# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00064.fasta.huge -Q ../query/FLJ00064.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00064, 276 aa vs ./tmplib.10216 library 2210718 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.5965+/-0.00355; mu= 18.5050+/- 0.241 mean_var=69.1476+/-15.313, 0's: 0 Z-trim: 0 B-trim: 31 in 1/39 Lambda= 0.154236 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1288 ( 1245 res) hh13551(revised) (1245) 91 29.7 1 FLJ00368 ( 299 res) sh06338 ( 299) 85 27.4 1.1 KIAA0190 ( 813 res) ha03225 ( 813) 88 28.7 1.3 KIAA0746 ( 1029 res) hk04140 (1029) 85 28.2 2.3 KIAA0690 ( 1214 res) hk03594 (1214) 80 27.2 5.4 KIAA0411 ( 1061 res) hg02120 (1061) 77 26.4 7.9 KIAA0149 ( 830 res) ha01221 ( 830) 76 26.1 8.1 KIAA0111 ( 412 res) ha00659 ( 412) 73 24.9 8.7 FLJ00021 ( 508 res) as00021 ( 508) 73 25.1 9.8 KIAA1061 ( 693 res) hj00491 ( 693) 74 25.5 10 KIAA1941 ( 1233 res) ah04470 (1233) 76 26.3 10 KIAA0251 ( 820 res) ha07028 ( 820) 74 25.6 11 FLJ00049 ( 133 res) as00049 ( 133) 67 22.9 12 KIAA1926 ( 412 res) hh10052 ( 412) 71 24.5 12 KIAA0951 ( 679 res) hj05306 ( 679) 72 25.0 13 KIAA0738 ( 941 res) hk03873 ( 941) 73 25.5 14 KIAA1811 ( 715 res) ha06731 ( 715) 72 25.1 14 KIAA0965 ( 489 res) hj06174s1 ( 489) 70 24.4 15 KIAA1665 ( 217 res) hk01809 ( 217) 67 23.2 15 KIAA1560 ( 662 res) fh19959 ( 662) 71 24.8 15 KIAA1260 ( 817 res) hh15752 ( 817) 71 24.9 17 KIAA1740 ( 1119 res) pj00674 (1119) 72 25.4 18 FLJ00075 ( 183 res) as00075 ( 183) 65 22.6 19 KIAA0074 ( 747 res) ha01438 ( 747) 70 24.7 19 KIAA1575 ( 1010 res) fj01374s1 (1010) 71 25.1 19 KIAA0816 ( 1950 res) af09475 (1950) 73 25.9 21 KIAA0954 ( 1183 res) hj05543s1 (1183) 71 25.2 21 KIAA1082 ( 1787 res) fg06837 (1787) 72 25.7 23 KIAA0982 ( 502 res) hj07125 ( 502) 67 23.7 25 KIAA0077 ( 1798 res) ha00919 (1798) 71 25.4 27 KIAA1663 ( 347 res) hk01115 ( 347) 65 23.0 27 KIAA0572 ( 1872 res) hh02391 (1872) 71 25.5 27 FLJ00135 ( 597 res) sh02493 ( 597) 66 23.6 31 FLJ00350 ( 601 res) sg00019 ( 601) 66 23.6 31 KIAA1767 ( 1960 res) eg01735 (1960) 70 25.3 33 KIAA1092 ( 1154 res) hk04417 (1154) 68 24.5 33 KIAA0375 ( 1540 res) hh00360s1 (1540) 69 24.9 33 KIAA1307 ( 1678 res) fh08302 (1678) 69 24.9 35 KIAA1491 ( 757 res) fj08187 ( 757) 66 23.8 36 KIAA1424 ( 1944 res) ha06448 (1944) 69 25.0 38 KIAA1864 ( 660 res) fj07836 ( 660) 65 23.5 39 KIAA1815 ( 881 res) ha00534 ( 881) 66 23.9 39 KIAA1133 ( 891 res) hg03758b ( 891) 66 23.9 39 FLJ00146 ( 522 res) sh05065 ( 522) 64 23.1 39 KIAA1858 ( 2469 res) ae00147 (2469) 69 25.2 43 KIAA1480 ( 682 res) fj05645 ( 682) 64 23.3 46 KIAA1805 ( 534 res) fk00014 ( 534) 63 22.9 47 KIAA1674 ( 538 res) fg03838 ( 538) 63 22.9 47 FLJ00258 ( 792 res) sj09927 ( 792) 64 23.4 50 KIAA1620 ( 1398 res) hj04150 (1398) 66 24.2 50 >>KIAA1288 ( 1245 res) hh13551(revised) (1245 aa) initn: 113 init1: 86 opt: 91 Z-score: 106.4 bits: 29.7 E(): 1 Smith-Waterman score: 91; 23.404% identity (59.574% similar) in 94 aa overlap (91-182:285-372) 70 80 90 100 110 120 FLJ000 FKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSNKDLHSGVYGGSVHEAMTDLI .: . . ::.. :: .. :. : . . KIAA12 QQRLVGEKETQALTPVSDGMEVPNDSALQEFFCLSHDESNSEPHS--QSSYRHKEMGQNL 260 270 280 290 300 310 130 140 150 160 170 FLJ000 LLMGS--LVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHSHKK : :.: . ...:..... : : . :::. . : .. .::.:.: .: . KIAA12 RETVSYCLIDDECPLMVPAFDKSEAQVLNPEHKVTETEDTQMVSKGKDLGTQ----NHTS 320 330 340 350 360 180 190 200 210 220 230 FLJ000 DILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQACGAGT .... KIAA12 ELILSSPPGQKVGSSFGLTWDANDMVISTDKTMCMSTPVLEPTKVTFSVSPIEATEKCKK 370 380 390 400 410 420 >>FLJ00368 ( 299 res) sh06338 (299 aa) initn: 32 init1: 32 opt: 85 Z-score: 105.3 bits: 27.4 E(): 1.1 Smith-Waterman score: 85; 23.316% identity (49.741% similar) in 193 aa overlap (27-211:33-219) 10 20 30 40 50 FLJ000 LYGRGSTDDKGPVAGWINALEAYQKTGQEIPVNVRFCLEGMEESGSEGLDELIFAR :: : : : .: ... : . ::. . FLJ003 AQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTELVVS- 10 20 30 40 50 60 60 70 80 90 100 110 FLJ000 KDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSNKDLHSGVYGGS--VHE .. . .: .:. . : :: . : : ..:: :: ..: FLJ003 --NITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLM-SLKRKEKGVIFGSPLTEE 70 80 90 100 110 120 130 140 150 160 FLJ000 AMTDLILLMGSL---VDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEF-AKDVGA- ..... :. : . .: . .:: : . . .. . :::.. :: ..::.. FLJ003 GIAQIYQLIEYLHKNLRVEGLFRVPG-NSVRQQILRDALNNGTDIDLESGEFHSNDVATL 120 130 140 150 160 170 170 180 190 200 210 220 FLJ000 -QILLHSHKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEV ...: . .: :. :.. . :. .: :: :: : FLJ003 LKMFLGELPEPLLTHKHFNAHLKIADLM-QFDDKGNKTNIPDKDRQIEALQLLFLILPPP 180 190 200 210 220 230 230 240 250 260 270 FLJ000 VGEQACGAGTRGGGQELLCPGRDLGNKGCYSTDTRAMHAPASWLWPSQ FLJ003 NRNLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHC 240 250 260 270 280 290 >>KIAA0190 ( 813 res) ha03225 (813 aa) initn: 47 init1: 47 opt: 88 Z-score: 104.6 bits: 28.7 E(): 1.3 Smith-Waterman score: 88; 27.778% identity (55.556% similar) in 72 aa overlap (191-261:203-273) 170 180 190 200 210 FLJ000 EEFAKDVGAQILLHSHKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVG-KFSIR :. . .. : :. .: :: . . : KIAA01 GYYSYLKDGGDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPSVTPRTCNSPQNSTD 180 190 200 210 220 230 220 230 240 250 260 270 FLJ000 LVPNMTPEVVGEQACGAGTRGGGQELLCPGRDLGNKGCYSTDTRAMHAPASWLWPSQ : ...:. : :. :: .:: :: :.: ..:. .. KIAA01 SVSDIVPDSPFPGALGSDTRTAGQPEGGPGADFG-QSCFPAEAGRDTLSRTAGAQPCVGT 240 250 260 270 280 290 KIAA01 DTTENLGVANGQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTLPV 300 310 320 330 340 350 >>KIAA0746 ( 1029 res) hk04140 (1029 aa) initn: 91 init1: 66 opt: 85 Z-score: 100.0 bits: 28.2 E(): 2.3 Smith-Waterman score: 93; 23.358% identity (53.285% similar) in 137 aa overlap (2-126:614-747) 10 20 30 FLJ000 LYGRGSTDDKGPVAGWINALEAYQKTGQEIP :..:. . . :. . :. .. :: . KIAA07 GNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFK--GQGVK 590 600 610 620 630 640 40 50 60 70 80 FLJ000 VNVRFCLEGMEESGSEGLDELIFARKDTFFKDVDYVCISDNYWLGKKK---PCITYGLRG : :. :: :....:.:: . . . . : . .::: .. : .:.: : KIAA07 KNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKAAKYWLKAEEMGNPDASYNL-G 650 660 670 680 690 700 90 100 110 120 130 FLJ000 ICYF---FIEVECSNKDL-----HSGVYGGSVHEAM-TDLILLMGSLVDKRGNILIPGIN . .. : : :. : :... :: .. .. .: . :.: KIAA07 VLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLETFPRDPEKAVVW 710 720 730 740 750 760 140 150 160 170 180 190 FLJ000 EAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHSHKKDILMHRWRYPSLSLHGIEGAF KIAA07 AKHVAEKNGYLGHVIRKGLNAYLEGSWHEALLYYVLAAETGIEVSQTNLAHICEERPDLA 770 780 790 800 810 820 >>KIAA0690 ( 1214 res) hk03594 (1214 aa) initn: 111 init1: 50 opt: 80 Z-score: 93.2 bits: 27.2 E(): 5.4 Smith-Waterman score: 80; 28.378% identity (55.405% similar) in 74 aa overlap (201-274:419-488) 180 190 200 210 220 230 FLJ000 ILLHSHKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVG : :. :. . . . ..:: :.. .. KIAA06 FRAVEEGLTYKFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCDLRLSPHFPHTAAL 390 400 410 420 430 440 240 250 260 270 FLJ000 EQACGAGTRGGGQELLCPGRDLGNKGCYSTDTRAMHAPASWLWPSQ .:: ::.. . : :.. . : : : .: . : ::: : KIAA06 DQAVGAAVTSMGPEVVLQAVPLEIDG--SEET--LDFPRSWLLPVIRDHVQETRLGFFTT 450 460 470 480 490 500 KIAA06 YFLPLANTLKSKAMDLAQAGSTVESKIYDTLQWQMWTLLPGFCTRPTDVAISFKGLARTL 510 520 530 540 550 560 >>KIAA0411 ( 1061 res) hg02120 (1061 aa) initn: 56 init1: 56 opt: 77 Z-score: 90.2 bits: 26.4 E(): 7.9 Smith-Waterman score: 77; 33.333% identity (54.167% similar) in 48 aa overlap (3-45:454-501) 10 20 30 FLJ000 LYGRGSTDDKGPVAGWINALEAYQKTGQEIPV :.: . : . : :: : .:: ::. KIAA04 FYFTKFKEYVNGSNLITKLQAKHDLLKQTLGEGERAECGTTRGRRNARTRNQDSGQAIPL 430 440 450 460 470 480 40 50 60 70 80 FLJ000 NVRFC-----LEGMEESGSEGLDELIFARKDTFFKDVDYVCISDNYWLGKKKPCITYGLR :. : : :....: KIAA04 VVESCIRYINLYGLQQQGIFRVPGSQVEVNDIKNSFERGEDPLVDDQNERDINSVAGVLK 490 500 510 520 530 540 >>KIAA0149 ( 830 res) ha01221 (830 aa) initn: 66 init1: 66 opt: 76 Z-score: 90.1 bits: 26.1 E(): 8.1 Smith-Waterman score: 76; 38.095% identity (52.381% similar) in 42 aa overlap (230-270:235-275) 200 210 220 230 240 250 FLJ000 SGSGAKTVIPRKVVGKFSIRLVPNMTPEVVGEQACGAGTRGGGQELLCPGRDLGNKGCYS :: .: : ::. :: ::. . : . : KIAA01 SGRCACRPGWWGPECQQQCECVRGRCSAASGECTCPPGFRGARCELPCPAGSHGVQ-CAH 210 220 230 240 250 260 260 270 FLJ000 TDTRAMHA-PASWLWPSQ . : : : : KIAA01 SCGRCKHNEPCSPDTGSCESCEPGWNGTQCQQPCLPGTFGESCEQQCPHCRHGEACEPDT 270 280 290 300 310 320 >>KIAA0111 ( 412 res) ha00659 (412 aa) initn: 80 init1: 50 opt: 73 Z-score: 89.5 bits: 24.9 E(): 8.7 Smith-Waterman score: 73; 28.916% identity (60.241% similar) in 83 aa overlap (116-197:234-310) 90 100 110 120 130 140 FLJ000 LRGICYFFIEVECSNKDLHSGVYGGSVHEAMTDLILLMGSLVDKRGNILIPGINEAVAAV ::: : . :: :: .. . ::.. .:: KIAA01 DVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI---LV-KRDELTLEGIKQFFVAV 210 220 230 240 250 150 160 170 180 190 200 FLJ000 TEEEHKLYDDIDFDIEEFAKDVGAQILLHSHKK-DILMHRWRYPSLSLHGIEGAFSGSGA .:: :. : :. . . : :. ....: : : .. : .... ...: KIAA01 EREEWKF--DTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKER 260 270 280 290 300 310 210 220 230 240 250 260 FLJ000 KTVIPRKVVGKFSIRLVPNMTPEVVGEQACGAGTRGGGQELLCPGRDLGNKGCYSTDTRA KIAA01 ESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGV 320 330 340 350 360 370 >>FLJ00021 ( 508 res) as00021 (508 aa) initn: 114 init1: 73 opt: 73 Z-score: 88.6 bits: 25.1 E(): 9.8 Smith-Waterman score: 73; 57.895% identity (78.947% similar) in 19 aa overlap (191-209:432-450) 170 180 190 200 210 220 FLJ000 EEFAKDVGAQILLHSHKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRL :: :: ::..:.: . ::: FLJ000 TYPWVVDRVVFPTITLVPPVLVAFCTHDLESLVGITGAYAGTGIQYVIPAFLVYHCRRDT 410 420 430 440 450 460 230 240 250 260 270 FLJ000 VPNMTPEVVGEQACGAGTRGGGQELLCPGRDLGNKGCYSTDTRAMHAPASWLWPSQ FLJ000 QLAFGCGVSNKHRSPFRHTFWVGFVLLWAFSCFIFVTANIILSETKL 470 480 490 500 >>KIAA1061 ( 693 res) hj00491 (693 aa) initn: 77 init1: 50 opt: 74 Z-score: 88.4 bits: 25.5 E(): 10 Smith-Waterman score: 74; 19.835% identity (52.893% similar) in 121 aa overlap (123-243:232-350) 100 110 120 130 140 150 FLJ000 FIEVECSNKDLHSGVYGGSVHEAMTDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKL ... ..:. ..: : . ...: :. KIAA10 AQEPGVAASLRCHAEGIPMPRITWLKNGVDVSTQMSKQLSLLANGSELHISSVRYEDTGA 210 220 230 240 250 260 160 170 180 190 200 210 FLJ000 YDDIDFDIEEFAKDVGAQILLHSHKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKV : : . .:... .. : .: . :: .::. .. .:: .: .. : : KIAA10 YTCIAKNEVGVDEDISSLFIEDSARKTLANILWREEGLSVGNMFYVFSDDGIIVIHP--V 270 280 290 300 310 220 230 240 250 260 270 FLJ000 VGKFSIRLVPNMTPEVVGEQACGAGTRGGGQELLCPGRDLGNKGCYSTDTRAMHAPASWL ... .: :. . :. : ... : KIAA10 DCEIQRHLKPTEKIFMSYEEICPQREKNATQPCQWVSAVNVRNRYIYVAQPALSRVLVVD 320 330 340 350 360 370 FLJ000 WPSQ KIAA10 IQAQKVLQSIGVDPLPAKLSYDKSHDQVWVLSWGDVHKSRPSLQVITEASTGQSQHLIRT 380 390 400 410 420 430 276 residues in 1 query sequences 2210718 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:31 2009 done: Fri Feb 27 10:32:32 2009 Total Scan time: 0.420 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]