# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00102.fasta.huge -Q ../query/FLJ00102.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00102, 353 aa vs ./tmplib.10216 library 2210641 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.4065+/-0.00397; mu= 16.6224+/- 0.268 mean_var=89.3817+/-19.384, 0's: 0 Z-trim: 1 B-trim: 31 in 1/39 Lambda= 0.135659 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0857 ( 733 res) hk06227 ( 733) 118 33.0 0.076 KIAA0483 ( 299 res) hj00879 ( 299) 91 27.2 1.7 FLJ00058 ( 164 res) as00058 ( 164) 86 25.8 2.4 KIAA1548 ( 545 res) fh15779 ( 545) 90 27.3 2.8 FLJ00310 ( 291 res) sh06047 ( 291) 87 26.4 2.9 KIAA0668 ( 742 res) hk02329 ( 742) 91 27.7 3 KIAA1009 ( 1345 res) hj03795(revised) (1345) 91 28.0 4.2 KIAA1418 ( 889 res) hj05336(revised) ( 889) 87 27.0 5.7 KIAA1589 ( 816 res) fj08951 ( 816) 86 26.8 6.2 KIAA1664 ( 920 res) fj04751s1 ( 920) 85 26.6 7.6 KIAA0687 ( 1175 res) hk02992 (1175) 86 27.0 7.7 KIAA1881 ( 1348 res) ah02284 (1348) 86 27.1 8.4 FLJ00313 ( 208 res) sh06759 ( 208) 77 24.2 9.3 KIAA1740 ( 1119 res) pj00674 (1119) 84 26.6 9.8 KIAA0103 ( 299 res) ha00802 ( 299) 78 24.6 10 KIAA0158 ( 367 res) ha03233 ( 367) 78 24.7 11 KIAA1994 ( 1117 res) bh00052 (1117) 82 26.2 13 FLJ00402 ( 137 res) sj07511 ( 137) 72 23.0 14 KIAA1115 ( 895 res) hk05464 ( 895) 80 25.6 15 KIAA1536 ( 645 res) fj00456(revised) ( 645) 78 25.1 16 KIAA0467 ( 2687 res) ff08895 (2687) 84 27.1 17 KIAA1331 ( 589 res) fh15253s1 ( 589) 77 24.8 17 KIAA0332 ( 1028 res) hg00939 (1028) 79 25.5 18 KIAA1046 ( 427 res) hh00940 ( 427) 75 24.2 19 KIAA0028 ( 904 res) ha00560 ( 904) 78 25.3 20 FLJ00178 ( 249 res) sj01102 ( 249) 72 23.3 20 KIAA0336 ( 1635 res) hg01120 (1635) 80 26.0 21 KIAA0337 ( 1609 res) hg01226 (1609) 79 25.8 24 KIAA0641 ( 1326 res) hj03494s1 (1326) 78 25.5 25 KIAA0454 ( 2296 res) bf02274 (2296) 80 26.2 26 FLJ00090 ( 770 res) as00090 ( 770) 75 24.6 27 KIAA0680 ( 635 res) hk02746 ( 635) 74 24.3 27 KIAA1650 ( 797 res) hk02174 ( 797) 75 24.6 27 KIAA0388 ( 751 res) hj00039 ( 751) 74 24.4 30 KIAA1461 ( 1498 res) fh17578 (1498) 76 25.2 34 KIAA0399 ( 2982 res) hg00651s2 (2982) 79 26.1 35 KIAA1531 ( 1206 res) ph00937 (1206) 75 24.8 35 KIAA2037 ( 494 res) pj01545 ( 494) 71 23.5 35 FLJ00170 ( 1310 res) sh07968 (1310) 75 24.9 36 KIAA0148 ( 704 res) fh23975 ( 704) 72 23.9 38 KIAA1594 ( 931 res) fj09468 ( 931) 73 24.3 39 KIAA0111 ( 412 res) ha00659 ( 412) 69 23.0 41 KIAA0763 ( 843 res) hk04726 ( 843) 72 24.0 42 KIAA0319 ( 1109 res) hg00378 (1109) 73 24.4 43 KIAA0383 ( 1781 res) hh00708s1 (1781) 75 25.1 44 KIAA0673 ( 1215 res) hk02385 (1215) 73 24.5 46 KIAA1732 ( 1915 res) bg00050 (1915) 75 25.1 46 KIAA0380 ( 1539 res) hh00518 (1539) 74 24.8 46 KIAA0375 ( 1540 res) hh00360s1 (1540) 74 24.8 46 FLJ00248 ( 501 res) sj08681 ( 501) 69 23.2 46 >>KIAA0857 ( 733 res) hk06227 (733 aa) initn: 108 init1: 51 opt: 118 Z-score: 126.5 bits: 33.0 E(): 0.076 Smith-Waterman score: 118; 24.793% identity (49.174% similar) in 242 aa overlap (26-253:33-262) 10 20 30 40 50 FLJ001 KPWYWVSWCSIGQVSLFFLGSALALGENVQPH-LQGCGPRMVAQRWFQGRCWSFT :....: ..:: :: :: KIAA08 GAAGAGRGRGRGADVAARPAASGPVRRGGGGRSARPSPARSCGG---AQSWFLTAFCRGR 10 20 30 40 50 60 70 80 90 100 FLJ001 ICPCSLGVHPE----APGDDKMGYM-GPYPSSLCFLWIFLGLREKEQKTPRRLRLILMGK .: :: : :: . :. . : :.. : : . : : : : . . KIAA08 VCHQVLGSAPARPDLAPRFSAMALVRGAEPAAGPSRW----LPTHVQVTVLRARGLRGKS 60 70 80 90 100 110 110 120 130 140 150 160 FLJ001 TGSGKSATGNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELEVIDTPNILSPQVSPEV .:.:... . ... .: . : :: : :: . :: .: :. :. . . KIAA08 SGAGSTSDAYTVI--QVGREKYSTSVVEKT--HGCPEWR-EECSFELPPGALDGLLRAQE 120 130 140 150 160 170 170 180 190 200 210 220 FLJ001 ADAICQAIVLSAPGPHAVLLVTQLGRFTDEDQ---QVVRRLQEVFGVGVLGHT--ILVFT ::: . :. . ..:.:. . :. :.. :.::::.: :: . . KIAA08 ADAGPAPWAASSAAACELVLTTMHRSLIGVDKFLGQATVALDEVFGAGRAQHTQWYKLHS 180 190 200 210 220 230 230 240 250 260 270 280 FLJ001 R--KEDLAGGSLEDYVRET-NNQALAWLDVTLARRHCGFNNRAQGEEQEAQLRELMEKVE . :.. : .: .. : :: . . .:... KIAA08 KPGKKEKERGEIEVTIQFTRNNLSASMFDLSMKDKPRSPFSKIRDKMKGKKKYDLESASA 240 250 260 270 280 290 290 300 310 320 330 340 FLJ001 AIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQGSEDVPGEESWLEGLSQIQKESE KIAA08 ILPSSAIEDPDLGSLGKMGKAKGFFLRNKLRKSSLTQSNTSLGSDSTLSSASGSLAYQGP 300 310 320 330 340 350 >>KIAA0483 ( 299 res) hj00879 (299 aa) initn: 92 init1: 64 opt: 91 Z-score: 102.1 bits: 27.2 E(): 1.7 Smith-Waterman score: 91; 28.866% identity (54.639% similar) in 97 aa overlap (182-278:170-260) 160 170 180 190 200 210 FLJ001 LEVIDTPNILSPQVSPEVADAICQAIVLSAPGPHAVLLVTQLGRFTDEDQQVVRRLQEVF ::: :.: . :: . ..: : .::. KIAA04 EYFDEKIVPILKRKLPGSDVSGRLMGSPPVPGPSAALTTMQLFSKQNPSRQEVTKLQQ-- 140 150 160 170 180 190 220 230 240 250 260 270 FLJ001 GVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQEA : . : . :. :. . .... .. ..: :. : : .: :. : : KIAA04 QVKTNGAGVTVLRREISELRTKVQEQQKQLQDQDQKLLEQTQI---IGEQN-ARLAELER 200 210 220 230 240 250 280 290 300 310 320 330 FLJ001 QLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQGSEDVPGEESWLE .:::.:: KIAA04 KLREVMESAVGNSSGSGQNEESPRKRKKATEAIDSLRKSKRLRNRK 260 270 280 290 >>FLJ00058 ( 164 res) as00058 (164 aa) initn: 48 init1: 48 opt: 86 Z-score: 99.6 bits: 25.8 E(): 2.4 Smith-Waterman score: 86; 28.070% identity (57.018% similar) in 114 aa overlap (88-199:34-140) 60 70 80 90 100 110 FLJ001 CSLGVHPEAPGDDKMGYMGPYPSSLCFLWIFLGLREKEQKTPRRLRLILMGKTGSGKSAT :.:. .. . : : : ::..:. FLJ000 GKYLCRRGTRVHTPTATCAFLPGIPGVNACFMGVSRSARAPPDGE---LAGGGGSSSSSL 10 20 30 40 50 60 120 130 140 150 160 170 FLJ001 GNSILGRDVFESKLSTRPVTKTSQRRSREWAGKELE-VIDTPNILSPQVSPEVA-DAICQ :.. :.. . ..: : .: : . ... .: : : .. .. :.. : . :. : FLJ000 GGTSLSQ-LRQGKRELRTLTPT-HAHTQGSVGWEREGRFSFCSLGLPRAFPAAERDTSSQ 70 80 90 100 110 180 190 200 210 220 230 FLJ001 AIVLSAPGPHAVLLVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGGSLE . :.::: : ::.:: : :. FLJ000 VKGHSGPGPDPV--VTHLGTFPDQLRLPCPPLSRKEPEPSPLSHPPQG 120 130 140 150 160 >>KIAA1548 ( 545 res) fh15779 (545 aa) initn: 37 init1: 37 opt: 90 Z-score: 98.2 bits: 27.3 E(): 2.8 Smith-Waterman score: 92; 23.451% identity (50.000% similar) in 226 aa overlap (78-287:118-329) 50 60 70 80 90 100 FLJ001 GRCWSFTICPCSLGVHPEAPGDDKMGYMGPYPSSLCFLW-------IFLGLREKEQKTPR .:.. :: :. :: ::. . KIAA15 DFKKNKLTLVVVEDDDQGKEQEHTFVFRLDHPKACKHLWKCAVEHHAFFRLRGPVQKSSH 90 100 110 120 130 140 110 120 130 140 150 FLJ001 RLRLILMGKT--GSGKSATGNSILGRDVFESKLSTRPVTKTSQR--RSREWAGKELEVID : .: .:. :::. .. .. ... :: . :.: . . : : :. KIAA15 RSGFIRLGSRFRYSGKTEYQTTKTNKARRSTSFERRPSKRYSRRTLQMKACATKPEELSV 150 160 170 180 190 200 160 170 180 190 200 210 FLJ001 TPNILSPQVSPEVADAICQAI-----VLSAPGPHAVLLVTQLGRFTDEDQQVVRRLQEVF :. . . . . : .. .:. . ::: : . . : ..:.. . . KIAA15 HNNVSTQSNGSQQAWGMRSALPVSPSISSAPVPVEIENLPQSPGTDQHDRKCIP-----L 210 220 230 240 250 260 220 230 240 250 260 270 FLJ001 GVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQEA .. .:. :. : :. :.: : . ::. ::: ::..: : :.. . : . KIAA15 NIDLLNSPDLLETTIGDVIGAS--DTM-ETS-QALN--DVNVATRLPGLG---EPEVEYE 270 280 290 300 310 280 290 300 310 320 330 FLJ001 QLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQGSEDVPGEESWLE :.. ::.. . :: KIAA15 TLKDTSEKLKQLEMENSPLLSPRSNIDVNINSQEEVVKLTEKCLNNVIESPGLNVMRVPP 320 330 340 350 360 370 >>FLJ00310 ( 291 res) sh06047 (291 aa) initn: 59 init1: 59 opt: 87 Z-score: 98.0 bits: 26.4 E(): 2.9 Smith-Waterman score: 87; 28.125% identity (55.208% similar) in 96 aa overlap (259-353:11-96) 230 240 250 260 270 280 FLJ001 LAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQ-EAQLRELMEKVEAIMWEN :: : . : . :..:. : :.:: FLJ003 EKRYSQKKVIGFRNSPNDLSQTQQQIKEMKE-----MYEN 10 20 30 290 300 310 320 330 340 FLJ001 EGDYYSNKAYQYTQQNFRLKELQERQVSQGQGSEDVPGEESWLEGLSQIQKESEEAHRCL : .:.. ... . :. .::... : .:: .:. : ...::. :. FLJ003 AEDKVNNSTGKWSCVEERICHLQHENPCLEQQLDDVHQKEDHKEIVTNIQRGFIES---- 40 50 60 70 80 90 350 FLJ001 LGKADL :: :: FLJ003 -GKKDLMLEEKNKKLMNECDHLKESLFQYEREKAERVVVVRQLQQEAADSLKKLTMLESP 100 110 120 130 140 150 >>KIAA0668 ( 742 res) hk02329 (742 aa) initn: 113 init1: 83 opt: 91 Z-score: 97.9 bits: 27.7 E(): 3 Smith-Waterman score: 91; 38.000% identity (64.000% similar) in 50 aa overlap (240-289:477-526) 210 220 230 240 250 260 FLJ001 VFGVGVLGHTILVFTRKEDLAGGSLEDYVRETNNQALAWLDVTLARRHCGFNNRAQGEEQ ....: ::.. ::: : . : ::. KIAA06 QQELAALALKQSSVAEEVGLLPQQIQAVRDDVESQFPAWISQFLARGGGGRVGLLQREEM 450 460 470 480 490 500 270 280 290 300 310 320 FLJ001 EAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQGSEDVPGEESW .:::::: :. . . : .: KIAA06 QAQLRELESKILTHVAEMQGKSAREAAASLSLTLQKEGVIGVTEEQVHHIVKQALQRYSE 510 520 530 540 550 560 >>KIAA1009 ( 1345 res) hj03795(revised) (1345 aa) initn: 70 init1: 43 opt: 91 Z-score: 95.1 bits: 28.0 E(): 4.2 Smith-Waterman score: 91; 28.916% identity (57.831% similar) in 83 aa overlap (267-349:587-661) 240 250 260 270 280 290 FLJ001 YVRETNNQALAWLDVTLARRHCGFNNRAQGEEQEAQLRELMEKVEAIMWENEGDYYSNKA .: : .:.:: .. : ... . : : KIAA10 MFKRVQEAEDKWRGAQALIEQIKATFSEKEKELENKLEELKKQQEKELFKLNQDNY---I 560 570 580 590 600 610 300 310 320 330 340 350 FLJ001 YQYTQQNFRLKELQERQVSQGQGSEDVPGEESWLEGLSQIQKESEEAHRCLLGKADL : ..:. . ..: . :.... : ::. :.::::: .: . : : KIAA10 LQAKLSSFEETNKKQRWLHFGEAADPVTGEK-----LKQIQKEIQEQETLLQGYQQENER 620 630 640 650 660 KIAA10 LYNQVKDLQEQNKKNEERMFKENQSLFSEVASLKEQMHKSRFLSQVVEDSEPTRNQNFTD 670 680 690 700 710 720 >>KIAA1418 ( 889 res) hj05336(revised) (889 aa) initn: 114 init1: 73 opt: 87 Z-score: 92.8 bits: 27.0 E(): 5.7 Smith-Waterman score: 87; 41.026% identity (66.667% similar) in 39 aa overlap (290-327:678-716) 260 270 280 290 300 310 FLJ001 FNNRAQGEEQEAQLRELMEKVEAIMWENEGDYYSNKAYQYTQQNFRLKELQERQVSQGQG : : .:: .: .: :::.: : :: . . : KIAA14 SWLGFSSMDTNGSYTANDLDEMGQDSVRKTDEYLEKALEYLRQIFRLSEAQLRQFTLALG 650 660 670 680 690 700 320 330 340 350 FLJ001 S-EDVPGEESWLEGLSQIQKESEEAHRCLLGKADL . .: :.. KIAA14 TTQDENGKKQLPDCIVGEDGLILTPLGRYQIINGLRRFEIEYQGDPELQPIRSYEIASLV 710 720 730 740 750 760 >>KIAA1589 ( 816 res) fj08951 (816 aa) initn: 48 init1: 48 opt: 86 Z-score: 92.1 bits: 26.8 E(): 6.2 Smith-Waterman score: 86; 30.120% identity (61.446% similar) in 83 aa overlap (91-166:208-284) 70 80 90 100 110 FLJ001 GVHPEAPGDDKMGYMGPYPSSLCFLWIFLGLREKEQKTPRRLRLI-LMGKTGSGKSATGN .:. . : ..:... ..:.::.::: : : KIAA15 TKRKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHLKVVSIFGNTGDGKSHTLN 180 190 200 210 220 230 120 130 140 150 160 170 FLJ001 SIL--GRDVFESKLSTRPVTKTSQRRSREWAG----KELEVIDTPNILSPQVSPEVADAI . ::.::. : :. .. ::. ... :::: ..:. :. KIAA15 HTFFYGREVFK----TSPTQESC--TVGVWAAYDPVHKVAVIDTEGLLGATVNLSQRTRL 240 250 260 270 280 290 180 190 200 210 220 230 FLJ001 CQAIVLSAPGPHAVLLVTQLGRFTDEDQQVVRRLQEVFGVGVLGHTILVFTRKEDLAGGS KIAA15 LLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTARCGLDVPLSTLG 300 310 320 330 340 350 >>KIAA1664 ( 920 res) fj04751s1 (920 aa) initn: 39 init1: 39 opt: 85 Z-score: 90.5 bits: 26.6 E(): 7.6 Smith-Waterman score: 85; 34.426% identity (50.820% similar) in 61 aa overlap (21-79:1-54) 10 20 30 40 50 FLJ001 KPWYWVSWCSIGQVSLFFLGSALALGENVQPHLQG-CGPRMVAQRWFQGRCWSFTICPCS :: ..:. . : : :: : .: ::. :: KIAA16 SAGSMGKAAAPSRGGGCGGRS------RGLSSLFTVVPC- 10 20 30 60 70 80 90 100 110 FLJ001 LGVHPEAPG-DDKMGYMGPYPSSLCFLWIFLGLREKEQKTPRRLRLILMGKTGSGKSATG :. : ::: . . . :: : KIAA16 LSCHAAAPGMSASTSGSGPEPKPQPQPVPEPERGPLSEQVSEAVSEAVPRSEPVSETTSE 40 50 60 70 80 90 353 residues in 1 query sequences 2210641 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:34:33 2009 done: Fri Feb 27 10:34:33 2009 Total Scan time: 0.480 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]