# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00118.fasta.nr -Q ../query/FLJ00118.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00118, 123 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7823587 sequences Expectation_n fit: rho(ln(x))= 4.4930+/-0.000183; mu= 8.4098+/- 0.010 mean_var=63.8397+/-12.114, 0's: 39 Z-trim: 45 B-trim: 0 in 0/67 Lambda= 0.160520 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|10440536|dbj|BAB15798.1| FLJ00118 protein [Homo ( 123) 905 217.3 4.4e-55 gi|50950001|emb|CAH10594.1| hypothetical protein [ ( 137) 905 217.4 4.8e-55 gi|18676430|dbj|BAB84867.1| FLJ00095 protein [Homo ( 142) 905 217.4 4.9e-55 gi|15213953|sp|Q9H3Z4.1|DNJC5_HUMAN RecName: Full= ( 198) 905 217.5 6.2e-55 gi|12643505|sp|Q29455.1|DNJC5_BOVIN RecName: Full= ( 198) 899 216.1 1.6e-54 gi|46397406|sp|P60905.1|DNJC5_RAT RecName: Full=Dn ( 198) 896 215.5 2.6e-54 gi|1095322|prf||2108343A Cys string protein ( 198) 896 215.5 2.6e-54 gi|15126683|gb|AAH12268.1| Dnajc5 protein [Mus mus ( 204) 890 214.1 7.1e-54 gi|149636002|ref|XP_001509762.1| PREDICTED: simila ( 198) 855 206.0 1.9e-51 gi|50758813|ref|XP_417428.1| PREDICTED: similar to ( 198) 852 205.3 3.1e-51 gi|126302679|ref|XP_001367644.1| PREDICTED: simila ( 198) 850 204.8 4.3e-51 gi|73992446|ref|XP_543107.2| PREDICTED: similar to ( 198) 837 201.8 3.4e-50 gi|116284094|gb|AAI23911.1| LOC548742 protein [Xen ( 197) 792 191.4 4.7e-47 gi|9910641|sp|O42196.1|CSP_XENLA RecName: Full=Cys ( 197) 784 189.5 1.7e-46 gi|10334819|gb|AAG16752.1|AF305092_1 cysteine-stri ( 101) 753 182.1 1.5e-44 gi|2494161|sp|P56101.1|CSP_TORCA RecName: Full=Cys ( 195) 751 181.9 3.4e-44 gi|182889518|gb|AAI65285.1| Dnajc5 protein [Danio ( 202) 724 175.6 2.6e-42 gi|49903108|gb|AAH76354.1| DnaJ (Hsp40) homolog, s ( 202) 724 175.6 2.6e-42 gi|47229161|emb|CAG03913.1| unnamed protein produc ( 199) 711 172.6 2.1e-41 gi|125851910|ref|XP_001338363.1| PREDICTED: simila ( 199) 701 170.3 1e-40 gi|109091286|ref|XP_001083905.1| PREDICTED: DnaJ ( ( 218) 686 166.9 1.2e-39 gi|193785943|dbj|BAG54730.1| unnamed protein produ ( 167) 684 166.3 1.4e-39 gi|114683081|ref|XP_001151225.1| PREDICTED: simila ( 277) 686 167.0 1.5e-39 gi|1232165|emb|CAA63355.1| cysteine string protein ( 167) 683 166.1 1.7e-39 gi|148675478|gb|EDL07425.1| DnaJ (Hsp40) homolog, ( 167) 675 164.2 6e-39 gi|68423883|ref|XP_700383.1| PREDICTED: DnaJ (Hsp4 ( 193) 647 157.8 5.9e-37 gi|89271319|emb|CAJ82820.1| DnaJ (Hsp40) homolog, ( 199) 642 156.6 1.4e-36 gi|149411178|ref|XP_001511979.1| PREDICTED: hypoth ( 455) 621 152.1 7.2e-35 gi|73992448|ref|XP_867684.1| PREDICTED: similar to ( 167) 616 150.5 7.7e-35 gi|109086570|ref|XP_001093963.1| PREDICTED: DnaJ ( ( 199) 606 148.3 4.4e-34 gi|221219258|gb|ACM08290.1| DnaJ homolog subfamily ( 194) 604 147.8 5.9e-34 gi|114620333|ref|XP_001160434.1| PREDICTED: simila ( 177) 603 147.6 6.5e-34 gi|114620335|ref|XP_001160490.1| PREDICTED: DnaJ ( ( 199) 603 147.6 7.1e-34 gi|73999445|ref|XP_852490.1| PREDICTED: similar to ( 199) 602 147.4 8.3e-34 gi|194214868|ref|XP_001495047.2| PREDICTED: simila ( 199) 601 147.1 9.8e-34 gi|20141445|sp|Q9UF47.2|DNJ5B_HUMAN RecName: Full= ( 199) 599 146.7 1.3e-33 gi|20137941|sp|Q9CQ94.1|DNJ5B_MOUSE RecName: Full= ( 199) 598 146.4 1.6e-33 gi|149048524|gb|EDM01065.1| similar to DnaJ homolo ( 199) 597 146.2 1.9e-33 gi|194036675|ref|XP_001928895.1| PREDICTED: simila ( 199) 597 146.2 1.9e-33 gi|29436583|gb|AAH49579.1| DnaJ (Hsp40) homolog, s ( 199) 595 145.7 2.6e-33 gi|118087026|ref|XP_425918.2| PREDICTED: similar t ( 143) 583 142.8 1.4e-32 gi|122136042|sp|Q2KIJ8.1|DNJ5B_BOVIN RecName: Full ( 199) 580 142.3 2.8e-32 gi|51703524|gb|AAH81115.1| Unknown (protein for MG ( 87) 545 133.8 4.3e-30 gi|126321320|ref|XP_001379131.1| PREDICTED: hypoth ( 218) 547 134.7 6.1e-30 gi|123234573|emb|CAM21505.1| DnaJ (Hsp40) homolog, ( 141) 527 129.9 1.1e-28 gi|210101977|gb|EEA50034.1| hypothetical protein B ( 204) 501 124.0 9.3e-27 gi|47206857|emb|CAF93065.1| unnamed protein produc ( 91) 490 121.1 3e-26 gi|91084337|ref|XP_972793.1| PREDICTED: similar to ( 237) 478 118.7 4.2e-25 gi|29436544|gb|AAH49534.1| Zgc:56703 [Danio rerio] ( 199) 473 117.5 8.2e-25 gi|47208911|emb|CAF93115.1| unnamed protein produc ( 191) 458 114.0 8.8e-24 >>gi|10440536|dbj|BAB15798.1| FLJ00118 protein [Homo sap (123 aa) initn: 905 init1: 905 opt: 905 Z-score: 1145.1 bits: 217.3 E(): 4.4e-55 Smith-Waterman score: 905; 100.000% identity (100.000% similar) in 123 aa overlap (1-123:1-123) 10 20 30 40 50 60 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALFVFCGLLTCCYCCCCLCCCFNCCCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 YDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALFVFCGLLTCCYCCCCLCCCFNCCCGK 10 20 30 40 50 60 70 80 90 100 110 120 FLJ001 CKPKAPEGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPASATETTQLTADSHPSYHTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 CKPKAPEGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPASATETTQLTADSHPSYHTD 70 80 90 100 110 120 FLJ001 GFN ::: gi|104 GFN >>gi|50950001|emb|CAH10594.1| hypothetical protein [Homo (137 aa) initn: 905 init1: 905 opt: 905 Z-score: 1144.5 bits: 217.4 E(): 4.8e-55 Smith-Waterman score: 905; 100.000% identity (100.000% similar) in 123 aa overlap (1-123:15-137) 10 20 30 40 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALFVFCGLLTCCYC :::::::::::::::::::::::::::::::::::::::::::::: gi|509 NAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALFVFCGLLTCCYC 10 20 30 40 50 60 50 60 70 80 90 100 FLJ001 CCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPASATET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|509 CCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPASATET 70 80 90 100 110 120 110 120 FLJ001 TQLTADSHPSYHTDGFN ::::::::::::::::: gi|509 TQLTADSHPSYHTDGFN 130 >>gi|18676430|dbj|BAB84867.1| FLJ00095 protein [Homo sap (142 aa) initn: 905 init1: 905 opt: 905 Z-score: 1144.3 bits: 217.4 E(): 4.9e-55 Smith-Waterman score: 905; 100.000% identity (100.000% similar) in 123 aa overlap (1-123:20-142) 10 20 30 40 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALFVFCGLL ::::::::::::::::::::::::::::::::::::::::: gi|186 FKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWWAKALFVFCGLL 10 20 30 40 50 60 50 60 70 80 90 100 FLJ001 TCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 TCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDEREATDTPIVIQPA 70 80 90 100 110 120 110 120 FLJ001 SATETTQLTADSHPSYHTDGFN :::::::::::::::::::::: gi|186 SATETTQLTADSHPSYHTDGFN 130 140 >>gi|15213953|sp|Q9H3Z4.1|DNJC5_HUMAN RecName: Full=DnaJ (198 aa) initn: 905 init1: 905 opt: 905 Z-score: 1142.4 bits: 217.5 E(): 6.2e-55 Smith-Waterman score: 905; 100.000% identity (100.000% similar) in 123 aa overlap (1-123:76-198) 10 20 30 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWW :::::::::::::::::::::::::::::: gi|152 KNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWW 50 60 70 80 90 100 40 50 60 70 80 90 FLJ001 AKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 AKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE 110 120 130 140 150 160 100 110 120 FLJ001 ATDTPIVIQPASATETTQLTADSHPSYHTDGFN ::::::::::::::::::::::::::::::::: gi|152 ATDTPIVIQPASATETTQLTADSHPSYHTDGFN 170 180 190 >>gi|12643505|sp|Q29455.1|DNJC5_BOVIN RecName: Full=DnaJ (198 aa) initn: 899 init1: 899 opt: 899 Z-score: 1134.9 bits: 216.1 E(): 1.6e-54 Smith-Waterman score: 899; 98.374% identity (100.000% similar) in 123 aa overlap (1-123:76-198) 10 20 30 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWW :::::::::::::::::::::::::::::: gi|126 KNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWW 50 60 70 80 90 100 40 50 60 70 80 90 FLJ001 AKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 AKALFIFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE 110 120 130 140 150 160 100 110 120 FLJ001 ATDTPIVIQPASATETTQLTADSHPSYHTDGFN :.::::::::::::::::::::::::::::::: gi|126 AADTPIVIQPASATETTQLTADSHPSYHTDGFN 170 180 190 >>gi|46397406|sp|P60905.1|DNJC5_RAT RecName: Full=DnaJ h (198 aa) initn: 896 init1: 896 opt: 896 Z-score: 1131.1 bits: 215.5 E(): 2.6e-54 Smith-Waterman score: 896; 99.187% identity (99.187% similar) in 123 aa overlap (1-123:76-198) 10 20 30 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWW :::::::::::::::::::::::::::::: gi|463 KNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWW 50 60 70 80 90 100 40 50 60 70 80 90 FLJ001 AKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|463 AKALFVVCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE 110 120 130 140 150 160 100 110 120 FLJ001 ATDTPIVIQPASATETTQLTADSHPSYHTDGFN ::::::::::::::::::::::::::::::::: gi|463 ATDTPIVIQPASATETTQLTADSHPSYHTDGFN 170 180 190 >>gi|1095322|prf||2108343A Cys string protein (198 aa) initn: 896 init1: 896 opt: 896 Z-score: 1131.1 bits: 215.5 E(): 2.6e-54 Smith-Waterman score: 896; 99.187% identity (99.187% similar) in 123 aa overlap (1-123:76-198) 10 20 30 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWW :::::::::::::::::::::::::::::: gi|109 KNPDNPEGEDKFKEINNGHATLKDGTKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWW 50 60 70 80 90 100 40 50 60 70 80 90 FLJ001 AKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AKALFVVCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE 110 120 130 140 150 160 100 110 120 FLJ001 ATDTPIVIQPASATETTQLTADSHPSYHTDGFN ::::::::::::::::::::::::::::::::: gi|109 ATDTPIVIQPASATETTQLTADSHPSYHTDGFN 170 180 190 >>gi|15126683|gb|AAH12268.1| Dnajc5 protein [Mus musculu (204 aa) initn: 1053 init1: 890 opt: 890 Z-score: 1123.5 bits: 214.1 E(): 7.1e-54 Smith-Waterman score: 890; 98.374% identity (99.187% similar) in 123 aa overlap (1-123:76-198) 10 20 30 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWW :::::::::::::::::::::::::::::: gi|151 KNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWW 50 60 70 80 90 100 40 50 60 70 80 90 FLJ001 AKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 AKALFVVCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE 110 120 130 140 150 160 100 110 120 FLJ001 ATDTPIVIQPASATETTQLTADSHPSYHTDGFN ::::::::::::::::::::::::::::::::. gi|151 ATDTPIVIQPASATETTQLTADSHPSYHTDGFSKIQERL 170 180 190 200 >>gi|149636002|ref|XP_001509762.1| PREDICTED: similar to (198 aa) initn: 855 init1: 855 opt: 855 Z-score: 1079.8 bits: 206.0 E(): 1.9e-51 Smith-Waterman score: 855; 92.683% identity (97.561% similar) in 123 aa overlap (1-123:76-198) 10 20 30 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWW :::::::::::::::::::::::::::::: gi|149 KNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWW 50 60 70 80 90 100 40 50 60 70 80 90 FLJ001 AKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE ::::::::::.: ::::::::::::::::::::: :::.. :.:::::::::::::::.: gi|149 AKALFVFCGLITGCYCCCCLCCCFNCCCGKCKPKPPEGDDQEYYVSPEDLEAQLQSDEKE 110 120 130 140 150 160 100 110 120 FLJ001 ATDTPIVIQPASATETTQLTADSHPSYHTDGFN :.::::::::::::::::::::::::::::::: gi|149 ASDTPIVIQPASATETTQLTADSHPSYHTDGFN 170 180 190 >>gi|50758813|ref|XP_417428.1| PREDICTED: similar to DNA (198 aa) initn: 852 init1: 852 opt: 852 Z-score: 1076.1 bits: 205.3 E(): 3.1e-51 Smith-Waterman score: 852; 93.496% identity (96.748% similar) in 123 aa overlap (1-123:76-198) 10 20 30 FLJ001 YDKYGSLGLYVAEQFGEENVNTYFVLSSWW :::::::::::::::::::::::::::::: gi|507 KNPDNPEAAEKFKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVLSSWW 50 60 70 80 90 100 40 50 60 70 80 90 FLJ001 AKALFVFCGLLTCCYCCCCLCCCFNCCCGKCKPKAPEGEETEFYVSPEDLEAQLQSDERE ::::::::::.: :::::::::: :::::::::: ::::: :.::::::::::::::::: gi|507 AKALFVFCGLITGCYCCCCLCCCCNCCCGKCKPKPPEGEEQEYYVSPEDLEAQLQSDERE 110 120 130 140 150 160 100 110 120 FLJ001 ATDTPIVIQPASATETTQLTADSHPSYHTDGFN :.:.::::::::::::::::::::::::::::: gi|507 ASDAPIVIQPASATETTQLTADSHPSYHTDGFN 170 180 190 123 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Sat Feb 28 00:44:57 2009 done: Sat Feb 28 00:48:44 2009 Total Scan time: 533.050 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]