# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00074.fasta.huge -Q ../query/FLJ00074.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00074, 191 aa vs ./tmplib.10216 library 2210803 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.4945+/-0.00408; mu= 7.1545+/- 0.275 mean_var=97.2807+/-21.527, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.130035 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0845 ( 1034 res) hk05234s1 (1034) 127 33.8 0.034 KIAA1229 ( 696 res) fh05775 ( 696) 94 27.4 1.8 KIAA1793 ( 1270 res) fj07087 (1270) 96 28.0 2.2 KIAA1765 ( 608 res) fj12188(revised) ( 608) 86 25.8 4.7 KIAA1530 ( 794 res) hj05130(revised) ( 794) 83 25.4 8.5 KIAA0204 ( 1164 res) ha02801 (1164) 85 25.9 8.6 KIAA1986 ( 334 res) pg00636 ( 334) 78 24.1 8.7 KIAA1629 ( 1329 res) fh20517 (1329) 84 25.8 11 KIAA1903 ( 1014 res) hk10325 (1014) 82 25.3 11 KIAA1261 ( 787 res) hh15855b ( 787) 80 24.8 12 FLJ00308 ( 233 res) sh05935 ( 233) 73 23.0 13 KIAA1772 ( 752 res) pj02583(revised) ( 752) 79 24.6 14 FLJ00367 ( 75 res) sh06256 ( 75) 66 21.2 14 KIAA0226 ( 973 res) fg02838 ( 973) 80 24.9 14 KIAA0980 ( 1406 res) hj07083 (1406) 82 25.4 15 KIAA0661 ( 1030 res) hk01952 (1030) 80 24.9 15 KIAA1472 ( 601 res) fj03211 ( 601) 77 24.1 15 KIAA1872 ( 434 res) hj05518 ( 434) 75 23.6 16 KIAA0162 ( 1730 res) ha03982 (1730) 82 25.5 17 KIAA0301 ( 3210 res) hf00402s1 (3210) 85 26.3 18 KIAA0775 ( 639 res) hk05255 ( 639) 76 24.0 18 FLJ00258 ( 792 res) sj09927 ( 792) 77 24.3 18 KIAA1647 ( 159 res) hh10062 ( 159) 68 21.9 19 FLJ00081 ( 333 res) as00081 ( 333) 72 23.0 19 KIAA1081 ( 1003 res) bg00262 (1003) 78 24.5 19 KIAA0581 ( 1218 res) pf10976 (1218) 79 24.8 19 KIAA0969 ( 1091 res) hj06525 (1091) 78 24.6 20 KIAA1813 ( 673 res) ph00819b ( 673) 75 23.8 21 KIAA1610 ( 484 res) fj11544 ( 484) 73 23.3 22 KIAA1015 ( 841 res) hk03609(revised) ( 841) 75 23.9 25 KIAA0699 ( 847 res) hg00621(revised) ( 847) 75 23.9 25 KIAA1342 ( 426 res) fj00418 ( 426) 71 22.9 26 KIAA0092 ( 475 res) ha01343 ( 475) 71 22.9 28 KIAA1319 ( 1208 res) fh13717 (1208) 76 24.2 28 FLJ00300 ( 283 res) sh04156 ( 283) 68 22.2 28 KIAA1042 ( 1019 res) fh02877 (1019) 75 24.0 29 KIAA0312 ( 3192 res) ff01724 (3192) 81 25.6 30 KIAA0855 ( 632 res) hk06219 ( 632) 72 23.2 30 KIAA0687 ( 1175 res) hk02992 (1175) 75 24.0 32 KIAA0339 ( 1709 res) hg01304(revised) (1709) 77 24.6 32 KIAA1074 ( 1715 res) hj06637 (1715) 77 24.6 32 KIAA0390 ( 1312 res) hj00075 (1312) 75 24.1 34 KIAA1296 ( 815 res) fg03576 ( 815) 72 23.3 36 KIAA1672 ( 395 res) hj02515 ( 395) 68 22.3 36 KIAA1052 ( 1456 res) hh04964 (1456) 75 24.1 37 KIAA1821 ( 609 res) fh12913 ( 609) 70 22.8 38 KIAA1176 ( 1101 res) hg02851a (1101) 73 23.6 39 KIAA0278 ( 460 res) ha06634 ( 460) 68 22.4 40 FLJ00120 ( 1171 res) as00120 (1171) 73 23.7 41 KIAA1547 ( 863 res) fh14154 ( 863) 71 23.2 42 >>KIAA0845 ( 1034 res) hk05234s1 (1034 aa) initn: 122 init1: 122 opt: 127 Z-score: 132.8 bits: 33.8 E(): 0.034 Smith-Waterman score: 127; 31.429% identity (68.571% similar) in 70 aa overlap (93-162:356-425) 70 80 90 100 110 120 FLJ000 TLLLWEDFTNCNPTIDLQGEQEENLGNLIHETESFFKTRDKEYQETIGQIELELATAKSD : :. .. :::.: :.. :: ..: . KIAA08 ITEYRRQLQARTTELEALKSTKDSLERQRSELEDRHQADIASYQEAIQQLDAELRNTKWE 330 340 350 360 370 380 130 140 150 160 170 180 FLJ000 MNRHLHEYMEMCSMKRGLDVQMETCRRLIKGSADRNSPSPSSVASSDSGSTDEIQDEFER : .:.::... ..: .::... . :.:..: : . .: KIAA08 MAAQLREYQDLLNVKMALDIEIAAYRKLLEGEECRIGFGPIPFSLPEGLPKIPSVSTHIK 390 400 410 420 430 440 190 FLJ000 EADVEPMVS KIAA08 VKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGG 450 460 470 480 490 500 >>KIAA1229 ( 696 res) fh05775 (696 aa) initn: 67 init1: 67 opt: 94 Z-score: 101.6 bits: 27.4 E(): 1.8 Smith-Waterman score: 94; 27.632% identity (63.158% similar) in 76 aa overlap (89-158:495-570) 60 70 80 90 100 110 FLJ000 ENEDTLLLWEDFTNCNPTIDLQGEQEENLGNLIHETESFFKTRDKEYQETIGQIELELAT ::.:..... ::..:. .. ::.: .: KIAA12 EKKQKTLIEMYKTQVQKLQEAAEIVKSRCENLLHKNNQITKTKNKNVEKMRGQMESHLKE 470 480 490 500 510 520 120 130 140 150 160 170 FLJ000 AK------SDMNRHLHEYMEMCSMKRGLDVQMETCRRLIKGSADRNSPSPSSVASSDSGS . . .:.::: .: . .: ...: : ..:..: : KIAA12 LERVCDSLTAAERRLHECQESLQCCKGKCADQEHTIRELQGQVDGNHNLLTKLSLEEENC 530 540 550 560 570 580 180 190 FLJ000 TDEIQDEFEREADVEPMVS KIAA12 LIQLKCENLQQKLEQMDAENKELEKKLANQEECLKHSNLKFKEKSAEYTALARQLEAALE 590 600 610 620 630 640 >>KIAA1793 ( 1270 res) fj07087 (1270 aa) initn: 46 init1: 46 opt: 96 Z-score: 100.3 bits: 28.0 E(): 2.2 Smith-Waterman score: 104; 24.074% identity (53.241% similar) in 216 aa overlap (1-182:139-348) 10 20 30 FLJ000 KERKVASDDDISEQDGEVNRFSDDEVGSMN .:..: ... .. : :. .: .. ... KIAA17 WGSLERRGMQAMEGEVLLPALYEEEEEEEEEEEEVEEEEEQVQKGGSVGSLSVNKHRGLS 110 120 130 140 150 160 40 50 60 70 FLJ000 ITD-EMKRMFNQLRETFDFDDDCDSLTWEENEDTLLLW---ED-----------FTNCNP .:. :.... :. . .. :. ....:.: : :: :: . KIAA17 LTETELEELRAQVLQLVAELEETRELAGQHEDDSLELQGLLEDERLASAQQAEVFT--KQ 170 180 190 200 210 220 80 90 100 110 FLJ000 TIDLQGEQE---ENLGNLIHETESFFKTRDKEYQETIGQI--------------ELELAT .:::: . :... : :: :: .: ..: . . ..: : ..:. KIAA17 IQQLQGELRSLREEISLLEHEKESELKEIEQELHLAQAEIQSLRQAAEDSATEHESDIAS 230 240 250 260 270 280 120 130 140 150 160 170 FLJ000 AKSDMNRHLHEYMEMCSMKRGLDVQMETCRRLIKGSADRNSPSPS-SVASSD-SGSTDEI . :. : .: .: . :: : .:: ... . .: :: :.. :: :: .:. KIAA17 LQEDLCRMQNELEDMERI-RG-DYEMEIAS--LRAEMEMKSSEPSGSLGLSDYSGLQEEL 290 300 310 320 330 340 180 190 FLJ000 QDEFEREADVEPMVS :. :: KIAA17 QELRERYHFLNEEYRALQESNSSLTGQLADLESERTQRATERWLQSQTLSMTSAESQTSE 350 360 370 380 390 400 >>KIAA1765 ( 608 res) fj12188(revised) (608 aa) initn: 37 init1: 37 opt: 86 Z-score: 94.2 bits: 25.8 E(): 4.7 Smith-Waterman score: 88; 21.519% identity (55.063% similar) in 158 aa overlap (37-178:34-186) 10 20 30 40 50 60 FLJ000 SDDDISEQDGEVNRFSDDEVGSMNITDEMKRMFNQLRETFDFDDDCDSLT-WEENEDTLL : ... : ...:: . : ... KIAA17 FSKALKGDHRCGETETPKSCSEVAGCKAAMRHQGKIPEELSLDDRARTQKKWGRGK---- 10 20 30 40 50 70 80 90 100 110 FLJ000 LWEDFTNCNPTIDLQGEQ-----EENLGNLIHETESFFKT-----RDKEYQETIGQIELE :: . .: . :. :..:: :..: . . :..: :... . .: KIAA17 -WEPEPSSKPPREATLEERHARGEKHLGVEIEKTSGEIIRCEKCKRERELQQSLERERLS 60 70 80 90 100 110 120 130 140 150 160 170 FLJ000 LATAKSDMNR----HLHEYMEMCSMKRGLDVQMETCRRLIKGSADRNSP-SPSSVASSDS :.:.. ::.. ... .. : .:. ... . .. ::.. :.:: .:.. : KIAA17 LGTSELDMGKGPMYDVEKLVRTRSCRRSPEANPASGEEGWKGDSHRSSPRNPTQELRRPS 120 130 140 150 160 170 180 190 FLJ000 GSTDEIQDEFEREADVEPMVS : :. .: KIAA17 KSMDKKEDRGPEDQESHAQGAAKAKKDLVEVLPVTEEGLREVKKDTRPMSRSKHGGWLLR 180 190 200 210 220 230 >>KIAA1530 ( 794 res) hj05130(revised) (794 aa) initn: 53 init1: 53 opt: 83 Z-score: 89.7 bits: 25.4 E(): 8.5 Smith-Waterman score: 83; 30.263% identity (52.632% similar) in 76 aa overlap (59-134:211-284) 30 40 50 60 70 80 FLJ000 MNITDEMKRMFNQLRETFDFDDDCDSLTWEENEDTLLLWEDFTNCNPTIDLQGEQEENLG : : : : : .:.: . ..:. KIAA15 AQPLPPPREAAQRLRQATTRAVEGWNEKFGEAYKKLALGYHFLRHNKKVDFQDTNARSLA 190 200 210 220 230 240 90 100 110 120 130 140 FLJ000 NLIHETESFFKTRDKEYQETIGQIELELATAKSDMNRHLHEYMEMCSMKRGLDVQMETCR . .: :. : :: ::: .: : :. ..... : : .: : KIAA15 ERKREEEKQ-KHLDKIYQERASQAEREMQEMSGEIESCLTE-VESCFRLLVPFDFDPNPE 250 260 270 280 290 150 160 170 180 190 FLJ000 RLIKGSADRNSPSPSSVASSDSGSTDEIQDEFEREADVEPMVS KIAA15 TESLGMASGMSDALRSSCAGQVGPCRSGTPDPRDGEQPCCSRDLPASAGHPRAGGGAQPS 300 310 320 330 340 350 >>KIAA0204 ( 1164 res) ha02801 (1164 aa) initn: 49 init1: 49 opt: 85 Z-score: 89.6 bits: 25.9 E(): 8.6 Smith-Waterman score: 85; 23.864% identity (63.636% similar) in 88 aa overlap (33-116:869-952) 10 20 30 40 50 60 FLJ000 RKVASDDDISEQDGEVNRFSDDEVGSMNITDEMKRMFNQ--LRETFDFDDDCDSLTWEEN ... : :.: . . ..:.. ..: ... KIAA02 RRQELRELRFLQKEEQRAQQQLNSKLQQQREQIFRRFEQEMMSKKRQYDQEIENLEKQQK 840 850 860 870 880 890 70 80 90 100 110 FLJ000 EDTLLLWEDFTNC--NPTIDLQGEQEENLGNLIHETESFFKTRDKEYQETIGQIELELAT . : .. :: . . ..::::..:... ....:.: :: :: . . . :: KIAA02 QTIERLEQEHTNRLRDEAKRIKGEQEKELSKF----QNMLKNRKKEEQEFVQKQQQELDG 900 910 920 930 940 950 120 130 140 150 160 170 FLJ000 AKSDMNRHLHEYMEMCSMKRGLDVQMETCRRLIKGSADRNSPSPSSVASSDSGSTDEIQD KIAA02 SLKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQYFM 960 970 980 990 1000 1010 >>KIAA1986 ( 334 res) pg00636 (334 aa) initn: 214 init1: 77 opt: 78 Z-score: 89.5 bits: 24.1 E(): 8.7 Smith-Waterman score: 78; 34.211% identity (68.421% similar) in 38 aa overlap (151-188:96-133) 130 140 150 160 170 180 FLJ000 SDMNRHLHEYMEMCSMKRGLDVQMETCRRLIKGSADRNSPSPSSVASSDSGSTDEIQDEF ....: .:::.: ..::: . .: ..: KIAA19 EEKEQPPQLSASMPETTATEPQPDDEPAAGVQNGAPSPAPSPDSDSDSDSDGEEEEEEEG 70 80 90 100 110 120 190 FLJ000 EREADVEPMVS ::. : KIAA19 ERDETPCPALVPPTDSLGPGDRSPPGSPSTPTEQRISVSSPGRGHKVFVVTRVESPPERA 130 140 150 160 170 180 >>KIAA1629 ( 1329 res) fh20517 (1329 aa) initn: 85 init1: 60 opt: 84 Z-score: 87.8 bits: 25.8 E(): 11 Smith-Waterman score: 84; 22.652% identity (53.039% similar) in 181 aa overlap (6-176:124-295) 10 20 30 FLJ000 KERKVASDDDISEQDGEVNRFSDDEVGSMNITDEM ::. : .:: . .: .. ... : KIAA16 KNVRNIDSSEGGEKDGHNPTGNGLHNGFLTASSLDSYSKDGAKSLKGDVPASEVTLKDST 100 110 120 130 140 150 40 50 60 70 80 90 FLJ000 KRMFNQLRETFDFDDDCDSLTWEENEDTLLLWEDFTNCNPTIDLQGEQEENLGNLIHETE .:. . . .:::: ... .. : . .: . : . .. ..: : :. KIAA16 FSQFSPISSAEEFDDD-EKIEVDDPPDKEDMRSSFRSNVLTGSAPQQDYDKLKALGGENS 160 170 180 190 200 210 100 110 120 130 140 FLJ000 SFFKTRDKEYQETIGQIELELA----TAKSDMNRHLHEYMEMCS----MKRGLDVQMETC : : : :..: . : : :..: ..: ... . .:.. : .:. KIAA16 S------KTGLSTSGNVEKNKAVKRETEASSINLSVYEPFKVRKAEDKLKESSDKVLEN- 220 230 240 250 260 150 160 170 180 190 FLJ000 RRLIKG--SADRNSPSPSSVASSDSGSTDEIQDEFEREADVEPMVS :.. : :...:. : ::: : . :.... KIAA16 -RVLDGKLSSEKNDTSLPSVAPSKTKSSSKLSSCIAAIAALSAKKAASDSCKEPVANSRE 270 280 290 300 310 320 KIAA16 SSPLPKEVNDSPRAADKSPESQNLIDGTKKPSLKQPDSPRSISSENSSKGSPSSPAGSTP 330 340 350 360 370 380 >>KIAA1903 ( 1014 res) hk10325 (1014 aa) initn: 56 init1: 56 opt: 82 Z-score: 87.3 bits: 25.3 E(): 11 Smith-Waterman score: 82; 22.835% identity (51.181% similar) in 127 aa overlap (12-131:370-489) 10 20 30 40 FLJ000 KERKVASDDDISEQDGEVNRFSDDEVGSMNITDEMKRMFNQ ..: ...: : ::. . .. . KIAA19 KFMFGFPENWKEHIDNFLEQLRAGEKNREKTKQKQKTGRSVRDIRKSMKNDAQENQTDTA 340 350 360 370 380 390 50 60 70 80 90 FLJ000 LRETFDFDDDCDSLTWEENEDT-----LLLWEDFTNCN--PTIDLQGEQEENLGNLIHET : : .: :::.: . :. . : .::. ::. . .: ..: :.. KIAA19 QRATTTYDFDCDNLELKSNKHSESPGATELNMCHSNCQNKPTLRFPDDQ---VNNTIQNG 400 410 420 430 440 450 100 110 120 130 140 150 FLJ000 ESFFKTRDKEYQETIGQIELELATAKSDMNRHLHEYMEMCSMKRGLDVQMETCRRLIKGS . : :: ::. : .... : .... .: . KIAA19 GG----DDLSNQELIGKKEYKMSSKKLKIGERTNERIIKSQKQETTEELDVSIDILTSRE 460 470 480 490 500 510 160 170 180 190 FLJ000 ADRNSPSPSSVASSDSGSTDEIQDEFEREADVEPMVS KIAA19 QFFSDEERKYMAINQKKAYILVTPLKSRKVIEQRCMRYNLSAGTIKAVTDFVIPECQKKS 520 530 540 550 560 570 >>KIAA1261 ( 787 res) hh15855b (787 aa) initn: 119 init1: 60 opt: 80 Z-score: 86.7 bits: 24.8 E(): 12 Smith-Waterman score: 80; 29.231% identity (61.538% similar) in 65 aa overlap (91-152:42-103) 70 80 90 100 110 FLJ000 EDTLLLWEDFTNCNPTIDLQGEQEENLGNLIHETESFFKTRDKEYQETIGQIELE---LA : :. . .: . . : ...:: :: KIAA12 SAWMIRDLSKMYPQTRHPAPHQPAQPFKFTISESCDRIKEEFQFLQAQYHSLKLECEKLA 20 30 40 50 60 70 120 130 140 150 160 170 FLJ000 TAKSDMNRHLHEYMEMCSMKRGLDVQMETCRRLIKGSADRNSPSPSSVASSDSGSTDEIQ . :..:.:: :.:: . ::...:. ...: KIAA12 SEKTEMQRHYVMYYEM---SYGLNIEMHKQAEIVKRLNAICAQVIPFLSQEHQQQVVQAV 80 90 100 110 120 180 190 FLJ000 DEFEREADVEPMVS KIAA12 ERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPLTPHPSGLQPPAIPPIGSSAGLLALSS 130 140 150 160 170 180 191 residues in 1 query sequences 2210803 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:44 2009 done: Fri Feb 27 10:32:45 2009 Total Scan time: 0.360 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]