# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00114.fasta.nr -Q ../query/FLJ00114.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00114, 348 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826780 sequences Expectation_n fit: rho(ln(x))= 4.7904+/-0.000179; mu= 11.8683+/- 0.010 mean_var=64.6243+/-12.489, 0's: 44 Z-trim: 49 B-trim: 0 in 0/67 Lambda= 0.159542 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676442|dbj|BAB84873.1| FLJ00114 protein [Homo ( 348) 2308 539.8 3.1e-151 gi|119572526|gb|EAW52141.1| integrin, alpha X (com ( 719) 2161 506.2 8.2e-141 gi|487830|gb|AAA59180.1| eukocyte adhesion glycopr (1163) 2161 506.3 1.2e-140 gi|146345441|sp|P20702.3|ITAX_HUMAN RecName: Full= (1163) 2161 506.3 1.2e-140 gi|114662188|ref|XP_510951.2| PREDICTED: integrin (1203) 2150 503.8 7.1e-140 gi|23398603|gb|AAH38237.1| ITGAX protein [Homo sap (1169) 2146 502.9 1.3e-139 gi|60654537|gb|AAX29959.1| integrin alpha X [synth (1170) 2146 502.9 1.3e-139 gi|119572525|gb|EAW52140.1| integrin, alpha X (com ( 725) 2139 501.1 2.8e-139 gi|386831|gb|AAA51620.1|AAA51620 integrin alpha su (1163) 2136 500.6 6.4e-139 gi|148749338|gb|ABR09545.1| CD11c protein [Callith (1161) 1938 455.0 3.4e-125 gi|164507177|gb|ABY59790.1| integrin alpha X [Equu (1160) 1700 400.2 1e-108 gi|73958318|ref|XP_547049.2| PREDICTED: similar to (1149) 1604 378.1 4.6e-102 gi|109459464|ref|XP_574569.2| PREDICTED: similar t (1179) 1548 365.3 3.6e-98 gi|109462952|ref|XP_001080404.1| PREDICTED: simila (1179) 1546 364.8 4.9e-98 gi|149067645|gb|EDM17197.1| rCG40584, isoform CRA_ (1182) 1546 364.8 4.9e-98 gi|47847422|dbj|BAD21383.1| mFLJ00114 protein [Mus (1188) 1546 364.8 5e-98 gi|74215118|dbj|BAE41792.1| unnamed protein produc (1169) 1539 363.2 1.5e-97 gi|48428495|sp|Q9QXH4.1|ITAX_MOUSE RecName: Full=I (1169) 1539 363.2 1.5e-97 gi|74214868|dbj|BAE33446.1| unnamed protein produc (1169) 1539 363.2 1.5e-97 gi|119572527|gb|EAW52142.1| integrin, alpha X (com ( 218) 1393 329.0 5.4e-88 gi|73958316|ref|XP_848776.1| PREDICTED: similar to (1166) 1371 324.5 6.5e-86 gi|194218991|ref|XP_001915421.1| PREDICTED: simila (1160) 1352 320.1 1.3e-84 gi|162317970|gb|AAI56096.1| Integrin, alpha D [syn (1161) 1316 311.8 4.2e-82 gi|12643717|sp|Q13349.1|ITAD_HUMAN RecName: Full=I (1162) 1316 311.8 4.2e-82 gi|62087470|dbj|BAD92182.1| PREDICTED: integrin, a (1177) 1316 311.9 4.3e-82 gi|126334038|ref|XP_001370553.1| PREDICTED: simila (1224) 1303 308.9 3.5e-81 gi|160837835|ref|NP_001104272.1| integrin, alpha D (1168) 1282 304.0 9.6e-80 gi|151556938|gb|AAI49717.1| ITGAD protein [Bos tau (1165) 1257 298.3 5.2e-78 gi|48428189|sp|Q9QYE7.1|ITAD_RAT RecName: Full=Int (1161) 1204 286.1 2.4e-74 gi|149067641|gb|EDM17193.1| rCG39970 [Rattus norve (1163) 1204 286.1 2.4e-74 gi|148685686|gb|EDL17633.1| mCG133512, isoform CRA (1168) 1197 284.5 7.4e-74 gi|88911344|sp|Q3V0T4.1|ITAD_MOUSE RecName: Full=I (1168) 1197 284.5 7.4e-74 gi|126334042|ref|XP_001370610.1| PREDICTED: simila (1154) 1183 281.2 6.9e-73 gi|74220882|dbj|BAE33629.1| unnamed protein produc (1202) 1181 280.8 9.8e-73 gi|126334040|ref|XP_001370580.1| PREDICTED: simila (1156) 1157 275.3 4.4e-71 gi|73958270|ref|XP_856370.1| PREDICTED: similar to (1036) 1141 271.5 5.1e-70 gi|73958268|ref|XP_848527.1| PREDICTED: similar to (1153) 1141 271.6 5.6e-70 gi|193785385|dbj|BAG54538.1| unnamed protein produ ( 558) 1118 266.0 1.3e-68 gi|386975|gb|AAA59903.1| neutrophil adherence rece (1145) 1118 266.3 2.2e-68 gi|64654595|gb|AAH96346.1| Integrin, alpha M (comp (1152) 1118 266.3 2.2e-68 gi|1708572|sp|P11215.2|ITAM_HUMAN RecName: Full=In (1152) 1118 266.3 2.2e-68 gi|307148|gb|AAA59544.1| glycoprotein Mac-1 (1153) 1118 266.3 2.2e-68 gi|33340728|gb|AAQ14925.1| Mac-1 alpha subunit [Pa (1144) 1117 266.0 2.6e-68 gi|64654539|gb|AAH96347.1| Integrin, alpha M (comp (1152) 1114 265.4 4.1e-68 gi|119572529|gb|EAW52144.1| integrin, alpha M (com (1152) 1114 265.4 4.1e-68 gi|119572528|gb|EAW52143.1| integrin, alpha M (com (1153) 1114 265.4 4.2e-68 gi|148685685|gb|EDL17632.1| mCG133512, isoform CRA (1164) 1114 265.4 4.2e-68 gi|74229861|gb|AAX46797.1| integrin alpha M [Bos t (1152) 1112 264.9 5.7e-68 gi|307114|gb|AAA59491.1| leukocyte adhesion glycop (1152) 1109 264.2 9.2e-68 gi|124127039|gb|ABM92271.1| CD11b [Ovis aries] (1152) 1106 263.5 1.5e-67 >>gi|18676442|dbj|BAB84873.1| FLJ00114 protein [Homo sap (348 aa) initn: 2308 init1: 2308 opt: 2308 Z-score: 2871.4 bits: 539.8 E(): 3.1e-151 Smith-Waterman score: 2308; 100.000% identity (100.000% similar) in 348 aa overlap (1-348:1-348) 10 20 30 40 50 60 FLJ001 EELWSRPYLPGQSRHLLQLPRKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 EELWSRPYLPGQSRHLLQLPRKQGQLRSLHLTCDSAPVGSQGTWSTSCRINHLIFRGGAQ 10 20 30 40 50 60 70 80 90 100 110 120 FLJ001 ITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSHEQFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 ITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTFQLELPVKYAVYTVVSSHEQFT 70 80 90 100 110 120 130 140 150 160 170 180 FLJ001 KYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMDVEVSHPQNPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 KYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFWVPVELNQEAVWMDVEVSHPQNPS 130 140 150 160 170 180 190 200 210 220 230 240 FLJ001 LRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGW 190 200 210 220 230 240 250 260 270 280 290 300 FLJ001 VRQILQKKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 VRQILQKKVSVVSVAEITFDTSVYSQLPGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIG 250 260 270 280 290 300 310 320 330 340 FLJ001 GLLLLALITAVLYKVGFFKRQYKEMMEEANGQIAPENGTQTPSPPSEK :::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GLLLLALITAVLYKVGFFKRQYKEMMEEANGQIAPENGTQTPSPPSEK 310 320 330 340 >>gi|119572526|gb|EAW52141.1| integrin, alpha X (complem (719 aa) initn: 2156 init1: 2156 opt: 2161 Z-score: 2684.2 bits: 506.2 E(): 8.2e-141 Smith-Waterman score: 2161; 95.942% identity (97.391% similar) in 345 aa overlap (4-348:377-719) 10 20 30 FLJ001 EELWSRPYLPGQSRHLLQLPRKQGQLRSLHLTC .:.: : : . . .:::::::::::: gi|119 KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHP--AGLSYRYVAEGQKQGQLRSLHLTC 350 360 370 380 390 400 40 50 60 70 80 90 FLJ001 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR 410 420 430 440 450 460 100 110 120 130 140 150 FLJ001 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS 470 480 490 500 510 520 160 170 180 190 200 210 FLJ001 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL 530 540 550 560 570 580 220 230 240 250 260 270 FLJ001 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF 590 600 610 620 630 640 280 290 300 310 320 330 FLJ001 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI 650 660 670 680 690 700 340 FLJ001 APENGTQTPSPPSEK ::::::::::::::: gi|119 APENGTQTPSPPSEK 710 >>gi|487830|gb|AAA59180.1| eukocyte adhesion glycoprotei (1163 aa) initn: 2156 init1: 2156 opt: 2161 Z-score: 2681.3 bits: 506.3 E(): 1.2e-140 Smith-Waterman score: 2161; 95.942% identity (97.391% similar) in 345 aa overlap (4-348:821-1163) 10 20 30 FLJ001 EELWSRPYLPGQSRHLLQLPRKQGQLRSLHLTC .:.: : : . . .:::::::::::: gi|487 KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHP--AGLSYRYVAEGQKQGQLRSLHLTC 800 810 820 830 840 40 50 60 70 80 90 FLJ001 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|487 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR 850 860 870 880 890 900 100 110 120 130 140 150 FLJ001 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|487 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS 910 920 930 940 950 960 160 170 180 190 200 210 FLJ001 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|487 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL 970 980 990 1000 1010 1020 220 230 240 250 260 270 FLJ001 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|487 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF 1030 1040 1050 1060 1070 1080 280 290 300 310 320 330 FLJ001 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|487 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI 1090 1100 1110 1120 1130 1140 340 FLJ001 APENGTQTPSPPSEK ::::::::::::::: gi|487 APENGTQTPSPPSEK 1150 1160 >>gi|146345441|sp|P20702.3|ITAX_HUMAN RecName: Full=Inte (1163 aa) initn: 2156 init1: 2156 opt: 2161 Z-score: 2681.3 bits: 506.3 E(): 1.2e-140 Smith-Waterman score: 2161; 95.942% identity (97.391% similar) in 345 aa overlap (4-348:821-1163) 10 20 30 FLJ001 EELWSRPYLPGQSRHLLQLPRKQGQLRSLHLTC .:.: : : . . .:::::::::::: gi|146 KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHP--AGLSYRYVAEGQKQGQLRSLHLTC 800 810 820 830 840 40 50 60 70 80 90 FLJ001 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR 850 860 870 880 890 900 100 110 120 130 140 150 FLJ001 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS 910 920 930 940 950 960 160 170 180 190 200 210 FLJ001 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL 970 980 990 1000 1010 1020 220 230 240 250 260 270 FLJ001 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF 1030 1040 1050 1060 1070 1080 280 290 300 310 320 330 FLJ001 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|146 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI 1090 1100 1110 1120 1130 1140 340 FLJ001 APENGTQTPSPPSEK ::::::::::::::: gi|146 APENGTQTPSPPSEK 1150 1160 >>gi|114662188|ref|XP_510951.2| PREDICTED: integrin alph (1203 aa) initn: 2145 init1: 2145 opt: 2150 Z-score: 2667.5 bits: 503.8 E(): 7.1e-140 Smith-Waterman score: 2150; 95.362% identity (97.101% similar) in 345 aa overlap (4-348:861-1203) 10 20 30 FLJ001 EELWSRPYLPGQSRHLLQLPRKQGQLRSLHLTC .:.: : : . . .:::.:::::::: gi|114 KTLLVGSNLELNAEVMVWNDGEDSYGTTITFSHP--AGLSYRYVAEGQKQGELRSLHLTC 840 850 860 870 880 40 50 60 70 80 90 FLJ001 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR 890 900 910 920 930 940 100 110 120 130 140 150 FLJ001 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS 950 960 970 980 990 1000 160 170 180 190 200 210 FLJ001 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL 1010 1020 1030 1040 1050 1060 220 230 240 250 260 270 FLJ001 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|114 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQTLQKKVSVVSVAEITFDTSVYSQLPGQEAF 1070 1080 1090 1100 1110 1120 280 290 300 310 320 330 FLJ001 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI 1130 1140 1150 1160 1170 1180 340 FLJ001 APENGTQTPSPPSEK ::::::::::::::: gi|114 APENGTQTPSPPSEK 1190 1200 >>gi|23398603|gb|AAH38237.1| ITGAX protein [Homo sapiens (1169 aa) initn: 2215 init1: 2140 opt: 2146 Z-score: 2662.7 bits: 502.9 E(): 1.3e-139 Smith-Waterman score: 2146; 95.627% identity (97.376% similar) in 343 aa overlap (4-346:821-1161) 10 20 30 FLJ001 EELWSRPYLPGQSRHLLQLPRKQGQLRSLHLTC .:.: : : . . .:::::::::::: gi|233 KSLLVGSNLELNAEVMVWNDGEDSYGTTVTFSHP--AGLSYRYVAEGQKQGQLRSLHLTC 800 810 820 830 840 40 50 60 70 80 90 FLJ001 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|233 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR 850 860 870 880 890 900 100 110 120 130 140 150 FLJ001 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|233 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS 910 920 930 940 950 960 160 170 180 190 200 210 FLJ001 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|233 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL 970 980 990 1000 1010 1020 220 230 240 250 260 270 FLJ001 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|233 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF 1030 1040 1050 1060 1070 1080 280 290 300 310 320 330 FLJ001 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|233 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI 1090 1100 1110 1120 1130 1140 340 FLJ001 APENGTQTPSPPSEK ::::::::::::. gi|233 APENGTQTPSPPTPHYPQDNV 1150 1160 >>gi|60654537|gb|AAX29959.1| integrin alpha X [synthetic (1170 aa) initn: 2215 init1: 2140 opt: 2146 Z-score: 2662.6 bits: 502.9 E(): 1.3e-139 Smith-Waterman score: 2146; 95.627% identity (97.376% similar) in 343 aa overlap (4-346:821-1161) 10 20 30 FLJ001 EELWSRPYLPGQSRHLLQLPRKQGQLRSLHLTC .:.: : : . . .:::::::::::: gi|606 KSLLVGSNLELNAEVMVWNDGEDSYGTTVTFSHP--AGLSYRYVAEGQKQGQLRSLHLTC 800 810 820 830 840 40 50 60 70 80 90 FLJ001 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR 850 860 870 880 890 900 100 110 120 130 140 150 FLJ001 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS 910 920 930 940 950 960 160 170 180 190 200 210 FLJ001 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL 970 980 990 1000 1010 1020 220 230 240 250 260 270 FLJ001 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF 1030 1040 1050 1060 1070 1080 280 290 300 310 320 330 FLJ001 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI 1090 1100 1110 1120 1130 1140 340 FLJ001 APENGTQTPSPPSEK ::::::::::::. gi|606 APENGTQTPSPPTPHYPQDNVL 1150 1160 1170 >>gi|119572525|gb|EAW52140.1| integrin, alpha X (complem (725 aa) initn: 1410 init1: 1385 opt: 2139 Z-score: 2656.8 bits: 501.1 E(): 2.8e-139 Smith-Waterman score: 2139; 94.302% identity (95.726% similar) in 351 aa overlap (4-348:377-725) 10 20 30 FLJ001 EELWSRPYLPGQSRHLLQLPRKQGQLRSLHLTC .:.: : : . . .:::::::::::: gi|119 KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHP--AGLSYRYVAEGQKQGQLRSLHLTC 350 360 370 380 390 400 40 50 60 70 80 90 FLJ001 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR 410 420 430 440 450 460 100 110 120 130 140 FLJ001 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQ------VNNLGQ :::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|119 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQAVPSVQVNNLGQ 470 480 490 500 510 520 150 160 170 180 190 200 FLJ001 RDLPVSINFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RDLPVSINFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDC 530 540 550 560 570 580 210 220 230 240 250 260 FLJ001 SIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SIAGCLRFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQL 590 600 610 620 630 640 270 280 290 300 310 320 FLJ001 PGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PGQEAFMRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMME 650 660 670 680 690 700 330 340 FLJ001 EANGQIAPENGTQTPSPPSEK ::::::::::::::::::::: gi|119 EANGQIAPENGTQTPSPPSEK 710 720 >>gi|386831|gb|AAA51620.1|AAA51620 integrin alpha subuni (1163 aa) initn: 2131 init1: 2131 opt: 2136 Z-score: 2650.2 bits: 500.6 E(): 6.4e-139 Smith-Waterman score: 2136; 95.362% identity (96.812% similar) in 345 aa overlap (4-348:821-1163) 10 20 30 FLJ001 EELWSRPYLPGQSRHLLQLPRKQGQLRSLHLTC .:.: : : . . .:::::::::::: gi|386 KSLLVGSNLELNAEVMVWNDGEDSYGTTITFSHP--AGLSYRYVAEGQKQGQLRSLHLTC 800 810 820 830 840 40 50 60 70 80 90 FLJ001 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 DSAPVGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPR 850 860 870 880 890 900 100 110 120 130 140 150 FLJ001 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 TSKTTFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVS 910 920 930 940 950 960 160 170 180 190 200 210 FLJ001 INFWVPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCL ::::::::::::::::::::: :::::::::::::: ::::::::::::::::::::::: gi|386 INFWVPVELNQEAVWMDVEVSLPQNPSLRCSSEKIAGPASDFLAHIQKNPVLDCSIAGCL 970 980 990 1000 1010 1020 220 230 240 250 260 270 FLJ001 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 RFRCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF 1030 1040 1050 1060 1070 1080 280 290 300 310 320 330 FLJ001 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|386 MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQI 1090 1100 1110 1120 1130 1140 340 FLJ001 APENGTQTPSPPSEK ::::::::::::::: gi|386 APENGTQTPSPPSEK 1150 1160 >>gi|148749338|gb|ABR09545.1| CD11c protein [Callithrix (1161 aa) initn: 1932 init1: 1932 opt: 1938 Z-score: 2404.0 bits: 455.0 E(): 3.4e-125 Smith-Waterman score: 1938; 86.944% identity (94.955% similar) in 337 aa overlap (10-344:824-1159) 10 20 30 FLJ001 EELWSRPYLPG--QSRHLLQLPRKQGQLRSLHLTCDSAP :: . ::. . .::::::::.::::::: gi|148 LVGSNLELNAEVMVWNDGEDSYGTTITFSHPGGLSFRHVAE-GQKQGQLRSLRLTCDSAP 800 810 820 830 840 850 40 50 60 70 80 90 FLJ001 VGSQGTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKT .:::: :::::::::.:::::::::::::::.::::::::.:::.::::::::::::::: gi|148 AGSQGIWSTSCRINHVIFRGGAQITFLATFDISPKAVLGDQLLLVANVSSENNTPRTSKT 860 870 880 890 900 910 100 110 120 130 140 150 FLJ001 TFQLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFW :::::::::::::::.::::: :::.::: .:::::.:: ::::::::::::::::::.: gi|148 TFQLELPVKYAVYTVASSHEQSTKYFNFSAAEEKESRVATHRYQVNNLGQRDLPVSINLW 920 930 940 950 960 970 160 170 180 190 200 210 FLJ001 VPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCLRFRC ::::::::::: .::.::::.:::.:::::::::.::::.::::::::::.::::::::: gi|148 VPVELNQEAVWTEVEISHPQDPSLQCSSEKIAPPVSDFLVHIQKNPVLDCTIAGCLRFRC 980 990 1000 1010 1020 1030 220 230 240 250 260 270 FLJ001 DVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAFMRAQ :::::::::::::::::::::::::: ::::::::::::::::::::::::::::: :: gi|148 DVPSFSVQEELDFTLKGNLSFGWVRQTSQKKVSVVSVAEITFDTSVYSQLPGQEAFMSAQ 1040 1050 1060 1070 1080 1090 280 290 300 310 320 330 FLJ001 TTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANGQIAPEN : :::::::.:::::::::::.:::::::::::.:::::::::::::::::::::::::: gi|148 TMTVLEKYKIHNPTPLIVGSSVGGLLLLALITAALYKVGFFKRQYKEMMEEANGQIAPEN 1100 1110 1120 1130 1140 1150 340 FLJ001 GTQTPSPPSEK :. :.: gi|148 RTSDPQPAQ 1160 348 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Sat Feb 28 00:18:29 2009 done: Sat Feb 28 00:24:24 2009 Total Scan time: 814.330 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]