# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00063.fasta.huge -Q ../query/FLJ00063.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00063, 133 aa vs ./tmplib.10216 library 2210861 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.5406+/-0.00371; mu= 18.4212+/- 0.252 mean_var=77.3124+/-17.096, 0's: 0 Z-trim: 0 B-trim: 28 in 1/39 Lambda= 0.145864 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00083 ( 216 res) as00083 ( 216) 84 25.4 1.6 KIAA0195 ( 1410 res) ha02752 (1410) 89 27.8 2 KIAA1115 ( 895 res) hk05464 ( 895) 85 26.6 2.8 FLJ00176 ( 403 res) sj00934 ( 403) 81 25.2 3.3 KIAA0102 ( 225 res) ha00791 ( 225) 78 24.2 3.8 KIAA0508 ( 253 res) hh00207 ( 253) 75 23.7 6.3 KIAA1208 ( 950 res) fj07955 ( 950) 79 25.4 6.9 KIAA1748 ( 758 res) pj02084 ( 758) 78 25.1 7.1 FLJ00259 ( 659 res) sh04102 ( 659) 77 24.7 7.7 KIAA0657 ( 1237 res) hk01859s1 (1237) 79 25.6 7.9 KIAA1404 ( 1925 res) eg01672 (1925) 79 25.9 10 KIAA0282 ( 711 res) ha06845s1 ( 711) 75 24.4 11 KIAA1781 ( 974 res) fg06971(revised) ( 974) 76 24.8 11 FLJ00193 ( 491 res) sj02629 ( 491) 72 23.5 14 KIAA1928 ( 757 res) fg05950(revised) ( 757) 73 24.0 15 FLJ00305 ( 789 res) sh05120 ( 789) 73 24.0 15 FLJ00108 ( 216 res) as00108 ( 216) 68 22.1 16 KIAA0149 ( 830 res) ha01221 ( 830) 72 23.9 18 KIAA1780 ( 1192 res) pf01012 (1192) 73 24.3 19 FLJ00206 ( 702 res) sj04644 ( 702) 70 23.3 22 FLJ00349 ( 146 res) sg00018 ( 146) 64 21.0 23 FLJ00359 ( 1056 res) sh03991 (1056) 71 23.8 23 FLJ00355 ( 469 res) sh02302 ( 469) 68 22.6 24 KIAA1531 ( 1206 res) ph00937 (1206) 71 23.9 25 KIAA0520 ( 1364 res) hg02989s1 (1364) 71 24.0 27 KIAA1103 ( 453 res) hk10190 ( 453) 67 22.4 27 FLJ00136 ( 811 res) sh02543 ( 811) 69 23.2 27 KIAA1289 ( 2793 res) hh15326s2 (2793) 73 24.9 29 FLJ00294 ( 681 res) sh03769 ( 681) 68 22.9 29 KIAA1730 ( 787 res) pg01135 ( 787) 68 23.0 31 FLJ00059 ( 477 res) as00059 ( 477) 66 22.2 32 KIAA0925 ( 479 res) hh02949 ( 479) 66 22.2 32 FLJ00379 ( 487 res) sj00523 ( 487) 66 22.2 32 KIAA0574 ( 405 res) hj00204 ( 405) 65 21.9 34 FLJ00009 ( 540 res) as00009 ( 540) 66 22.3 34 KIAA1935 ( 441 res) fk03135(revised) ( 441) 65 21.9 36 KIAA0183 ( 1111 res) ha02726 (1111) 68 23.2 37 KIAA1519 ( 648 res) fh13905s1 ( 648) 66 22.4 38 FLJ00100 ( 672 res) as00100 ( 672) 66 22.4 38 KIAA1073 ( 675 res) hj06550 ( 675) 66 22.4 38 KIAA0561 ( 1308 res) hh01676 (1308) 68 23.3 40 KIAA1643 ( 993 res) hh10131(revised) ( 993) 67 22.9 40 FLJ00010 ( 772 res) as00010 ( 772) 66 22.5 41 FLJ00089 ( 349 res) as00089 ( 349) 63 21.4 42 KIAA0816 ( 1950 res) af09475 (1950) 69 23.8 43 FLJ00118 ( 123 res) as00118 ( 123) 59 19.8 44 FLJ00358 ( 217 res) sh03894 ( 217) 61 20.6 44 FLJ00008 ( 217 res) as00008 ( 217) 61 20.6 44 FLJ00099 ( 217 res) as00099 ( 217) 61 20.6 44 FLJ00236 ( 702 res) sj07289 ( 702) 65 22.3 45 >>FLJ00083 ( 216 res) as00083 (216 aa) initn: 44 init1: 44 opt: 84 Z-score: 102.9 bits: 25.4 E(): 1.6 Smith-Waterman score: 84; 25.243% identity (50.485% similar) in 103 aa overlap (28-121:35-136) 10 20 30 40 50 FLJ000 QMHLAGIWVIKKNNLIFLFFLYPPAIHPLEYSWSPPK------RGQRSQKTMVDMSA ::. : : ..:.. :.. :. FLJ000 QSHCPPGLFSKLQLSHACTLSPVGPSLGPDPLRAVWLGGKTCSGCFQNQEDFLTLLRMTR 10 20 30 40 50 60 60 70 80 90 100 110 FLJ000 VRATQAASQPLLLDVCFLLCLSCCEVKAPNTERCARDKGLQVALPTRGRPGEAGRCSGCD :: .. . :. ... .: : . . .:: ..: .: :. . : : FLJ000 VRDDNTHQLPVKVSLGTTNTCGCHTVLSDAKSLDFEPEGL-LTLMGKGVPAPLAFAPGAD 70 80 90 100 110 120 120 130 FLJ000 GGC---VCKLGVGQPWVSVTVACVI ::: . .:::: FLJ000 GGCDVVAAELGVGTEGCLQTCRLTPLSVLQHSEALGLQQGEGEPPQAWAPMVHHPWVMAS 130 140 150 160 170 180 >>KIAA0195 ( 1410 res) ha02752 (1410 aa) initn: 68 init1: 68 opt: 89 Z-score: 101.1 bits: 27.8 E(): 2 Smith-Waterman score: 89; 38.462% identity (58.974% similar) in 39 aa overlap (98-132:11-49) 70 80 90 100 110 120 FLJ000 FLLCLSCCEVKAPNTERCARDKGLQVALPTRGRPGEAGRCSGCD---GGCVCKLGVGQPW ::::. . :: :: : :.: :. KIAA01 GGGWEGRGRGRGRPAPGPRCCDCDRLTGVCTCWGGAFLSG 10 20 30 40 130 FLJ000 VSVTV-ACVI :.. . ::. KIAA01 VTTFIWACLQYSWPMDLKEKHLGEPPSALGLSTRKALSVLKEQLEAVLEGHLRERKKCLT 50 60 70 80 90 100 >>KIAA1115 ( 895 res) hk05464 (895 aa) initn: 77 init1: 55 opt: 85 Z-score: 98.4 bits: 26.6 E(): 2.8 Smith-Waterman score: 85; 35.849% identity (67.925% similar) in 53 aa overlap (19-66:344-396) 10 20 30 40 FLJ000 QMHLAGIWVIKKNNLIFLFFLYPPAIHPLEYSW---SPPKRGQRSQKT ..: :: ..::...: .:: . : . . KIAA11 ELLAQGALESTVSSVGALHALRPRLSCFHQLLLEPPKLEPLQMTWGMLAPPLGNTRLHVV 320 330 340 350 360 370 50 60 70 80 90 100 FLJ000 MVDMSAVRATQAA-SQPLL-LDVCFLLCLSCCEVKAPNTERCARDKGLQVALPTRGRPGE . ::. :..:: .. :: ::: KIAA11 KLLASALSANDAALTHELLALDVPNTMLDLFFHYVFNNFLHAQVEGCVSTMLSLGPPPDS 380 390 400 410 420 430 >>FLJ00176 ( 403 res) sj00934 (403 aa) initn: 62 init1: 62 opt: 81 Z-score: 97.0 bits: 25.2 E(): 3.3 Smith-Waterman score: 81; 41.667% identity (55.556% similar) in 36 aa overlap (92-123:60-95) 70 80 90 100 110 FLJ000 LLLDVCFLLCLSCCEVKAPNTERCARDKGLQVALPTRGRPGEAG--RCS--GCDGGCVCK : : : : :: :: ::. :: : . . FLJ001 GQTLQLSPEAPPLLPGPAQRLAVESQAPAGQDAAPEDGGPGPAGAPRCGDPGCAGQAAAR 30 40 50 60 70 80 120 130 FLJ000 LGVGQPWVSVTVACVI .. :: FLJ001 TAADQPCHREQPSGPQSLPLPGHHVPTAPGVRWGSGGLPEGAGHGDRGPGGHGAAGTAPA 90 100 110 120 130 140 >>KIAA0102 ( 225 res) ha00791 (225 aa) initn: 103 init1: 78 opt: 78 Z-score: 95.9 bits: 24.2 E(): 3.8 Smith-Waterman score: 78; 45.833% identity (58.333% similar) in 24 aa overlap (99-122:8-31) 70 80 90 100 110 120 FLJ000 LLCLSCCEVKAPNTERCARDKGLQVALPTRGRPGEAGRCSGCDGGCVCKLGVGQPWVSVT :: : .: ::: :. : : :. KIAA01 AAAAVQGGRSGGSGGCSGAGGASNCGTGSGRSGLLDK 10 20 30 130 FLJ000 VACVI KIAA01 WKIDDKPVKIDKWDGSAVKNSLDDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVA 40 50 60 70 80 90 >>KIAA0508 ( 253 res) hh00207 (253 aa) initn: 53 init1: 53 opt: 75 Z-score: 92.1 bits: 23.7 E(): 6.3 Smith-Waterman score: 75; 33.333% identity (55.556% similar) in 63 aa overlap (33-87:133-194) 10 20 30 40 50 FLJ000 HLAGIWVIKKNNLIFLFFLYPPAIHPLEYSWS--PPKRGQ----RSQKTMVDMSAVRATQ :: : ..:: :... ... .:.: KIAA05 LGWGHSMVLRSPVSPGPTCSQPWVPKCCSHWSLCPTHHGQGCLNRAESRVMQGWGVEALP 110 120 130 140 150 160 60 70 80 90 100 110 FLJ000 AASQPLLLDVCFLLCLSCCEVKAP--NTERCARDKGLQVALPTRGRPGEAGRCSGCDGGC .:. : : : :::::.. : : : : KIAA05 RGSSQLWLGWA-LPSLSCCETQEPWGRTAVCIRAVVKLQIPKCDLETTLAGEIYPGPLGL 170 180 190 200 210 220 120 130 FLJ000 VCKLGVGQPWVSVTVACVI KIAA05 SLPSPSTVRDRLRGVPPHLCVASAQQACPAHC 230 240 250 >>KIAA1208 ( 950 res) fj07955 (950 aa) initn: 89 init1: 65 opt: 79 Z-score: 91.3 bits: 25.4 E(): 6.9 Smith-Waterman score: 79; 36.000% identity (50.000% similar) in 50 aa overlap (75-124:146-187) 50 60 70 80 90 100 FLJ000 TMVDMSAVRATQAASQPLLLDVCFLLCLSCCEVKAPNTERCARDKGLQVALPTRGRPGEA :. :: :. : : : : : . KIAA12 SHSKGQKVYLTWPVPNCAEGCPGSWIKDGYCD-KACNNSACDWDGG-----DCSGNSGGS 120 130 140 150 160 110 120 130 FLJ000 GRCSGCDGGCVCKLGVGQPWVSVTVACVI .: :: . ..:::::: KIAA12 RYIAG--GGGTGSIGVGQPWQFGGGINSVSYCNQGCANSWLADKFCDQACNVLSCGFDAG 170 180 190 200 210 220 >>KIAA1748 ( 758 res) pj02084 (758 aa) initn: 96 init1: 49 opt: 78 Z-score: 91.1 bits: 25.1 E(): 7.1 Smith-Waterman score: 78; 30.357% identity (57.143% similar) in 56 aa overlap (76-126:128-181) 50 60 70 80 90 100 FLJ000 MVDMSAVRATQAASQPLLLDVCFLLCLSCCEVKAPNTERCARDKGLQVALPTRG-----R . .:: . .. ::.:: . . : KIAA17 FLFVLANFSMATFMDPGIFPRAEEDEDKEDDFRAP-LYKTVEIKGIQVRMKWCATCRFYR 100 110 120 130 140 150 110 120 130 FLJ000 PGEAGRCSGCDGGCVCKLGVGQPWVSVTVACVI : . ..:: ::. :: .. :::. KIAA17 PPRCSHCSVCDN-CVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVL 160 170 180 190 200 210 >>FLJ00259 ( 659 res) sh04102 (659 aa) initn: 70 init1: 70 opt: 77 Z-score: 90.5 bits: 24.7 E(): 7.7 Smith-Waterman score: 77; 28.846% identity (50.000% similar) in 52 aa overlap (75-123:168-219) 50 60 70 80 90 100 FLJ000 TMVDMSAVRATQAASQPLLLDVCFLLCLSCCEVKAPN---TERCARDKGLQVALPTRGRP :. .: : ..: . .. : : .: FLJ002 PSAHGSCADWAARWYFVASVGQCNRFWYGGCHGNANNFASEQECMSSCQGSLHGPRRPQP 140 150 160 170 180 190 110 120 130 FLJ000 GEAGRCSGCDGGCVCKLGVGQPWVSVTVACVI : .:: . ::: : .: FLJ002 GASGRSTHTDGGGSSPAGEQEPSQHRTGAAVQRKPWPSGGLWRQDQQPGPGEAPHTQAFG 200 210 220 230 240 250 >>KIAA0657 ( 1237 res) hk01859s1 (1237 aa) initn: 74 init1: 74 opt: 79 Z-score: 90.2 bits: 25.6 E(): 7.9 Smith-Waterman score: 79; 27.273% identity (50.909% similar) in 55 aa overlap (73-124:1151-1201) 50 60 70 80 90 100 FLJ000 QKTMVDMSAVRATQAASQPLLLDVCFLLCLSCCEVKAPNTERCARDKGLQVALPTRGRPG ::: . . :.. :. . .. : . KIAA06 ATFRCEVSPPDADVTWLRNGAVVTPGPQRQSCCSYGG--CRMCGQRKARTCV--SKWRQA 1130 1140 1150 1160 1170 110 120 130 FLJ000 E---AGRCSGCDGGCVCKLGVGQPWVSVTVACVI : : :.::. : : .. :: KIAA06 EWVQRGPCAGCEVGSPCPTTLACPWPRMGTSTASSSMVSYWPTRAPTAARATTIAPWPGS 1180 1190 1200 1210 1220 1230 133 residues in 1 query sequences 2210861 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:31 2009 done: Fri Feb 27 10:32:31 2009 Total Scan time: 0.310 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]