# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh00874.fasta.huge -Q ../query/FLJ00124.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00124, 118 aa vs ./tmplib.10216 library 2210876 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.5259+/-0.00369; mu= 9.1195+/- 0.249 mean_var=77.3467+/-16.470, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.145832 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1565 ( 1313 res) bf00184 (1313) 93 28.9 0.77 KIAA1495 ( 502 res) fj08986 ( 502) 82 26.1 2 KIAA0467 ( 2687 res) ff08895 (2687) 86 27.8 3.4 KIAA1735 ( 493 res) ph00512 ( 493) 78 25.2 3.6 KIAA0113 ( 636 res) ha01652s1 ( 636) 79 25.6 3.7 FLJ00052 ( 368 res) as00052 ( 368) 74 24.3 5.3 KIAA0858 ( 1557 res) hh02535 (1557) 77 25.6 8.9 KIAA0919 ( 710 res) hh02580 ( 710) 73 24.4 9.5 KIAA0139 ( 1388 res) ha04032 (1388) 76 25.3 9.5 KIAA0567 ( 978 res) hh02110 ( 978) 74 24.7 10 KIAA0078 ( 635 res) ha01237 ( 635) 72 24.1 10 KIAA1696 ( 635 res) fj12768 ( 635) 72 24.1 10 KIAA0487 ( 234 res) fk08362 ( 234) 67 22.6 11 KIAA0661 ( 1030 res) hk01952 (1030) 73 24.6 12 KIAA0699 ( 847 res) hg00621(revised) ( 847) 72 24.3 12 KIAA1143 ( 116 res) hj00512 ( 116) 63 21.4 12 KIAA1155 ( 145 res) hh04176 ( 145) 64 21.7 12 KIAA0290 ( 906 res) ha06644 ( 906) 72 24.3 13 KIAA0434 ( 1571 res) hh02165 (1571) 73 24.8 16 KIAA0018 ( 553 res) hk07284 ( 553) 68 23.2 17 KIAA1641 ( 718 res) fj10609s1 ( 718) 69 23.5 17 KIAA1594 ( 931 res) fj09468 ( 931) 69 23.7 20 KIAA1512 ( 2010 res) fg04660y1 (2010) 72 24.7 22 KIAA1598 ( 446 res) fj09914 ( 446) 65 22.5 22 KIAA1275 ( 1140 res) hk10413 (1140) 69 23.8 23 KIAA1052 ( 1456 res) hh04964 (1456) 70 24.1 24 KIAA0268 ( 1193 res) ha07061 (1193) 69 23.8 24 FLJ00088 ( 925 res) as00088 ( 925) 67 23.2 27 KIAA0976 ( 386 res) hj06950 ( 386) 63 22.0 27 KIAA0462 ( 2276 res) hg00891 (2276) 71 24.5 27 KIAA0359 ( 760 res) hh00048 ( 760) 66 22.9 27 KIAA0559 ( 1212 res) hh01510 (1212) 68 23.6 28 KIAA0662 ( 1114 res) hk01953s1 (1114) 67 23.3 30 KIAA0568 ( 1426 res) hh02280 (1426) 68 23.7 31 KIAA1721 ( 1150 res) pf00531 (1150) 67 23.3 31 FLJ00158 ( 308 res) sh06588 ( 308) 61 21.4 31 KIAA0841 ( 641 res) hk04975 ( 641) 64 22.4 33 KIAA0847 ( 645 res) hk05395 ( 645) 64 22.4 33 KIAA0532 ( 1637 res) hg03377 (1637) 68 23.7 34 KIAA1951 ( 679 res) fj05532 ( 679) 64 22.5 34 KIAA1997 ( 1685 res) bj00195y1 (1685) 68 23.7 34 KIAA1105 ( 730 res) hh02687(revised) ( 730) 64 22.5 36 KIAA0939 ( 595 res) hh04825s1 ( 595) 63 22.2 36 KIAA1235 ( 1485 res) fh08704 (1485) 67 23.5 37 KIAA0695 ( 781 res) hk04006s1 ( 781) 64 22.5 37 KIAA1097 ( 980 res) hk07058 ( 980) 65 22.9 37 KIAA1270 ( 986 res) hk06471 ( 986) 65 22.9 37 KIAA1656 ( 136 res) fg00806 ( 136) 56 20.0 38 FLJ00211 ( 213 res) sj05061 ( 213) 58 20.6 38 KIAA0317 ( 826 res) hg00276 ( 826) 64 22.6 39 >>KIAA1565 ( 1313 res) bf00184 (1313 aa) initn: 87 init1: 65 opt: 93 Z-score: 108.4 bits: 28.9 E(): 0.77 Smith-Waterman score: 101; 28.571% identity (57.143% similar) in 105 aa overlap (1-84:454-558) 10 20 FLJ001 DHELRALDEN--QRLAKKKADLHDEEDE-- ...:: :::. .:.: : .:. :... KIAA15 LRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALKNELRKEREQIL 430 440 450 460 470 480 30 40 50 60 FLJ001 -----QDILLAQDLEDMW-EQKFLQFKLGARITE-----------ADEKNDRTSLNRKLD : . : :..: :..... .:. . : :.. . .:. ::. KIAA15 QQAGKQRLELEQEIEKAKTEENYIRDRLALSLKENSRLENELLENAEKLAEYENLTNKLQ 490 500 510 520 530 540 70 80 90 100 110 FLJ001 RNLVLLVREKFGDQDVWILPQAEWQPGETLRGTAERTLATLSGGFSAFL ::: .. ::::: : KIAA15 RNLENVLAEKFGDLDPSSAEFFLQEERLTQMRNEYERQCRVLQDQVDELQSELEEYRAQG 550 560 570 580 590 600 >>KIAA1495 ( 502 res) fj08986 (502 aa) initn: 51 init1: 51 opt: 82 Z-score: 100.9 bits: 26.1 E(): 2 Smith-Waterman score: 82; 25.000% identity (55.435% similar) in 92 aa overlap (14-100:178-269) 10 20 30 40 FLJ001 DHELRALDENQRLAKKKADLHDEED-EQDILLAQDLEDMWEQK ..:. .: ::. :.. :::.. .: .. KIAA14 TEDVAVPEQGNAHIGSFVSFFKGKEKCSEKSRKNEELGDEKRLEKEQLLAEEEDDDLKEV 150 160 170 180 190 200 50 60 70 80 90 FLJ001 FLQFKLGARITEADEKN----DRTSLNRKLDRNLVLLVREKFGDQDVWILPQAEWQPGET :..:.. . ..:: ::. :. .. : . .:. : ::: :. KIAA14 TDLRKIAAQLLQQEQKNRILNHSTSVMRNKPKQTVECEKSVSADEVNSPLSPLTWQPLEN 210 220 230 240 250 260 100 110 FLJ001 LRGTAERTLATLSGGFSAFL . KIAA14 QKDQIDEQPWPESHPIIWQSEERRRSKQIRKEYFKYKSMRKSSSGNENDEQDSDNANMST 270 280 290 300 310 320 >>KIAA0467 ( 2687 res) ff08895 (2687 aa) initn: 68 init1: 68 opt: 86 Z-score: 96.8 bits: 27.8 E(): 3.4 Smith-Waterman score: 86; 25.000% identity (58.036% similar) in 112 aa overlap (10-117:1222-1329) 10 20 30 FLJ001 DHELRALDENQRLAKKKADLHDEEDEQDILLAQDLEDMW :::: . :::: . ...:.:.. ::.: KIAA04 LIREDGGPGTECRHLQQLLVRRVGEICREVNQRLLLQ--DLHDSHVCNSLLVAESEEDLW 1200 1210 1220 1230 1240 40 50 60 70 80 90 FLJ001 EQKF-LQFKLGARITEADEKNDRTSLNRKLDRNLVLLVREKFGDQDVW---ILPQAEWQP ... .. . : . : :.. : . .: .:. . :: : ... . KIAA04 RSETPFHSRQRAPLPSDDYAADESCAPRGYLAATMQFVPGHFSCDVVWGTVIRVHSRLKM 1250 1260 1270 1280 1290 1300 100 110 FLJ001 GETLRGTAERTLATLSGGFSAFL : .. :.. :.. .: . ..:: KIAA04 GPSM-GVS-RAIQALRSVLNAFSVVNRKNMFVYQERATKAVYYLRLLETSCSDRPWKGDA 1310 1320 1330 1340 1350 1360 >>KIAA1735 ( 493 res) ph00512 (493 aa) initn: 93 init1: 66 opt: 78 Z-score: 96.4 bits: 25.2 E(): 3.6 Smith-Waterman score: 86; 28.704% identity (62.037% similar) in 108 aa overlap (5-100:155-256) 10 20 30 FLJ001 DHELRALDENQRLAKKKADLHDEEDEQDILLAQD ....::: : :: :. ... ... : KIAA17 PEDEQERPLALCEPGVNPEEQLIIIQSRLDQSMEENQDL--KKELLKCKQEARNL---QG 130 140 150 160 170 40 50 60 70 80 FLJ001 LEDMWEQKF-------LQFK---LGARITEADEKNDRTSLNRKLD-RNLVL-LVREKFGD ..: .:.. ::.: : : . . . .:. ..:.:::: :: .: ....:. KIAA17 IKDALQQRLTQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQ 180 190 200 210 220 230 90 100 110 FLJ001 QDVWILPQAEWQPGETLRGTAERTLATLSGGFSAFL .: .: : . . :.:: KIAA17 KDR-LLQQHQAKLEEALRKLSDVSYHQVDLERELEHKDVLLAHCMKREADEATNYNSHNS 240 250 260 270 280 290 >>KIAA0113 ( 636 res) ha01652s1 (636 aa) initn: 48 init1: 48 opt: 79 Z-score: 96.2 bits: 25.6 E(): 3.7 Smith-Waterman score: 79; 31.081% identity (62.162% similar) in 74 aa overlap (1-72:357-427) 10 20 30 FLJ001 DHELRALDENQRLAKKKADLHDEEDEQDIL ... : .:.. :::.: .... . :: : KIAA01 MKQQYEQKITELRQKLADLQKQVTDLEAEREQKQRDFDRKLLLAKSKIEMEETDKEQ--L 330 340 350 360 370 380 40 50 60 70 80 FLJ001 LAQDLEDMWEQKFLQFKLG--ARITEADEKNDRTSLNRKLDRNLVLLVREKFGDQDVWIL :. : . :.:: .:. .: : .:: . ::. :.. : KIAA01 TAEAKELRQKVKYLQDQLSPLTRQREYQEK-EIQRLNKALEEALSIQTPPSSPPTAFGSP 390 400 410 420 430 440 90 100 110 FLJ001 PQAEWQPGETLRGTAERTLATLSGGFSAFL KIAA01 EGAGALLRKQELVTQNELLKQQVKIFEEDFQRERSDRERMNEEKEELKKQVEKLQAQVTL 450 460 470 480 490 500 >>FLJ00052 ( 368 res) as00052 (368 aa) initn: 49 init1: 49 opt: 74 Z-score: 93.4 bits: 24.3 E(): 5.3 Smith-Waterman score: 74; 29.167% identity (68.750% similar) in 48 aa overlap (1-47:67-114) 10 20 30 FLJ001 DHELRALDENQRLAKKKADLHDEEDEQDIL :.::.. ....: . . . .: :: .. FLJ000 VRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTEDASETD 40 50 60 70 80 90 40 50 60 70 80 FLJ001 LAQ-DLEDMWEQKFLQFKLGARITEADEKNDRTSLNRKLDRNLVLLVREKFGDQDVWILP ::. : ::. :.: ... FLJ000 LAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELF 100 110 120 130 140 150 >>KIAA0858 ( 1557 res) hh02535 (1557 aa) initn: 41 init1: 41 opt: 77 Z-score: 89.4 bits: 25.6 E(): 8.9 Smith-Waterman score: 79; 21.552% identity (56.034% similar) in 116 aa overlap (1-109:1198-1311) 10 20 FLJ001 DHE-LRALDENQRLAKKKADLHDEEDE--Q :.: :: .:..: .... .:... . : KIAA08 VLSSNSMSLTTREPSLATWEATWSEGSKSSDREGTRAGEEERRQPQEEV-VHEDQGKKPQ 1170 1180 1190 1200 1210 1220 30 40 50 60 70 80 FLJ001 DILLAQDLEDMWEQKFLQFKLGARITEADEKNDRTSLNRK----LDRNLVLLVREKFGDQ : :. . : :::.. . . :. :.. : . ..: ..:. . . . KIAA08 DQLVIER-ERKWEQQLQEEQEQKRLQAEAEEQKRPAEEQKRQAEIERETSVRIYQYRRPV 1230 1240 1250 1260 1270 1280 90 100 110 FLJ001 DVWILPQAEWQPGETLRGTAERTLATLSGGFSAFL : . .:..: . : : ... .: KIAA08 DSYDIPKTEEASSGFLPGDRNKSRSTTELDDYSTNKNGNNKYLDQIGNMTSSQRRSKKEQ 1290 1300 1310 1320 1330 1340 >>KIAA0919 ( 710 res) hh02580 (710 aa) initn: 69 init1: 69 opt: 73 Z-score: 88.8 bits: 24.4 E(): 9.5 Smith-Waterman score: 73; 28.571% identity (60.000% similar) in 70 aa overlap (1-66:293-362) 10 20 30 FLJ001 DHELRALDENQRLAKKKADLHDEEDEQDIL : :... . ... . :..::::.... KIAA09 QQQRNLDNIVLQQPRIGSKRKSKKDAYIIFDTEIESTSPKSEQDSGILDVEDEEDDEEVP 270 280 290 300 310 320 40 50 60 70 80 FLJ001 LAQDLED---MWEQKFLQFKLGARIT-EADEKNDRTSLNRKLDRNLVLLVREKFGDQDVW :::: : ... . :::: : : ...: . : KIAA09 GAQDLVDFSPVYRCLHIYSVLGARETFENYYRKQRRKQARLVLQPPSNMHETLDGYRKYF 330 340 350 360 370 380 90 100 110 FLJ001 ILPQAEWQPGETLRGTAERTLATLSGGFSAFL KIAA09 NQIVGFFVVEDHILHTTQGLVNRAYIDELWEMALSKTIAALRTHSSYCSDPNLVLDLKNL 390 400 410 420 430 440 >>KIAA0139 ( 1388 res) ha04032 (1388 aa) initn: 70 init1: 44 opt: 76 Z-score: 88.8 bits: 25.3 E(): 9.5 Smith-Waterman score: 82; 25.510% identity (59.184% similar) in 98 aa overlap (14-107:658-750) 10 20 30 40 FLJ001 DHELRALDENQRLAKKKADLHD-EEDEQDILLAQDLEDMWEQK : : :..: :: . :...:...:.. ..: KIAA01 ERILQEHEQIKKKTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEK 630 640 650 660 670 680 50 60 70 80 90 FLJ001 FLQFKLGARITEADEKNDRTSLNRKLDR-NLVLLVRE--KFGDQDVWILPQAEWQPGETL .: :. . ..: : ..:.. :. . : .. :.:.: : : . :. KIAA01 ---KELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRIKDMDLW--EQQEEERITTM 690 700 710 720 730 740 100 110 FLJ001 RGTAERTLATLSGGFSAFL . :..: KIAA01 QLEREKALEHKNRMSRMLEDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRLEERKR 750 760 770 780 790 800 >>KIAA0567 ( 978 res) hh02110 (978 aa) initn: 55 init1: 55 opt: 74 Z-score: 88.3 bits: 24.7 E(): 10 Smith-Waterman score: 74; 36.000% identity (58.000% similar) in 50 aa overlap (4-53:603-647) 10 20 30 FLJ001 DHELRALDENQRLAKKKADLHDEEDEQDILLAQ :: ::.:. . : : .. :: : :.: KIAA05 MVRESVEQQADSFKATRFNLETEWKNNYPRLRELDRNELFEKAKNEILDEV----ISLSQ 580 590 600 610 620 40 50 60 70 80 90 FLJ001 DLEDMWEQKFLQFKLGARITEADEKNDRTSLNRKLDRNLVLLVREKFGDQDVWILPQAEW ::. .:: .: :.. KIAA05 VTPKHWEE-ILQQSLWERVSTHVIENIYLPAAQTMNSGTFNTTVDIKLKQWTDKQLPNKA 630 640 650 660 670 680 118 residues in 1 query sequences 2210876 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:38:24 2009 done: Fri Feb 27 10:38:24 2009 Total Scan time: 0.300 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]