# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00050.fasta.huge -Q ../query/FLJ00050.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00050, 270 aa vs ./tmplib.10216 library 2210724 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.4514+/-0.00553; mu= 14.7413+/- 0.374 mean_var=178.3868+/-39.282, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.096027 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0019 ( 838 res) ha00537 ( 838) 276 49.7 5.9e-07 KIAA2014 ( 1032 res) ff00951s1 (1032) 114 27.4 3.8 KIAA1343 ( 520 res) fj00420 ( 520) 107 26.0 5.2 FLJ00153 ( 497 res) sh06127 ( 497) 105 25.7 6.1 KIAA0910 ( 1315 res) hg02207s1 (1315) 108 26.8 7.6 FLJ00193 ( 491 res) sj02629 ( 491) 101 25.1 8.9 KIAA1322 ( 702 res) fh13826 ( 702) 102 25.5 9.8 KIAA0905 ( 1229 res) hk10341 (1229) 105 26.3 9.8 FLJ00065 ( 204 res) as00065 ( 204) 95 23.7 10 KIAA1249 ( 949 res) hh04184 ( 949) 102 25.7 11 KIAA1439 ( 561 res) hg01641b ( 561) 99 24.9 12 KIAA1908 ( 445 res) ah02604 ( 445) 97 24.5 12 KIAA0584 ( 738 res) hj00933 ( 738) 99 25.1 13 KIAA0771 ( 948 res) hk05113 ( 948) 100 25.4 14 KIAA1535 ( 711 res) fk12792 ( 711) 98 25.0 14 KIAA1983 ( 418 res) fk09737(revised) ( 418) 95 24.2 15 KIAA1159 ( 221 res) hj00357 ( 221) 91 23.2 15 KIAA1526 ( 963 res) fj04743(revised) ( 963) 98 25.2 17 KIAA0900 ( 503 res) hk09606s1 ( 503) 94 24.2 18 KIAA1772 ( 752 res) pj02583(revised) ( 752) 95 24.6 20 KIAA0992 ( 772 res) hk07554 ( 772) 95 24.6 20 KIAA1205 ( 1217 res) fg03511a (1217) 97 25.2 21 KIAA1481 ( 1380 res) fj05724 (1380) 97 25.3 23 KIAA1818 ( 1157 res) hg00622 (1157) 96 25.0 23 KIAA0502 ( 144 res) hh00007 ( 144) 84 21.9 24 KIAA0608 ( 775 res) hh00889b ( 775) 93 24.3 24 KIAA1802 ( 821 res) fj21631 ( 821) 93 24.4 25 KIAA1443 ( 573 res) hj01820b ( 573) 91 23.8 25 KIAA1075 ( 1505 res) hj06716s1 (1505) 96 25.2 26 KIAA0458 ( 1552 res) ef01252 (1552) 96 25.2 26 KIAA1011 ( 3541 res) ff02850 (3541) 100 26.3 28 FLJ00003 ( 235 res) as00003 ( 235) 85 22.4 28 KIAA0394 ( 417 res) hf00236 ( 417) 88 23.2 28 KIAA1688 ( 1094 res) fh26207 (1094) 93 24.6 29 KIAA2035 ( 1135 res) ff09201 (1135) 93 24.6 30 KIAA1330 ( 945 res) fh15188 ( 945) 92 24.3 30 KIAA0749 ( 678 res) hk04328 ( 678) 90 23.8 30 KIAA1628 ( 980 res) fh14247(revised) ( 980) 92 24.3 30 FLJ00052 ( 368 res) as00052 ( 368) 86 22.8 32 KIAA1261 ( 787 res) hh15855b ( 787) 90 23.9 33 KIAA1831 ( 663 res) hk00543 ( 663) 89 23.7 33 KIAA1055 ( 868 res) hh09512 ( 868) 90 24.0 34 KIAA0208 ( 748 res) ha02713 ( 748) 89 23.7 35 FLJ00376 ( 931 res) sh07947 ( 931) 90 24.0 36 KIAA1819 ( 1173 res) hh00456 (1173) 91 24.3 37 KIAA0269 ( 567 res) ha06751 ( 567) 87 23.3 37 FLJ00214 ( 322 res) sj05155 ( 322) 83 22.3 40 FLJ00126 ( 878 res) sh01242 ( 878) 88 23.7 42 KIAA1278 ( 1311 res) hg03689(revised) (1311) 90 24.3 43 KIAA1318 ( 1418 res) fh13683 (1418) 90 24.3 44 >>KIAA0019 ( 838 res) ha00537 (838 aa) initn: 235 init1: 176 opt: 276 Z-score: 218.1 bits: 49.7 E(): 5.9e-07 Smith-Waterman score: 313; 35.714% identity (62.088% similar) in 182 aa overlap (59-228:285-454) 30 40 50 60 70 80 FLJ000 HSRGLKPQWVLLRPPAPAWKGQVLPHLLSPKKSFGLTLRLWDVLILEGEQVLTAMAHASF . : :.::.::. :.:::.:::::... . KIAA00 FLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPFTLNLRIWDIYIFEGERVLTAMSYTIL 260 270 280 290 300 310 90 100 110 120 130 140 FLJ000 KIHREHLMKLSWSTVWEF-QERLSQSWALEDNSVLRNLQTSMKELTKKHWDLPSPGELER :.:..:::::: . :: :: :.... .::. :...:: :: :: . . ::: ::. .. KIAA00 KLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQLQISMTELKRAKLDLPEPGKEDE 320 330 340 350 360 370 150 160 170 180 190 200 FLJ000 GSSRVSPGIRPLCEGDRLALPSPPAQLQGLMPSAPQDKSLVLPQPGLTGL----SPWRR- : .:: . :: : : :. . ..:. :.: .: .: :: KIAA00 -----YPK-KPLGQ-----LP-PELQSWGVHHLSNGQRSVGRPSPLASGRRESGAPHRRH 380 390 400 410 420 210 220 230 240 250 FLJ000 ---PRPSSTKGLP---QNPGQQAALWVAQRIKMWPPCFPVRSGLVLHKNTCAGTLCHTST :.:.: : : : : .... ....: KIAA00 EHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQDSSRQYNHAAANQN 430 440 450 460 470 480 260 270 FLJ000 QTWMLGSMVSLLQF KIAA00 SNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVTVPGPAEVRVSNVRP 490 500 510 520 530 540 >>KIAA2014 ( 1032 res) ff00951s1 (1032 aa) initn: 103 init1: 103 opt: 114 Z-score: 96.0 bits: 27.4 E(): 3.8 Smith-Waterman score: 115; 21.320% identity (50.761% similar) in 197 aa overlap (73-251:403-593) 50 60 70 80 90 100 FLJ000 PAPAWKGQVLPHLLSPKKSFGLTLRLWDVLILEGEQVLTAMAHASFKIHREHLMKLSWST . : :. .. ... . .. :..:... KIAA20 QVQIQAYLDNVFDVGGLLEDAETKNVALEKVEELEEHVSHLTEKLLDLENENMMRVA--- 380 390 400 410 420 110 120 130 140 150 160 FLJ000 VWEFQERLSQSWALEDNSVLRNLQTSMKELTKKHWDLPSPGELERGSSRVSPGIRPLCEG :....: : : .:. .. ... ... . . : . .. :..: : KIAA20 --ELEKQLLQR-EKELESIKETYENTSHQVHTLRRLIKEKEEAFQRRCHLEPNVRGLESV 430 440 450 460 470 480 170 180 190 200 210 FLJ000 DRLAL----PS------PPAQLQGLMPSAPQDKSLVLPQPGLTGLSPWRRPRPSSTKGLP : :: :. ::..:. : :. : .. : :: : : : : :.. : KIAA20 DSEALARVGPAELSEGMPPSDLDLLAPAPPPEEVLPLPPPPAPPLPPPPPPLPDKCPPAP 490 500 510 520 530 540 220 230 240 250 260 FLJ000 QNPGQQAALWVA---QRIKMWPPC-----FPVRSGLVLHKNTCAGTLCHTSTQTWMLGSM :: .. .. . :.. : .:: . .:. : .::. KIAA20 PLPGAAPSVVLTVGLSAIRIKKPIKTKFRLPVFNWTALKPNQISGTVFSELDDEKILEDL 550 560 570 580 590 600 270 FLJ000 VSLLQF KIAA20 DLDKFEELFKTKAQGPALDLICSKNKTAQKAASKVTLLEANRAKNLAITLRKAGRSAEEI 610 620 630 640 650 660 >>KIAA1343 ( 520 res) fj00420 (520 aa) initn: 56 init1: 56 opt: 107 Z-score: 93.6 bits: 26.0 E(): 5.2 Smith-Waterman score: 107; 26.923% identity (46.154% similar) in 130 aa overlap (108-236:363-480) 80 90 100 110 120 130 FLJ000 QVLTAMAHASFKIHREHLMKLSWSTVWEFQERLSQSWALEDNSVLRNLQTS-MKELTKKH :.. : : :... : ..: . : ::. KIAA13 DFQAIADVIGNKTVGQVKNFFVNYRRRFNLEEVLQEWEAEQGTQASNGDASTLGEETKSA 340 350 360 370 380 390 140 150 160 170 180 190 FLJ000 WDLPSPGELERGSSRVSPGIRPLCEGDRLALPSPPAQLQGLMPSAPQDKSLVLPQPGLTG ..:: .. .: .. : ::::: . :.:: .: : : : KIAA13 SNVPSGKSTDEEEEAQTP------QAPRTLGPSPPAPSSTPTPTAPI-ATLNQPPPLLRP 400 410 420 430 440 200 210 220 230 240 250 FLJ000 LSPWRRPRPSSTKGLPQNPGQQAALWVAQRIKMWPPCFPVRSGLVLHKNTCAGTLCHTST : :. . : : :: : .. : . : :. KIAA13 TLP---AAPALHRQPP--PLQQQARFIQPRPTLNQPPPPLIRPANSMPPRLNPRPVLSTV 450 460 470 480 490 500 260 270 FLJ000 QTWMLGSMVSLLQF KIAA13 GGQQPPSLIGIQTDSQSSLH 510 520 >>FLJ00153 ( 497 res) sh06127 (497 aa) initn: 103 init1: 61 opt: 105 Z-score: 92.2 bits: 25.7 E(): 6.1 Smith-Waterman score: 105; 35.165% identity (51.648% similar) in 91 aa overlap (141-229:337-418) 120 130 140 150 160 FLJ000 SQSWALEDNSVLRNLQTSMKELTKKHWDLPSPGELERGSSRVSPGIRPLCEGDRLALP-- :::. .: :::: : .: : : FLJ001 PSSPRIRRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDA-PAG 310 320 330 340 350 360 170 180 190 200 210 220 FLJ000 SPPAQLQGLMPSAPQDKSLVLPQPGLTGLSPWRRPRPSSTKGLPQNPGQQAALWVAQRIK ::::. ::. :: ::.: .: : :: .: :.::.. . :.. FLJ001 SPPASPGPQGPSTKLPLSLDLPSPRPFAL-PLGSPR------IPL-PAQQSSEACVIRVS 370 380 390 400 410 230 240 250 260 270 FLJ000 MWPPCFPVRSGLVLHKNTCAGTLCHTSTQTWMLGSMVSLLQF . FLJ001 IDNDHGNLYRSILLTSQDKAPSVVRRALQKHNVPQPWACDYQLFQVLPGDRGWEEMLISA 420 430 440 450 460 470 >>KIAA0910 ( 1315 res) hg02207s1 (1315 aa) initn: 103 init1: 46 opt: 108 Z-score: 90.5 bits: 26.8 E(): 7.6 Smith-Waterman score: 108; 29.600% identity (44.000% similar) in 125 aa overlap (141-255:1111-1227) 120 130 140 150 160 FLJ000 SQSWALEDNSVLRNLQTSMKELTKKHWDLPSPGELERGSSRV-----SPGIRPLCEGDRL .:: :: . .: ::. : KIAA09 SPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPPPRPVAPPTRP 1090 1100 1110 1120 1130 1140 170 180 190 200 210 220 FLJ000 ALPSPPAQLQGLMPSAPQDKSLVLPQ-PGLTGLSPWRRPRPSSTKGLPQNPGQQAALWVA : :. : .: :: : . :. :: : . : .:: :: .:: : . . KIAA09 APPQRPPPPSGARSPAPTRKEFGAPKSPGTTRKDNIGRSQPSPQAGLA-GPG--PAGYST 1150 1160 1170 1180 1190 230 240 250 260 270 FLJ000 QRIKMWPPCFPVRSGLVL----HKNTCAGTLCHTSTQTWMLGSMVSLLQF : : .: :.:.. : . :: : : KIAA09 AR-----PTIPPRAGVISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFP 1200 1210 1220 1230 1240 1250 KIAA09 PQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRSRSSHSLPSEASSQPQQEQ 1260 1270 1280 1290 1300 1310 >>FLJ00193 ( 491 res) sj02629 (491 aa) initn: 98 init1: 74 opt: 101 Z-score: 89.3 bits: 25.1 E(): 8.9 Smith-Waterman score: 101; 29.730% identity (45.946% similar) in 111 aa overlap (135-232:323-426) 110 120 130 140 150 FLJ000 EFQERLSQSWALEDNSVLRNLQTSMKELTKKHWDLPSPGELERGSSRV--------SPGI :: : :: :.:::::. : : FLJ001 PGPLFASLQNPERPGGAQGHDNHTTLPADWKHRREPPPGPLDRGSSRLDRSYSYSYSNGP 300 310 320 330 340 350 160 170 180 190 200 210 FLJ000 RPLCEGDRLALPSPPAQLQGLMPSAPQDKSLVLPQPGLTGLSPWRRPRPSS---TKGLPQ :. . .. :.. .: : . . :.: : :: :: :: :. FLJ001 GPFYNKGLISEEELGASVASLSSENPY--ATIRDLPSLPG-----GPRESSYMEMKGPPS 360 370 380 390 400 220 230 240 250 260 270 FLJ000 N--PGQQAALWVAQRIKMWPPCFPVRSGLVLHKNTCAGTLCHTSTQTWMLGSMVSLLQF . : : .: .:: .. : FLJ001 GSPPRQPPQFWDSQRRRQPQPQRDSGTYEQPSPLIHDRDSVGSQPPLPPGLPPGHYDSPK 410 420 430 440 450 460 >>KIAA1322 ( 702 res) fh13826 (702 aa) initn: 110 init1: 88 opt: 102 Z-score: 88.6 bits: 25.5 E(): 9.8 Smith-Waterman score: 102; 24.762% identity (56.190% similar) in 105 aa overlap (55-157:599-701) 30 40 50 60 70 80 FLJ000 RGPQHSRGLKPQWVLLRPPAPAWKGQVLPHLLSPKKSFGLTLRLWDVLILEGEQVLTAMA : : . . :. :.:::. .::. : : KIAA13 FFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTA 570 580 590 600 610 620 90 100 110 120 130 140 FLJ000 HASFKIHREHLMKLSWSTVWEFQERLSQSWALEDNSVLRNLQTSMKELTKKHWD--LPSP . .:. .. : :... . .: :: .. :. .. .. : . . .:.: : . KIAA13 LGILKLFEDILTKMDFIHMAQFLTRLPEDLPAEE--LFASIATIQMQSRNKKWAQVLTAL 630 640 650 660 670 680 150 160 170 180 190 200 FLJ000 GELERGSSRVSPGIRPLCEGDRLALPSPPAQLQGLMPSAPQDKSLVLPQPGLTGLSPWRR . : . ::..: KIAA13 QKDSREMEKGSPSLRH 690 700 >>KIAA0905 ( 1229 res) hk10341 (1229 aa) initn: 119 init1: 97 opt: 105 Z-score: 88.5 bits: 26.3 E(): 9.8 Smith-Waterman score: 105; 33.766% identity (50.649% similar) in 77 aa overlap (166-236:951-1027) 140 150 160 170 180 190 FLJ000 HWDLPSPGELERGSSRVSPGIRPLCEGDRLALPSPP---AQLQGLMPSAPQDKSLVLPQP ..: :: :..: :.:: ..: : KIAA09 YISSASSYTGQSQLYAAQHQASSPTSSPATSFPPPPSSGASFQHGGPGAPPSSSAYALPP 930 940 950 960 970 980 200 210 220 230 240 FLJ000 GLTGLSPWRRPRPSSTKGLPQNP-GQQAALWVAQRIKMWPPCF--PVRSGLVLHKNTCAG : :: : :.: . ::: .. :: . . : : : :: KIAA09 GTTGTLPAASELPASQRTGPQNGWNDPPALNRVPKKKKMPENFMPPVPITSPIMNPLGDP 990 1000 1010 1020 1030 1040 250 260 270 FLJ000 TLCHTSTQTWMLGSMVSLLQF KIAA09 QSQMLQQQPSAPVPLSSQSSFPQPHLPGGQPFHGVQQPLGQTGMPPSFSKPNIEGAPGAP 1050 1060 1070 1080 1090 1100 >>FLJ00065 ( 204 res) as00065 (204 aa) initn: 51 init1: 51 opt: 95 Z-score: 88.4 bits: 23.7 E(): 10 Smith-Waterman score: 95; 31.765% identity (55.294% similar) in 85 aa overlap (154-228:78-158) 130 140 150 160 170 180 FLJ000 NLQTSMKELTKKHWDLPSPGELERGSSRVSPGIRPLCEGDRLALP-SPPAQLQGLM-PSA ::.:: . :. . :: . ::.: : . FLJ000 SLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCG 50 60 70 80 90 100 190 200 210 220 230 FLJ000 PQDKSLVLPQPGLTGLSPWRRPRPSSTKG-LP---QNP-GQ---QAALWVAQRIKMWPPC .. :: . : . .: : :.: . :: : : :: :: . .:.... FLJ000 VTEE----PQRLFYGNAGYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQ 110 120 130 140 150 160 240 250 260 270 FLJ000 FPVRSGLVLHKNTCAGTLCHTSTQTWMLGSMVSLLQF FLJ000 FHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNGAGPR 170 180 190 200 >>KIAA1249 ( 949 res) hh04184 (949 aa) initn: 76 init1: 47 opt: 102 Z-score: 87.4 bits: 25.7 E(): 11 Smith-Waterman score: 131; 27.103% identity (50.467% similar) in 214 aa overlap (4-215:630-813) 10 20 30 FLJ000 DESPMRSCRTLSDRSLMEGSHPMERGPQHSRGL :. : .: : : . ..: : :.: : KIAA12 TDSPTSPTTEAPPLPPRNAGKGPTGPPSTLPL-STQTSSGSSTLSKKRPPPPPPGHKRTL 600 610 620 630 640 650 40 50 60 70 80 90 FLJ000 KPQWVLLRPPAPAWKGQVLP--HLLSPKKSFGLTLRLWDVLILEGEQVLTAMAHASFKIH . : : .: :: : : . .:..: : .. :: . .. . :. . KIAA12 SDPPSPL-PHGPPNKGAV-PWGNDGGPSSSSKTTNKF------EGLSQQSSTSSAKTALG 660 670 680 690 700 710 100 110 120 130 140 150 FLJ000 REHLMKLSWSTVWEFQERLSQSWALEDNSVLRNLQTSMKELTKKHWDLPSPGELERGSSR . : :: ... . ..:: . : .... .... :: .: : ::.: .. KIAA12 PRVLPKLPQKVALRKTDHLSLDKATIPPEIFQK-SSQLAELPQK----PPPGDLPPKPTE 720 730 740 750 760 160 170 180 190 200 210 FLJ000 VSPGIRPLCEGDRLALPSPPAQLQGLMPSAPQDKSLVLPQPGLTGLSPWRRPRPSSTKGL ..: .: :: :: : : .: :: .: :.: :. : : .:. : : KIAA12 LAP--KPQI-GD---LPPKP----GELPPKPQLGDLP-PKPQLSDLPP--KPQ---MKDL 770 780 790 800 220 230 240 250 260 270 FLJ000 PQNPGQQAALWVAQRIKMWPPCFPVRSGLVLHKNTCAGTLCHTSTQTWMLGSMVSLLQF : .: KIAA12 PPKPQLGDLLAKSQTGDVSPKAQQPSEVTLKSHPLDLSPNVQSRDAIQKQASEDSNDLTP 810 820 830 840 850 860 270 residues in 1 query sequences 2210724 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:30:44 2009 done: Fri Feb 27 10:30:44 2009 Total Scan time: 0.420 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]