# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00058.fasta.nr -Q ../query/FLJ00058.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 FLJ00058, 164 aa
 vs /cdna2/lib/nr/nr library

2693465022 residues in 7827732 sequences
 statistics sampled from 60000 to 7826311 sequences
  Expectation_n fit: rho(ln(x))= 5.3638+/-0.00019; mu= 7.2923+/- 0.011
 mean_var=83.5365+/-15.930, 0's: 36 Z-trim: 37  B-trim: 0 in 0/66
 Lambda= 0.140325

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 36, opt: 24, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(7827732)
gi|10440444|dbj|BAB15755.1| FLJ00058 protein [Homo ( 164) 1172 245.8 2.1e-63
gi|119589778|gb|EAW69372.1| guanine nucleotide bin ( 130)  910 192.7 1.7e-47


>>gi|10440444|dbj|BAB15755.1| FLJ00058 protein [Homo sap  (164 aa)
 initn: 1172 init1: 1172 opt: 1172  Z-score: 1294.4  bits: 245.8 E(): 2.1e-63
Smith-Waterman score: 1172;  100.000% identity (100.000% similar) in 164 aa overlap (1-164:1-164)

               10        20        30        40        50        60
FLJ000 PHCGKYLCRRGTRVHTPTATCAFLPGIPGVNACFMGVSRSARAPPDGELAGGGGSSSSSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|104 PHCGKYLCRRGTRVHTPTATCAFLPGIPGVNACFMGVSRSARAPPDGELAGGGGSSSSSL
               10        20        30        40        50        60

               70        80        90       100       110       120
FLJ000 GGTSLSQLRQGKRELRTLTPTHAHTQGSVGWEREGRFSFCSLGLPRAFPAAERDTSSQVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|104 GGTSLSQLRQGKRELRTLTPTHAHTQGSVGWEREGRFSFCSLGLPRAFPAAERDTSSQVK
               70        80        90       100       110       120

              130       140       150       160    
FLJ000 GHSGPGPDPVVTHLGTFPDQLRLPCPPLSRKEPEPSPLSHPPQG
       ::::::::::::::::::::::::::::::::::::::::::::
gi|104 GHSGPGPDPVVTHLGTFPDQLRLPCPPLSRKEPEPSPLSHPPQG
              130       140       150       160    

>>gi|119589778|gb|EAW69372.1| guanine nucleotide binding  (130 aa)
 initn: 910 init1: 910 opt: 910  Z-score: 1009.1  bits: 192.7 E(): 1.7e-47
Smith-Waterman score: 910;  100.000% identity (100.000% similar) in 130 aa overlap (35-164:1-130)

           10        20        30        40        50        60    
FLJ000 KYLCRRGTRVHTPTATCAFLPGIPGVNACFMGVSRSARAPPDGELAGGGGSSSSSLGGTS
                                     ::::::::::::::::::::::::::::::
gi|119                               MGVSRSARAPPDGELAGGGGSSSSSLGGTS
                                             10        20        30

           70        80        90       100       110       120    
FLJ000 LSQLRQGKRELRTLTPTHAHTQGSVGWEREGRFSFCSLGLPRAFPAAERDTSSQVKGHSG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LSQLRQGKRELRTLTPTHAHTQGSVGWEREGRFSFCSLGLPRAFPAAERDTSSQVKGHSG
               40        50        60        70        80        90

          130       140       150       160    
FLJ000 PGPDPVVTHLGTFPDQLRLPCPPLSRKEPEPSPLSHPPQG
       ::::::::::::::::::::::::::::::::::::::::
gi|119 PGPDPVVTHLGTFPDQLRLPCPPLSRKEPEPSPLSHPPQG
              100       110       120       130




164 residues in 1 query   sequences
2693465022 residues in 7827732 library sequences
 Tcomplib [34.26] (2 proc)
 start: Fri Feb 27 17:56:55 2009 done: Fri Feb 27 18:01:13 2009
 Total Scan time: 621.720 Total Display time:  0.000

Function used was FASTA [version 34.26.5 April 26, 2007]