# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sh01540.fasta.nr -Q ../query/FLJ00277.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00277, 357 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7819223 sequences Expectation_n fit: rho(ln(x))= 6.7154+/-0.0002; mu= 3.9178+/- 0.011 mean_var=133.0747+/-25.936, 0's: 44 Z-trim: 56 B-trim: 32 in 1/66 Lambda= 0.111180 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|21748488|dbj|BAC03381.1| FLJ00277 protein [Homo ( 357) 2364 390.0 3.9e-106 gi|119589981|gb|EAW69575.1| chromosome 19 open rea ( 422) 2364 390.1 4.4e-106 gi|68565394|sp|Q4ZIN3.1|MBRL_HUMAN RecName: Full=M ( 620) 2364 390.2 5.9e-106 gi|73987369|ref|XP_533963.2| PREDICTED: similar to ( 628) 2056 340.8 4.4e-91 gi|194668550|ref|XP_001788619.1| PREDICTED: simila ( 680) 2050 339.9 9.2e-91 gi|73987371|ref|XP_868621.1| PREDICTED: similar to ( 660) 1639 274.0 6.3e-71 gi|3025447|gb|AAC12681.1| R32184_3 [Homo sapiens] ( 529) 1620 270.8 4.4e-70 gi|118103215|ref|XP_418222.2| PREDICTED: hypotheti ( 720) 1576 263.9 7.4e-68 gi|72679409|gb|AAI00298.1| ORF61 protein [Mus musc ( 352) 1564 261.7 1.6e-67 gi|13529560|gb|AAH05494.1| ORF61 protein [Mus musc ( 481) 1564 261.8 2.1e-67 gi|31127175|gb|AAH52787.1| ORF61 protein [Mus musc ( 487) 1564 261.8 2.1e-67 gi|68565513|sp|Q8CIV2.2|MBRL_MOUSE RecName: Full=M ( 574) 1564 261.9 2.4e-67 gi|149034621|gb|EDL89358.1| membralin, isoform CRA ( 524) 1563 261.7 2.5e-67 gi|72679380|gb|AAI00260.1| RGD1311136 protein [Rat ( 565) 1563 261.7 2.6e-67 gi|213972537|ref|NP_001094356.1| membralin [Rattus ( 574) 1563 261.7 2.6e-67 gi|25418535|gb|AAM34492.1| membralin splice varian ( 543) 1553 260.1 7.7e-67 gi|68437467|ref|XP_700127.1| PREDICTED: im:7154960 ( 676) 1456 244.6 4.4e-62 gi|126323673|ref|XP_001374475.1| PREDICTED: simila ( 653) 1448 243.3 1e-61 gi|51703880|gb|AAH81019.1| MGC81609 protein [Xenop ( 631) 1396 235.0 3.3e-59 gi|47938649|gb|AAH72201.1| MGC81115 protein [Xenop ( 605) 1391 234.1 5.6e-59 gi|111308964|gb|AAI21220.1| Hypothetical protein M ( 627) 1384 233.0 1.2e-58 gi|210125363|gb|EEA73055.1| hypothetical protein B ( 685) 1314 221.8 3.2e-55 gi|115692103|ref|XP_793244.2| PREDICTED: similar t ( 549) 1268 214.4 4.5e-53 gi|110762636|ref|XP_624234.2| PREDICTED: similar t ( 696) 1215 206.0 1.9e-50 gi|189239008|ref|XP_001814448.1| PREDICTED: simila ( 617) 1197 203.0 1.3e-49 gi|156546813|ref|XP_001606090.1| PREDICTED: hypoth ( 667) 1178 200.0 1.2e-48 gi|193676518|ref|XP_001944587.1| PREDICTED: simila ( 667) 1145 194.7 4.5e-47 gi|194145461|gb|EDW61857.1| GJ22283 [Drosophila vi ( 918) 1146 195.0 5.1e-47 gi|109126369|ref|XP_001106279.1| PREDICTED: simila ( 181) 1120 190.2 2.7e-46 gi|148699670|gb|EDL31617.1| open reading frame 61, ( 567) 1123 191.1 4.6e-46 gi|156203883|gb|EDO27783.1| predicted protein [Nem ( 219) 1114 189.3 6.2e-46 gi|25418567|gb|AAM34493.1| membralin splice varian ( 567) 1104 188.1 3.8e-45 gi|194178385|gb|EDW91996.1| GE11749 [Drosophila ya ( 968) 1095 186.8 1.5e-44 gi|193910376|gb|EDW09243.1| GI19149 [Drosophila mo ( 964) 1094 186.7 1.7e-44 gi|15291971|gb|AAK93254.1| LD33689p [Drosophila me ( 960) 1092 186.3 2.1e-44 gi|198137073|gb|EAL26348.2| GA21053 [Drosophila ps ( 974) 1091 186.2 2.4e-44 gi|194171642|gb|EDW86543.1| GK21204 [Drosophila wi ( 620) 1082 184.6 4.7e-44 gi|190658614|gb|EDV55827.1| GG20564 [Drosophila er ( 953) 1078 184.1 1e-43 gi|194193714|gb|EDX07290.1| GD11155 [Drosophila si ( 886) 1075 183.6 1.3e-43 gi|47210816|emb|CAF92869.1| unnamed protein produc ( 542) 1042 178.1 3.6e-42 gi|149443130|ref|XP_001521368.1| PREDICTED: simila ( 349) 1028 175.7 1.2e-41 gi|149034622|gb|EDL89359.1| membralin, isoform CRA ( 507) 1028 175.9 1.6e-41 gi|148699669|gb|EDL31616.1| open reading frame 61, ( 557) 1028 175.9 1.8e-41 gi|193788228|dbj|BAG53122.1| unnamed protein produ ( 420) 986 169.0 1.5e-39 gi|119589979|gb|EAW69573.1| chromosome 19 open rea ( 421) 981 168.2 2.7e-39 gi|190582297|gb|EDV22370.1| hypothetical protein T ( 455) 974 167.1 6.1e-39 gi|198434865|ref|XP_002126075.1| PREDICTED: simila ( 539) 952 163.7 8e-38 gi|198434863|ref|XP_002125973.1| PREDICTED: simila ( 679) 952 163.8 9.5e-38 gi|14286312|gb|AAH08957.1| Chromosome 19 open read ( 408) 926 159.4 1.2e-36 gi|149034620|gb|EDL89357.1| membralin, isoform CRA ( 357) 917 157.9 2.9e-36 >>gi|21748488|dbj|BAC03381.1| FLJ00277 protein [Homo sap (357 aa) initn: 2364 init1: 2364 opt: 2364 Z-score: 2061.7 bits: 390.0 E(): 3.9e-106 Smith-Waterman score: 2364; 100.000% identity (100.000% similar) in 357 aa overlap (1-357:1-357) 10 20 30 40 50 60 FLJ002 DILMSSVKGLAENEENKGFLRNVVSGEHYRFVSMWMARTSYLAAFAIMVIFTLSVSMLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 DILMSSVKGLAENEENKGFLRNVVSGEHYRFVSMWMARTSYLAAFAIMVIFTLSVSMLLR 10 20 30 40 50 60 70 80 90 100 110 120 FLJ002 YSHHQIFVFIVDLLQMLEMNMAIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 YSHHQIFVFIVDLLQMLEMNMAIAFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILI 70 80 90 100 110 120 130 140 150 160 170 180 FLJ002 VWLADQYDAICCHTSTSKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 VWLADQYDAICCHTSTSKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMI 130 140 150 160 170 180 190 200 210 220 230 240 FLJ002 YFFHHYELPAILQQVRIQEMLLQAPPLGPGTPTALPDDMNNNSGAPATAPDSAGQPPALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 YFFHHYELPAILQQVRIQEMLLQAPPLGPGTPTALPDDMNNNSGAPATAPDSAGQPPALG 190 200 210 220 230 240 250 260 270 280 290 300 FLJ002 PVSPGASGSPGPVAAAPSSLVAAAASVAAAAGGDLGWMAETAAIITDASFLSGLSASLLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 PVSPGASGSPGPVAAAPSSLVAAAASVAAAAGGDLGWMAETAAIITDASFLSGLSASLLE 250 260 270 280 290 300 310 320 330 340 350 FLJ002 RRPASPLGPAGGLPHAPQDSVPPSDSAASDTTPLGAAVGGPSPASMAPTEAPSEVGS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 RRPASPLGPAGGLPHAPQDSVPPSDSAASDTTPLGAAVGGPSPASMAPTEAPSEVGS 310 320 330 340 350 >>gi|119589981|gb|EAW69575.1| chromosome 19 open reading (422 aa) initn: 2364 init1: 2364 opt: 2364 Z-score: 2060.7 bits: 390.1 E(): 4.4e-106 Smith-Waterman score: 2364; 100.000% identity (100.000% similar) in 357 aa overlap (1-357:66-422) 10 20 30 FLJ002 DILMSSVKGLAENEENKGFLRNVVSGEHYR :::::::::::::::::::::::::::::: gi|119 LIHPPADPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYR 40 50 60 70 80 90 40 50 60 70 80 90 FLJ002 FVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL 100 110 120 130 140 150 100 110 120 130 140 150 FLJ002 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHF 160 170 180 190 200 210 160 170 180 190 200 210 FLJ002 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQVRIQEMLLQAPPLGPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQVRIQEMLLQAPPLGPG 220 230 240 250 260 270 220 230 240 250 260 270 FLJ002 TPTALPDDMNNNSGAPATAPDSAGQPPALGPVSPGASGSPGPVAAAPSSLVAAAASVAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TPTALPDDMNNNSGAPATAPDSAGQPPALGPVSPGASGSPGPVAAAPSSLVAAAASVAAA 280 290 300 310 320 330 280 290 300 310 320 330 FLJ002 AGGDLGWMAETAAIITDASFLSGLSASLLERRPASPLGPAGGLPHAPQDSVPPSDSAASD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AGGDLGWMAETAAIITDASFLSGLSASLLERRPASPLGPAGGLPHAPQDSVPPSDSAASD 340 350 360 370 380 390 340 350 FLJ002 TTPLGAAVGGPSPASMAPTEAPSEVGS ::::::::::::::::::::::::::: gi|119 TTPLGAAVGGPSPASMAPTEAPSEVGS 400 410 420 >>gi|68565394|sp|Q4ZIN3.1|MBRL_HUMAN RecName: Full=Membr (620 aa) initn: 2364 init1: 2364 opt: 2364 Z-score: 2058.4 bits: 390.2 E(): 5.9e-106 Smith-Waterman score: 2364; 100.000% identity (100.000% similar) in 357 aa overlap (1-357:264-620) 10 20 30 FLJ002 DILMSSVKGLAENEENKGFLRNVVSGEHYR :::::::::::::::::::::::::::::: gi|685 VMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYR 240 250 260 270 280 290 40 50 60 70 80 90 FLJ002 FVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 FVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL 300 310 320 330 340 350 100 110 120 130 140 150 FLJ002 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHF 360 370 380 390 400 410 160 170 180 190 200 210 FLJ002 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQVRIQEMLLQAPPLGPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQVRIQEMLLQAPPLGPG 420 430 440 450 460 470 220 230 240 250 260 270 FLJ002 TPTALPDDMNNNSGAPATAPDSAGQPPALGPVSPGASGSPGPVAAAPSSLVAAAASVAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 TPTALPDDMNNNSGAPATAPDSAGQPPALGPVSPGASGSPGPVAAAPSSLVAAAASVAAA 480 490 500 510 520 530 280 290 300 310 320 330 FLJ002 AGGDLGWMAETAAIITDASFLSGLSASLLERRPASPLGPAGGLPHAPQDSVPPSDSAASD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 AGGDLGWMAETAAIITDASFLSGLSASLLERRPASPLGPAGGLPHAPQDSVPPSDSAASD 540 550 560 570 580 590 340 350 FLJ002 TTPLGAAVGGPSPASMAPTEAPSEVGS ::::::::::::::::::::::::::: gi|685 TTPLGAAVGGPSPASMAPTEAPSEVGS 600 610 620 >>gi|73987369|ref|XP_533963.2| PREDICTED: similar to Mem (628 aa) initn: 2066 init1: 1970 opt: 2056 Z-score: 1791.4 bits: 340.8 E(): 4.4e-91 Smith-Waterman score: 2056; 85.714% identity (93.132% similar) in 364 aa overlap (1-357:265-628) 10 20 FLJ002 DILMSSVKGLAENEENKG-------FLRNV :::::::::::::::::: ::::: gi|739 VMVVTLDPSRDQCFGDRFSRLLLAEFLGYDDILMSSVKGLAENEENKGSAGPSTSFLRNV 240 250 260 270 280 290 30 40 50 60 70 80 FLJ002 VSGEHYRFVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAI ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|739 VSGEHYRFVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAI 300 310 320 330 340 350 90 100 110 120 130 140 FLJ002 AFPAAPLLTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLR :::::::::::::::: .:::::::::::: :::::.::::::::::::::.: :::::: gi|739 AFPAAPLLTVILALVGEDAIMSEFFNDTTTDFYIILLVWLADQYDAICCHTNTIKRHWLR 360 370 380 390 400 410 150 160 170 180 190 200 FLJ002 FFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQVRIQEMLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|739 FFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQIRIQEMLLQ 420 430 440 450 460 470 210 220 230 240 250 260 FLJ002 APPLGPGTPTALPDDMNNNSGAPATAPDSAGQPPALGPVSPGASGSPGPVAAAPSSLVAA .::::::.:::::::.:::.::::: :: ::::::::: ::..:.::::: :::::::: gi|739 TPPLGPGAPTALPDDLNNNGGAPATIPDPAGQPPALGPGLPGTGGGPGPVAEAPSSLVAA 480 490 500 510 520 530 270 280 290 300 310 320 FLJ002 AASVAAAAGGDLGWMAETAAIITDASFLSGLSASLLERRPASPLGPAGGLPHAPQDSVPP ::::::::.:::::::::::.::::::::::::::::::::.::.:.::::.:::::.: gi|739 AASVAAAASGDLGWMAETAAMITDASFLSGLSASLLERRPAGPLSPGGGLPRAPQDSAPS 540 550 560 570 580 590 330 340 350 FLJ002 SDSAASDTTPLGAAVGGPSPASMAPTEAPSEVGS :.: : ::. .:.:.::: : .:.. : :::: gi|739 SNSLAHDTALPAAGVSGPSSAPTTPVDPPPEVGS 600 610 620 >>gi|194668550|ref|XP_001788619.1| PREDICTED: similar to (680 aa) initn: 2050 init1: 2050 opt: 2050 Z-score: 1785.7 bits: 339.9 E(): 9.2e-91 Smith-Waterman score: 2050; 86.275% identity (94.958% similar) in 357 aa overlap (1-357:324-680) 10 20 30 FLJ002 DILMSSVKGLAENEENKGFLRNVVSGEHYR :::::::::::::::::::::::::::::: gi|194 VMVVTLDPTRDQCFGDRFSRLLLAEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYR 300 310 320 330 340 350 40 50 60 70 80 90 FLJ002 FVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|194 FVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL 360 370 380 390 400 410 100 110 120 130 140 150 FLJ002 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHF ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|194 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTNTSKRHWLRFFYLYHF 420 430 440 450 460 470 160 170 180 190 200 210 FLJ002 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQVRIQEMLLQAPPLGPG ::::::::::::::::::::::::::::::::::::::::::::.:.::::::.:::::: gi|194 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQIRVQEMLLQTPPLGPG 480 490 500 510 520 530 220 230 240 250 260 270 FLJ002 TPTALPDDMNNNSGAPATAPDSAGQPPALGPVSPGASGSPGPVAAAPSSLVAAAASVAAA ::::::::.:::.: : .::.:.: ::::: :::.:.:::.: ::::::::::::::: gi|194 TPTALPDDLNNNGGIPPITPDAASQSPALGPGLPGAGGGPGPMAEAPSSLVAAAASVAAA 540 550 560 570 580 590 280 290 300 310 320 330 FLJ002 AGGDLGWMAETAAIITDASFLSGLSASLLERRPASPLGPAGGLPHAPQDSVPPSDSAASD :.:::::::::::::::::::::::::::.:::.:::.:.::: .:::::.: :.: .:: gi|194 ASGDLGWMAETAAIITDASFLSGLSASLLDRRPGSPLSPSGGLLRAPQDSAPASNSPGSD 600 610 620 630 640 650 340 350 FLJ002 TTPLGAAVGGPSPASMAPTEAPSEVGS .. .. : :.:.: ...:::::: gi|194 AVSQTTGGGRPNPVSTDLVDTPSEVGS 660 670 680 >>gi|73987371|ref|XP_868621.1| PREDICTED: similar to Mem (660 aa) initn: 2052 init1: 1639 opt: 1639 Z-score: 1429.6 bits: 274.0 E(): 6.3e-71 Smith-Waterman score: 1982; 78.788% identity (85.606% similar) in 396 aa overlap (1-357:265-660) 10 20 FLJ002 DILMSSVKGLAENEENKG-------FLRNV :::::::::::::::::: ::::: gi|739 VMVVTLDPSRDQCFGDRFSRLLLAEFLGYDDILMSSVKGLAENEENKGSAGPSTSFLRNV 240 250 260 270 280 290 30 40 50 60 70 FLJ002 VSGEHYRFVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFI------------- ::::::::::::::::::::::.:::::::::::::::::::::::: gi|739 VSGEHYRFVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIGECPCWPVSRVGG 300 310 320 330 340 350 80 90 100 110 FLJ002 -------------------VDLLQMLEMNMAIAFPAAPLLTVILALVGMEAIMSEFFNDT ::::::::::::::::::::::::::::: .:::::::::: gi|739 VGSPPGTSPGLPARRSLPAVDLLQMLEMNMAIAFPAAPLLTVILALVGEDAIMSEFFNDT 360 370 380 390 400 410 120 130 140 150 160 170 FLJ002 TTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTS :: :::::.::::::::::::::.: :::::::::::::::::::::::::::::::::: gi|739 TTDFYIILLVWLADQYDAICCHTNTIKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTS 420 430 440 450 460 470 180 190 200 210 220 230 FLJ002 WLFIQHSMIYFFHHYELPAILQQVRIQEMLLQAPPLGPGTPTALPDDMNNNSGAPATAPD :::::::::::::::::::::::.::::::::.::::::.:::::::.:::.::::: :: gi|739 WLFIQHSMIYFFHHYELPAILQQIRIQEMLLQTPPLGPGAPTALPDDLNNNGGAPATIPD 480 490 500 510 520 530 240 250 260 270 280 290 FLJ002 SAGQPPALGPVSPGASGSPGPVAAAPSSLVAAAASVAAAAGGDLGWMAETAAIITDASFL ::::::::: ::..:.::::: ::::::::::::::::.:::::::::::.::::::: gi|739 PAGQPPALGPGLPGTGGGPGPVAEAPSSLVAAAASVAAAASGDLGWMAETAAMITDASFL 540 550 560 570 580 590 300 310 320 330 340 350 FLJ002 SGLSASLLERRPASPLGPAGGLPHAPQDSVPPSDSAASDTTPLGAAVGGPSPASMAPTEA :::::::::::::.::.:.::::.:::::.: :.: : ::. .:.:.::: : .:.. gi|739 SGLSASLLERRPAGPLSPGGGLPRAPQDSAPSSNSLAHDTALPAAGVSGPSSAPTTPVDP 600 610 620 630 640 650 FLJ002 PSEVGS : :::: gi|739 PPEVGS 660 >>gi|3025447|gb|AAC12681.1| R32184_3 [Homo sapiens] (529 aa) initn: 1620 init1: 1620 opt: 1620 Z-score: 1414.4 bits: 270.8 E(): 4.4e-70 Smith-Waterman score: 1620; 100.000% identity (100.000% similar) in 242 aa overlap (1-242:264-505) 10 20 30 FLJ002 DILMSSVKGLAENEENKGFLRNVVSGEHYR :::::::::::::::::::::::::::::: gi|302 VMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYR 240 250 260 270 280 290 40 50 60 70 80 90 FLJ002 FVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 FVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL 300 310 320 330 340 350 100 110 120 130 140 150 FLJ002 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHF 360 370 380 390 400 410 160 170 180 190 200 210 FLJ002 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQVRIQEMLLQAPPLGPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|302 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQVRIQEMLLQAPPLGPG 420 430 440 450 460 470 220 230 240 250 260 270 FLJ002 TPTALPDDMNNNSGAPATAPDSAGQPPALGPVSPGASGSPGPVAAAPSSLVAAAASVAAA :::::::::::::::::::::::::::::::: gi|302 TPTALPDDMNNNSGAPATAPDSAGQPPALGPVFELVSKERGWGSAEGSGGVLVGLQ 480 490 500 510 520 280 290 300 310 320 330 FLJ002 AGGDLGWMAETAAIITDASFLSGLSASLLERRPASPLGPAGGLPHAPQDSVPPSDSAASD >>gi|118103215|ref|XP_418222.2| PREDICTED: hypothetical (720 aa) initn: 1424 init1: 1396 opt: 1576 Z-score: 1374.5 bits: 263.9 E(): 7.4e-68 Smith-Waterman score: 1581; 70.350% identity (82.210% similar) in 371 aa overlap (1-352:263-626) 10 20 30 FLJ002 DILMSSVKGLAENEENKGFLRNVVSGEHYR ::::::::.::::::::::::::::::::: gi|118 VMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKALAENEENKGFLRNVVSGEHYR 240 250 260 270 280 290 40 50 60 70 80 90 FLJ002 FVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL :::::::::::::::.:::::::::::::::::::::::::::::::::::.:::::::: gi|118 FVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMTIAFPAAPL 300 310 320 330 340 350 100 110 120 130 140 150 FLJ002 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHF ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|118 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTNTSKRHWLRFFYLYHF 360 370 380 390 400 410 160 170 180 190 200 210 FLJ002 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQVRIQEMLLQAPPLGPG ::::::::::::::::::::::::::::::::::::::::::.:.:::::::: .: : gi|118 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILRQIRIQEMLLQNQQVGQG 420 430 440 450 460 470 220 230 240 250 260 270 FLJ002 TPTALPDDMNNNSGAPATAPDSAGQPPALGPVSPGASGSPGPVAAAPSSLVAAAASVAAA : :.: :..:::. .:: : . .:. : :. : :.::. .: . .: : :.:. :.. gi|118 TQTTLQDNLNNNT-TPAGA-EVGGHRPHLAAGPSGESSSPAALAPSEASSVIATAA-ASS 480 490 500 510 520 280 290 300 310 320 FLJ002 AGGDLGWMAETAAIITDASFLSGLSASLLERRPASPLGPAGGLPHAPQDSVPPS------ .:.::.:.::::::.:.::::: ::.:::: . :: .:::.. : gi|118 VGSDLNWVAETAAIVTEASFLSDLSSSLLEPNVVHEAVAAG----SPQDAAAASGLVARI 530 540 550 560 570 580 330 340 350 FLJ002 -------DSAASDTT------PLGAAVGGPSPASMAPTEAPSEVGS :.:... : :. ::. :: : .: . : gi|118 RVSSDHPDTAVGSITIEVTSAPVVAAADGPPAAEVAAAPPPIPIQEDGASTPSPSPAEQT 590 600 610 620 630 640 gi|118 EAVESSDSQAKPSGKNCIANGSVAESPLAFVENTDQDKLLGCTLGDRGESGPCPAPADST 650 660 670 680 690 700 >>gi|72679409|gb|AAI00298.1| ORF61 protein [Mus musculus (352 aa) initn: 1673 init1: 1497 opt: 1564 Z-score: 1368.2 bits: 261.7 E(): 1.6e-67 Smith-Waterman score: 1749; 83.434% identity (91.867% similar) in 332 aa overlap (1-326:33-352) 10 20 30 FLJ002 DILMSSVKGLAENEENKGFLRNVVSGEHYR :::::::::::::::::::::::::::::: gi|726 VMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYR 10 20 30 40 50 60 40 50 60 70 80 90 FLJ002 FVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|726 FVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL 70 80 90 100 110 120 100 110 120 130 140 150 FLJ002 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHF ::::::::::::::::::::::::::::: ::::::::::::::.::::::::::::::: gi|726 LTVILALVGMEAIMSEFFNDTTTAFYIILTVWLADQYDAICCHTNTSKRHWLRFFYLYHF 130 140 150 160 170 180 160 170 180 190 200 210 FLJ002 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQVRIQEMLLQAPPLGPG ::::::::::::::::::::::::::::::::::::::::::::.::::::::.:::::: gi|726 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQIRIQEMLLQTPPLGPG 190 200 210 220 230 240 220 230 240 250 260 FLJ002 TPTALPDDMNNNSGAPATAPDSAGQPP-ALGPVSPGASGSPGPV--AAAPSSLVAAAASV ::::::::.:::::.::: :: . :: :::: :.::.:. :..:.:: .:.::: gi|726 TPTALPDDLNNNSGSPAT-PDPS--PPLALGP-----SSSPAPTGGASGPGSL-GAGASV 250 260 270 280 290 270 280 290 300 310 320 FLJ002 AAAAGGDLGWMAETAAIITDASFLSGLSASLLERRPASPLGPAGGLPH--APQDSVP-PS .:.::::.:::::::.:::::::::::::::::..: : .. : .: ...: :. gi|726 ---SGSDLGWVAETAAIISDASFLSGLSASLLERRPTAPSTPDSSRPDPGVPLEDAPAPA 300 310 320 330 340 350 330 340 350 FLJ002 DSAASDTTPLGAAVGGPSPASMAPTEAPSEVGS : gi|726 GS >>gi|13529560|gb|AAH05494.1| ORF61 protein [Mus musculus (481 aa) initn: 1673 init1: 1497 opt: 1564 Z-score: 1366.4 bits: 261.8 E(): 2.1e-67 Smith-Waterman score: 1749; 83.434% identity (91.867% similar) in 332 aa overlap (1-326:162-481) 10 20 30 FLJ002 DILMSSVKGLAENEENKGFLRNVVSGEHYR :::::::::::::::::::::::::::::: gi|135 VMVVTLDPTRDQCFGDRFSRLLLDEFLGYDDILMSSVKGLAENEENKGFLRNVVSGEHYR 140 150 160 170 180 190 40 50 60 70 80 90 FLJ002 FVSMWMARTSYLAAFAIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|135 FVSMWMARTSYLAAFVIMVIFTLSVSMLLRYSHHQIFVFIVDLLQMLEMNMAIAFPAAPL 200 210 220 230 240 250 100 110 120 130 140 150 FLJ002 LTVILALVGMEAIMSEFFNDTTTAFYIILIVWLADQYDAICCHTSTSKRHWLRFFYLYHF ::::::::::::::::::::::::::::: ::::::::::::::.::::::::::::::: gi|135 LTVILALVGMEAIMSEFFNDTTTAFYIILTVWLADQYDAICCHTNTSKRHWLRFFYLYHF 260 270 280 290 300 310 160 170 180 190 200 210 FLJ002 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQVRIQEMLLQAPPLGPG ::::::::::::::::::::::::::::::::::::::::::::.::::::::.:::::: gi|135 AFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYELPAILQQIRIQEMLLQTPPLGPG 320 330 340 350 360 370 220 230 240 250 260 FLJ002 TPTALPDDMNNNSGAPATAPDSAGQPP-ALGPVSPGASGSPGPV--AAAPSSLVAAAASV ::::::::.:::::.::: :: . :: :::: :.::.:. :..:.:: .:.::: gi|135 TPTALPDDLNNNSGSPAT-PDPS--PPLALGP-----SSSPAPTGGASGPGSL-GAGASV 380 390 400 410 420 270 280 290 300 310 320 FLJ002 AAAAGGDLGWMAETAAIITDASFLSGLSASLLERRPASPLGPAGGLPH--APQDSVP-PS .:.::::.:::::::.:::::::::::::::::..: : .. : .: ...: :. gi|135 ---SGSDLGWVAETAAIISDASFLSGLSASLLERRPTAPSTPDSSRPDPGVPLEDAPAPA 430 440 450 460 470 330 340 350 FLJ002 DSAASDTTPLGAAVGGPSPASMAPTEAPSEVGS : gi|135 GS 480 357 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Sat Feb 28 05:45:16 2009 done: Sat Feb 28 05:51:23 2009 Total Scan time: 837.530 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]