# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00076.fasta.huge -Q ../query/FLJ00076.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00076, 298 aa vs ./tmplib.10216 library 2210696 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.4176+/-0.00379; mu= 22.1045+/- 0.258 mean_var=79.7080+/-17.273, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.143656 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1504 ( 447 res) hk04058 ( 447) 96 28.8 0.68 KIAA1427 ( 439 res) fh02770 ( 439) 92 28.0 1.2 KIAA1869 ( 935 res) hh01800 ( 935) 89 27.9 2.7 KIAA1978 ( 384 res) fj03313 ( 384) 85 26.5 3.1 KIAA0225 ( 2013 res) ha02515 (2013) 90 28.7 3.4 KIAA2029 ( 1021 res) pj01256 (1021) 86 27.4 4.3 FLJ00043 ( 1415 res) as00043 (1415) 83 27.0 7.7 KIAA1223 ( 1089 res) pg00513 (1089) 79 26.0 12 KIAA0014 ( 513 res) ha00442 ( 513) 76 24.8 13 FLJ00146 ( 522 res) sh05065 ( 522) 76 24.8 13 KIAA1561 ( 1416 res) fh20178s1 (1416) 78 26.0 16 KIAA0590 ( 1468 res) hj02755 (1468) 78 26.0 16 KIAA1924 ( 613 res) hh01339 ( 613) 75 24.7 16 KIAA0362 ( 1108 res) hh00083 (1108) 77 25.6 16 KIAA1146 ( 271 res) hg00368 ( 271) 72 23.5 17 KIAA1557 ( 806 res) fh18848 ( 806) 75 24.9 18 KIAA0502 ( 144 res) hh00007 ( 144) 69 22.4 19 FLJ00133 ( 1282 res) sh02303 (1282) 76 25.5 20 KIAA1465 ( 785 res) fh13187 ( 785) 74 24.7 21 FLJ00164 ( 822 res) sh07138 ( 822) 74 24.7 22 KIAA0079 ( 1102 res) ha03543 (1102) 75 25.2 22 KIAA1355 ( 1189 res) fj01564 (1189) 75 25.2 22 FLJ00202 ( 233 res) sj04223 ( 233) 69 22.8 24 KIAA1667 ( 505 res) fg05049 ( 505) 71 23.8 26 KIAA1031 ( 940 res) fh00470 ( 940) 73 24.6 26 FLJ00357 ( 628 res) sh02980 ( 628) 71 23.9 29 KIAA0047 ( 268 res) ha01551 ( 268) 68 22.7 29 FLJ00050 ( 270 res) as00050 ( 270) 68 22.7 29 KIAA1788 ( 413 res) fh22801 ( 413) 69 23.2 31 FLJ00232 ( 318 res) sj06640 ( 318) 68 22.8 32 KIAA0959 ( 820 res) hj05718 ( 820) 71 24.1 33 KIAA1775 ( 858 res) hk03826 ( 858) 71 24.1 34 KIAA1183 ( 345 res) hg01641a ( 345) 67 22.6 38 KIAA0856 ( 2237 res) bf00171 (2237) 73 25.3 40 KIAA0782 ( 1281 res) hk05405s1 (1281) 71 24.4 41 KIAA2014 ( 1032 res) ff00951s1 (1032) 70 24.1 42 KIAA0139 ( 1388 res) ha04032 (1388) 71 24.5 42 FLJ00185 ( 824 res) sj01856 ( 824) 69 23.7 44 KIAA0789 ( 620 res) pj01253 ( 620) 68 23.3 44 FLJ00362 ( 638 res) sh04538 ( 638) 68 23.3 45 KIAA0586 ( 1576 res) hj01033 (1576) 71 24.6 45 KIAA0222 ( 1204 res) ha02586 (1204) 70 24.2 46 FLJ00261 ( 1651 res) sh06537 (1651) 71 24.6 46 KIAA1605 ( 922 res) fj10791 ( 922) 69 23.8 46 KIAA2032 ( 952 res) eh00720 ( 952) 69 23.8 47 KIAA1367 ( 579 res) fj03001 ( 579) 67 23.0 49 FLJ00296 ( 187 res) sh03944 ( 187) 63 21.4 50 KIAA0698 ( 1104 res) hg00360s1 (1104) 69 23.9 51 KIAA0149 ( 830 res) ha01221 ( 830) 68 23.5 51 KIAA1905 ( 626 res) ag00008 ( 626) 67 23.1 51 >>KIAA1504 ( 447 res) hk04058 (447 aa) initn: 107 init1: 53 opt: 96 Z-score: 109.4 bits: 28.8 E(): 0.68 Smith-Waterman score: 96; 29.000% identity (52.000% similar) in 100 aa overlap (154-244:247-343) 130 140 150 160 170 180 FLJ000 ATWAVPTVRSGWIQGLRSLAQHPSALRFLADHGAVDTIFSL-QGDSSLFVASAASQLLVH : :. . :.: . :: : :. . : KIAA15 IEETPQKSETSKSIVYKSPHTTIYNVKEAKDPGSDISAFKLPEHKSSTFNRVNAN--MSH 220 230 240 250 260 270 190 200 210 220 230 FLJ000 VLALS----MRGGAEGQPCLPGGDWPACAQKIMDHVEESLCSAATPKVTQAL----NVLT :.:. . ::.. .:: : . :: : . : :. : .: ... ..:: KIAA15 PLVLGKHPLLSGGTKRNPCSPQAFPPAKKQPFTIHEEKPTSSDCSPVRSSSWRRLPSILT 280 290 300 310 320 330 240 250 260 270 280 290 FLJ000 TTFGRCQSPWTEALWVRLSPRVACLLERDPIPAAHSFVDLLLCVARSGPRDAAGGPGWAT .: . : :: KIAA15 STVN-LQEPWKSGKMTPPLCKCGRRSKRLVVSNNGPNHGKVFYCCPIGKYQENRKCCGYF 340 350 360 370 380 390 >>KIAA1427 ( 439 res) fh02770 (439 aa) initn: 62 init1: 62 opt: 92 Z-score: 105.0 bits: 28.0 E(): 1.2 Smith-Waterman score: 92; 28.037% identity (51.402% similar) in 107 aa overlap (53-152:220-318) 30 40 50 60 70 80 FLJ000 ALCAVLVDPRQPVADDTCLEKLLDWFKTVTEGESSVVLLQEHPCLVELLSHVLKVQDLSS :..... : : : : : ..: . KIAA14 VTRLEAVTSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPT 190 200 210 220 230 240 90 100 110 120 130 FLJ000 GVLSFSLRLAGTFAAQENCFQYLQQGELLPGLFGEPGPLGRATWAV-------PTVRSGW ..:...:: :. .. ::: :: : ::: : :. :.. .: KIAA14 ATLTLTLRTCDRFS------RHSVAGELRLGLDGTSVPLGAAQWGELKTSAKEPSAGAGE 250 260 270 280 290 300 140 150 160 170 180 190 FLJ000 IQGLRSLAQHPSALRFLADHGAVDTIFSLQGDSSLFVASAASQLLVHVLALSMRGGAEGQ . : :.. :.: :.: KIAA14 V--LLSISYLPAANRLLVVLIKAKNLHSNQSKELLGKDVSVKVTLKHQARKLKKKQTKRA 310 320 330 340 350 360 >>KIAA1869 ( 935 res) hh01800 (935 aa) initn: 118 init1: 68 opt: 89 Z-score: 98.7 bits: 27.9 E(): 2.7 Smith-Waterman score: 89; 27.027% identity (52.252% similar) in 111 aa overlap (195-298:783-892) 170 180 190 200 210 220 FLJ000 QGDSSLFVASAASQLLVHVLALSMRGGAEGQPCLPGGDWPA--CAQKIMDHVEESLCSAA :: :.. :: .. . . .: .. KIAA18 VLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPAPLTSRALPPEPAPALLGGP 760 770 780 790 800 810 230 240 250 260 270 FLJ000 TPK---VTQALNVLTTTFGRCQS-PWTEALWVRLSPRVACLL-ERDPIPAAHSFVDLLLC .:. .. : . . ::: : : :: . .::.. .: :. . .. :: KIAA18 SPRPHECASPLRLDVPPEGRCASAPARPALSAP-APRLGVGGGRRLPFSGHRAPPALLTR 820 830 840 850 860 870 280 290 FLJ000 VARSGPRDAAGGPGWATVFLG : .:: .:::: ..:: KIAA18 VPSGGPSRYSGGPGKHLLYLGRPEGYRGRALKRVDVEKPQLSLKPPLVGPSSRQAVPNGG 880 890 900 910 920 930 >>KIAA1978 ( 384 res) fj03313 (384 aa) initn: 113 init1: 50 opt: 85 Z-score: 97.7 bits: 26.5 E(): 3.1 Smith-Waterman score: 108; 24.260% identity (47.337% similar) in 169 aa overlap (115-266:217-369) 90 100 110 120 130 140 FLJ000 LSFSLRLAGTFAAQENCFQYLQQGELLPGLFGEPGPLGRATWA-VPTVRSGWIQGLRSLA : ::: ::. : . .... .. ..: KIAA19 VLEYETAEMAEEAQQQADGLSLGGSHLRVSFCAPGPPGRSMLAALIAAQATALNRGKGLL 190 200 210 220 230 240 150 160 170 180 190 FLJ000 QHPSALRFLADHGAVDTIFSLQGDSSLFVASAASQLLVHVLALSMRGGAEG----QPCLP .:. :..: . : ::. :::.. : . :: .: : .: KIAA19 PEPNILQLLNNLGP----------------SASLQLLLNPLLHGSAGGKQGLLGAPPAMP 250 260 270 280 290 200 210 220 230 240 FLJ000 GGDWPACAQKIMDHVEESLCSAAT-----PKVTQALNVLTTTFGRCQS-------PWTEA . :: . ... . .. . .: : . : :..: .: : . :: . KIAA19 LLNGPALSTALLQLALQTQGQKVTHASPSPTALQPLQALFNTAGAIGGVGGPLAVPWGRR 300 310 320 330 340 350 250 260 270 280 290 FLJ000 LWVRLSPRVACLLERDPIPAAHSFVDLLLCVARSGPRDAAGGPGWATVFLG :: .: :: . : : KIAA19 TRVRATPPNPCLSHPHPHPPLAIAHDGSPSFPPF 360 370 380 >>KIAA0225 ( 2013 res) ha02515 (2013 aa) initn: 80 init1: 80 opt: 90 Z-score: 96.9 bits: 28.7 E(): 3.4 Smith-Waterman score: 90; 29.545% identity (56.818% similar) in 88 aa overlap (22-105:1015-1099) 10 20 30 40 50 FLJ000 AEDATERACGLTMDPECAQLLPALCAVLVDPRQPVADDTCLEKLLDWFKTV :. . : :: :::. .:. .. KIAA02 RIHILNLLITSLECNPPNLALYLLGFELKKPVSTTNLQDPGVLGCPRTCLHAILNILEKG 990 1000 1010 1020 1030 1040 60 70 80 90 100 FLJ000 TEGESSVVLLQEHPCLVELLSHVL----KVQDLSSGVLSFSLRLAGTFAAQENCFQYLQQ :::... : ..: : :.:: .:. .: :. .. . :: . : .. .::: KIAA02 TEGRTGPVAVRESPQLAELCYQVIYQLCACSDTSGPTMRY-LRTSQDFLFSQ--LQYLPF 1050 1060 1070 1080 1090 1100 110 120 130 140 150 160 FLJ000 GELLPGLFGEPGPLGRATWAVPTVRSGWIQGLRSLAQHPSALRFLADHGAVDTIFSLQGD KIAA02 SNKEYEISMLNQMSWLMKTASIELRVTSLNRQRSHTQRLLHLLLDDMPVKPYSDGEGGIE 1110 1120 1130 1140 1150 1160 >>KIAA2029 ( 1021 res) pj01256 (1021 aa) initn: 68 init1: 62 opt: 86 Z-score: 95.0 bits: 27.4 E(): 4.3 Smith-Waterman score: 86; 25.000% identity (47.115% similar) in 104 aa overlap (190-284:742-834) 160 170 180 190 200 210 FLJ000 TIFSLQGDSSLFVASAASQLLVHVLALSMRGGAEGQPCLPGGDWPACAQKIM---DHVEE :::...: :.... . : KIAA20 PVTGLVPCKVSACPPSWSVGNWSACSRTCGGGAQSRPV-------QCTRRVHYDSEPVPA 720 730 740 750 760 220 230 240 250 260 270 FLJ000 SLCSAATPKVTQALNVLTTTFGRCQSPWTEAL------WVRLSPRVACLLERDPIPAAHS ::: .:. :: : . . .::.: : . . ::: .: :. KIAA20 SLCPQPAPSSRQACNSQSCPPAWSAGPWAECSHTCGKGWRKRA--VACK-STNPSARAQL 770 780 790 800 810 820 280 290 FLJ000 FVDLLLCVARSGPRDAAGGPGWATVFLG . : . :... :: KIAA20 LPDAV-CTSEPKPRMHEACLLQRCHKPKKLQWLVSAWSQCSVTCERGTQKRFLKCAEKYV 830 840 850 860 870 880 >>FLJ00043 ( 1415 res) as00043 (1415 aa) initn: 114 init1: 78 opt: 83 Z-score: 90.4 bits: 27.0 E(): 7.7 Smith-Waterman score: 83; 34.545% identity (63.636% similar) in 55 aa overlap (72-122:821-875) 50 60 70 80 90 100 FLJ000 EKLLDWFKTVTEGESSVVLLQEHPCLVELLSHVLKVQDLSSGVLSFSLRLAGTFAAQENC ..::.::. .:: ..: .:...::: FLJ000 YEALRAPVTQPRVLGSQEAKAEISGVQGSETQVLRVQEAEAGVWGMSEGKSGAWGAQEAE 800 810 820 830 840 850 110 120 130 140 150 FLJ000 FQYLQQGELLPGLF----GEPGPLGRATWAVPTVRSGWIQGLRSLAQHPSALRFLADHGA .. :.. : : : .: : :: FLJ000 MKVLESPENKSGTFKAQEAEAGVLGNEKGKEAEGSLTEASLPEAQVASGAGAGAPRASSP 860 870 880 890 900 910 >>KIAA1223 ( 1089 res) pg00513 (1089 aa) initn: 74 init1: 48 opt: 79 Z-score: 87.0 bits: 26.0 E(): 12 Smith-Waterman score: 79; 29.730% identity (52.703% similar) in 74 aa overlap (145-215:349-422) 120 130 140 150 160 170 FLJ000 FGEPGPLGRATWAVPTVRSGWIQGLRSLAQHPSALRFLADHGAVDTIFSLQGDSSLFVAS : .. : :::: . ...: ..: ::. KIAA12 IVLNLLQHGAEVNKADNEGRTALIAAAYMGHREIVEHLLDHGAEVNHEDVDGRTALSVAA 320 330 340 350 360 370 180 190 200 210 220 230 FLJ000 ---AASQLLVHVLALSMRGGAEGQPCLPGGDWPACAQKIMDHVEESLCSAATPKVTQALN ::. . :..: . ::: . : : : . ::. KIAA12 LCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYEGHVDVVDLLLEGGADVDHTD 380 390 400 410 420 430 240 250 260 270 280 290 FLJ000 VLTTTFGRCQSPWTEALWVRLSPRVACLLERDPIPAAHSFVDLLLCVARSGPRDAAGGPG KIAA12 NNGRTPLLAAASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIASAQGNVEVVRTLLDRGL 440 450 460 470 480 490 >>KIAA0014 ( 513 res) ha00442 (513 aa) initn: 62 init1: 39 opt: 76 Z-score: 86.5 bits: 24.8 E(): 13 Smith-Waterman score: 84; 25.455% identity (50.000% similar) in 110 aa overlap (147-253:413-507) 120 130 140 150 160 170 FLJ000 EPGPLGRATWAVPTVRSGWIQGLRSLAQHPSALRFLADHGAVDTIFSLQGDSSLF---VA ..::.:. .: . .:. : . :. :: KIAA00 SAATLLHLELTECQLADTQLLATLPILTQCASLRYLGLYG---NPLSMAGLKELLRDSVA 390 400 410 420 430 180 190 200 210 220 230 FLJ000 SAASQLLVHVLALSMRGGAEGQPCLPGGDWPACAQKIMDHVEESLCSAATPKVTQALNVL .: . .:: . .. : : :: :. .. : :. .: :. : KIAA00 QAELRTVVHPFPVD---------CYEGLPWPPPASVLL---EASINEEKFARVEAELHQL 440 450 460 470 480 240 250 260 270 280 290 FLJ000 TTTFGRCQSPWTEALWVRLSPRVACLLERDPIPAAHSFVDLLLCVARSGPRDAAGGPGWA . :: . :: .. ::. KIAA00 LLASGRAHVLWTTDIYGRLAADYFSL 490 500 510 >>FLJ00146 ( 522 res) sh05065 (522 aa) initn: 76 init1: 76 opt: 76 Z-score: 86.4 bits: 24.8 E(): 13 Smith-Waterman score: 78; 25.735% identity (49.265% similar) in 136 aa overlap (126-261:195-304) 100 110 120 130 140 150 FLJ000 AAQENCFQYLQQGELLPGLFGEPGPLGRATWAVPTVRSGWIQGLRSLAQHPSALRFLADH ::. .: . ..:.: .:: ::: :. FLJ001 RPAVLLARTRPRPVEGFEVTNVTASTISVQWALHRIRHATVSGVRVSIRHPEALR---DQ 170 180 190 200 210 220 160 170 180 190 200 210 FLJ000 GAVDTIFSLQGDSSLFVASAASQLLVHVLALSMRGGAEGQPCLPGGDWPACAQKIMDHVE :.:. :. : : : .. ... :. .: .:. .: FLJ001 -ATDVDRSV--DRFTFRALLPGK--RYTIQLTTLSGLRGE----------------EHPT 230 240 250 260 220 230 240 250 260 270 FLJ000 ESLCSAATPKVTQALNVLTTTFGRCQSPWTEALWVRLSPRVACLLERDPIPAAHSFVDLL ::: .: : :. : . : .: . ....: .: . ::: FLJ001 ESLATAPTHVWTRPLPPANLTAARVTATSAHVVWD--APTPGSLLEAYVINVTTSQSTKS 270 280 290 300 310 280 290 FLJ000 LCVARSGPRDAAGGPGWATVFLG FLJ001 RYVPNGKLASYTVRDLLPGRRYQLSVIAVQSTELGPQHSEPAHLYIITSPRDGADRRWHQ 320 330 340 350 360 370 298 residues in 1 query sequences 2210696 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:46 2009 done: Fri Feb 27 10:32:46 2009 Total Scan time: 0.450 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]