# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00077.fasta.huge -Q ../query/FLJ00077.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00077, 278 aa vs ./tmplib.10216 library 2210716 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.0244+/-0.0053; mu= 14.7709+/- 0.358 mean_var=162.5881+/-35.484, 0's: 0 Z-trim: 2 B-trim: 0 in 0/40 Lambda= 0.100584 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00267 ( 1110 res) sj04085 (1110) 132 31.0 0.36 KIAA1398 ( 1586 res) ha02572 (1586) 132 31.2 0.43 KIAA1211 ( 803 res) fh00041 ( 803) 121 29.1 0.93 FLJ00198 ( 677 res) sj03504 ( 677) 118 28.6 1.2 KIAA1183 ( 345 res) hg01641a ( 345) 111 27.1 1.7 KIAA1092 ( 1154 res) hk04417 (1154) 117 28.8 1.7 KIAA1470 ( 564 res) fj01953 ( 564) 110 27.3 2.3 KIAA0227 ( 336 res) ha02748 ( 336) 104 26.1 3.3 FLJ00268 ( 695 res) sj05723 ( 695) 103 26.4 5.3 KIAA0736 ( 748 res) hk03846 ( 748) 103 26.5 5.5 FLJ00227 ( 196 res) sj06355 ( 196) 94 24.2 6.9 KIAA0375 ( 1540 res) hh00360s1 (1540) 103 27.0 7.9 KIAA0660 ( 490 res) hk01902 ( 490) 97 25.3 8.1 KIAA1185 ( 403 res) hg02311a ( 403) 95 24.9 8.9 KIAA0202 ( 508 res) ha02944 ( 508) 96 25.2 9.1 KIAA0492 ( 167 res) hh01162 ( 167) 90 23.5 9.5 KIAA1623 ( 1236 res) fj04650 (1236) 100 26.4 9.5 KIAA1064 ( 1315 res) hj05008s1 (1315) 100 26.4 9.8 KIAA0913 ( 1881 res) fh07519s2 (1881) 101 26.8 11 KIAA1912 ( 589 res) fj18220 ( 589) 95 25.1 11 FLJ00043 ( 1415 res) as00043 (1415) 99 26.4 11 KIAA1893 ( 800 res) fk04261 ( 800) 93 25.1 15 KIAA1887 ( 967 res) fk02232 ( 967) 93 25.2 17 FLJ00084 ( 641 res) as00084 ( 641) 90 24.5 19 FLJ00169 ( 432 res) sh07709 ( 432) 88 23.9 19 KIAA0160 ( 803 res) ha03912s1 ( 803) 91 24.8 19 KIAA1870 ( 832 res) hh05136b ( 832) 91 24.8 19 KIAA1579 ( 704 res) fj04678 ( 704) 90 24.5 20 KIAA0732 ( 1449 res) fg05988b (1449) 93 25.5 21 KIAA0735 ( 707 res) hj00943 ( 707) 89 24.4 22 KIAA1963 ( 488 res) ph00179 ( 488) 87 23.9 22 KIAA0807 ( 1329 res) hk04449(revised) (1329) 92 25.3 22 KIAA1113 ( 1131 res) hj06379(revised) (1131) 91 25.0 23 KIAA0476 ( 1626 res) ah04654 (1626) 92 25.4 24 FLJ00229 ( 627 res) sj06546 ( 627) 87 24.0 25 KIAA0490 ( 135 res) hh00727 ( 135) 79 21.8 26 KIAA1773 ( 3434 res) hj00752s2 (3434) 95 26.4 26 KIAA0347 ( 1281 res) hg01528(revised) (1281) 90 25.0 26 KIAA1926 ( 412 res) hh10052 ( 412) 84 23.3 27 FLJ00093 ( 977 res) as00093 ( 977) 88 24.5 28 KIAA0612 ( 1810 res) hg00654s1 (1810) 91 25.4 28 FLJ00020 ( 1142 res) as00020 (1142) 88 24.6 30 KIAA1618 ( 1415 res) fj14314 (1415) 89 24.9 31 KIAA1135 ( 789 res) hj05037 ( 789) 86 24.0 31 KIAA0176 ( 265 res) ha03941 ( 265) 80 22.4 33 KIAA2011 ( 1091 res) pj02017 (1091) 87 24.4 33 KIAA0719 ( 624 res) hk01141 ( 624) 84 23.6 34 KIAA0510 ( 95 res) hh00345 ( 95) 74 20.8 35 KIAA0201 ( 949 res) ha03256 ( 949) 85 24.0 37 KIAA0721 ( 433 res) hk01908 ( 433) 81 22.9 38 >>FLJ00267 ( 1110 res) sj04085 (1110 aa) initn: 57 init1: 57 opt: 132 Z-score: 114.3 bits: 31.0 E(): 0.36 Smith-Waterman score: 132; 30.282% identity (54.225% similar) in 142 aa overlap (7-144:637-774) 10 20 30 FLJ000 RGGSEGRGRGR-EKRARGARRKRKQGGGEARAADGE .: : : .: : :. ::: .: : FLJ002 PEVEEENGEEVFLSAYDDLSPLLGPKPPIWKGSGSLEGEAAGCGRQALGQGGEEQAC-WE 610 620 630 640 650 660 40 50 60 70 80 90 FLJ000 GGSGPGAEAGARTRPREEAEGGGSVEEGARGIIKGDEGSVGAGKEAQGR-KYG-KEEWRV : :: :.: ::::::. .. : : . :.: .:...:.. : . : .:: .. FLJ002 VGEDKQAEPGGRLDIREEAEGSPETKVEA-GKASEDRGEAGGSQETKVRLREGSREETEA 670 680 690 700 710 720 100 110 120 130 140 150 FLJ000 RARRREGARPG-RVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESAACPAAGPALWRL . .. .: . . ....: . . : :::.:. :: : : FLJ002 KEEKSKGQKKADSMEAKGVEEPGGDEYTDEKEKEIEREEDEQ--REEAQVEAGRDLEQGA 730 740 750 760 770 780 160 170 180 190 200 210 FLJ000 PEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNSGFTRLGTNLMTSV FLJ002 QEDQVAEEKWEVVQKQEAEGVREDEDKGQREKGYHEARKDQGDGEDSRSPEAATEGGAGE 790 800 810 820 830 840 >>KIAA1398 ( 1586 res) ha02572 (1586 aa) initn: 174 init1: 73 opt: 132 Z-score: 112.9 bits: 31.2 E(): 0.43 Smith-Waterman score: 146; 26.316% identity (63.816% similar) in 152 aa overlap (3-146:365-515) 10 20 30 FLJ000 RGGSEGRG-RGREKRARGARRKRKQG-GGEAR :....: ... :.:.::. . :.. :.. . KIAA13 GKKAEGAQNQGKKGEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQ 340 350 360 370 380 390 40 50 60 70 80 FLJ000 AADGEGGSGPGAEA-GARTRPR--EEAEGGGSVEEGARGIIKGDEGSVGAGKEAQG-RKY . .::... : .: ::... . : :.. :. :::.. : ::. . ::.:.: .. KIAA13 GKKAEGAQNQGKKAEGAQNQGKKVEGAQNQGKKAEGAQNQGKKAEGAQNQGKKAEGAQNQ 400 410 420 430 440 450 90 100 110 120 130 140 FLJ000 GK--EEWRVRARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESAACPA :: : . .... :::. ...:.: . . :: . : .. .... . : KIAA13 GKKAEGAQNQGKKAEGAQNQDKKAEGAQNQGR-KAEGAQNQGRKAEGAQNQGKKAEGAPN 460 470 480 490 500 510 150 160 170 180 190 200 FLJ000 AGPALWRLPEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNSGFTRL : KIAA13 QGKKAEGAPNQGKKAEGTPNQGKKAEGTPNQGKKAEGTPNQGKKAEGAQNQGKKAEGAQN 520 530 540 550 560 570 >>KIAA1211 ( 803 res) fh00041 (803 aa) initn: 133 init1: 92 opt: 121 Z-score: 107.0 bits: 29.1 E(): 0.93 Smith-Waterman score: 135; 28.387% identity (48.387% similar) in 155 aa overlap (7-156:14-159) 10 20 30 40 FLJ000 RGGSEGRGRGREKRAR-----GARRKRKQGGGEARAADGEGGSGPGAEAGART : ::: .: : :. :.:. : . : :: . : : : : KIAA12 RLRDGKSWNSRRRRCRGRPRRWRRLGRAGGARRRRIWGKRRRRAD-RPGPEEKREEGD-T 10 20 30 40 50 50 60 70 80 90 100 FLJ000 RPREEAEGGGSVEEGARGIIKGDEGSVGAGKEAQGRKYGKEEWRVRARRREGARPGRVQG .: . :: :.:. .. : :. :::: . .:. .:. :: : KIAA12 EPLLKQEGP---VEAAQPPVERKE----AAALEQGRKVEELRWQEVDERQTMPRPYTFQV 60 70 80 90 100 110 110 120 130 140 150 160 FLJ000 QGGQVWAYIPGTGAAMAAAAREEEEEAARESAACPAAGPALWRLPEVLLLHMCSYLDMRA ..: .: .. . .. :.. :: . : :.:. :: : KIAA12 SSGGKQILFPKVNLSPVTPAKDTGLTAAPQEPKAPKASPVQHALPSSLSVPHTAILVTGA 120 130 140 150 160 170 170 180 190 200 210 220 FLJ000 LGRLAQVYRWLWHFTNCDLLRRQIAWASLNSGFTRLGTNLMTSVPVKVSQNWIVGCCREG KIAA12 QLCGPAVNLSQIKDTACKSLLGLEEKKHAEAPAGENPPRGPGDARAGSGKAKPPQESPSS 180 190 200 210 220 230 >>FLJ00198 ( 677 res) sj03504 (677 aa) initn: 66 init1: 66 opt: 118 Z-score: 105.3 bits: 28.6 E(): 1.2 Smith-Waterman score: 128; 34.328% identity (50.000% similar) in 134 aa overlap (2-127:541-660) 10 20 30 FLJ000 RGGSEGRGRGREKRARGARRKRKQGGGEARA ::. :. : :: . :.: . FLJ001 RHLAIANPHFWAECDAGGREGSFAGAAAAPGGAAGEPAGPCP---GAAAAEPAGAGAQQP 520 530 540 550 560 40 50 60 70 80 FLJ000 ADGE----GGSGPGA--EAGARTRPREEAEGGGSVEEGARGIIKGD-EGSVGAGKEAQGR :. : ::::: :::. : :::. :. .. :: ....: .. :: FLJ001 PAGREVCAGDSGPGAAPEAGG-------AGGGGA---GGTAVPGGDPRAAAGPASGPQGP 570 580 590 600 610 90 100 110 120 130 140 FLJ000 KYGKEEWRVRARRREGARPGRVQGQGGQVWAYIPGT-GAAMAAAAREEEEEAARESAACP . ::: :: : : ::: . . : ::. : : ::: FLJ001 GTAAAAAGGRARGTAGAAP-RPQGQHAGTGAGPPGAAGPARAAAGPAGQRGGTGGGPAGR 620 630 640 650 660 670 150 160 170 180 190 200 FLJ000 AAGPALWRLPEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNSGFTR FLJ001 A >>KIAA1183 ( 345 res) hg01641a (345 aa) initn: 127 init1: 60 opt: 111 Z-score: 102.4 bits: 27.1 E(): 1.7 Smith-Waterman score: 124; 33.333% identity (55.882% similar) in 102 aa overlap (9-105:240-338) 10 20 30 FLJ000 RGGSEGRGRGREKRARGARRKRKQGGGEARAADGE--- . : :::: : : .:. :. .. KIAA11 GSEEASDEQSEEESEDTESEASEPEDRASRKPRAKRARTAPRGLTPAGAPPTASGARKTR 210 220 230 240 250 260 40 50 60 70 80 90 FLJ000 -GGSGPGAEAGARTRPREEAEGGGSVEEGARGIIKGDEGSVGAGKEAQ-GRKYGKEEWRV :: : : : . :...: . ::... : : : .::.:.: .:. :. :. KIAA11 AGGRGRGR--GRGVTPEKKAGSRGSAQDDAAGSRK-KKGSAGSGAHARAGEAKGQAPTGS 270 280 290 300 310 320 100 110 120 130 140 150 FLJ000 RARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESAACPAAGPALWRLP .: : . :: :: KIAA11 KAARGKKARRGRRLPPKCR 330 340 >>KIAA1092 ( 1154 res) hk04417 (1154 aa) initn: 93 init1: 60 opt: 117 Z-score: 102.4 bits: 28.8 E(): 1.7 Smith-Waterman score: 117; 33.981% identity (53.398% similar) in 103 aa overlap (2-102:9-104) 10 20 30 40 50 FLJ000 RGGSEG-RGRGREKRARGARRKRKQGGGEARAADGEGGSGPGAEAGARTRPRE ::. : :::: . .::: . :: :: : ..:: ::. . KIAA10 PRAAARGGGGDAGTRGRGFVQAGRGAPMAECGRGG---AAGGALPTSPGPALGAKGALKA 10 20 30 40 50 60 70 80 90 100 110 FLJ000 EA-EGGGSVEEGARGIIKGDEGSVGAGKEAQGRKYGKEEWRVRARRREGARPGRVQGQGG . ::::. . ..: . : :.:. : . : . : : .:: .: : KIAA10 GVGEGGGGGGRLGHGRARYDSGGVSNGDCSLGVS-GDE---ARASPTRGPRGVALAPTPS 60 70 80 90 100 110 120 130 140 150 160 170 FLJ000 QVWAYIPGTGAAMAAAAREEEEEAARESAACPAAGPALWRLPEVLLLHMCSYLDMRALGR KIAA10 AVVCTLPRESKPGGLPRRSSIIKDGTKQKRERKKTVSFSSMPTEKKISSASDCINSMVEG 120 130 140 150 160 170 >>KIAA1470 ( 564 res) fj01953 (564 aa) initn: 98 init1: 72 opt: 110 Z-score: 99.7 bits: 27.3 E(): 2.3 Smith-Waterman score: 110; 28.926% identity (52.066% similar) in 121 aa overlap (1-114:70-179) 10 20 30 FLJ000 RGGSEGRGRGREKRARGARRKRKQGGGEAR ::: :: :: : : . ..::: . KIAA14 AATMPRKKAAAAAWEEPSSGNGTARAGPRKRGGPAGR-----KRERPERCSSSSGGGSSG 40 50 60 70 80 90 40 50 60 70 80 FLJ000 AADG-EGGSGPGAEAGART-RPREEAEGGGSV-----EEGARGIIKGDEGSVGAGKEAQG :: : ..::. : :. :: ...::.. : .. .: ::: : : KIAA14 DEDGLELDGAPGG--GKRAARPATAGKAGGAAVVITEPEHTKERVKL-EGSKCKG---QL 100 110 120 130 140 90 100 110 120 130 140 FLJ000 RKYGKEEWRVRARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESAACP .: .: . .:.. . . .. : ..: KIAA14 LIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSLLIT 150 160 170 180 190 200 150 160 170 180 190 200 FLJ000 AAGPALWRLPEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNSGFTR KIAA14 TEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAF 210 220 230 240 250 260 >>KIAA0227 ( 336 res) ha02748 (336 aa) initn: 192 init1: 73 opt: 104 Z-score: 97.1 bits: 26.1 E(): 3.3 Smith-Waterman score: 138; 32.031% identity (57.031% similar) in 128 aa overlap (31-146:9-134) 10 20 30 40 50 FLJ000 RGGSEGRGRGREKRARGARRKRKQGGGEARAADGEGGSGPG----AEAGAR---TRPREE :. : ...:: ::.:.: .: :: KIAA02 SGPRSPRSASPGPASTGPRHPQVAEGGGRERAARSREA 10 20 30 60 70 80 90 100 110 FLJ000 AEGGGS-VEEGARGIIKGDEGSVG-AGKEAQGRKYGKEEW-RVRARRREGARPGRVQGQG .:: .: . .: : .:. : : ::... . .:..: ..:.:: . ::: : : KIAA02 GEGPASEAAAAAAGAASGSSGENGSAGRQTAAGCHGRHEACEARGRRPRLLNPGRRGGGG 40 50 60 70 80 90 120 130 140 150 160 FLJ000 G--QVWAYIPGTGAAMAAAAREEEEEAARESAACPAAGPALWRLPEVLLLHMCSYLDMRA : :. : :.. :. .:. . . :::: KIAA02 GGGQIAARTRRRGGGRM--ERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARG 100 110 120 130 140 150 170 180 190 200 210 220 FLJ000 LGRLAQVYRWLWHFTNCDLLRRQIAWASLNSGFTRLGTNLMTSVPVKVSQNWIVGCCREG KIAA02 QVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSR 160 170 180 190 200 210 >>FLJ00268 ( 695 res) sj05723 (695 aa) initn: 81 init1: 55 opt: 103 Z-score: 93.4 bits: 26.4 E(): 5.3 Smith-Waterman score: 103; 30.973% identity (46.903% similar) in 113 aa overlap (1-105:586-692) 10 20 FLJ000 RGGSEGRGRGREK--RARGARRKRKQGGGE ::: .:.::: ::::: : : . FLJ002 AGLDYLCRIVRGQATGCWGAPQLLLLARLPRGGRTARARGRGPLLRARGAL-ARGLLGHR 560 570 580 590 600 610 30 40 50 60 70 80 FLJ000 ARAADGEGGSG----PGAEAGARTRPREEAEGGGSVEEGARGIIKGDEGSVGAGKEAQGR .: : :: : :.. ..: :: :: . :. . : : : : FLJ002 VRRWLGPGGRGGRVPPAGLWSGRRRP-----GGRRLWPWLRARVAGRGGVPGQRGVPVGL 620 630 640 650 660 90 100 110 120 130 140 FLJ000 --KYGKEEWRVRARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESAAC . : . .:.:: .. :. FLJ002 PLRSGGDAETARTRRTRACAAGKTNS 670 680 690 >>KIAA0736 ( 748 res) hk03846 (748 aa) initn: 119 init1: 62 opt: 103 Z-score: 93.1 bits: 26.5 E(): 5.5 Smith-Waterman score: 105; 27.376% identity (46.008% similar) in 263 aa overlap (4-241:68-307) 10 20 FLJ000 RGGSEG--RGRG-REKRARGARRKRKQGGGEA- :.: ::.: .... :: .: : KIAA07 KGLDRVQDEYSRRSYSRFEEEDDDDDFPAPSDGYYRGEGTQDEEEGGASSDATEGHDEDD 40 50 60 70 80 90 30 40 50 60 70 80 FLJ000 RAADGEGGSGPGAEAGARTRPREEAEGGGSVEEGARGIIKGDEGSVGAGKEAQGRKYGKE . .:: . : ::.:.. : . :. :.:: .. :: :. ::: :: .: KIAA07 EIYEGEYQGIPRAESGGKG----ERMADGAPLAGVRGGLSDGEGPPGGRGEAQRRKE-RE 100 110 120 130 140 150 90 100 110 120 130 140 FLJ000 EWRVRARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESAACPAAGPAL : :.. :. : :.: :. : :. : . :. . . :.: . KIAA07 EL---AQQYEAIL--RECGHGRFQWTLYFVLGLALMA----DGVEVFVVGFVLPSAEKDM 160 170 180 190 200 150 160 170 180 190 FLJ000 -WRLPEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASL--NS------- . .: . :: : .: .:: : ::: :: :: KIAA07 CLSDSNKGMLGLIVYLGM-------MVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSS 210 220 230 240 250 200 210 220 230 240 FLJ000 ---G-----FTRL--GTNLMTSVPVKVSQ-NWIVGCCREGILLKWRCSQMPWMQLEDDAL : : :: :... :.:. : . ... ..: :.: : : :: KIAA07 FVQGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLC--MFWMIGGVYAA 260 270 280 290 300 310 250 260 270 FLJ000 YISQANFILAYQFRPDGASLNRQPLGVCWA KIAA07 AMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTTQPESPRFFLENGKHD 320 330 340 350 360 370 278 residues in 1 query sequences 2210716 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:46 2009 done: Fri Feb 27 10:32:47 2009 Total Scan time: 0.430 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]