# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00058.fasta.huge -Q ../query/FLJ00058.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00058, 164 aa vs ./tmplib.10216 library 2210830 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.8263+/-0.00519; mu= 9.8454+/- 0.348 mean_var=157.8146+/-35.051, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.102094 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0363 ( 1522 res) hh00103 (1522) 164 35.2 0.016 KIAA0973 ( 1583 res) hj06871 (1583) 123 29.2 1.1 KIAA1277 ( 1039 res) fj11251 (1039) 119 28.3 1.2 KIAA0755 ( 1093 res) hk04532 (1093) 112 27.3 2.6 KIAA1652 ( 179 res) hg02500 ( 179) 98 24.2 3.7 KIAA0793 ( 1055 res) hk05692 (1055) 106 26.4 4.7 KIAA1139 ( 1124 res) hk00330 (1124) 103 26.0 6.7 KIAA0790 ( 1319 res) hk05609 (1319) 102 26.0 8.1 KIAA0817 ( 2785 res) hg01392s2 (2785) 106 27.0 8.4 KIAA1042 ( 1019 res) fh02877 (1019) 100 25.5 8.5 FLJ00204 ( 573 res) sj04432 ( 573) 94 24.3 11 FLJ00037 ( 145 res) as00037 ( 145) 85 22.2 12 FLJ00227 ( 196 res) sj06355 ( 196) 86 22.5 13 KIAA1695 ( 1199 res) fj11471 (1199) 96 25.0 14 KIAA0235 ( 1064 res) ha04677s1 (1064) 95 24.8 15 KIAA1938 ( 1376 res) hg00912s1 (1376) 96 25.1 15 KIAA1602 ( 1003 res) fj10252 (1003) 94 24.6 16 KIAA1441 ( 1258 res) hg02860b (1258) 94 24.8 18 KIAA1007 ( 1835 res) bg00162 (1835) 96 25.3 18 FLJ00102 ( 353 res) as00102 ( 353) 86 22.8 19 KIAA1883 ( 1480 res) fh02249 (1480) 94 24.9 20 KIAA0929 ( 1663 res) hh03374 (1663) 94 24.9 21 KIAA1311 ( 889 res) fh11512 ( 889) 90 24.0 22 KIAA2025 ( 1109 res) fh08764 (1109) 91 24.2 23 KIAA0290 ( 906 res) ha06644 ( 906) 89 23.8 24 KIAA1778 ( 341 res) pg00707 ( 341) 83 22.4 25 KIAA1002 ( 962 res) hk09859 ( 962) 88 23.7 28 KIAA0992 ( 772 res) hk07554 ( 772) 86 23.3 30 KIAA1295 ( 550 res) fg01760 ( 550) 84 22.8 30 KIAA1966 ( 480 res) fh23421 ( 480) 83 22.6 31 KIAA1681 ( 1236 res) fh23697 (1236) 88 23.9 32 FLJ00353 ( 1766 res) sh01144 (1766) 90 24.4 33 KIAA1897 ( 645 res) fk06538 ( 645) 84 22.9 33 KIAA0910 ( 1315 res) hg02207s1 (1315) 88 23.9 34 KIAA1856 ( 1134 res) fh03203 (1134) 87 23.7 34 KIAA0007 ( 686 res) ha02056 ( 686) 84 22.9 34 KIAA0208 ( 748 res) ha02713 ( 748) 84 23.0 36 KIAA2001 ( 689 res) bj00176 ( 689) 83 22.8 38 KIAA1471 ( 1421 res) fj02383s1 (1421) 87 23.8 39 KIAA1115 ( 895 res) hk05464 ( 895) 84 23.1 40 KIAA1986 ( 334 res) pg00636 ( 334) 78 21.6 41 KIAA0189 ( 1132 res) ha02928 (1132) 84 23.2 46 KIAA1963 ( 488 res) ph00179 ( 488) 79 22.0 47 KIAA0900 ( 503 res) hk09606s1 ( 503) 79 22.0 47 KIAA0618 ( 1052 res) hg03971 (1052) 83 23.0 49 FLJ00210 ( 161 res) sj05028 ( 161) 72 20.3 49 KIAA2011 ( 1091 res) pj02017 (1091) 83 23.1 50 KIAA1172 ( 929 res) hj03919(revised) ( 929) 82 22.8 50 KIAA0492 ( 167 res) hh01162 ( 167) 72 20.3 50 KIAA0787 ( 557 res) hk05521s1 ( 557) 79 22.1 50 >>KIAA0363 ( 1522 res) hh00103 (1522 aa) initn: 112 init1: 61 opt: 164 Z-score: 138.7 bits: 35.2 E(): 0.016 Smith-Waterman score: 164; 30.667% identity (48.667% similar) in 150 aa overlap (21-162:3-137) 10 20 30 40 50 FLJ000 PHCGKYLCRRGTRVHTPTATCAFLPGIPGVNACFMGVSRSARAPPDGEL--AGGGGSSSS ::. :: . :. . .:: :.: :: ::. :. KIAA03 EPCALTPGPSHLALTFLPSKPGARPQPEGASWDAGPGGAPSA 10 20 30 40 60 70 80 90 100 110 FLJ000 ----SLGGTSLSQLRQG--KRELRTLTPTHAHTQGSVGWEREGRFSFCSLGLPRAFPAAE . :: : : .: .. : : .: : . . :. . .: ::: .: KIAA03 WADPGEGGPSPMLLPEGLSSQALSTEAPLPATLEPRIVM---GEETCQALLSPRAARTAL 50 60 70 80 90 120 130 140 150 160 FLJ000 RDTSSQVKGHSGPGPDPVVTHLGTFPDQLRLPCPPLSRKEPEPSPLSHPPQG :: : ::..: : : . : .: .: :: :.:. . :: KIAA03 RD---QEGGHASPDPPPELCSQG----DLSVPSPP-----PDPDSFFTPPSTPTKTTYAL 100 110 120 130 140 KIAA03 LPACGPHGDARDSEAELRDELLDSPPASPSGSYITADGDSWASSPSCSLSLLAPAEGLDF 150 160 170 180 190 200 >>KIAA0973 ( 1583 res) hj06871 (1583 aa) initn: 88 init1: 61 opt: 123 Z-score: 105.9 bits: 29.2 E(): 1.1 Smith-Waterman score: 123; 27.972% identity (55.245% similar) in 143 aa overlap (24-163:1137-1270) 10 20 30 40 50 FLJ000 PHCGKYLCRRGTRVHTPTATCAFLPGIPGVNACFMGVSRSARAPPDGELAGGG ::: : . . ..: :. ::. :.. KIAA09 LFRKITKQSNLLHTSRSLSSLNRSLSSSDSLPGSPTHGLPARSPTHSYRSTPDSAYLGAS 1110 1120 1130 1140 1150 1160 60 70 80 90 100 110 FLJ000 GSSSSSLGGTSLSQLRQGKRELRTLTPTHAHTQGSVGWEREGRFSFC-SLG-LPRAFPAA ..::: ..: : ......: :. : : .:. : . : : : .: . : : KIAA09 SQSSSPASSTPNSPASSASHHIR---PSTLHGL-SPKLHRQYRSARCKSAGNIPLS-PLA 1170 1180 1190 1200 1210 1220 120 130 140 150 160 FLJ000 ERDTSSQVKGHSGPGPDPVVTHLG-TFPDQLRLPCPPLSRKEPEPSPLSHPPQG . . .:.. :: .: .:: .:. ::. : :.:. ..::. KIAA09 HTPSPTQASPPPLPGHTVGSSHTTQSFPAKLH-SSPPVVR--PRPKS-AEPPRSPLLKRV 1230 1240 1250 1260 1270 KIAA09 QSAEKLGASLSADKKGALRKHSLEVGHPDFRKDFHGELALHSLAESDGETPPVEGLGAPR 1280 1290 1300 1310 1320 1330 >>KIAA1277 ( 1039 res) fj11251 (1039 aa) initn: 104 init1: 65 opt: 119 Z-score: 104.7 bits: 28.3 E(): 1.2 Smith-Waterman score: 119; 27.517% identity (44.295% similar) in 149 aa overlap (22-162:199-343) 10 20 30 40 50 FLJ000 PHCGKYLCRRGTRVHTPTATCAFLPGIPGVNACFMGVSRSARAPPDGELAG :. : :.. . :. : . ::: : KIAA12 WGRGREPRLGKLRFQNDHLSVLKQVKKLEQALKDGSAGLDPQLPGTCYSPHCPPDK--AE 170 180 190 200 210 220 60 70 80 90 100 FLJ000 GGGSSSSSLGGTSLSQLRQ----GKRELRTLTPTHAHT-QGSV--GWEREGRFSF-CSLG .:.. .::: : :.. : . : : :: .. .:: :.: . . : : KIAA12 AGSTLPENLGGGSGSEVSQRVHPSDLEGREPTPELVEDRKGSCRRPWDRSLENVYRGSEG 230 240 250 260 270 280 110 120 130 140 150 160 FLJ000 LPRAFPAAERDTSSQVKGHSGPGPDPVVTHLGTFPDQLRLPCPPLSRKEPEPSPLSHPPQ : .. :.: : .: .. :: :: : : : : :: KIAA12 SPTKPFINPLPKPRRTFKHAGEGDKDGKPGIGFRKEKRNLP--PLPSLPPPPLPSSPPPS 290 300 310 320 330 340 FLJ000 G KIAA12 SVNRRLWTGRQKSSADHRKSYEFEDLLQSSSESSRVDWYAQTKLGLTRTLSEENVYEDIL 350 360 370 380 390 400 >>KIAA0755 ( 1093 res) hk04532 (1093 aa) initn: 94 init1: 66 opt: 112 Z-score: 98.9 bits: 27.3 E(): 2.6 Smith-Waterman score: 112; 28.758% identity (46.405% similar) in 153 aa overlap (24-163:145-284) 10 20 30 40 50 FLJ000 PHCGKYLCRRGTRVHTPTATCAFLPGIPGVNACFMGVSRSARAPPDGELAGGG .:: : :: .: : :... . : KIAA07 RGMLPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNV---ASSHAPYQPSAQSSYPG 120 130 140 150 160 170 60 70 80 90 100 110 FLJ000 GSSSSSLG--GTSLSQLRQGKRELRTLTPTHAHTQGSVGWEREGRFSFCSLGLPRAFPAA :.::. :..:: . : . ..: .:: : .: :: : : KIAA07 PISTSSVTQLGSQLSAM-QINSYGSGMAPP---SQGP-----PGPLSATSLQTPPRPPQP 180 190 200 210 220 120 130 140 150 160 FLJ000 E-RDTSSQV-----KGHSGPGPDPVVTHLGTFPDQLRLPCPPLSRKEPEPSP-----LSH . .::: .::: .:. . :: : : :: .. .: : : .. KIAA07 SILQPGSQVLPPPPTTLNGPGASPLPLPMYR-PDGLSGPPPPNAQYQPPPLPGQTLGAGY 230 240 250 260 270 280 FLJ000 PPQG ::: KIAA07 PPQQANSGPQMAGAQLSYPGGFPGGPAQMAGPPQPQKKLDPDSIPSPIQVIENDRASRGG 290 300 310 320 330 340 >>KIAA1652 ( 179 res) hg02500 (179 aa) initn: 110 init1: 55 opt: 98 Z-score: 96.1 bits: 24.2 E(): 3.7 Smith-Waterman score: 98; 30.556% identity (58.333% similar) in 72 aa overlap (4-71:96-167) 10 20 30 FLJ000 PHCGKYLCRRGTRVHTPTATCAFLPGIPGV-NA :. :. .: .:. : . : . .. KIAA16 LLPLNRGAALDQAHRDVADQWAGGCVPGKPGRQPGRQQARPLPTQQSCGGLHAHPPLLGV 70 80 90 100 110 120 40 50 60 70 80 FLJ000 CFMGVSRSARAPPD---GELAGGGGSSSSSLGGTSLSQLRQGKRELRTLTPTHAHTQGSV ::. . . . ::: : . .:::: :.::.. :. :.: KIAA16 CFIFLYFQNEHPPDSLPGMIDAGGGSFSQSLASDPASRGRRGFCAPAGGRSGMC 130 140 150 160 170 90 100 110 120 130 140 FLJ000 GWEREGRFSFCSLGLPRAFPAAERDTSSQVKGHSGPGPDPVVTHLGTFPDQLRLPCPPLS >>KIAA0793 ( 1055 res) hk05692 (1055 aa) initn: 77 init1: 53 opt: 106 Z-score: 94.3 bits: 26.4 E(): 4.7 Smith-Waterman score: 106; 50.000% identity (57.692% similar) in 52 aa overlap (109-159:441-484) 80 90 100 110 120 130 FLJ000 TPTHAHTQGSVGWEREGRFSFCSLGLPRAFPAAERDTSSQVKGHSGPGPD-PVVTHLGTF ::::: :. : : ::: : . :: KIAA07 SPSTLVPSGLPEFKDSSSSLTDPQVSYVKSPAAER-RSGAVAG----GPDTPSAQPLG-- 420 430 440 450 460 140 150 160 FLJ000 PDQLRLPCPPLSRKEPEPSPLSHPPQG : :. : : :: : :.::: : KIAA07 PPALQ-PGPGLSTKSPQPSPSSRKSPLSLSPAFQVPLGPAEQGSSPLLSPVLSDAGGAGM 470 480 490 500 510 520 >>KIAA1139 ( 1124 res) hk00330 (1124 aa) initn: 59 init1: 59 opt: 103 Z-score: 91.6 bits: 26.0 E(): 6.7 Smith-Waterman score: 103; 26.984% identity (45.238% similar) in 126 aa overlap (38-162:722-839) 10 20 30 40 50 60 FLJ000 CRRGTRVHTPTATCAFLPGIPGVNACFMGVSRSARAPPDGELAGGG-GSSSSSLGGTSLS : : .: .:. : . : .:.::. . KIAA11 PPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGPTEGDAEGEAEGPVGSTLGSYATL 700 710 720 730 740 750 70 80 90 100 110 120 FLJ000 QLRQGKRELRTLTPTHAHTQGSVGWEREGRFSFCSLGLPRAFPAAERDTSSQVKGHSGPG : :. : .:. . : . : : :.. . : .: .: :::. KIAA11 TRRPGRSALVRTSPSVTPTPAR-GTPRSQSFALRARRKGPPPPPPKRLSSV-----SGPS 760 770 780 790 800 130 140 150 160 FLJ000 PDPVVTHLGTFPDQLRLPCPPLSRKEPEPSPLSHPPQG :.: : : . : : ::. :.:: KIAA11 PEP--PPLDGSPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPP 810 820 830 840 850 860 KIAA11 SRGSSGEGLPFAEEGNLTIKQRPKPAGPPPRETPVPPGLDFNLTESDTVKRRPKCREREP 870 880 890 900 910 920 >>KIAA0790 ( 1319 res) hk05609 (1319 aa) initn: 109 init1: 71 opt: 102 Z-score: 90.0 bits: 26.0 E(): 8.1 Smith-Waterman score: 102; 36.066% identity (52.459% similar) in 61 aa overlap (100-157:54-105) 70 80 90 100 110 120 FLJ000 QGKRELRTLTPTHAHTQGSVGWEREGRFSFCSLGLPRAF--PAAERDTSSQVKGHSGPGP :. ::.. : :::. . : .:::: KIAA07 VAGAAGACSAGARLGDAAGGDPASGQAARGCGARAPRGLGRTARARDTAMEDAGAAGPGP 30 40 50 60 70 80 130 140 150 160 FLJ000 DPVVTHLGTFPDQLRLPCP-PLSRKEPEPSPLSHPPQG .: :. : : : . ::::.: KIAA07 EPE-------PEP--EPEPEPAPEPEPEPKPGAGTSEAFSRLWTDVMGILDGSLGNIDDL 90 100 110 120 130 KIAA07 AQQYADYYNTCFSDVCERMEELRKRRVSQDLEVEKPDASPTSLQLRSQIEESLGFCSAVS 140 150 160 170 180 190 >>KIAA0817 ( 2785 res) hg01392s2 (2785 aa) initn: 101 init1: 70 opt: 106 Z-score: 89.8 bits: 27.0 E(): 8.4 Smith-Waterman score: 115; 26.027% identity (47.260% similar) in 146 aa overlap (1-137:1382-1513) 10 20 30 FLJ000 PHCGKYLCRRGTRVHTPTATCAFLPGIPGV ::: :: .. .:: ..:: :: KIAA08 PGSCPVPQECVPQDGAAGAGLCRCPQGWAGPHCRMALCPENCNAHTGAGTCN---QSLGV 1360 1370 1380 1390 1400 40 50 60 70 80 90 FLJ000 NACFMGVSRSARAPPDGELAGGGGSSSSSLGGTSLSQLRQGKRELRTLTPTHAHTQGSVG : : . .: . :: .: . :: ..: :. : : . .. KIAA08 CICAEGFG----GPDCATKLDGGQLVWETLMDSRLSA-DTASRFLHRLGHTMVDGPDATL 1410 1420 1430 1440 1450 1460 100 110 120 130 140 FLJ000 WEREGRFSFCSLGLPRA-------FPAAERDTSSQVKG--HSGPGPDPVVTHLGTFPDQL : : .::::.. . ..:: .... : .::::.: : ... KIAA08 WM------FGGLGLPQGLLGNLYRYSVSERRWTQMLAGAEDGGPGPSPRSFHAAAYVPAG 1470 1480 1490 1500 1510 150 160 FLJ000 RLPCPPLSRKEPEPSPLSHPPQG KIAA08 RGAMYLLGGLTAGGVTRDFWVLNLTTLQWRQEKAPQTVELPAVAGHTLTARRGLSLLLVG 1520 1530 1540 1550 1560 1570 >>KIAA1042 ( 1019 res) fh02877 (1019 aa) initn: 104 init1: 77 opt: 100 Z-score: 89.6 bits: 25.5 E(): 8.5 Smith-Waterman score: 100; 23.973% identity (54.110% similar) in 146 aa overlap (10-149:830-968) 10 20 30 FLJ000 PHCGKYLCRRGTRVHTPTATCAFLPGIPGVNACFMGVSR ::. .:. : : .:. : . : . KIAA10 MSTSLGLVWLLKERGISAAVYDPQSWDRAGRGSLLHSYTPKMAVIPSTPPNSP--MQTPT 800 810 820 830 840 850 40 50 60 70 80 90 FLJ000 SARAPPDGELAGGGGSSSSSLGGTSLSQLRQGKRELRTLTPTHAHTQGSVG----WEREG :. ::. :. . .. :.. :.. . :: ... ....:. ::. .. KIAA10 SS--PPSFEFKCTSPPYDNFLASKPASSILREVRE-KNVRSSESQTDVSVSNLNLVDKVR 860 870 880 890 900 910 100 110 120 130 140 150 FLJ000 RFSFCSL-GLPRAF-PAAERDTSSQVKGHSGPGPDPVVTHLGTFPDQLRLPCPPLSRKEP ::. .. . :: :. .. . . : ::: :... : :. : : :: .. KIAA10 RFGVAKVVNSGRAHVPTLTEEQGPLLCGP--PGPAPALVPRGLVPEGLPLRCPTVTSAIG 920 930 940 950 960 970 160 FLJ000 EPSPLSHPPQG KIAA10 GLQLNSGIRRNRSFPTMVGSSMQMKAPVTLTSGILMGAKLSKQTSLR 980 990 1000 1010 164 residues in 1 query sequences 2210830 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:14 2009 done: Fri Feb 27 10:32:15 2009 Total Scan time: 0.340 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]