# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00118.fasta.huge -Q ../query/FLJ00118.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00118, 123 aa vs ./tmplib.10216 library 2210871 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.7142+/-0.00374; mu= 15.8733+/- 0.254 mean_var=77.6423+/-16.117, 0's: 0 Z-trim: 3 B-trim: 0 in 0/40 Lambda= 0.145554 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00095 ( 142 res) as00095 ( 142) 905 197.8 1.3e-52 KIAA0046 ( 872 res) ha00519s1 ( 872) 112 32.4 0.045 KIAA1400 ( 1093 res) hk08136 (1093) 104 30.9 0.16 KIAA0773 ( 336 res) hk05140 ( 336) 86 26.4 1.2 KIAA1399 ( 452 res) hk07377 ( 452) 84 26.1 1.9 KIAA0501 ( 122 res) hg00500 ( 122) 76 23.6 2.9 KIAA0149 ( 830 res) ha01221 ( 830) 81 25.9 4 KIAA1147 ( 451 res) pf02131 ( 451) 76 24.5 5.9 FLJ00048 ( 146 res) as00048 ( 146) 68 22.0 10 KIAA0896 ( 2820 res) hk08890s2 (2820) 78 26.1 12 KIAA1523 ( 687 res) fh16681(revised) ( 687) 72 23.9 13 KIAA0909 ( 1234 res) hk10471 (1234) 74 24.7 14 KIAA1433 ( 652 res) hh05535 ( 652) 71 23.6 15 KIAA2031 ( 515 res) ef03841 ( 515) 70 23.3 15 KIAA0794 ( 490 res) hk06006 ( 490) 69 23.0 17 KIAA0305 ( 1547 res) hg00042 (1547) 73 24.6 18 KIAA1096 ( 1919 res) pf00402 (1919) 73 24.8 20 KIAA0981 ( 578 res) hj07094 ( 578) 68 22.9 22 KIAA1220 ( 791 res) fh03489 ( 791) 69 23.4 22 FLJ00358 ( 217 res) sh03894 ( 217) 64 21.4 23 FLJ00008 ( 217 res) as00008 ( 217) 64 21.4 23 FLJ00099 ( 217 res) as00099 ( 217) 64 21.4 23 KIAA0680 ( 635 res) hk02746 ( 635) 67 22.8 26 KIAA0101 ( 130 res) ha00771 ( 130) 61 20.5 27 KIAA0760 ( 1224 res) hk04642s1 (1224) 69 23.6 28 KIAA1908 ( 445 res) ah02604 ( 445) 65 22.1 29 KIAA0548 ( 452 res) hh00769 ( 452) 65 22.1 29 FLJ00396 ( 172 res) sj06426 ( 172) 61 20.7 31 KIAA1816 ( 1162 res) fh16716 (1162) 68 23.4 32 KIAA2024 ( 437 res) ff08438 ( 437) 64 21.9 33 FLJ00345 ( 339 res) sf00014 ( 339) 63 21.5 34 KIAA1947 ( 608 res) fh23660 ( 608) 65 22.3 34 KIAA1253 ( 472 res) hh14119a ( 472) 64 22.0 35 FLJ00416 ( 221 res) sj04686 ( 221) 61 20.8 36 FLJ00063 ( 133 res) as00063 ( 133) 59 20.1 36 KIAA1323 ( 396 res) fh13878 ( 396) 63 21.6 36 KIAA0298 ( 901 res) hf00341(revised) ( 901) 66 22.8 37 KIAA1993 ( 532 res) bg00180 ( 532) 64 22.0 37 FLJ00034 ( 1343 res) as00034 (1343) 67 23.3 39 KIAA0997 ( 646 res) hk08613 ( 646) 64 22.2 41 KIAA0971 ( 665 res) hj06832 ( 665) 64 22.2 42 KIAA0593 ( 2005 res) hj02824s1 (2005) 68 23.8 42 KIAA1551 ( 1249 res) fh21239 (1249) 66 23.0 44 KIAA1676 ( 735 res) fh07095 ( 735) 64 22.3 44 KIAA1317 ( 435 res) fh13117 ( 435) 62 21.5 44 KIAA1136 ( 596 res) hj01467 ( 596) 63 21.9 45 KIAA0692 ( 783 res) hk03772 ( 783) 64 22.3 45 KIAA0319 ( 1109 res) hg00378 (1109) 65 22.7 47 KIAA0267 ( 666 res) ha07045 ( 666) 63 22.0 48 KIAA0671 ( 537 res) hk02368 ( 537) 62 21.6 50 >>FLJ00095 ( 142 res) as00095 (142 aa) initn: 905 init1: 905 opt: 905 Z-score: 1038.2 bits: 197.8 E(): 1.3e-52 Smith-Waterman score: 905; 100.000% identity (100.000% similar) in 123 aa overlap (1-123:20-142) 10 20 30 40 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALFVFCGLL ::::::::::::::::::::::::::::::::::::::::: FLJ000 FKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALFVFCGLL 10 20 30 40 50 60 50 60 70 80 90 100 FLJ001 TCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 TCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPA 70 80 90 100 110 120 110 120 FLJ001 SATETTQLTADSHPSYHTDGFN :::::::::::::::::::::: FLJ000 SATETTQLTADSHPSYHTDGFN 130 140 >>KIAA0046 ( 872 res) ha00519s1 (872 aa) initn: 95 init1: 95 opt: 112 Z-score: 130.6 bits: 32.4 E(): 0.045 Smith-Waterman score: 112; 35.417% identity (56.250% similar) in 48 aa overlap (46-93:12-55) 20 30 40 50 60 70 FLJ001 GEENVNTYFVLSSWWAKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYV :::: :: :::. . ..:: : : . KIAA00 RRKMAGCRGSLCCCCRWCC---CCGERETRTPE-ELTILGE 10 20 30 80 90 100 110 120 FLJ001 SPEDLEAQLQSDEREATDTPIVIQPASATETTQLTADSHPSYHTDGFN . :. . : . :. : KIAA00 TQEEEDEILPRKDYESLDYDRCINDPYLEVLETMDNKKGRRYEAVKWMVVFAIGVCTGLV 40 50 60 70 80 90 >>KIAA1400 ( 1093 res) hk08136 (1093 aa) initn: 99 init1: 99 opt: 104 Z-score: 120.5 bits: 30.9 E(): 0.16 Smith-Waterman score: 104; 40.000% identity (53.333% similar) in 30 aa overlap (32-60:797-826) 10 20 30 40 50 60 FLJ001 DKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALFVF-CGLLTCCYCCCCLCCCFNCCCGK : : .. : :: :::: . :::. KIAA14 LTLILIIALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCGGGGSTCCGR 770 780 790 800 810 820 70 80 90 100 110 120 FLJ001 CKPKAPEGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPASATETTQLTADSHPSYHTD KIAA14 QARARKKKLSKSDIMLVQSSNVPSNPAQVPIEESGGFGSHHHNQNYCYQVCLTPESAKTD 830 840 850 860 870 880 >>KIAA0773 ( 336 res) hk05140 (336 aa) initn: 78 init1: 78 opt: 86 Z-score: 105.1 bits: 26.4 E(): 1.2 Smith-Waterman score: 86; 31.034% identity (53.448% similar) in 58 aa overlap (64-121:184-240) 40 50 60 70 80 90 FLJ001 LFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDEREATD .:: . ::: . . .:: ::.: KIAA07 DMSVNSTQEPLGCNYSDNYQELMDSQDALAQAPMDGWPHSYVS-QGMYCLGSSDAWEASD 160 170 180 190 200 210 100 110 120 FLJ001 TPIVIQPASATETTQLTADSHPSYHTDGFN .. .::... ::.:: : : KIAA07 QSLIASPATGSYLGPAFDDSQPSLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDL 220 230 240 250 260 270 >>KIAA1399 ( 452 res) hk07377 (452 aa) initn: 98 init1: 66 opt: 84 Z-score: 101.5 bits: 26.1 E(): 1.9 Smith-Waterman score: 84; 38.095% identity (57.143% similar) in 42 aa overlap (26-67:36-72) 10 20 30 40 50 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALFVFCGLLTCCYCCCCLCCCFN ::. .. :. .:::: .::: :. KIAA13 KQTPPTTQIHCGPPKPVLSPSFKTPATPLGLSTSTGHMLMPLCGLLWWWWCCCSGWYCY- 10 20 30 40 50 60 60 70 80 90 100 110 FLJ001 CCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPASATETTQLTADSHP : : : ::. KIAA13 ---GLCAP-APQMLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQPPGLAANNT 70 80 90 100 110 120 >>KIAA0501 ( 122 res) hg00500 (122 aa) initn: 94 init1: 67 opt: 76 Z-score: 98.0 bits: 23.6 E(): 2.9 Smith-Waterman score: 76; 66.667% identity (66.667% similar) in 12 aa overlap (43-54:104-114) 20 30 40 50 60 70 FLJ001 EQFGEENVNTYFVLSSWWAKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETE ::: : : :: : KIAA05 LDLAYIAANFIPFDLILPIFSAPGNQYSALCCYLCIC-CCIFWFFIMFFF 80 90 100 110 120 80 90 100 110 120 FLJ001 FYVSPEDLEAQLQSDEREATDTPIVIQPASATETTQLTADSHPSYHTDGFN >>KIAA0149 ( 830 res) ha01221 (830 aa) initn: 118 init1: 68 opt: 81 Z-score: 95.6 bits: 25.9 E(): 4 Smith-Waterman score: 81; 37.143% identity (65.714% similar) in 35 aa overlap (14-48:413-445) 10 20 30 40 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALFVFCGLLTC : : . .: ....: . :..: :: .: KIAA01 ASCPAGFHGNNCSVPCECPEGLCHPVSGSCQPGSGSRDTALIVGSL-VPLLLLFLGL-AC 390 400 410 420 430 440 50 60 70 80 90 100 FLJ001 CYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPASA : ::: KIAA01 CACCCWAPRSDLKDRPARDGATVSRMKLQVWGTLTSLGSTLPCRSLSSHKLPWVTVSHHD 450 460 470 480 490 500 >>KIAA1147 ( 451 res) pf02131 (451 aa) initn: 65 init1: 65 opt: 76 Z-score: 92.5 bits: 24.5 E(): 5.9 Smith-Waterman score: 76; 36.842% identity (50.000% similar) in 38 aa overlap (45-82:271-304) 20 30 40 50 60 70 FLJ001 FGEENVNTYFVLSSWWAKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFY :::::: : ::.. :: KIAA11 QILILWKFALLRKRILIFSPPPVGVVCYRVYCCCCLA---NVSLPGIGGTIPESKPF-FY 250 260 270 280 290 80 90 100 110 120 FLJ001 VSPEDLEAQLQSDEREATDTPIVIQPASATETTQLTADSHPSYHTDGFN :. :.:. KIAA11 VNVADIESLEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREK 300 310 320 330 340 350 >>FLJ00048 ( 146 res) as00048 (146 aa) initn: 83 init1: 59 opt: 68 Z-score: 88.2 bits: 22.0 E(): 10 Smith-Waterman score: 68; 61.538% identity (69.231% similar) in 13 aa overlap (51-63:46-57) 30 40 50 60 70 80 FLJ001 NTYFVLSSWWAKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDL :::: : :. :: FLJ000 LLSMFPKKARHPGAPALGICTRQPKSTPGTCCCFPCSPGR-KPSGLSLLLRTPEAAPRGQ 20 30 40 50 60 70 90 100 110 120 FLJ001 EAQLQSDEREATDTPIVIQPASATETTQLTADSHPSYHTDGFN FLJ000 RLEDVHHRPECRPPESPGPREKTNVGEAVGSEPRTVSRRYLNSLKNKLSSEAWRKSCQPV 80 90 100 110 120 130 >>KIAA0896 ( 2820 res) hk08890s2 (2820 aa) initn: 147 init1: 55 opt: 78 Z-score: 87.0 bits: 26.1 E(): 12 Smith-Waterman score: 78; 46.429% identity (50.000% similar) in 28 aa overlap (38-64:1221-1246) 10 20 30 40 50 60 FLJ001 GLYVAEQFGEENVNTYFVLSSWWAKALFVFCGLLTCCYCCCCLCCCFNCCCGK-CKPKAP :::: ::: : : :. :: : KIAA08 PLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESL--CCCTECARVCHKGHDCKLKRT 1200 1210 1220 1230 1240 70 80 90 100 110 120 FLJ001 EGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPASATETTQLTADSHPSYHTDGFN KIAA08 SPTAYCDCWEKCKCKTLIAGQKSARLDLLYRLLTATNLVTLPNSRGEHLLLFLVQTVARQ 1250 1260 1270 1280 1290 1300 123 residues in 1 query sequences 2210871 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:35:53 2009 done: Fri Feb 27 10:35:54 2009 Total Scan time: 0.310 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]