
KIAA0194 ( 1435 res) ha02703 (1435) 91 24.4 23
KIAA0341 ( 546 res) hg01438 ( 546) 85 22.9 24
KIAA1306 ( 1154 res) fh05845 (1154) 89 24.0 25
FLJ00328 ( 238 res) sj02853 ( 238) 79 21.5 28
FLJ00214 ( 322 res) sj05155 ( 322) 80 21.9 30
KIAA1738 ( 1127 res) pj00192s1 (1127) 87 23.7 30
FLJ00366 ( 282 res) sh05203 ( 282) 79 21.6 31
KIAA1547 ( 863 res) fh14154 ( 863) 85 23.2 32
KIAA1295 ( 550 res) fg01760 ( 550) 82 22.5 33
KIAA0929 ( 1663 res) hh03374 (1663) 88 24.0 34
KIAA2018 ( 1685 res) ha04734 (1685) 88 24.0 35
FLJ00153 ( 497 res) sh06127 ( 497) 81 22.3 35
FLJ00008 ( 217 res) as00008 ( 217) 76 21.0 36
FLJ00099 ( 217 res) as00099 ( 217) 76 21.0 36
FLJ00358 ( 217 res) sh03894 ( 217) 76 21.0 36
FLJ00173 ( 1269 res) sj00667 (1269) 86 23.6 36
KIAA0616 ( 634 res) hg03623 ( 634) 82 22.6 36
KIAA1330 ( 945 res) fh15188 ( 945) 84 23.1 37
FLJ00179 ( 194 res) sj01277 ( 194) 75 20.8 37
KIAA1881 ( 1348 res) ah02284 (1348) 86 23.6 37
FLJ00184 ( 580 res) sj01836 ( 580) 81 22.4 38
KIAA1587 ( 991 res) fj08327 ( 991) 84 23.1 38
FLJ00318 ( 127 res) sh07374 ( 127) 72 20.1 40
KIAA0363 ( 1522 res) hh00103 (1522) 86 23.7 40
KIAA1514 ( 1598 res) fh00815(revised) (1598) 86 23.7 41
KIAA0815 ( 1640 res) sh06087 (1640) 86 23.7 42
KIAA1050 ( 829 res) hh03308 ( 829) 82 22.7 42
KIAA0279 ( 2854 res) ff05612 (2854) 89 24.5 42
FLJ00037 ( 145 res) as00037 ( 145) 72 20.2 43
KIAA1607 ( 1270 res) fj11118 (1270) 84 23.3 44
KIAA1375 ( 546 res) fj04426 ( 546) 79 22.0 45
>>KIAA0149 ( 830 res) ha01221 (830 aa)
initn: 67 init1: 54 opt: 124 Z-score: 110.7 bits: 28.9 E(): 0.57
Smith-Waterman score: 124; 27.273% identity (43.939% similar) in 132 aa overlap (23-144:269-397)
10 20 30 40 50
FLJ000 TLSSLQECVGREVKVLLSMFPKKARHPGAPALGICTRQPKSTPGTCCCFPCS
: .: .: : : . :: : ::
KIAA01 CPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWNGTQCQQPCL
240 250 260 270 280 290
60 70 80 90 100
FLJ000 PGRKPSGLSLLLRTPEAAPRGQRLE-DVHHRPECRP----PESPGPREKTNVGEAVGSEP
:: : : . :. .:. : :. : .: : :. : . :: ::
KIAA01 PGT--FGESCEQQCPHCR-HGEACEPDTGHCQRCDPGWLGPRCEDPCPTGTFGEDCGSTC
300 310 320 330 340 350
110 120 130 140
FLJ000 RTVSRRYLNSLKNKLSSEA--WRKSCQ---PVTLSGSGTQVPEG
: . ... . : : ::. :. . :.. .::
KIAA01 PTCVQGSCDTVTGDCVCSAGYWGPSCNASCPAGFHGNNCSVPCECPEGLCHPVSGSCQPG
360 370 380 390 400 410
KIAA01 SGSRDTALIVGSLVPLLLLFLGLACCACCCWAPRSDLKDRPARDGATVSRMKLQVWGTLT
420 430 440 450 460 470
>>FLJ00084 ( 641 res) as00084 (641 aa)
initn: 68 init1: 68 opt: 103 Z-score: 95.1 bits: 25.7 E(): 4.3
Smith-Waterman score: 104; 28.916% identity (49.398% similar) in 83 aa overlap (27-107:510-582)
10 20 30 40 50
FLJ000 TLSSLQECVGREVKVLLSMFPKKARHPGAPALGICTRQPKSTPGTCCCFPCS--PG
:..:: ...:. ::: : . :.
FLJ000 GSPSETPGPSPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPA
480 490 500 510 520 530
60 70 80 90 100 110
FLJ000 RKPSGLSLLLRTPEAAPRGQRLEDVHHRPECRPPESPGPREKTNVGEAVGSEPRTVSRRY
. :: .:: .: : .. : : :.:::: .:. . :
FLJ000 KTPS------ETPGPSPAGPTRDE----PAESPSETPGPRPAGPAGDEPAESPSETPGPR
540 550 560 570 580
120 130 140
FLJ000 LNSLKNKLSSEAWRKSCQPVTLSGSGTQVPEG
FLJ000 PAGPAGDEPAESPSETPGPSPAGPTRDEPAKAGEAAELQDAEVESSAKSGKP
590 600 610 620 630 640
>>FLJ00248 ( 501 res) sj08681 (501 aa)
initn: 75 init1: 45 opt: 100 Z-score: 93.8 bits: 25.1 E(): 5
Smith-Waterman score: 100; 33.784% identity (50.000% similar) in 74 aa overlap (31-94:223-290)
10 20 30 40 50
FLJ000 TLSSLQECVGREVKVLLSMFPKKARHPGAPALGI-CTRQP----KSTPGTCCCF--PCSP
.::. :::.: ... : : : ::
FLJ002 RSRGGTATGGLHAFTTRSTEASPLSLLEIGSLGLPCTRHPWAPGEGAWGRCGCSLSPCPS
200 210 220 230 240 250
60 70 80 90 100 110
FLJ000 GRKPSGLSLLLRTPEAAPRGQRLEDVHHRP---ECRPPESPGPREKTNVGEAVGSEPRTV
. .: . :.: : : : :: : .:: .: ::
FLJ002 SPQPPS-----RSPSWIWREQLLLP-HHLPGPATEQPPGAPDPRSPQVAWEVAPSRMTPL
260 270 280 290 300
120 130 140
FLJ000 SRRYLNSLKNKLSSEAWRKSCQPVTLSGSGTQVPEG
FLJ002 APWDPKYEAKAGPRPVWGANCSSGASFSGRTLCHPSFWPLYEAASGRGLRPVAPATGHWN
310 320 330 340 350 360
>>KIAA1862 ( 1070 res) aj00563 (1070 aa)
initn: 92 init1: 53 opt: 104 Z-score: 93.5 bits: 26.1 E(): 5.2
Smith-Waterman score: 111; 26.087% identity (44.348% similar) in 115 aa overlap (8-118:654-753)
10 20 30
FLJ000 TLSSLQECVGREVKVLLSMFPKKARHPGAPALGICTR
:. .. .: . : . :.:.
KIAA18 QRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILPVRPLRFACVGGPS------
630 640 650 660 670
40 50 60 70 80 90
FLJ000 QPKSTPGTCCCFPCSPGRKPSGLSLLLRTPEAAPRGQRLEDVHHRPECRPP----ESPGP
:. .::. : : :. : : . : : .:: : :.:: ::
KIAA18 -PSPSPGSSSSFSGSEGEDPRPEPELWK-PLPQER-DRL------PSCKPPVPLSPCPGG
680 690 700 710 720
100 110 120 130 140
FLJ000 REKTNVGEAVGSEPRTVSRRYLNSLKNKLSSEAWRKSCQPVTLSGSGTQVPEG
. : . : .:: . :: ..:
KIAA18 TPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGLELGHGRPR
730 740 750 760 770 780
>>KIAA1884 ( 946 res) fh04567 (946 aa)
initn: 75 init1: 47 opt: 98 Z-score: 89.3 bits: 25.2 E(): 8.9
Smith-Waterman score: 98; 29.730% identity (50.000% similar) in 74 aa overlap (27-100:593-661)
10 20 30 40 50
FLJ000 TLSSLQECVGREVKVLLSMFPKKARHPGAPALGICTRQPKSTPGTCCCFPCSPGRK
::.: .:: . . :. : :. :
KIAA18 GSPRRFCQSDGTWSGTQPSCIDPTLTTCADPGVPQFGIQNNSQGYQVGSTVLFRCQKGYL
570 580 590 600 610 620
60 70 80 90 100 110
FLJ000 PSGLSLLLRTPEAAPRGQRLEDVHHRPECRPPESPGPREKTNVGEAVGSEPRTVSRRYLN
.: . :. . : . : : .:: ::.: ..:::
KIAA18 LQGSTTRTCLPNLTWSGTPPDCVPH--HCRQPETP---THANVGALDLPSMGYTLIYSCQ
630 640 650 660 670
120 130 140
FLJ000 SLKNKLSSEAWRKSCQPVTLSGSGTQVPEG
KIAA18 EGFSLKGGSEHRTCKADGSWTGKPPICLEVRPNGRPINTAREPPLTQALIPGDVFAKNSL
680 690 700 710 720 730
>>KIAA1211 ( 803 res) fh00041 (803 aa)
initn: 62 init1: 62 opt: 96 Z-score: 88.4 bits: 24.8 E(): 10
Smith-Waterman score: 96; 30.769% identity (47.436% similar) in 78 aa overlap (39-113:535-609)
10 20 30 40 50 60
FLJ000 VGREVKVLLSMFPKKARHPGAPALGICTRQPKSTPGTCCCFPCSPGRKPSGLSLLLRT--
:: : : : : .: . :: :
KIAA12 GPPPASSQTPAPEHDKAANKMPLAQKPALAPKPTSQTPPASPLSKLSRPYLVELLSRRAG
510 520 530 540 550 560
70 80 90 100 110 120
FLJ000 -PEAAPRGQRLEDVHHRPECRPPESPGPREKTNVGEAVGSEPRTVSRRYLNSLKNKLSSE
:. : :: .. . ::: :::.:. :. : ... :.
KIAA12 RPDPEPSEPSKED-QESSDRRPPSPPGPEERK--GQKRDEEEEATERKPASPPLPATQQE
570 580 590 600 610 620
130 140
FLJ000 AWRKSCQPVTLSGSGTQVPEG
KIAA12 KPSQTPEAGRKEKPMLQSRHSLDGSKLTEKVETAQPLWITLALQKQKGFREQQATREERK
630 640 650 660 670 680
>>KIAA1149 ( 532 res) fg04087 (532 aa)
initn: 84 init1: 60 opt: 91 Z-score: 86.3 bits: 23.8 E(): 13
Smith-Waterman score: 91; 35.484% identity (46.774% similar) in 62 aa overlap (39-94:33-88)
10 20 30 40 50 60
FLJ000 VGREVKVLLSMFPKKARHPGAPALGICTRQPKSTPGTCC------CFPCSPGRKPSGLSL
:: ::.:: :.: .:. ::
KIAA11 TSTTQTWGQAPGTDVGQCEPRGPEGRGPPWPKPCPGSCCGWARECCLPTAPSTA-SGCPC
10 20 30 40 50 60
70 80 90 100 110 120
FLJ000 LLRTPEAAPRGQRLEDVHHRPECRPPESPGPREKTNVGEAVGSEPRTVSRRYLNSLKNKL
. .:: : :: : . :: :: :
KIAA11 AA-AWGGAPLGLRLP----RETDEEPEEPGRRGSFVEMVDNLRGKSGQGYYVEMTVGSPP
70 80 90 100 110
130 140
FLJ000 SSEAWRKSCQPVTLSGSGTQVPEG
KIAA11 QTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELGTDL
120 130 140 150 160 170
>>FLJ00169 ( 432 res) sh07709 (432 aa)
initn: 86 init1: 59 opt: 89 Z-score: 85.7 bits: 23.4 E(): 14
Smith-Waterman score: 89; 27.473% identity (48.352% similar) in 91 aa overlap (23-113:47-134)
10 20 30 40 50
FLJ000 TLSSLQECVGREVKVLLSMFPKKARHPGAPALGICTRQPKSTPGTCCCFPCS
. :.::.::::. . : : . :
FLJ001 SSQGFGAGCAGVGPPGTGRALNRHRCGDWSRRRKPGSPALGVGEGRSFSRDGDG--YWAS
20 30 40 50 60 70
60 70 80 90 100 110
FLJ000 PGRKPSGLSLLLRTPEAAPRGQRLEDVHHRPECRPPESPGPREKTNVGEAVGSEPRTVSR
:: :. .: : :. : .. . .: : . .: .:. . :. : :
FLJ001 PGPGPARATLGAR-PRPALGASAQARLLRRQPAAPWLTSAPASARGVAAGPGDGGRKRER
80 90 100 110 120 130
120 130 140
FLJ000 RYLNSLKNKLSSEAWRKSCQPVTLSGSGTQVPEG
:
FLJ001 RRAGKTPRGTARPPHPKVARPARPLGRRVRTTGIGERRRSYYPGKSGEQWSGTLSHASVQ
140 150 160 170 180 190
>>KIAA0582 ( 760 res) fh15957 (760 aa)
initn: 87 init1: 65 opt: 92 Z-score: 85.5 bits: 24.2 E(): 15
Smith-Waterman score: 92; 28.125% identity (49.219% similar) in 128 aa overlap (24-139:170-288)
10 20 30 40 50
FLJ000 TLSSLQECVGREVKVLLSMFPKKARHPGAPALGICTRQPKS--TPGTCCCFP-
...: . .:. : : :: .::. :
KIAA05 LPRTTTICSGHDADTEDDPSLADLPQALDLSQQPHSSGLS-CLSQWKSVLSPGSAAQ-PS
140 150 160 170 180 190
60 70 80 90 100
FLJ000 -CSPGRKPSGLSLLLRTPEAAPRGQRLEDVHHRPECRPPESP------GPREKTNVGEAV
:: . . .: :: . .: ::: : : : :. : ::: . . .
KIAA05 SCSISASSTGSSLQGHQERAEPRGGSLAKVSSSLEPVVPQEPSSVVGLGPRPQWSPQPVF
200 210 220 230 240 250
110 120 130 140
FLJ000 -GSEPRTVSRRYLNSLKNKLSSEAWRKSC-QPVTLSGSGTQVPEG
:.. ..:: :. ...: : .: : .: :
KIAA05 SGGDASGLGRRRLS-----FQAEYW--ACVLPDSLPPSPDRHSPLWNPNKEYEDLLDYTY
260 270 280 290 300 310
KIAA05 PLRPGPQLPKHLDSRVPADPVLQDSGVDLDSFSVSPASTLKSPTNVSPNCPPAEATALPF
320 330 340 350 360 370
>>KIAA0660 ( 490 res) hk01902 (490 aa)
initn: 40 init1: 40 opt: 89 Z-score: 85.1 bits: 23.5 E(): 15
Smith-Waterman score: 89; 26.549% identity (46.903% similar) in 113 aa overlap (12-112:222-334)
10 20 30 40
FLJ000 TLSSLQECVGREVKVLLSMFPKKARHPGAPALGICTRQPKS
: : : . :.. : : ... . ::.
KIAA06 GIEEPLEESSHEPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAEPVSLPQEPPKA
200 210 220 230 240 250
50 60 70 80 90
FLJ000 ---TPGTCCCFPCSPGRKPSGLSLLLRTPEAAPRGQRLEDVHHRP----ECRPPESPG--
. : .: : . ::. ...: . :: . .:. .: : :: : ::
KIAA06 FSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQPRVEAKPEVQSQPPRVREQRPRERPGFP
260 270 280 290 300 310
100 110 120 130 140
FLJ000 ---PREKTNVGEAVGSEPRTVSRRYLNSLKNKLSSEAWRKSCQPVTLSGSGTQVPEG
:: . : :. : . :
KIAA06 PRGPRPGRGDMEQNDSDNRRIIRYPDSHQLFVGNLPHDIDENELKEFFMSFGNVVELRIN
320 330 340 350 360 370
146 residues in 1 query sequences
2210848 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 10:30:43 2009 done: Fri Feb 27 10:30:43 2009
Total Scan time: 0.330 Total Display time: 0.020
Function used was FASTA [version 34.26.5 April 26, 2007]