# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sf00014.fasta.huge -Q ../query/FLJ00345.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00345, 339 aa vs ./tmplib.10216 library 2210655 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.6107+/-0.00487; mu= 18.8282+/- 0.330 mean_var=132.5037+/-28.446, 0's: 0 Z-trim: 0 B-trim: 0 in 0/40 Lambda= 0.111419 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1357 ( 836 res) fj01906 ( 836) 113 29.1 1.2 KIAA0394 ( 417 res) hf00236 ( 417) 104 27.2 2.3 KIAA1856 ( 1134 res) fh03203 (1134) 106 28.2 3.1 KIAA1453 ( 1123 res) fh14729 (1123) 105 28.0 3.4 FLJ00307 ( 452 res) sh05777 ( 452) 93 25.4 8.2 FLJ00153 ( 497 res) sh06127 ( 497) 93 25.5 8.6 FLJ00280 ( 440 res) sh01728 ( 440) 91 25.1 10 FLJ00287 ( 186 res) sh02562 ( 186) 87 23.9 10 KIAA1519 ( 648 res) fh13905s1 ( 648) 92 25.5 11 FLJ00103 ( 678 res) as00103 ( 678) 89 25.1 16 KIAA1863 ( 452 res) fj07583 ( 452) 87 24.5 16 KIAA0490 ( 135 res) hh00727 ( 135) 80 22.5 19 KIAA1817 ( 997 res) fj14474 ( 997) 88 25.2 22 FLJ00273 ( 144 res) sh00368 ( 144) 79 22.4 22 KIAA0054 ( 1943 res) ha00503s1 (1943) 90 26.0 24 KIAA1539 ( 543 res) fg02356 ( 543) 84 24.1 24 KIAA0043 ( 731 res) ha01331 ( 731) 85 24.5 26 KIAA0744 ( 619 res) hk04110 ( 619) 84 24.2 26 KIAA1695 ( 1199 res) fj11471 (1199) 87 25.2 26 FLJ00252 ( 819 res) sj09394 ( 819) 85 24.6 27 KIAA1802 ( 821 res) fj21631 ( 821) 85 24.6 27 FLJ00308 ( 233 res) sh05935 ( 233) 79 22.7 28 KIAA0807 ( 1329 res) hk04449(revised) (1329) 87 25.2 28 KIAA1200 ( 1403 res) fg02656 (1403) 87 25.3 29 KIAA0527 ( 768 res) hg02246 ( 768) 84 24.4 29 KIAA1652 ( 179 res) hg02500 ( 179) 77 22.2 30 KIAA1813 ( 673 res) ph00819b ( 673) 83 24.1 31 FLJ00279 ( 563 res) sh01691 ( 563) 82 23.8 31 FLJ00092 ( 369 res) as00092 ( 369) 80 23.2 31 KIAA0338 ( 934 res) hg01242 ( 934) 84 24.5 32 KIAA1312 ( 1471 res) fh11767 (1471) 86 25.2 33 KIAA1720 ( 421 res) pf00447 ( 421) 80 23.3 33 KIAA1114 ( 1458 res) fj15925 (1458) 85 25.0 36 FLJ00086 ( 399 res) as00086 ( 399) 79 23.1 36 FLJ00406 ( 261 res) sj08464 ( 261) 77 22.5 37 FLJ00248 ( 501 res) sj08681 ( 501) 80 23.4 37 KIAA1138 ( 1239 res) hj05928 (1239) 84 24.7 37 FLJ00392 ( 274 res) sj05126 ( 274) 77 22.5 37 KIAA1599 ( 608 res) fj09928 ( 608) 80 23.6 40 FLJ00219 ( 168 res) sj05764 ( 168) 74 21.7 41 KIAA1893 ( 800 res) fk04261 ( 800) 81 23.9 42 FLJ00007 ( 701 res) as00007 ( 701) 80 23.7 43 KIAA1811 ( 715 res) ha06731 ( 715) 80 23.7 44 KIAA1311 ( 889 res) fh11512 ( 889) 81 24.0 44 KIAA1273 ( 606 res) hk09394 ( 606) 79 23.4 45 KIAA0582 ( 760 res) fh15957 ( 760) 80 23.7 45 KIAA1477 ( 870 res) fj04927 ( 870) 80 23.8 48 FLJ00343 ( 2651 res) sf00012 (2651) 85 25.4 49 FLJ00014 ( 725 res) as00014 ( 725) 79 23.5 49 KIAA0833 ( 1734 res) hg01719s1 (1734) 83 24.8 49 >>KIAA1357 ( 836 res) fj01906 (836 aa) initn: 139 init1: 76 opt: 113 Z-score: 104.9 bits: 29.1 E(): 1.2 Smith-Waterman score: 113; 32.584% identity (44.944% similar) in 89 aa overlap (7-87:172-258) 10 20 30 FLJ003 AGSSWKCRGCSLPHLPPPPA---CALLLPWPRTWVF : . : ::::: :. : :.. :: KIAA13 EGSGTMKKLDPAVGSPPAPPPPPVPSPPFPCPADRSPFLPPPPPVTDCSQGSPLPHSPVF 150 160 170 180 190 200 40 50 60 70 80 FLJ003 PSPASGWRWLTRSRYPLTWSRTSTRSSMGMSL----VSGPLQG-LLPCRRDPRVCPGTPS : : . : : : . : ... : :: :: ::: . : . : : KIAA13 PPPPP--EALIPFCSPPDWCLSPPRPALSPILPDSPVSLPLPPPLLPSSEPPPAPPLDPK 210 220 230 240 250 90 100 110 120 130 140 FLJ003 SQRHLPVGEVVKQADVVLLGYPVPFSLSPDVRRKNLEIYEAVTSPQGPAMTWSMFAVGWM KIAA13 FMKDTRPPFTNSGQPESSRGSLRPPSTKEETSRPPMPLITTEALQMVQLRPVRKNSGAEA 260 270 280 290 300 310 >>KIAA0394 ( 417 res) hf00236 (417 aa) initn: 103 init1: 49 opt: 104 Z-score: 99.8 bits: 27.2 E(): 2.3 Smith-Waterman score: 104; 25.828% identity (43.046% similar) in 151 aa overlap (15-152:7-151) 10 20 30 40 50 FLJ003 AGSSWKCRGCSLPHLPPPP---ACALLLPWPRTWVFPSPASGWRWLTRSRYPLTWSRTST .:::: . ...:: : . :: . ... . :: : : KIAA03 DKKPGMVPPPPGEESQTVILP-PGWQSYLSPQGRRYYVNTTTNETTWERPS- 10 20 30 40 50 60 70 80 90 100 110 FLJ003 RSSMGMSLVSGPLQGLLPCRRDPRVCPGTPSSQRHLPVGEVVKQA-DVVLLGYPVPFSLS :: :. : .. :: . :::. . : :.. : :: : : KIAA03 -SSPGIPASPGSHRSSLPPTVNGYHASGTPAHPPETAHMSVRKSTGDSQNLGSSSP---S 60 70 80 90 100 120 130 140 150 160 FLJ003 PDVRRKNLEIYEAVTSPQGPAMT---------WSMFAVGWMELKDAVRARGLLDRSFANM ..: . :: :. .: ::. : . :: KIAA03 KKQSKENTITINCVTFPHPDTMPEQQLLKPTEWSYCDYFWADKKDPQGNGTVAGFELLLQ 110 120 130 140 150 160 170 180 190 200 210 220 FLJ003 AEPFKVWTENADGSGAVNFLTGMGGFLQAVVFGCTGFRVTRAGVTFDPVCLSGISRVSVS KIAA03 KQLKGKQMQKEMSEFIRERIKIEEDYAKNLAKLSQNSLASQEEGSLGEAWAQVKKSLADE 170 180 190 200 210 220 >>KIAA1856 ( 1134 res) fh03203 (1134 aa) initn: 89 init1: 89 opt: 106 Z-score: 97.6 bits: 28.2 E(): 3.1 Smith-Waterman score: 111; 33.333% identity (44.697% similar) in 132 aa overlap (13-140:992-1098) 10 20 30 40 FLJ003 AGSSWKCRGCSLPHLPPPPACALLLPWPRTWVFPSPASGWRW :: :::: ::: :.: ..:. : : KIAA18 PPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLPPPQTRTLPA-ARTMRQ 970 980 990 1000 1010 1020 50 60 70 80 90 100 FLJ003 LTRSRYPLTWSRTSTRSSMGMSLVSGPLQGLLPCRRDPRVCPGTPSSQRHLPVGEVVKQA : : : : : : :: :: : ::...:. : . . KIAA18 PPPPRLALPRRRRSP-----------PRPPSRPARRGPR--P-TPQARRR-P-----RPS 1030 1040 1050 1060 110 120 130 140 150 FLJ003 DVVLLGYPVPFSL-SPDVR---RKNLEIYEAVTSPQGPAMTWSMFAVGWMELKDAVRARG :: : :: :: .: : . . .: ::: : .: KIAA18 PRRLLRSP--HSLCSPRLRPGPRADPRRERASTSP--PPRSWPSGSACRPWRTGPRSPPS 1070 1080 1090 1100 1110 160 170 180 190 200 210 FLJ003 LLDRSFANMAEPFKVWTENADGSGAVNFLTGMGGFLQAVVFGCTGFRVTRAGVTFDPVCL KIAA18 CQPGSSGSGSASPPSGVA 1120 1130 >>KIAA1453 ( 1123 res) fh14729 (1123 aa) initn: 86 init1: 61 opt: 105 Z-score: 96.7 bits: 28.0 E(): 3.4 Smith-Waterman score: 105; 28.676% identity (47.794% similar) in 136 aa overlap (1-128:698-821) 10 20 30 FLJ003 AGSSWKCRGCSLPHLPPPPACALLLPWPRT :.. :. : .: ::::. . : : KIAA14 KSPVLSNTTTEPASTMSPPPAKKLALSAKKASTLWRATGNDL--RPPPPSPSSDLTHPMK 670 680 690 700 710 720 40 50 60 70 80 FLJ003 WVFPSPASGW---RWLTRSRYPLTWSRTSTRSSMGMSLVSGPLQGLLPCRRDPRVCPGTP : :: : : . : : . :: . : .:.:. . : .:: : . KIAA14 TSHPVVASTWPVHRARAVSPAPQSSSRLQPPFSPHPTLLSSTPKP--PGTSEPRSCSSIS 730 740 750 760 770 780 90 100 110 120 130 140 FLJ003 SSQRHLP-VGEVVKQADVVLLGYPVPFSL----SPDVRRKNLEIYEAVTSPQGPAMTWSM .. :: :.: :.: : . .: . ::. .::. . : KIAA14 TA---LPQVNE-----DLVSLPHQLPEASEPPRSPSEKRKKTFVGEPQRLGSETCLPQHI 790 800 810 820 830 150 160 170 180 190 200 FLJ003 FAVGWMELKDAVRARGLLDRSFANMAEPFKVWTENADGSGAVNFLTGMGGFLQAVVFGCT KIAA14 REATAAPHGKRKRKKKKRPEDTAASALQEGQTQRQPGSPMYRREGQAQLPAVRRQEDGTQ 840 850 860 870 880 890 >>FLJ00307 ( 452 res) sh05777 (452 aa) initn: 82 init1: 50 opt: 93 Z-score: 89.9 bits: 25.4 E(): 8.2 Smith-Waterman score: 93; 24.771% identity (53.211% similar) in 109 aa overlap (216-315:93-197) 190 200 210 220 230 240 FLJ003 FLTGMGGFLQAVVFGCTGFRVTRAGVTFDPVCLSGISRVSVSG-IFYQGN---KLNFSFS :: . :: .. .: .:. : . : FLJ003 KGAKNTDWEHKEKCCARCQQVLGFLLHRGAVCRGCSHRVCAQCRVFLRGTHAWKCTVCFE 70 80 90 100 110 120 250 260 270 280 290 300 FLJ003 EDSVTVEVTARAGPWAPHLEAELWPSQSRLSLLPGHKVSFPRSAGRIQMSPPKLPGSSSS . .: . ..: : . .:. .:. .. . :. .. .. ..:.. :: : : : FLJ003 DRNVKI----KTGEWFYEERAKKFPTGGKHETVGGQLLQSYQKLSKISVVPPTPPPVSES 130 140 150 160 170 310 320 330 FLJ003 EF---PGRTFS--DVRDPLQSPLWVTLGSSSPTESLTVDPASE . ::: : :. :: FLJ003 QCSRSPGRKVSAPDILKPLNQEDPKCSTNPILKQQNLPSSPAPSTIFSGGFRHGSLISID 180 190 200 210 220 230 >>FLJ00153 ( 497 res) sh06127 (497 aa) initn: 109 init1: 77 opt: 93 Z-score: 89.6 bits: 25.5 E(): 8.6 Smith-Waterman score: 93; 34.211% identity (51.316% similar) in 76 aa overlap (266-339:341-410) 240 250 260 270 280 290 FLJ003 LNFSFSEDSVTVEVTARAGPWAPHLEAELWPSQSRLSLLPGHKVSFPRSAGRIQMSPPKL ::. :. :: : ::: ::: FLJ001 RIRRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGSPPAS 320 330 340 350 360 370 300 310 320 330 FLJ003 PGSS--SSEFPGRTFSDVRDPLQSPLWVTLGSSSPTESLTVDPASE :: . :...: :. .: :. . :: :: : .. .:: FLJ001 PGPQGPSTKLPLSL--DLPSP--RPFALPLG--SPRIPLPAQQSSEACVIRVSIDNDHGN 380 390 400 410 420 FLJ001 LYRSILLTSQDKAPSVVRRALQKHNVPQPWACDYQLFQVLPGDRGWEEMLISAIKSVGTF 430 440 450 460 470 480 >>FLJ00280 ( 440 res) sh01728 (440 aa) initn: 110 init1: 51 opt: 91 Z-score: 88.3 bits: 25.1 E(): 10 Smith-Waterman score: 94; 29.167% identity (44.167% similar) in 120 aa overlap (15-120:70-187) 10 20 30 FLJ003 AGSSWKCRGCSLPHLPPP---PACALLLPWPRTWVFPS--PASG :::: :. :: ::: : :. : FLJ002 PPRTHSYLPGHSPLLGHTPTSRDTPPSRNTLPPPWMLPS-PRTLPSPRTLPSPRTLPTPG 40 50 60 70 80 90 40 50 60 70 80 90 FLJ003 WRWLTRSRYPLTWSRTSTRSSMGMSLVSGPLQGLLPCRRDPRVCPGTPSSQRHLP----- .. .. :: . . ... . :::: : :: : : :: FLJ002 THFYLPGHSPLLGHTSPSWDTLPPPGTHFPLQGHTSPSWDILPTPGMLPSPRTLPAPRTH 100 110 120 130 140 150 100 110 120 130 140 150 FLJ003 ---VGEVVKQADVVLLG-YPVPFSLSPDVRRKNLEIYEAVTSPQGPAMTWSMFAVGWMEL .:. . ::: ::.: . .: : FLJ002 SYFLGRSPFPGHSPLLGHYPLP-GHTPRYRDTPPSRDTPPSRDIPLSLDAPLSLDTPYSR 160 170 180 190 200 210 >>FLJ00287 ( 186 res) sh02562 (186 aa) initn: 88 init1: 53 opt: 87 Z-score: 88.3 bits: 23.9 E(): 10 Smith-Waterman score: 104; 23.669% identity (44.379% similar) in 169 aa overlap (13-174:12-175) 10 20 30 40 50 FLJ003 AGSSWKCRGCSLPHLPPPPACALLLPWPRTWVFP--SPASGWRWLTRSRYPLTWS--RTS : :: . ..:: : . : :. : : .. .:: : .: FLJ002 AGWQLLPTARSPAQHPPESTSVLLNWVIRALGPLVPPTEGGLWSNQVSWPL-WEDVKTP 10 20 30 40 50 60 70 80 90 100 110 FLJ003 TRSSMGMSLVSGPLQGLLP-CRRDPRVCPGTP--SSQRHLPVGEVVKQADVVLLGYPVPF . : : ..: : : :: . : :: . .:. ... . :. .:. FLJ002 EPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLA-WSCVLHSPLSLPL 60 70 80 90 100 110 120 130 140 150 160 170 FLJ003 SLSPDVRRKNLEIYEAVTSPQGPAMTWSMFAVGWMELKDAVRARGLLDRSFANMAEPFKV : : . . . . :. : :: ... : : : : :: . . .. FLJ002 SKLPPLYLTHSPLRHQSTQAQVPAP--HLYSQTW-EGDDMKTQTPLSRRSGVCRGADRRL 120 130 140 150 160 170 180 190 200 210 220 230 FLJ003 WTENADGSGAVNFLTGMGGFLQAVVFGCTGFRVTRAGVTFDPVCLSGISRVSVSGIFYQG : FLJ002 WKLQGLPAGGCM 180 >>KIAA1519 ( 648 res) fh13905s1 (648 aa) initn: 96 init1: 57 opt: 92 Z-score: 87.6 bits: 25.5 E(): 11 Smith-Waterman score: 106; 23.899% identity (49.057% similar) in 159 aa overlap (7-161:261-400) 10 20 30 FLJ003 AGSSWKCRGCSLPHLPPPPACALLLPW----PRTWV :::: : ..: :. : : :.. KIAA15 QESRHLLSPQLVQYQCGDSGKQGRETRRSSCRGCCLEKMPWSQLCGELPPLYGAEPEASR 240 250 260 270 280 290 40 50 60 70 80 90 FLJ003 FPSPASGWRWLTRSRYPLTWSRTSTRSSMGMSLVSGPLQGLLPCRRDPRVCPGTPSSQRH : : . . . .: . . .. ::. ..: . . : :: : : .:. KIAA15 APRPHTYF-----TPHPDSMDTEDSASSQKLDLSGEMVPGPLPA---PGKC-----RKRR 300 310 320 330 100 110 120 130 140 150 FLJ003 LPVGEVVKQADVVLLGYPVPFSLSPDVRRKNLEIYEAVTSPQGPAMTWSMFAVGWMELKD .:::. .: :: : . . .: ...: .. : .: ... . : .. KIAA15 MPVGRFQTFSDQEGLGCP-ERTHGSSVPKESLSRQDSSESRNGRTLSQPEAS----ETEE 340 350 360 370 380 390 160 170 180 190 200 210 FLJ003 AVRARGLLDRSFANMAEPFKVWTENADGSGAVNFLTGMGGFLQAVVFGCTGFRVTRAGVT :.::. : KIAA15 Q-RSRGVTDTREPSPGSHSALPGKKTALQAALLETLLDLVDRSWGGCRSLHSNEAFLAQA 400 410 420 430 440 450 >>FLJ00103 ( 678 res) as00103 (678 aa) initn: 58 init1: 58 opt: 89 Z-score: 84.8 bits: 25.1 E(): 16 Smith-Waterman score: 101; 24.675% identity (57.143% similar) in 154 aa overlap (169-319:32-170) 140 150 160 170 180 190 FLJ003 TWSMFAVGWMELKDAVRARGLLDRSFANMAEPFKVWTENADGSGAVNFLTGMGGFLQAVV .: :. ... : .:. ... . . .... FLJ001 GQCCEGAESTPESREMAPKTKKGCKVTLPEKPVKLASHTRDTTGVSQMFPSSKARTKSLL 10 20 30 40 50 60 200 210 220 230 240 250 FLJ003 FGCTGFRVTRAGVTFDPVCLSGISRVSVSGIFYQGNKLNFSFSEDSVTVEVTA-RAGPWA : : : ::. . .::::... .... . : :.. ... . . . : FLJ001 -GDDVFS-TMAGLEEADAEVSGISEADPQALLQAMKDL------DGMDADILGLKKSNSA 70 80 90 100 110 260 270 280 290 300 310 FLJ003 PHLEAELWPSQSRLSLLPGHKVSFPRSAGRIQMSPPKLPGSSSSEFPGRTFS--DVRDPL : .: :....: :.: :. :: . .::. ::: .: :: :..::: FLJ001 PSKKAAKDPGKGEL---PNH----PKPAGGAIPTKKSLPSPSSSGHQNRRFSSEDLEDPL 120 130 140 150 160 320 330 FLJ003 QSPLWVTLGSSSPTESLTVDPASE .. : FLJ001 RGLLSYDEGGITKQPPVTQSKTASDKSPSTVRDQGPSIPLTPGDTPIRKKEELLFDDGDD 170 180 190 200 210 220 339 residues in 1 query sequences 2210655 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:58:22 2009 done: Fri Feb 27 10:58:22 2009 Total Scan time: 0.470 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]