# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sf00014.fasta.huge -Q ../query/FLJ00345.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00345, 339 aa
vs ./tmplib.10216 library
2210655 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 4.6107+/-0.00487; mu= 18.8282+/- 0.330
mean_var=132.5037+/-28.446, 0's: 0 Z-trim: 0 B-trim: 0 in 0/40
Lambda= 0.111419
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
KIAA1357 ( 836 res) fj01906 ( 836) 113 29.1 1.2
KIAA0394 ( 417 res) hf00236 ( 417) 104 27.2 2.3
KIAA1856 ( 1134 res) fh03203 (1134) 106 28.2 3.1
KIAA1453 ( 1123 res) fh14729 (1123) 105 28.0 3.4
FLJ00307 ( 452 res) sh05777 ( 452) 93 25.4 8.2
FLJ00153 ( 497 res) sh06127 ( 497) 93 25.5 8.6
FLJ00280 ( 440 res) sh01728 ( 440) 91 25.1 10
FLJ00287 ( 186 res) sh02562 ( 186) 87 23.9 10
KIAA1519 ( 648 res) fh13905s1 ( 648) 92 25.5 11
FLJ00103 ( 678 res) as00103 ( 678) 89 25.1 16
KIAA1863 ( 452 res) fj07583 ( 452) 87 24.5 16
KIAA0490 ( 135 res) hh00727 ( 135) 80 22.5 19
KIAA1817 ( 997 res) fj14474 ( 997) 88 25.2 22
FLJ00273 ( 144 res) sh00368 ( 144) 79 22.4 22
KIAA0054 ( 1943 res) ha00503s1 (1943) 90 26.0 24
KIAA1539 ( 543 res) fg02356 ( 543) 84 24.1 24
KIAA0043 ( 731 res) ha01331 ( 731) 85 24.5 26
KIAA0744 ( 619 res) hk04110 ( 619) 84 24.2 26
KIAA1695 ( 1199 res) fj11471 (1199) 87 25.2 26
FLJ00252 ( 819 res) sj09394 ( 819) 85 24.6 27
KIAA1802 ( 821 res) fj21631 ( 821) 85 24.6 27
FLJ00308 ( 233 res) sh05935 ( 233) 79 22.7 28
KIAA0807 ( 1329 res) hk04449(revised) (1329) 87 25.2 28
KIAA1200 ( 1403 res) fg02656 (1403) 87 25.3 29
KIAA0527 ( 768 res) hg02246 ( 768) 84 24.4 29
KIAA1652 ( 179 res) hg02500 ( 179) 77 22.2 30
KIAA1813 ( 673 res) ph00819b ( 673) 83 24.1 31
FLJ00279 ( 563 res) sh01691 ( 563) 82 23.8 31
FLJ00092 ( 369 res) as00092 ( 369) 80 23.2 31
KIAA0338 ( 934 res) hg01242 ( 934) 84 24.5 32
KIAA1312 ( 1471 res) fh11767 (1471) 86 25.2 33
KIAA1720 ( 421 res) pf00447 ( 421) 80 23.3 33
KIAA1114 ( 1458 res) fj15925 (1458) 85 25.0 36
FLJ00086 ( 399 res) as00086 ( 399) 79 23.1 36
FLJ00406 ( 261 res) sj08464 ( 261) 77 22.5 37
FLJ00248 ( 501 res) sj08681 ( 501) 80 23.4 37
KIAA1138 ( 1239 res) hj05928 (1239) 84 24.7 37
FLJ00392 ( 274 res) sj05126 ( 274) 77 22.5 37
KIAA1599 ( 608 res) fj09928 ( 608) 80 23.6 40
FLJ00219 ( 168 res) sj05764 ( 168) 74 21.7 41
KIAA1893 ( 800 res) fk04261 ( 800) 81 23.9 42
FLJ00007 ( 701 res) as00007 ( 701) 80 23.7 43
KIAA1811 ( 715 res) ha06731 ( 715) 80 23.7 44
KIAA1311 ( 889 res) fh11512 ( 889) 81 24.0 44
KIAA1273 ( 606 res) hk09394 ( 606) 79 23.4 45
KIAA0582 ( 760 res) fh15957 ( 760) 80 23.7 45
KIAA1477 ( 870 res) fj04927 ( 870) 80 23.8 48
FLJ00343 ( 2651 res) sf00012 (2651) 85 25.4 49
FLJ00014 ( 725 res) as00014 ( 725) 79 23.5 49
KIAA0833 ( 1734 res) hg01719s1 (1734) 83 24.8 49
>>KIAA1357 ( 836 res) fj01906 (836 aa)
initn: 139 init1: 76 opt: 113 Z-score: 104.9 bits: 29.1 E(): 1.2
Smith-Waterman score: 113; 32.584% identity (44.944% similar) in 89 aa overlap (7-87:172-258)
10 20 30
FLJ003 AGSSWKCRGCSLPHLPPPPA---CALLLPWPRTWVF
: . : ::::: :. : :.. ::
KIAA13 EGSGTMKKLDPAVGSPPAPPPPPVPSPPFPCPADRSPFLPPPPPVTDCSQGSPLPHSPVF
150 160 170 180 190 200
40 50 60 70 80
FLJ003 PSPASGWRWLTRSRYPLTWSRTSTRSSMGMSL----VSGPLQG-LLPCRRDPRVCPGTPS
: : . : : : . : ... : :: :: ::: . : . : :
KIAA13 PPPPP--EALIPFCSPPDWCLSPPRPALSPILPDSPVSLPLPPPLLPSSEPPPAPPLDPK
210 220 230 240 250
90 100 110 120 130 140
FLJ003 SQRHLPVGEVVKQADVVLLGYPVPFSLSPDVRRKNLEIYEAVTSPQGPAMTWSMFAVGWM
KIAA13 FMKDTRPPFTNSGQPESSRGSLRPPSTKEETSRPPMPLITTEALQMVQLRPVRKNSGAEA
260 270 280 290 300 310
>>KIAA0394 ( 417 res) hf00236 (417 aa)
initn: 103 init1: 49 opt: 104 Z-score: 99.8 bits: 27.2 E(): 2.3
Smith-Waterman score: 104; 25.828% identity (43.046% similar) in 151 aa overlap (15-152:7-151)
10 20 30 40 50
FLJ003 AGSSWKCRGCSLPHLPPPP---ACALLLPWPRTWVFPSPASGWRWLTRSRYPLTWSRTST
.:::: . ...:: : . :: . ... . :: : :
KIAA03 DKKPGMVPPPPGEESQTVILP-PGWQSYLSPQGRRYYVNTTTNETTWERPS-
10 20 30 40 50
60 70 80 90 100 110
FLJ003 RSSMGMSLVSGPLQGLLPCRRDPRVCPGTPSSQRHLPVGEVVKQA-DVVLLGYPVPFSLS
:: :. : .. :: . :::. . : :.. : :: : :
KIAA03 -SSPGIPASPGSHRSSLPPTVNGYHASGTPAHPPETAHMSVRKSTGDSQNLGSSSP---S
60 70 80 90 100
120 130 140 150 160
FLJ003 PDVRRKNLEIYEAVTSPQGPAMT---------WSMFAVGWMELKDAVRARGLLDRSFANM
..: . :: :. .: ::. : . ::
KIAA03 KKQSKENTITINCVTFPHPDTMPEQQLLKPTEWSYCDYFWADKKDPQGNGTVAGFELLLQ
110 120 130 140 150 160
170 180 190 200 210 220
FLJ003 AEPFKVWTENADGSGAVNFLTGMGGFLQAVVFGCTGFRVTRAGVTFDPVCLSGISRVSVS
KIAA03 KQLKGKQMQKEMSEFIRERIKIEEDYAKNLAKLSQNSLASQEEGSLGEAWAQVKKSLADE
170 180 190 200 210 220
>>KIAA1856 ( 1134 res) fh03203 (1134 aa)
initn: 89 init1: 89 opt: 106 Z-score: 97.6 bits: 28.2 E(): 3.1
Smith-Waterman score: 111; 33.333% identity (44.697% similar) in 132 aa overlap (13-140:992-1098)
10 20 30 40
FLJ003 AGSSWKCRGCSLPHLPPPPACALLLPWPRTWVFPSPASGWRW
:: :::: ::: :.: ..:. : :
KIAA18 PPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLPPPQTRTLPA-ARTMRQ
970 980 990 1000 1010 1020
50 60 70 80 90 100
FLJ003 LTRSRYPLTWSRTSTRSSMGMSLVSGPLQGLLPCRRDPRVCPGTPSSQRHLPVGEVVKQA
: : : : : : :: :: : ::...:. : . .
KIAA18 PPPPRLALPRRRRSP-----------PRPPSRPARRGPR--P-TPQARRR-P-----RPS
1030 1040 1050 1060
110 120 130 140 150
FLJ003 DVVLLGYPVPFSL-SPDVR---RKNLEIYEAVTSPQGPAMTWSMFAVGWMELKDAVRARG
:: : :: :: .: : . . .: ::: : .:
KIAA18 PRRLLRSP--HSLCSPRLRPGPRADPRRERASTSP--PPRSWPSGSACRPWRTGPRSPPS
1070 1080 1090 1100 1110
160 170 180 190 200 210
FLJ003 LLDRSFANMAEPFKVWTENADGSGAVNFLTGMGGFLQAVVFGCTGFRVTRAGVTFDPVCL
KIAA18 CQPGSSGSGSASPPSGVA
1120 1130
>>KIAA1453 ( 1123 res) fh14729 (1123 aa)
initn: 86 init1: 61 opt: 105 Z-score: 96.7 bits: 28.0 E(): 3.4
Smith-Waterman score: 105; 28.676% identity (47.794% similar) in 136 aa overlap (1-128:698-821)
10 20 30
FLJ003 AGSSWKCRGCSLPHLPPPPACALLLPWPRT
:.. :. : .: ::::. . : :
KIAA14 KSPVLSNTTTEPASTMSPPPAKKLALSAKKASTLWRATGNDL--RPPPPSPSSDLTHPMK
670 680 690 700 710 720
40 50 60 70 80
FLJ003 WVFPSPASGW---RWLTRSRYPLTWSRTSTRSSMGMSLVSGPLQGLLPCRRDPRVCPGTP
: :: : : . : : . :: . : .:.:. . : .:: : .
KIAA14 TSHPVVASTWPVHRARAVSPAPQSSSRLQPPFSPHPTLLSSTPKP--PGTSEPRSCSSIS
730 740 750 760 770 780
90 100 110 120 130 140
FLJ003 SSQRHLP-VGEVVKQADVVLLGYPVPFSL----SPDVRRKNLEIYEAVTSPQGPAMTWSM
.. :: :.: :.: : . .: . ::. .::. . :
KIAA14 TA---LPQVNE-----DLVSLPHQLPEASEPPRSPSEKRKKTFVGEPQRLGSETCLPQHI
790 800 810 820 830
150 160 170 180 190 200
FLJ003 FAVGWMELKDAVRARGLLDRSFANMAEPFKVWTENADGSGAVNFLTGMGGFLQAVVFGCT
KIAA14 REATAAPHGKRKRKKKKRPEDTAASALQEGQTQRQPGSPMYRREGQAQLPAVRRQEDGTQ
840 850 860 870 880 890
>>FLJ00307 ( 452 res) sh05777 (452 aa)
initn: 82 init1: 50 opt: 93 Z-score: 89.9 bits: 25.4 E(): 8.2
Smith-Waterman score: 93; 24.771% identity (53.211% similar) in 109 aa overlap (216-315:93-197)
190 200 210 220 230 240
FLJ003 FLTGMGGFLQAVVFGCTGFRVTRAGVTFDPVCLSGISRVSVSG-IFYQGN---KLNFSFS
:: . :: .. .: .:. : . :
FLJ003 KGAKNTDWEHKEKCCARCQQVLGFLLHRGAVCRGCSHRVCAQCRVFLRGTHAWKCTVCFE
70 80 90 100 110 120
250 260 270 280 290 300
FLJ003 EDSVTVEVTARAGPWAPHLEAELWPSQSRLSLLPGHKVSFPRSAGRIQMSPPKLPGSSSS
. .: . ..: : . .:. .:. .. . :. .. .. ..:.. :: : : :
FLJ003 DRNVKI----KTGEWFYEERAKKFPTGGKHETVGGQLLQSYQKLSKISVVPPTPPPVSES
130 140 150 160 170
310 320 330
FLJ003 EF---PGRTFS--DVRDPLQSPLWVTLGSSSPTESLTVDPASE
. ::: : :. ::
FLJ003 QCSRSPGRKVSAPDILKPLNQEDPKCSTNPILKQQNLPSSPAPSTIFSGGFRHGSLISID
180 190 200 210 220 230
>>FLJ00153 ( 497 res) sh06127 (497 aa)
initn: 109 init1: 77 opt: 93 Z-score: 89.6 bits: 25.5 E(): 8.6
Smith-Waterman score: 93; 34.211% identity (51.316% similar) in 76 aa overlap (266-339:341-410)
240 250 260 270 280 290
FLJ003 LNFSFSEDSVTVEVTARAGPWAPHLEAELWPSQSRLSLLPGHKVSFPRSAGRIQMSPPKL
::. :. :: : ::: :::
FLJ001 RIRRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGSPPAS
320 330 340 350 360 370
300 310 320 330
FLJ003 PGSS--SSEFPGRTFSDVRDPLQSPLWVTLGSSSPTESLTVDPASE
:: . :...: :. .: :. . :: :: : .. .::
FLJ001 PGPQGPSTKLPLSL--DLPSP--RPFALPLG--SPRIPLPAQQSSEACVIRVSIDNDHGN
380 390 400 410 420
FLJ001 LYRSILLTSQDKAPSVVRRALQKHNVPQPWACDYQLFQVLPGDRGWEEMLISAIKSVGTF
430 440 450 460 470 480
>>FLJ00280 ( 440 res) sh01728 (440 aa)
initn: 110 init1: 51 opt: 91 Z-score: 88.3 bits: 25.1 E(): 10
Smith-Waterman score: 94; 29.167% identity (44.167% similar) in 120 aa overlap (15-120:70-187)
10 20 30
FLJ003 AGSSWKCRGCSLPHLPPP---PACALLLPWPRTWVFPS--PASG
:::: :. :: ::: : :. :
FLJ002 PPRTHSYLPGHSPLLGHTPTSRDTPPSRNTLPPPWMLPS-PRTLPSPRTLPSPRTLPTPG
40 50 60 70 80 90
40 50 60 70 80 90
FLJ003 WRWLTRSRYPLTWSRTSTRSSMGMSLVSGPLQGLLPCRRDPRVCPGTPSSQRHLP-----
.. .. :: . . ... . :::: : :: : : ::
FLJ002 THFYLPGHSPLLGHTSPSWDTLPPPGTHFPLQGHTSPSWDILPTPGMLPSPRTLPAPRTH
100 110 120 130 140 150
100 110 120 130 140 150
FLJ003 ---VGEVVKQADVVLLG-YPVPFSLSPDVRRKNLEIYEAVTSPQGPAMTWSMFAVGWMEL
.:. . ::: ::.: . .: :
FLJ002 SYFLGRSPFPGHSPLLGHYPLP-GHTPRYRDTPPSRDTPPSRDIPLSLDAPLSLDTPYSR
160 170 180 190 200 210
>>FLJ00287 ( 186 res) sh02562 (186 aa)
initn: 88 init1: 53 opt: 87 Z-score: 88.3 bits: 23.9 E(): 10
Smith-Waterman score: 104; 23.669% identity (44.379% similar) in 169 aa overlap (13-174:12-175)
10 20 30 40 50
FLJ003 AGSSWKCRGCSLPHLPPPPACALLLPWPRTWVFP--SPASGWRWLTRSRYPLTWS--RTS
: :: . ..:: : . : :. : : .. .:: : .:
FLJ002 AGWQLLPTARSPAQHPPESTSVLLNWVIRALGPLVPPTEGGLWSNQVSWPL-WEDVKTP
10 20 30 40 50
60 70 80 90 100 110
FLJ003 TRSSMGMSLVSGPLQGLLP-CRRDPRVCPGTP--SSQRHLPVGEVVKQADVVLLGYPVPF
. : : ..: : : :: . : :: . .:. ... . :. .:.
FLJ002 EPGEPGSPLPASPHPPLQPPAFPDPPIRSPDPAVSSAHSFPAPRLA-WSCVLHSPLSLPL
60 70 80 90 100 110
120 130 140 150 160 170
FLJ003 SLSPDVRRKNLEIYEAVTSPQGPAMTWSMFAVGWMELKDAVRARGLLDRSFANMAEPFKV
: : . . . . :. : :: ... : : : : :: . . ..
FLJ002 SKLPPLYLTHSPLRHQSTQAQVPAP--HLYSQTW-EGDDMKTQTPLSRRSGVCRGADRRL
120 130 140 150 160 170
180 190 200 210 220 230
FLJ003 WTENADGSGAVNFLTGMGGFLQAVVFGCTGFRVTRAGVTFDPVCLSGISRVSVSGIFYQG
:
FLJ002 WKLQGLPAGGCM
180
>>KIAA1519 ( 648 res) fh13905s1 (648 aa)
initn: 96 init1: 57 opt: 92 Z-score: 87.6 bits: 25.5 E(): 11
Smith-Waterman score: 106; 23.899% identity (49.057% similar) in 159 aa overlap (7-161:261-400)
10 20 30
FLJ003 AGSSWKCRGCSLPHLPPPPACALLLPW----PRTWV
:::: : ..: :. : : :..
KIAA15 QESRHLLSPQLVQYQCGDSGKQGRETRRSSCRGCCLEKMPWSQLCGELPPLYGAEPEASR
240 250 260 270 280 290
40 50 60 70 80 90
FLJ003 FPSPASGWRWLTRSRYPLTWSRTSTRSSMGMSLVSGPLQGLLPCRRDPRVCPGTPSSQRH
: : . . . .: . . .. ::. ..: . . : :: : : .:.
KIAA15 APRPHTYF-----TPHPDSMDTEDSASSQKLDLSGEMVPGPLPA---PGKC-----RKRR
300 310 320 330
100 110 120 130 140 150
FLJ003 LPVGEVVKQADVVLLGYPVPFSLSPDVRRKNLEIYEAVTSPQGPAMTWSMFAVGWMELKD
.:::. .: :: : . . .: ...: .. : .: ... . : ..
KIAA15 MPVGRFQTFSDQEGLGCP-ERTHGSSVPKESLSRQDSSESRNGRTLSQPEAS----ETEE
340 350 360 370 380 390
160 170 180 190 200 210
FLJ003 AVRARGLLDRSFANMAEPFKVWTENADGSGAVNFLTGMGGFLQAVVFGCTGFRVTRAGVT
:.::. :
KIAA15 Q-RSRGVTDTREPSPGSHSALPGKKTALQAALLETLLDLVDRSWGGCRSLHSNEAFLAQA
400 410 420 430 440 450
>>FLJ00103 ( 678 res) as00103 (678 aa)
initn: 58 init1: 58 opt: 89 Z-score: 84.8 bits: 25.1 E(): 16
Smith-Waterman score: 101; 24.675% identity (57.143% similar) in 154 aa overlap (169-319:32-170)
140 150 160 170 180 190
FLJ003 TWSMFAVGWMELKDAVRARGLLDRSFANMAEPFKVWTENADGSGAVNFLTGMGGFLQAVV
.: :. ... : .:. ... . . ....
FLJ001 GQCCEGAESTPESREMAPKTKKGCKVTLPEKPVKLASHTRDTTGVSQMFPSSKARTKSLL
10 20 30 40 50 60
200 210 220 230 240 250
FLJ003 FGCTGFRVTRAGVTFDPVCLSGISRVSVSGIFYQGNKLNFSFSEDSVTVEVTA-RAGPWA
: : : ::. . .::::... .... . : :.. ... . . . :
FLJ001 -GDDVFS-TMAGLEEADAEVSGISEADPQALLQAMKDL------DGMDADILGLKKSNSA
70 80 90 100 110
260 270 280 290 300 310
FLJ003 PHLEAELWPSQSRLSLLPGHKVSFPRSAGRIQMSPPKLPGSSSSEFPGRTFS--DVRDPL
: .: :....: :.: :. :: . .::. ::: .: :: :..:::
FLJ001 PSKKAAKDPGKGEL---PNH----PKPAGGAIPTKKSLPSPSSSGHQNRRFSSEDLEDPL
120 130 140 150 160
320 330
FLJ003 QSPLWVTLGSSSPTESLTVDPASE
.. :
FLJ001 RGLLSYDEGGITKQPPVTQSKTASDKSPSTVRDQGPSIPLTPGDTPIRKKEELLFDDGDD
170 180 190 200 210 220
339 residues in 1 query sequences
2210655 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 10:58:22 2009 done: Fri Feb 27 10:58:22 2009
Total Scan time: 0.470 Total Display time: 0.050
Function used was FASTA [version 34.26.5 April 26, 2007]