# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00072.fasta.huge -Q ../query/FLJ00072.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00072, 204 aa vs ./tmplib.10216 library 2210790 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 6.5279+/-0.00688; mu= 10.6240+/- 0.466 mean_var=296.7199+/-65.189, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.074456 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00349 ( 146 res) sg00018 ( 146) 604 75.9 1e-15 KIAA1523 ( 687 res) fh16681(revised) ( 687) 144 27.7 1.6 KIAA1883 ( 1480 res) fh02249 (1480) 149 28.8 1.6 FLJ00295 ( 770 res) sh03877 ( 770) 144 27.8 1.7 KIAA1931 ( 514 res) fj14393 ( 514) 136 26.6 2.5 FLJ00201 ( 705 res) sj04110 ( 705) 135 26.7 3.2 KIAA0910 ( 1315 res) hg02207s1 (1315) 139 27.6 3.2 KIAA1856 ( 1134 res) fh03203 (1134) 138 27.4 3.2 KIAA0269 ( 567 res) ha06751 ( 567) 131 26.1 3.9 KIAA1442 ( 627 res) hh10127b ( 627) 128 25.9 5.1 KIAA0298 ( 901 res) hf00341(revised) ( 901) 129 26.3 5.6 FLJ00086 ( 399 res) as00086 ( 399) 123 25.0 5.9 FLJ00222 ( 656 res) sj06165 ( 656) 125 25.6 6.5 FLJ00417 ( 600 res) sj06336 ( 600) 124 25.4 6.7 KIAA1810 ( 579 res) fk03376 ( 579) 121 25.1 8.2 FLJ00414 ( 1129 res) sg00016 (1129) 125 26.0 8.4 KIAA1120 ( 1024 res) hg02941 (1024) 124 25.8 8.6 KIAA1908 ( 445 res) ah02604 ( 445) 117 24.5 9.7 KIAA1029 ( 1015 res) fh00363 (1015) 122 25.6 10 KIAA1760 ( 2219 res) af00030 (2219) 125 26.5 12 FLJ00281 ( 1495 res) sh01915 (1495) 122 25.9 12 KIAA1802 ( 821 res) fj21631 ( 821) 114 24.6 16 FLJ00089 ( 349 res) as00089 ( 349) 108 23.3 17 KIAA0268 ( 1193 res) ha07061 (1193) 115 25.0 18 KIAA1986 ( 334 res) pg00636 ( 334) 106 23.1 19 KIAA0775 ( 639 res) hk05255 ( 639) 110 24.0 19 KIAA1471 ( 1421 res) fj02383s1 (1421) 115 25.1 20 KIAA0595 ( 1666 res) hj02929s1 (1666) 115 25.2 21 KIAA1461 ( 1498 res) fh17578 (1498) 114 25.0 22 KIAA0669 ( 825 res) hk02346 ( 825) 110 24.2 22 KIAA1555 ( 2414 res) fh17482s2 (2414) 117 25.7 22 KIAA0666 ( 1085 res) hk02075 (1085) 110 24.4 25 FLJ00280 ( 440 res) sh01728 ( 440) 103 22.9 27 FLJ00330 ( 246 res) sj03258 ( 246) 99 22.1 28 KIAA1249 ( 949 res) hh04184 ( 949) 107 23.9 29 FLJ00296 ( 187 res) sh03944 ( 187) 96 21.6 30 KIAA0306 ( 1451 res) hg00063 (1451) 109 24.5 31 FLJ00053 ( 443 res) as00053 ( 443) 101 22.7 32 KIAA0284 ( 1573 res) pf09542 (1573) 109 24.5 32 KIAA0407 ( 2143 res) hg01339 (2143) 111 25.0 32 FLJ00153 ( 497 res) sh06127 ( 497) 101 22.8 33 FLJ00104 ( 287 res) as00104 ( 287) 97 22.0 35 KIAA0280 ( 291 res) ha06179 ( 291) 97 22.0 35 KIAA0450 ( 1182 res) hj05822 (1182) 106 24.0 35 FLJ00283 ( 500 res) sh02088 ( 500) 100 22.7 36 KIAA0495 ( 209 res) hg00106 ( 209) 93 21.3 40 KIAA0182 ( 1157 res) ha02329s1 (1157) 104 23.8 40 KIAA1439 ( 561 res) hg01641b ( 561) 99 22.7 41 KIAA1717 ( 420 res) pf00208 ( 420) 97 22.3 41 KIAA1211 ( 803 res) fh00041 ( 803) 101 23.2 42 >>FLJ00349 ( 146 res) sg00018 (146 aa) initn: 615 init1: 588 opt: 604 Z-score: 375.6 bits: 75.9 E(): 1e-15 Smith-Waterman score: 604; 72.951% identity (77.049% similar) in 122 aa overlap (1-119:16-137) 10 20 30 40 FLJ000 SPQCKRAACFLSAGSVGSEPGPSVQCLCTQIIACVTEDSVLSCHL ::::::::::::::::::::::::::::::::::::::::::::: FLJ003 LPGDFDPLLHPFMFLSPQCKRAACFLSAGSVGSEPGPSVQCLCTQIIACVTEDSVLSCHL 10 20 30 40 50 60 50 60 70 80 90 100 FLJ000 LPSCCPVPGRTRMPPSLSGPWQSLRPGSKGRGRGPLVGEGRGPPGVGPGNSRARPSWVCW ::::::::::::::::::::::::::::.:::::: .: : : . : : FLJ003 LPSCCPVPGRTRMPPSLSGPWQSLRPGSEGRGRGPAGRRGLGAPDTLAPREGAGVRWSAR 70 80 90 100 110 120 110 120 130 140 150 160 FLJ000 ---PKALALTPPRLPPPNRPASAALATRRCWCCRLPRALVPPGPGTSRPRRVGLGSWKAG : . .: : :: FLJ003 AGGPLVSGLGTAGLGPPGCVGPRLWP 130 140 >>KIAA1523 ( 687 res) fh16681(revised) (687 aa) initn: 56 init1: 56 opt: 144 Z-score: 102.7 bits: 27.7 E(): 1.6 Smith-Waterman score: 144; 28.662% identity (49.045% similar) in 157 aa overlap (36-186:165-312) 10 20 30 40 50 60 FLJ000 RAACFLSAGSVGSEPGPSVQCLCTQIIACVTEDSVLSCHLLPSCCPVPGRTRMPPSLSGP : :.. . : :: :. : : : KIAA15 MPSHWDSEQTEKADIKPVIVTDSSVTTSLQTADKTPTPSHYPLSCPSGISTQNSLSCSPP 140 150 160 170 180 190 70 80 90 100 110 FLJ000 WQSLRPGSKGRGRGPLVGEGRGPP-GV--GPGNSRAR---PSWVCWPKALALTPPRLPPP :: :. . : . . ... : :. :: :.... : : . : ::: KIAA15 HQS--PALEDIGCSSCAEKSKKTPCGTANGPVNTEVKANGPHLYSSPTD-STDPRRLPGA 200 210 220 230 240 250 120 130 140 150 160 170 FLJ000 NRPASAALATRRCWCCRLPRALVPPGPGTSRPRRVGLGSWKAGRGRRETGFPERDGVPQA : : . :. :. : :: :.::. : . . ::. :. . .. :.:. :: KIAA15 NTPLPG-LSHRQGW----PRPLTPPAAGGLQNHTVGI-IVKTENATGPSSCPQRSLVPVP 260 270 280 290 300 180 190 200 FLJ000 QLAPPPPRFLPLPHALLLPPTPLLA .: : : KIAA15 SLPPSIPSSCASIENTSTLQRKTVQSQIGPPLTDSRPLGSPPNATRVLTPPQAAGDGILA 310 320 330 340 350 360 >>KIAA1883 ( 1480 res) fh02249 (1480 aa) initn: 121 init1: 78 opt: 149 Z-score: 102.7 bits: 28.8 E(): 1.6 Smith-Waterman score: 161; 29.798% identity (43.939% similar) in 198 aa overlap (12-201:676-859) 10 20 30 40 FLJ000 SPQCKRAACFLSAGSVGSEPGPSVQC-LCTQIIACVTEDSV : :. :. :: . : ::.. :: KIAA18 AEVLGERGTAPWVEEEEEEEEGSSPGEDSSSLGGGPSRRGP-LPCPLCSREGAC------ 650 660 670 680 690 50 60 70 80 90 100 FLJ000 LSCHLLPSCCPVPGRTRMPPSLSGPWQSLRPGSKGRGRGPLVGEGRGPPGVGPGNSRARP :: : : : : .:. : .: :: :. .::. .: . KIAA18 -SCLPLERGDAVAGWGGHP-ALGCPHPPEDDSSLRAERGSLADLPMAPPASAPPEFLDPL 700 710 720 730 740 750 110 120 130 140 150 FLJ000 SWVCWPKALALTPPRLPPPNRPASAALATRRCWCCRLPRALVPPGPGTSRPR-RVGLGSW . :. . :: ::: : : : : :.. :: : : : . : ... KIAA18 MGAAAPQYPGRGPPPAPPPPPPPPRAPADPAA-SPDPPSAVASPGSGLSSPGPKPGDSGY 760 770 780 790 800 810 160 170 180 190 200 FLJ000 KAGRGRRETG-FP-----ERDGVPQAQLAPPPPRFLPLPHALLLPPTPLLA .. : :: :..:::. . ::: : : : : :: : KIAA18 ETETPFSPEGAFPGGGAAEEEGVPRPR-APPEP---PDPGAPRPPPDPGPLPLPGPREKP 820 830 840 850 860 870 KIAA18 TFVVQVSTEQLLMSLREDVTRNLLGEKGATARETGPRKAGRGPGNREKVPGLNRDPTVLG 880 890 900 910 920 930 >>FLJ00295 ( 770 res) sh03877 (770 aa) initn: 56 init1: 56 opt: 144 Z-score: 102.2 bits: 27.8 E(): 1.7 Smith-Waterman score: 144; 28.662% identity (49.045% similar) in 157 aa overlap (36-186:403-550) 10 20 30 40 50 60 FLJ000 RAACFLSAGSVGSEPGPSVQCLCTQIIACVTEDSVLSCHLLPSCCPVPGRTRMPPSLSGP : :.. . : :: :. : : : FLJ002 MPSHWDSEQTEKADIKPVIVTDSSVTTSLQTADKTPTPSHYPLSCPSGISTQNSLSCSPP 380 390 400 410 420 430 70 80 90 100 110 FLJ000 WQSLRPGSKGRGRGPLVGEGRGPP-GV--GPGNSRAR---PSWVCWPKALALTPPRLPPP :: :. . : . . ... : :. :: :.... : : . : ::: FLJ002 HQS--PALEDIGCSSCAEKSKKTPCGTANGPVNTEVKANGPHLYSSPTD-STDPRRLPGA 440 450 460 470 480 120 130 140 150 160 170 FLJ000 NRPASAALATRRCWCCRLPRALVPPGPGTSRPRRVGLGSWKAGRGRRETGFPERDGVPQA : : . :. :. : :: :.::. : . . ::. :. . .. :.:. :: FLJ002 NTPLPG-LSHRQGW----PRPLTPPAAGGLQNHTVGI-IVKTENATGPSSCPQRSLVPVP 490 500 510 520 530 540 180 190 200 FLJ000 QLAPPPPRFLPLPHALLLPPTPLLA .: : : FLJ002 SLPPSIPSSCASIENTSTLQRKTVQSQIGPPLTDSRPLGSPPNATRVLTPPQAAGDGILA 550 560 570 580 590 600 >>KIAA1931 ( 514 res) fj14393 (514 aa) initn: 104 init1: 54 opt: 136 Z-score: 99.1 bits: 26.6 E(): 2.5 Smith-Waterman score: 136; 27.273% identity (48.485% similar) in 198 aa overlap (7-192:183-373) 10 20 30 FLJ000 SPQCKRAACFLSAGSVG-SEPG---PSVQCLCTQII ..: :: : : :. : : : : . . KIAA19 DRELDRVNSFLSSRLQEIKNTVKDSIRASFSVCELSMDSNGFSKEGAAEPEPQSLPPSNL 160 170 180 190 200 210 40 50 60 70 80 90 FLJ000 ACVTEDSV-LSCHLLPSCCPVPGRTRMPPSLSGPWQSLRPGSKGRGRGPLVGEGRGPP-G . .:.. .. : : : . .:..: . : .. :: : : :::: : KIAA19 SGSSEQQPDINLDLSPLTLGSP----QNHTLQAPGEPAPPWAEMRGPHPPWTEVRGPPPG 220 230 240 250 260 100 110 120 130 140 FLJ000 VGPGNSRARPSWVCWPKALALTPPRLPPPNRPASAALATRRCWCCR--LPRALVPPGPGT . : :. .: :. . . : :. :.: .... :. ::. : : KIAA19 IVPENGLVR-RLNTVPNLSRVIWVKTPKPGYPSSEEPSSKEVPSCKQELPEP-VSSGGKP 270 280 290 300 310 320 150 160 170 180 190 200 FLJ000 SRPRRVGLGSWKAGRGRRETGFPERDGVPQA--QLAPP--PPRFLPLPHALLLPPTPLLA .. .: : .. : ... : ::.: :.: : : : : :: KIAA19 QKGKRQG-SQAKKSEASPAPRPPASLEVPSAKGQVAGPKQPGRVLELPKVGSCAEAGEGS 330 340 350 360 370 380 KIAA19 RGSRPGPGWAGSPKTEKEKGSSWRNWPGEAKARPQEQESVQPPGPARPQSLPQGKGRSRR 390 400 410 420 430 440 >>FLJ00201 ( 705 res) sj04110 (705 aa) initn: 120 init1: 81 opt: 135 Z-score: 97.4 bits: 26.7 E(): 3.2 Smith-Waterman score: 148; 35.971% identity (50.360% similar) in 139 aa overlap (53-186:303-424) 30 40 50 60 70 80 FLJ000 SVQCLCTQIIACVTEDSVLSCHLLPSCCPVPGRTRMPPSLSGPWQSLRPGSKGRGRGPLV :: :: ::.: :: :: : .: FLJ002 PKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPG-TRGPPGLIGPTGYGMPGLPG-PKGD-- 280 290 300 310 320 90 100 110 120 130 FLJ000 GEGRGPPGVGPG--NSRARPSWVCWPKALALTPPRLP-PPNRPASAALATRRCWCCRLPR ::: :: :: ..:..:. : . : : ::. :.::.: :: :. FLJ002 ---RGPAGV-PGLLGDRGEPGEDGEPGEQG--PQGLGGPPGLPGSAGLPGRRGPPG--PK 330 340 350 360 370 380 140 150 160 170 180 190 FLJ000 ALVPPG--PGTSRPRRVGLGSWKAGRGRRETGFPERDGVPQAQLAPPPPRFLPLPHALLL . . :: ::. : : ::. : : . :.: :. .:: : FLJ002 GEAGPGGPPGVPGIRGDQGPSGLAGK----PGVPGERGLPGAH-GPPGPTGPKGEPGFTG 390 400 410 420 430 200 FLJ000 PPTPLLA FLJ002 RPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPG 440 450 460 470 480 490 >>KIAA0910 ( 1315 res) hg02207s1 (1315 aa) initn: 84 init1: 59 opt: 139 Z-score: 97.3 bits: 27.6 E(): 3.2 Smith-Waterman score: 139; 29.412% identity (47.712% similar) in 153 aa overlap (47-190:1078-1225) 20 30 40 50 60 70 FLJ000 GSEPGPSVQCLCTQIIACVTEDSVLSCHLLPSCCPVPGRTRMPPSLSGPWQSL--RPG-S :: : . . : :: :: ::. . KIAA09 EGDVDDYSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRA 1050 1060 1070 1080 1090 1100 80 90 100 110 120 130 FLJ000 KGRGRGPLVGEGRGPPGVGPGNSRARPSWVCWPKALALTPPRLPPPNRPASAALATRRCW .: :: ... .: . :.. :: : : : ::. ::: : . ::. . KIAA09 PSRTPGPPSAQS-SPIDAQPATPPPRP--VAPPTRPA--PPQRPPPPSGARSPAPTRKEF 1110 1120 1130 1140 1150 1160 140 150 160 170 180 FLJ000 CC-RLPRALVPPGPGTSRPR-RVGL-GSWKAGRGRRETGFPERDGV---PQAQLAPPPPR . : . . : :.: ..:: : :: . . .: : :: ::.. : KIAA09 GAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGR 1170 1180 1190 1200 1210 1220 190 200 FLJ000 FLPLPHALLLPPTPLLA . : KIAA09 LTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQP 1230 1240 1250 1260 1270 1280 >>KIAA1856 ( 1134 res) fh03203 (1134 aa) initn: 113 init1: 90 opt: 138 Z-score: 97.3 bits: 27.4 E(): 3.2 Smith-Waterman score: 146; 32.353% identity (39.706% similar) in 136 aa overlap (70-201:926-1038) 40 50 60 70 80 90 FLJ000 VLSCHLLPSCCPVPGRTRMPPSLSGPWQSLRPGSKGRGRGPLVGEGRGPPGVG--PGNSR : .::. :: : : :: . :...: KIAA18 APATKTSRCAKGGPLSPRKDAGRAKDRKDPRKKKKGKEAGP--GAGLPPPRAPALPSEAR 900 910 920 930 940 950 100 110 120 130 140 150 FLJ000 ARPSWVCWPKALALTPPRLPPPNRPASAALATRRCWCCRLPRALVPPGPGTSRPRRVGLG : : : : :: :::: : ::: :: : : : KIAA18 APPPPPPPPPHPPLPPPPLPPPPLPL------------RLPPLPPPPLPRPHPPPPPPLP 960 970 980 990 1000 160 170 180 190 200 FLJ000 SWKAGRGRRETGFPERDGVPQAQLA--PPPPRFLPLPHALLLPPTPLLA :. .: :. ::::: : ::. :: : KIAA18 PLLPP--------PQTRTLPAARTMRQPPPPR-LALPRRRRSPPRPPSRPARRGPRPTPQ 1010 1020 1030 1040 1050 KIAA18 ARRRPRPSPRRLLRSPHSLCSPRLRPGPRADPRRERASTSPPPRSWPSGSACRPWRTGPR 1060 1070 1080 1090 1100 1110 >>KIAA0269 ( 567 res) ha06751 (567 aa) initn: 187 init1: 92 opt: 131 Z-score: 95.9 bits: 26.1 E(): 3.9 Smith-Waterman score: 131; 27.338% identity (43.165% similar) in 139 aa overlap (70-202:315-451) 40 50 60 70 80 90 FLJ000 VLSCHLLPSCCPVPGRTRMPPSLSGPWQSLRPGSKGRGRGPLVGEGRGPPGVGPGNSRAR :: : . :: :. :: : : KIAA02 EPPPPPPMHGAGDAKPIPTCISSATGLIENRPQSPATGRTPVFVSPTPPPPPPPLPSALS 290 300 310 320 330 340 100 110 120 130 140 150 FLJ000 PSWVCWPKALALTPPRLPPPNRPASAALATRRCWCCRLPRALVP----PGPGTSRPRRVG : . . . :: .::: : ..:: . : ..: :.: : : KIAA02 TSSL-RASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQ 350 360 370 380 390 400 160 170 180 190 200 FLJ000 LGSWKAGRGRRETGFPERDGVPQAQLA--PPPPRFLPLPHALLLPPTPLLA : ..:. .::... :::: ::: . : .:. KIAA02 -PSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSG 410 420 430 440 450 460 KIAA02 LHPTPSTAPGPHVPLMPPSPPSQVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKV 470 480 490 500 510 520 >>KIAA1442 ( 627 res) hh10127b (627 aa) initn: 121 init1: 70 opt: 128 Z-score: 93.7 bits: 25.9 E(): 5.1 Smith-Waterman score: 144; 31.818% identity (42.208% similar) in 154 aa overlap (70-186:1-143) 40 50 60 70 80 90 FLJ000 VLSCHLLPSCCPVPGRTRMPPSLSGPWQSLRPGSKGRGRGPLVGEGRG---------PPG :: : : :: ::. : ::: KIAA14 RPRRGGAGTGPR-GESAGLLLLLLQVLPPG 10 20 100 110 120 130 FLJ000 V--GPGNSRARPSW---VCWPKA-------------LALTPPRLPPPNRPASAALATRRC . ::: .: . :::: : : :: ::: : :: :.: KIAA14 ATAGPGRRGTRGAGGGGVCWPGAAPAFPRDARLLLLLPPLPPLSPPPPSSAPAASASRM- 30 40 50 60 70 80 140 150 160 170 180 FLJ000 WCCRLPRA--------LVPPGPGTSRPRRVGLGSWKAGRGRRETGFPERDGV--PQAQLA :::. :.: : :. : :: : : ... ..:: .:.. KIAA14 --DALPRSGLNLKEEPLLPAGLGSVR-------SWMQGAGILDASTAAQSGVGLARAHFE 90 100 110 120 130 190 200 FLJ000 PPPPRFLPLPHALLLPPTPLLA :: KIAA14 KQPPSNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGAEKTNNGIHYRLRLV 140 150 160 170 180 190 204 residues in 1 query sequences 2210790 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:39 2009 done: Fri Feb 27 10:32:40 2009 Total Scan time: 0.380 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]