# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh01178.fasta.huge -Q ../query/FLJ00125.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00125, 156 aa vs ./tmplib.10216 library 2210838 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 7.6214+/-0.00631; mu= -0.7498+/- 0.424 mean_var=267.1282+/-60.590, 0's: 0 Z-trim: 0 B-trim: 0 in 0/40 Lambda= 0.078472 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1733 ( 509 res) ph00321 ( 509) 134 27.0 1.5 FLJ00052 ( 368 res) as00052 ( 368) 122 25.4 3.1 KIAA0666 ( 1085 res) hk02075 (1085) 130 27.0 3.2 KIAA0551 ( 1385 res) hh00867s1 (1385) 131 27.2 3.4 KIAA0389 ( 1296 res) hj00061 (1296) 130 27.1 3.5 KIAA0562 ( 931 res) hh01779 ( 931) 123 26.1 5 KIAA1065 ( 665 res) hj05094 ( 665) 118 25.3 6 KIAA0640 ( 603 res) hj03440 ( 603) 116 25.0 6.7 KIAA0741 ( 1222 res) hk04024 (1222) 121 26.0 6.9 FLJ00198 ( 677 res) sj03504 ( 677) 115 25.0 7.7 FLJ00279 ( 563 res) sh01691 ( 563) 113 24.7 8.1 KIAA0989 ( 859 res) hk05377 ( 859) 115 25.1 8.9 KIAA1256 ( 1676 res) hh15293 (1676) 120 26.1 9 KIAA0531 ( 999 res) hg03072 ( 999) 115 25.2 9.7 FLJ00354 ( 1041 res) sh02128 (1041) 115 25.3 10 KIAA1187 ( 813 res) fk03027 ( 813) 113 24.9 10 KIAA1922 ( 370 res) fh11169 ( 370) 107 23.7 10 KIAA0105 ( 192 res) ha00682 ( 192) 102 22.8 10 KIAA1641 ( 718 res) fj10609s1 ( 718) 111 24.6 11 KIAA2012 ( 555 res) ah04096 ( 555) 109 24.2 11 KIAA0314 ( 1899 res) af02425 (1899) 117 25.8 12 KIAA0687 ( 1175 res) hk02992 (1175) 113 25.1 13 KIAA1103 ( 453 res) hk10190 ( 453) 105 23.6 13 KIAA0642 ( 1329 res) hh02837 (1329) 112 25.1 15 KIAA1167 ( 834 res) hj01786(revised) ( 834) 108 24.3 15 KIAA0182 ( 1157 res) ha02329s1 (1157) 110 24.7 16 KIAA0846 ( 691 res) hk05386 ( 691) 106 24.0 16 KIAA1160 ( 351 res) hj01067 ( 351) 100 22.9 17 KIAA1524 ( 884 res) fj00637(revised) ( 884) 107 24.3 17 KIAA0291 ( 1024 res) fh25236 (1024) 108 24.4 17 KIAA0577 ( 1043 res) hj00291 (1043) 107 24.3 19 KIAA1937 ( 704 res) fk04595 ( 704) 104 23.8 19 KIAA0600 ( 1080 res) fh08981 (1080) 107 24.4 19 KIAA1345 ( 1532 res) fj00488 (1532) 109 24.8 20 KIAA0138 ( 962 res) ha03743 ( 962) 105 24.1 21 KIAA0775 ( 639 res) hk05255 ( 639) 101 23.4 22 KIAA0655 ( 1083 res) hk01768 (1083) 105 24.1 22 KIAA0807 ( 1329 res) hk04449(revised) (1329) 105 24.3 25 KIAA1048 ( 897 res) hh02560 ( 897) 102 23.7 25 KIAA0203 ( 1593 res) ha02320 (1593) 106 24.5 26 FLJ00267 ( 1110 res) sj04085 (1110) 103 23.9 26 KIAA0654 ( 1267 res) fh18335 (1267) 104 24.1 26 KIAA0136 ( 950 res) ha03621s1 ( 950) 101 23.6 28 KIAA0866 ( 1984 res) hk00546s1 (1984) 106 24.6 30 FLJ00316 ( 649 res) sh06964 ( 649) 97 22.9 31 KIAA1454 ( 1265 res) fh15916 (1265) 102 23.9 31 KIAA1407 ( 744 res) fh00894(revised) ( 744) 97 23.0 33 KIAA0670 ( 1286 res) hk02359s1 (1286) 101 23.8 34 KIAA0445 ( 1919 res) hg00102s1 (1919) 104 24.4 34 KIAA2001 ( 689 res) bj00176 ( 689) 96 22.9 34 >>KIAA1733 ( 509 res) ph00321 (509 aa) initn: 52 init1: 52 opt: 134 Z-score: 103.4 bits: 27.0 E(): 1.5 Smith-Waterman score: 134; 26.316% identity (57.237% similar) in 152 aa overlap (7-153:111-258) 10 20 30 FLJ001 ARSLRADIERVARENSDLQRQKLEAQQGLRASQEAK ..::.: :: .. : :. :. KIAA17 DRRPIRRVRSKSDTPYLAEARISFNLGAAEEVERLAAMRSDSLVPGTHTPPIRRRSKFAN 90 100 110 120 130 140 40 50 60 70 80 90 FLJ001 Q-KVEKEAQAREAKLQAECSRQTQLALEEKAVLRKERDNLAKELEEKKREAEQLRMELAI .. : . :. : .: ..:. :::.: .:. :..: :. :. .. .. .. KIAA17 LGRIFKPWKWRKKK--SEKFKHTSAALERKISMRQSREELIKRGVLKEIYDKDGELSISN 150 160 170 180 190 100 110 120 130 140 150 FLJ001 RNSALDTCIK-TKSQPMMPVSRPMGPVPNPQPIDPASLEEFK-RKILESQRP--PAGIPV ....:.. . ..:: .:. : ::: :. :: : : .. :... : :. .: KIAA17 EEDSLENGQSLSSSQLSLPALSEMEPVPMPR--DPCSYEVLQPSDIMDGPDPGAPVKLPC 200 210 220 230 240 250 FLJ001 APSSG : KIAA17 LPVKLSPPLPPKKVMICMPVGGPDLSLVSYTAQKSGQQGVAQHHHTVLPSQIQHQLQYGS 260 270 280 290 300 310 >>FLJ00052 ( 368 res) as00052 (368 aa) initn: 99 init1: 67 opt: 122 Z-score: 97.6 bits: 25.4 E(): 3.1 Smith-Waterman score: 136; 26.946% identity (54.491% similar) in 167 aa overlap (16-155:118-277) 10 20 30 40 FLJ001 ARSLRADIERVARENSDLQRQKLEAQQG-LRASQEAKQKVEKEAQ ..:.:: . :.: :. :. .:.... . FLJ000 DTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYK 90 100 110 120 130 140 50 60 70 80 90 FLJ001 AR----EAKLQAECSRQTQLALEEKAVLRKE--------RDNLAKELEEKKREAEQLRME : : :: : . . ..:: . :: ..:: ::::::. :. .. FLJ000 ERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLT 150 160 170 180 190 200 100 110 120 130 140 FLJ001 LAIRNSALDTCIKTKSQPMMPVS---RPMGPVPNP----QPIDPASLEEF--KRKILESQ . . ...... .:.: . :: ::: : .: ::.:. . ..:.:. FLJ000 MELTGDSMEV------KPIMTRKLRRRPNDPVPIPDKRRKPA-PAQLNYLLTDEQIMEDL 210 220 230 240 250 260 150 FLJ001 RPPAGI-----PVAPSSG : . :..::: FLJ000 RTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESK 270 280 290 300 310 320 >>KIAA0666 ( 1085 res) hk02075 (1085 aa) initn: 95 init1: 95 opt: 130 Z-score: 97.4 bits: 27.0 E(): 3.2 Smith-Waterman score: 130; 24.837% identity (49.673% similar) in 153 aa overlap (7-153:441-584) 10 20 30 FLJ001 ARSLRADIERVARENSDLQRQKLEAQQGLRASQEAK .. :. ....... : .:.. . .: . KIAA06 LLDRIIQQIVIQNDKGQDPDSTPLENFNIKNVVRMLVNENEVKQWKEQAEKMRKEHNELQ 420 430 440 450 460 470 40 50 60 70 80 90 FLJ001 QKVEKEAQAREAKLQAECSRQTQLALEEKAVLRKERDNLAKELEEKKREAEQLRMELAIR ::.::. . ::. .:: : .: : ...: :: :.:. .:. .:. . KIAA06 QKLEKK--------ERECDAKTQEKEEMMQTLNKMKEKLEKETTEHKQVKQQV-ADLTAQ 480 490 500 510 520 100 110 120 130 140 150 FLJ001 NSALDTCIKTKSQPMMPV-SRPMGPVPNPQP---IDPASLEEFKRKILESQRPP--AGIP :. : : : . : :: :. : . : . .: :: : : KIAA06 LHELSRRAVCASIPGGPSPGAPGGPFPSSVPGSLLPPPPPPPLPGGMLPPPPPPLPPGGP 530 540 550 560 570 580 FLJ001 VAPSSG : KIAA06 PPPPGPPPLGAIMPPPGAPMGLALKKKSIPQPTNALKSFNWSKLPENKLEGTVWTEIDDT 590 600 610 620 630 640 >>KIAA0551 ( 1385 res) hh00867s1 (1385 aa) initn: 141 init1: 100 opt: 131 Z-score: 96.9 bits: 27.2 E(): 3.4 Smith-Waterman score: 136; 28.767% identity (53.425% similar) in 146 aa overlap (3-144:374-509) 10 20 FLJ001 ARSLRADIERVARENSD----LQRQKLEAQQG .:: :. :. :.. :.::.:: :: KIAA05 TEYEYSGSEEEEEENDSGEPSSILNLPGESTLRRDFLRLQLANKERSEALRRQQLEQQQ- 350 360 370 380 390 400 30 40 50 60 70 80 FLJ001 LRASQEAKQKVEKEAQAREAKLQAECSRQTQLALEEKAVLRKERDNLAKELEEKKREAEQ : ..: :... : : : . : : :. . ... :::. .: :.... :: KIAA05 -RENEEHKRQLLAERQKR-IEEQKEQRRRLEEQQRREKELRKQ-----QEREQRRHYEEQ 410 420 430 440 450 90 100 110 120 130 140 FLJ001 LRMELAIRNSALDTCIKTKSQPMMPVSRPMGPVPNPQPIDPASLEEFKRKILESQRPPAG .: : : . . . . . .: . . . . : : :.::: :: :: KIAA05 MRREEERRRAEHEQ--EYIRRQLEEEQRQLEILQQQLLHEQALLLEYKRKQLEEQRQAER 460 470 480 490 500 510 150 FLJ001 IPVAPSSG KIAA05 LQRQLKQERDYLVSLQHQRQEQRPVEKKPLYHYKEGMSPSEKPAWAKEVEERSRLNRQSS 520 530 540 550 560 570 >>KIAA0389 ( 1296 res) hj00061 (1296 aa) initn: 140 init1: 115 opt: 130 Z-score: 96.6 bits: 27.1 E(): 3.5 Smith-Waterman score: 131; 24.161% identity (58.389% similar) in 149 aa overlap (9-156:947-1082) 10 20 30 FLJ001 ARSLRADIERVARENSDLQRQKLEAQQGLRASQEAKQK :: ::... .:.: : .. .. .:::.: KIAA03 SEELLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEKRRRKEEEERRMKLEMEAKRK 920 930 940 950 960 970 40 50 60 70 80 90 FLJ001 VEKEAQAREAKLQAECSRQTQLALEEKAVLRKERDNLAKELEEKKREAEQLRMELAIRNS :.: : : . . .. : .: . . .::... . . :..:. ..: ...: .. KIAA03 QEEE----ERKKREDDEKRIQAEVEAQLARQKEEESQQQAVLEQERRDRELALRIAQSEA 980 990 1000 1010 1020 1030 100 110 120 130 140 150 FLJ001 ALDTCIKTKSQPMMPVSRPMGPVPNPQPIDPASLEEFKRKILES-QRPPAGIPVAPSSG : :. ..: . . : : :. : :.. ... : .: :: . . ..: KIAA03 EL---ISDEAQADLALRRNDGTRPKMTP------EQMAKEMSEFLSRGPAVLATKAAAGT 1040 1050 1060 1070 1080 KIAA03 KKYDLSKWKYAELRDTINTSCDIELLAACREEFHRRLKVYHAWKSKNKKRNTETEQRAPK 1090 1100 1110 1120 1130 1140 >>KIAA0562 ( 931 res) hh01779 (931 aa) initn: 68 init1: 57 opt: 123 Z-score: 93.8 bits: 26.1 E(): 5 Smith-Waterman score: 123; 29.814% identity (53.416% similar) in 161 aa overlap (1-155:207-353) 10 20 30 FLJ001 ARSLRADIERVARENSDLQRQKLEAQQGLR : .. : : ::. :...: :: : : KIAA05 DHYLGHNSEDPALEGTYARKSDYISPLDDLAFDMYQDPE-VAQIIRKLDERKREAVQKER 180 190 200 210 220 230 40 50 60 70 80 90 FLJ001 ASQEAKQKVEKEAQAREAKLQAECSRQTQLALEEKAVLRKERDNLAKELEEKKREAEQLR . : : :: : :: : . .:.. ...:: .:::: ::.. :: : KIAA05 YDYAKKLK-----QAI-ADLQKVGERLGRYEVEKRCAVEKEDYDLAKE---KKQQMEQYR 240 250 260 270 280 100 110 120 130 140 FLJ001 MELAIR---NSALDTCIKTK--SQPMMPVSRPMGPV-PNPQPIDPASLEEFKRKILESQR :. . .: ::. . . . :..:..: .: .:.: :: ..... :.: KIAA05 AEVYEQLELHSLLDAELMRRPFDLPLQPLARSGSPCHQKPMP----SLPQLEERGTENQF 290 300 310 320 330 340 150 FLJ001 PPAGIPVAPSSG . ::: KIAA05 AEPFLQEKPSSYSLTISPQHSAVDPLLPATDPHPKINAESLPYDERPLPAIRKHYGEAVV 350 360 370 380 390 400 >>KIAA1065 ( 665 res) hj05094 (665 aa) initn: 65 init1: 65 opt: 118 Z-score: 92.3 bits: 25.3 E(): 6 Smith-Waterman score: 122; 26.846% identity (55.705% similar) in 149 aa overlap (12-155:261-398) 10 20 30 40 FLJ001 ARSLRADIERVARENSDLQRQKLEAQQGLRASQEAKQKVEK .: :.: .. : . ::.. .. .: . KIAA10 QHRTGAPLGQSEELQPLSQRHPFLPHLGLASRPNGDWSQPCLTCD---RAARATSPRVSS 240 250 260 270 280 50 60 70 80 90 100 FLJ001 EAQAREAKLQAECSRQTQLALEEKAVLRKERDNLAKELEEKKREAEQLRMELAIRNSALD : . . . ..: : :::: :. :. . : ::. :....::...:...: : KIAA10 ELEQARPQTSGEEELQLQLAL---AMSRE-----VAEQEERLRRGDDLRLQMALEESRRD 290 300 310 320 330 110 120 130 140 150 FLJ001 TCI--KTKSQPMMPVSRPMGPVPNPQPID-PASL--EEFKRKILESQRPPAGIPVAPSSG : : : . .: . . . . : . ::. : . . .: : : :.::.: KIAA10 TVKIPKKKEHGSLPQQTTLLDLMDALPSSGPAAQKAEPWGPSASTNQTNPWGGPAAPAST 340 350 360 370 380 390 KIAA10 SDPWPSFGTKPAASIDPWGVPTGATAQSVPKNSDPWAASQQPASSAGKRASDAWGAVSTT 400 410 420 430 440 450 >>KIAA0640 ( 603 res) hj03440 (603 aa) initn: 121 init1: 86 opt: 116 Z-score: 91.6 bits: 25.0 E(): 6.7 Smith-Waterman score: 116; 25.532% identity (67.021% similar) in 94 aa overlap (2-94:465-557) 10 20 30 FLJ001 ARSLRADI-ERVARENSDLQRQKLEAQQGLR :.:.: . :. . . ..:.. .:: ::... KIAA06 QRVRELEDMYLKLQEALEDERQARQDEETVRKLQARLLEEESSKRAELEKWHLEQQQAIQ 440 450 460 470 480 490 40 50 60 70 80 90 FLJ001 ASQEAKQKVEKEAQAREAKLQAECSRQTQLALEEKAVLRKERDNLAKELEEKKREAEQLR ... ::..:.. .: :: . .: ::.: .: .. ... :.:: .... . KIAA06 TTEAEKQELENQRVLKEQALQEAMEQLEELELERKQAL-EQYEEVKKKLEMATNKTKSWK 500 510 520 530 540 550 100 110 120 130 140 150 FLJ001 MELAIRNSALDTCIKTKSQPMMPVSRPMGPVPNPQPIDPASLEEFKRKILESQRPPAGIP ..: KIAA06 DKVAHHEGLIRLIEPGSKNPHLITNWGPAAFTEAELEEREKNWKEKKTTE 560 570 580 590 600 >>KIAA0741 ( 1222 res) hk04024 (1222 aa) initn: 164 init1: 74 opt: 121 Z-score: 91.3 bits: 26.0 E(): 6.9 Smith-Waterman score: 121; 24.638% identity (55.797% similar) in 138 aa overlap (13-143:327-459) 10 20 30 40 FLJ001 ARSLRADIERVARENSDLQRQKLEAQQGLRASQEAKQKVEKE .:... ...: .. ..: ::: :. :: KIAA07 SEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKL-KE 300 310 320 330 340 350 50 60 70 80 90 100 FLJ001 AQAREAKLQAECSRQTQLALEEKAVLRKERDNLAKELEEKKREAEQLRMELAIRNSALDT . :. . . : .. ::: . :::.. : .: .:.:.. :. : : ... : : KIAA07 EEERQKREEEERIKR----LEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLT 360 370 380 390 400 410 110 120 130 140 150 FLJ001 C----IKTKSQPMMPVSRPMG---PVPNPQPIDPASLEEFKRKILESQRPPAGIPVAPSS ..... . . . .: : . : :. ::: . .: KIAA07 KSQREARARAEATLKLLQAQGVEVPSKDSLPKKRPIYEDKKRKKIPQQLESKEVSESMEL 420 430 440 450 460 470 FLJ001 G KIAA07 CAAVEVMEQGVPEKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKE 480 490 500 510 520 530 >>FLJ00198 ( 677 res) sj03504 (677 aa) initn: 84 init1: 84 opt: 115 Z-score: 90.4 bits: 25.0 E(): 7.7 Smith-Waterman score: 115; 34.043% identity (61.702% similar) in 94 aa overlap (3-94:192-282) 10 20 30 FLJ001 ARSLRADIERVARENSDLQRQKLEAQ-QGLRA .:: .. .. :. : ..:::: . :.: FLJ001 QQKSEGALEVQVWEGPIPGESLASGVAEQEALREEVAQLRRKAEALG-DELEAQARKLEA 170 180 190 200 210 220 40 50 60 70 80 90 FLJ001 SQEAKQKVEKE-AQAREAKLQAECSRQTQLALEEKAVLRKERDNLAKELEEKKREAEQLR .. .. :: ::::.: .:: :... :.: ::. . ..::: ..: : : FLJ001 QNTEAARLSKELAQARRA--EAEAHREAEAQAWEQARLREAVEAAGQELESASQEREALV 230 240 250 260 270 100 110 120 130 140 150 FLJ001 MELAIRNSALDTCIKTKSQPMMPVSRPMGPVPNPQPIDPASLEEFKRKILESQRPPAGIP :: FLJ001 EALAAAGRERRQWEREGSRLRAQSEAAEERMQVLESEGRQHLEEAERERREKEALQAELE 280 290 300 310 320 330 156 residues in 1 query sequences 2210838 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:38:25 2009 done: Fri Feb 27 10:38:25 2009 Total Scan time: 0.340 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]