# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00096.fasta.huge -Q ../query/FLJ00096.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00096, 208 aa vs ./tmplib.10216 library 2210786 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 9.1966+/-0.00768; mu= -5.6098+/- 0.514 mean_var=358.9655+/-82.618, 0's: 0 Z-trim: 1 B-trim: 42 in 1/39 Lambda= 0.067694 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1883 ( 1480 res) fh02249 (1480) 178 30.4 0.52 KIAA0346 ( 1682 res) hg01508s1 (1682) 154 28.2 2.9 KIAA1713 ( 1652 res) fh22344 (1652) 151 27.9 3.5 KIAA0865 ( 1900 res) hk06640y1 (1900) 152 28.0 3.5 KIAA1856 ( 1134 res) fh03203 (1134) 142 26.8 5 KIAA1064 ( 1315 res) hj05008s1 (1315) 141 26.8 5.9 FLJ00022 ( 344 res) as00022 ( 344) 125 24.5 7.6 KIAA1935 ( 441 res) fk03135(revised) ( 441) 124 24.5 9.5 KIAA1205 ( 1217 res) fg03511a (1217) 133 25.9 9.7 KIAA0360 ( 1019 res) hh00062s1 (1019) 130 25.5 11 KIAA0339 ( 1709 res) hg01304(revised) (1709) 134 26.2 11 KIAA1813 ( 673 res) ph00819b ( 673) 125 24.8 11 KIAA0616 ( 634 res) hg03623 ( 634) 123 24.6 13 KIAA0009 ( 319 res) ha00176 ( 319) 116 23.5 13 KIAA0269 ( 567 res) ha06751 ( 567) 121 24.4 14 KIAA0213 ( 1626 res) ha04841s1 (1626) 130 25.8 14 KIAA0522 ( 1555 res) hg01393 (1555) 129 25.7 15 KIAA1814 ( 1285 res) ph00952 (1285) 127 25.4 15 KIAA1902 ( 1112 res) hj04383 (1112) 125 25.1 16 KIAA0711 ( 661 res) hg00358 ( 661) 120 24.3 16 KIAA1051 ( 402 res) hh04271 ( 402) 115 23.6 16 KIAA0900 ( 503 res) hk09606s1 ( 503) 117 23.9 16 KIAA1887 ( 967 res) fk02232 ( 967) 123 24.8 16 KIAA2011 ( 1091 res) pj02017 (1091) 124 25.0 17 KIAA1681 ( 1236 res) fh23697 (1236) 125 25.2 17 KIAA0039 ( 491 res) ha02030 ( 491) 115 23.7 19 KIAA1619 ( 869 res) fj14720 ( 869) 120 24.5 19 KIAA0666 ( 1085 res) hk02075 (1085) 122 24.8 19 KIAA1986 ( 334 res) pg00636 ( 334) 110 23.0 21 KIAA1971 ( 830 res) fk08985 ( 830) 118 24.3 21 FLJ00034 ( 1343 res) as00034 (1343) 122 24.9 22 KIAA1020 ( 638 res) fg00473s1 ( 638) 115 23.8 22 FLJ00403 ( 225 res) sj07657 ( 225) 105 22.3 23 KIAA1014 ( 1050 res) hk02388s2 (1050) 118 24.4 24 KIAA1100 ( 444 res) hk07907 ( 444) 110 23.1 24 KIAA0812 ( 1364 res) hg01044 (1364) 119 24.6 27 KIAA1366 ( 550 res) fj02695 ( 550) 110 23.3 28 KIAA0029 ( 974 res) ha00566 ( 974) 115 24.1 28 KIAA1991 ( 712 res) bf00209 ( 712) 112 23.6 29 KIAA1850 ( 1236 res) pf00747(revised) (1236) 117 24.4 29 KIAA1139 ( 1124 res) hk00330 (1124) 116 24.2 29 KIAA1029 ( 1015 res) fh00363 (1015) 115 24.1 29 KIAA0067 ( 1300 res) ha01038 (1300) 117 24.4 30 KIAA1187 ( 813 res) fk03027 ( 813) 112 23.7 31 FLJ00086 ( 399 res) as00086 ( 399) 105 22.6 32 KIAA1668 ( 791 res) fh11717 ( 791) 111 23.6 33 KIAA0775 ( 639 res) hk05255 ( 639) 109 23.2 33 KIAA0781 ( 950 res) hk09678 ( 950) 112 23.8 34 KIAA1739 ( 963 res) pj00464 ( 963) 112 23.8 34 KIAA1311 ( 889 res) fh11512 ( 889) 111 23.6 35 >>KIAA1883 ( 1480 res) fh02249 (1480 aa) initn: 114 init1: 114 opt: 178 Z-score: 111.5 bits: 30.4 E(): 0.52 Smith-Waterman score: 178; 33.566% identity (45.455% similar) in 143 aa overlap (77-208:732-860) 50 60 70 80 90 100 FLJ000 CRYSGCKMWPVRAVSIFSTLIGRRLAWRRGSEGGTACTKGLVLPAGDEPGPGPELFPESA .: :. .. ::. : :. .: KIAA18 PLERGDAVAGWGGHPALGCPHPPEDDSSLRAERGSLADLPMAPPASAPPEFLDPLMGAAA 710 720 730 740 750 760 110 120 130 140 150 160 FLJ000 LVQAGSAPPP-PPPPPPPPLCLLLLRAESEGAVLMTHPRAWEQRGGGLREAR---GGLG- : .::: :::::::: :: .. :. : : . :.:: : : KIAA18 PQYPGRGPPPAPPPPPPPP------RAPADPAASPDPPSAVASPGSGLSSPGPKPGDSGY 770 780 790 800 810 170 180 190 200 FLJ000 AARSPREQEQR------EEEELARRPRAPSAPSRRLEPDASNPGWPAAEPWPG ...: : ::: . ::::: : :: :: : : :: KIAA18 ETETPFSPEGAFPGGGAAEEEGVPRPRAPPEP-----PD---PGAPRPPPDPGPLPLPGP 820 830 840 850 860 KIAA18 REKPTFVVQVSTEQLLMSLREDVTRNLLGEKGATARETGPRKAGRGPGNREKVPGLNRDP 870 880 890 900 910 920 >>KIAA0346 ( 1682 res) hg01508s1 (1682 aa) initn: 182 init1: 105 opt: 154 Z-score: 98.2 bits: 28.2 E(): 2.9 Smith-Waterman score: 157; 32.331% identity (45.113% similar) in 133 aa overlap (90-208:220-338) 60 70 80 90 100 110 FLJ000 VSIFSTLIGRRLAWRRGSEGGTACTKGLVLPAGDEP-GPGPELFPESALVQAGSAP---- :.:.: .:: . :.: : KIAA03 NYGAKRGGPPVKRAAEPPVVQPVPPAALSGPSGEEGLSPGGKRRRGCNSEQTGLPPGLPL 190 200 210 220 230 240 120 130 140 150 160 FLJ000 -----PPPPPPPPPPLCLLLLRAESEGAVLMTHPRAWEQ-RGGGLREARGGLGAARSPRE ::::::::::: : . .:.: : .: . : : . :.. KIAA03 PPPPLPPPPPPPPPPLPGL----ATSPPFQLTKPGLWSTLHGDAWGPERKG---SAPPER 250 260 270 280 290 300 170 180 190 200 FLJ000 QEQREEEELARRPRAPSAPSRRLEPDASNPGW---PAAEPWPG ::::. .: ::. .: :: ::: : :: KIAA03 QEQRHSLP---HPYPYPAPAYTAHP----PGHRLVPAAPPGPGPRPPGAESHGCLPATRP 310 320 330 340 350 KIAA03 PGSDLRESRVQRSRMDSSVSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGLRGVEP 360 370 380 390 400 410 >>KIAA1713 ( 1652 res) fh22344 (1652 aa) initn: 229 init1: 124 opt: 151 Z-score: 96.7 bits: 27.9 E(): 3.5 Smith-Waterman score: 151; 47.727% identity (68.182% similar) in 44 aa overlap (84-127:1395-1435) 60 70 80 90 100 110 FLJ000 MWPVRAVSIFSTLIGRRLAWRRGSEGGTACTKGLVLPAGDEPGPGPELFPESALVQAGSA . .. . ::: : . .:..:::. KIAA17 FAFNRHLEQKGLGEVSLSSAPHQLRLANMLSPNMPMKEGDEVGGTAHTMPNKALVHP--- 1370 1380 1390 1400 1410 1420 120 130 140 150 160 170 FLJ000 PPPPPPPPPPPLCLLLLRAESEGAVLMTHPRAWEQRGGGLREARGGLGAARSPREQEQRE :::::::::::: : KIAA17 PPPPPPPPPPPLALPPPPPPPPPLPPPLPNAEVPSDQKQPPVTMETTKRLSWPQSTGICS 1430 1440 1450 1460 1470 1480 >>KIAA0865 ( 1900 res) hk06640y1 (1900 aa) initn: 123 init1: 123 opt: 152 Z-score: 96.5 bits: 28.0 E(): 3.5 Smith-Waterman score: 156; 29.508% identity (52.459% similar) in 122 aa overlap (92-207:1592-1701) 70 80 90 100 110 120 FLJ000 IFSTLIGRRLAWRRGSEGGTACTKGLVLPAGDEPG-PGPELFPESALVQAGSAPPPPPPP ::.:. :: :: :. .. :.::::::: KIAA08 PVLETNLKYPVQPEGSSPLSPQYSKSQKGDGDRPASPGLALFNGSGRASPPSTPPPPPPP 1570 1580 1590 1600 1610 1620 130 140 150 160 170 FLJ000 P-PPPLCLLLLRAESEGAVLMTHPRAWEQRGGGLREARGGLGAARSPREQEQREEEELA- : ::: : . . .. : ..: ..: .:..:. . . . .: KIAA08 PGPPP-------APYRPCAHLAFPPEPAPVNAG----KAG-PSAEAPKVHPKPNSAPVAG 1630 1640 1650 1660 180 190 200 FLJ000 ---RRPRAPSAPSRRLEPDASNPGWPAAEPWPG :. : .: . . :: . : :. : : KIAA08 PCSSFPKIPYSPVKATRADARKAGSSASPPAPYSPPSSRPLSSPLDELASLFNSGRSVLR 1670 1680 1690 1700 1710 1720 KIAA08 KSAAGRKIREAEGFETNMNISSRDDPSTSEITSETQDRNANNHGIQLSNSLSSAITAENG 1730 1740 1750 1760 1770 1780 >>KIAA1856 ( 1134 res) fh03203 (1134 aa) initn: 205 init1: 131 opt: 142 Z-score: 93.8 bits: 26.8 E(): 5 Smith-Waterman score: 147; 36.207% identity (42.241% similar) in 116 aa overlap (92-190:931-1045) 70 80 90 100 110 FLJ000 IFSTLIGRRLAWRRGSEGGTACTKGLVLPAGDEPGPGPELFPESA--LVQAGSAPPPPPP : : ::: : : : : . . ::::::: KIAA18 TSRCAKGGPLSPRKDAGRAKDRKDPRKKKKGKEAGPGAGLPPPRAPALPSEARAPPPPPP 910 920 930 940 950 960 120 130 140 150 160 FLJ000 PPP----------PPLCLLLLRAESEGAVLMTHPRAWEQRGGGLREARG-GLGAARSPRE ::: :: : : . :: : . : :::. : KIAA18 PPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLPPPQTRTLPAARTMR- 970 980 990 1000 1010 170 180 190 200 FLJ000 QEQREEEELARR----PRAPSAPSRRLEPDASNPGWPAAEPWPG : . : :: :: :: :.:: KIAA18 QPPPPRLALPRRRRSPPRPPSRPARRGPRPTPQARRRPRPSPRRLLRSPHSLCSPRLRPG 1020 1030 1040 1050 1060 1070 >>KIAA1064 ( 1315 res) hj05008s1 (1315 aa) initn: 301 init1: 141 opt: 141 Z-score: 92.5 bits: 26.8 E(): 5.9 Smith-Waterman score: 141; 50.000% identity (71.053% similar) in 38 aa overlap (88-123:528-564) 60 70 80 90 100 110 FLJ000 RAVSIFSTLIGRRLAWRRGSEGGTACTKGLVLPAGDEPGPGPE--LFPESALVQAGSAPP .::. .: :::. :.. .:.: :: KIAA10 AEAGAEDEKEVEELKKQGINPLPKPPPGVGLLPTPPRP-PGPQAPTSPNGRPMQGGPPPP 500 510 520 530 540 550 120 130 140 150 160 170 FLJ000 PPPPPPPPPLCLLLLRAESEGAVLMTHPRAWEQRGGGLREARGGLGAARSPREQEQREEE :::::::: KIAA10 PPPPPPPPGPPQMPMPVHEPLSPQQLQQQDMYNKKIPSLFEIVVRPTGQLAEKLGVRFPG 560 570 580 590 600 610 >>FLJ00022 ( 344 res) as00022 (344 aa) initn: 99 init1: 99 opt: 125 Z-score: 90.6 bits: 24.5 E(): 7.6 Smith-Waterman score: 125; 38.889% identity (51.852% similar) in 54 aa overlap (75-124:3-48) 50 60 70 80 90 100 FLJ000 RGCRYSGCKMWPVRAVSIFSTLIGRRLAWRRGSEGGTACTKGLVLPAGDEPGPGPELFPE :.: :. .: : ::::: . FLJ000 GSRSSCGAGSCRLG--------PGPGPSRAAR 10 20 110 120 130 140 150 160 FLJ000 SA----LVQAGSAPPPPPPPPPPPLCLLLLRAESEGAVLMTHPRAWEQRGGGLREARGGL . :. . :::: :::::: FLJ000 AMRSCFCVRRSRDPPPPQPPPPPPQRGTDQSTMPEVKDLSEALPETSMDPITGVGVVASR 30 40 50 60 70 80 >>KIAA1935 ( 441 res) fk03135(revised) (441 aa) initn: 87 init1: 87 opt: 124 Z-score: 88.9 bits: 24.5 E(): 9.5 Smith-Waterman score: 146; 32.331% identity (47.368% similar) in 133 aa overlap (76-208:38-154) 50 60 70 80 90 100 FLJ000 GCRYSGCKMWPVRAVSIFSTLIGRRLAWRRGSEGGTACTKGLVLPAGDEPGPGPELFPES :::.: : : . : . : : .. KIAA19 AAVAAEAAATAASPGEGGAGEAEPEMEPIPGSEAG---TDPLPVTATEASVPDGETDGQQ 10 20 30 40 50 60 110 120 130 140 150 160 FLJ000 ALVQAGSAPPPPPPPPPPPLCLLLLRAESEGAVLMTHPRAWEQRGGGLREARGGLGAARS . :: : ::::::: : :.: :: :. .. ..: :.. :: . KIAA19 SAPQADEPPLPPPPPPPGEL------ARSPEAV---GPELEAEEKLSVRVAES---AAAA 70 80 90 100 110 170 180 190 200 FLJ000 PREQEQREEEELARRPRAPSAPSRRLEPDASNPGWPAAEPWPG :. . : :. : :: .: :: .: :: : : KIAA19 PQGGPELPPSP-ASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQLIPGSEVRVT 120 130 140 150 160 170 KIAA19 LDHIIEDALVVSFRFGEKLFSGVLMDLSKRFGPHGIPVTVFPKREYKDKPEAMPLQSNTF 180 190 200 210 220 230 >>KIAA1205 ( 1217 res) fg03511a (1217 aa) initn: 195 init1: 116 opt: 133 Z-score: 88.7 bits: 25.9 E(): 9.7 Smith-Waterman score: 142; 45.455% identity (60.000% similar) in 55 aa overlap (80-124:177-230) 50 60 70 80 90 100 FLJ000 SGCKMWPVRAVSIFSTLIGRRLAWRRGSEGGTACTKGLVLPA-GDEPGPGPELFPESA-- : : : :. : .:. ::: : .. KIAA12 GPPEDEGDPKAGAGPPPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKPPEL-PSTVNA 150 160 170 180 190 200 110 120 130 140 150 FLJ000 ----LVQAG---SAPPPPPPPPPPPLCLLLLRAESEGAVLMTHPRAWEQRGGGLREARGG :.:.: .:::::::::::: KIAA12 EPLGLIQSGPHQAAPPPPPPPPPPPAPASEPKGGLTSPIFCSTKPKKLLKTSSFHLLRRR 210 220 230 240 250 260 >>KIAA0360 ( 1019 res) hh00062s1 (1019 aa) initn: 115 init1: 115 opt: 130 Z-score: 88.0 bits: 25.5 E(): 11 Smith-Waterman score: 133; 45.614% identity (61.404% similar) in 57 aa overlap (68-124:135-182) 40 50 60 70 80 90 FLJ000 GLTGVEGRGCRYSGCKMWPVRAVSIFSTLIGRRLAWRRGSEGGTACTKGLVLPAGDEPGP :. :. :. .: . ::.: :. . : KIAA03 DTEHSNPPDSGSSVPTDPTWGPERRGEESSGHFLVAATGTAAGGG--GGLIL-ASPKLGA 110 120 130 140 150 160 100 110 120 130 140 150 FLJ000 GPELFPESALVQAGSAPPPPPPPPPPPLCLLLLRAESEGAVLMTHPRAWEQRGGGLREAR : : :::. :::::::::::: KIAA03 TP-LPPEST-----PAPPPPPPPPPPPGVGSGHLNIPLILEELRVLQQRQIHQMQMTEQI 170 180 190 200 210 208 residues in 1 query sequences 2210786 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:33:53 2009 done: Fri Feb 27 10:33:53 2009 Total Scan time: 0.380 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]