# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sh01728.fasta.nr -Q ../query/FLJ00280.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00280, 440 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7793747 sequences Expectation_n fit: rho(ln(x))= 6.6714+/-0.000216; mu= 4.3278+/- 0.012 mean_var=169.1404+/-32.064, 0's: 27 Z-trim: 123 B-trim: 126 in 1/64 Lambda= 0.098617 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|34526507|dbj|BAC85131.1| FLJ00280 protein [Homo ( 440) 3282 478.9 1e-132 gi|171994576|gb|ACB65495.1| type VI secretion syst (1048) 508 84.7 1.1e-13 gi|156232020|gb|ABU56803.1| conserved hypothetical ( 625) 494 82.5 3.2e-13 gi|145015011|gb|EDJ99579.1| hypothetical protein M ( 737) 480 80.5 1.4e-12 gi|119714|sp|P13983.1|EXTN_TOBAC RecName: Full=Ext ( 620) 452 76.5 2e-11 gi|149269596|ref|XP_001475272.1| PREDICTED: hypoth ( 789) 447 75.9 3.9e-11 gi|119627579|gb|EAX07174.1| hCG1793893 [Homo sapie ( 478) 439 74.5 6.2e-11 gi|119618954|gb|EAW98548.1| hCG1795187 [Homo sapie ( 398) 433 73.6 9.9e-11 gi|15145797|gb|AAK61383.1| basic proline-rich prot ( 676) 423 72.4 3.7e-10 gi|97180301|sp|Q95JC9.2|PRP_PIG RecName: Full=Basi ( 676) 423 72.4 3.7e-10 gi|156544393|ref|XP_001607443.1| PREDICTED: hypoth ( 972) 419 72.0 7.1e-10 gi|15145793|gb|AAK61381.1| basic proline-rich prot ( 566) 414 71.0 8.1e-10 gi|72415554|emb|CAI65791.1| putative membrane prot (2332) 423 73.0 8.5e-10 gi|38605837|emb|CAE02917.3| OSJNBb0108J11.9 [Oryza ( 360) 410 70.2 8.9e-10 gi|25056007|gb|AAD55980.2|AF159297_1 extensin-like (1016) 416 71.6 9.8e-10 gi|110761661|ref|XP_001121073.1| PREDICTED: hypoth ( 441) 410 70.3 1e-09 gi|194227270|ref|XP_001492593.2| PREDICTED: simila (1179) 414 71.4 1.3e-09 gi|114678086|ref|XP_001153746.1| PREDICTED: hypoth ( 439) 404 69.5 1.8e-09 gi|72415393|emb|CAI65630.1| putative membrane prot ( 430) 400 68.9 2.7e-09 gi|209968039|ref|YP_002296214.1| putative membrane ( 414) 398 68.6 3.2e-09 gi|110762739|ref|XP_393988.3| PREDICTED: similar t (2659) 410 71.2 3.3e-09 gi|15145795|gb|AAK61382.1| basic proline-rich prot ( 511) 398 68.7 3.7e-09 gi|21757477|dbj|BAC05130.1| unnamed protein produc ( 411) 396 68.3 3.9e-09 gi|158937521|sp|Q8N7U7.2|TPRX1_HUMAN RecName: Full ( 411) 396 68.3 3.9e-09 gi|187953581|gb|AAI37502.1| Tetra-peptide repeat h ( 411) 396 68.3 3.9e-09 gi|219541993|gb|ACL23731.1| laminin G, domain-cont (1746) 405 70.3 4.1e-09 gi|149250124|ref|XP_001005109.2| PREDICTED: hypoth ( 303) 393 67.7 4.3e-09 gi|6523547|emb|CAB62280.1| hydroxyproline-rich gly ( 409) 395 68.2 4.3e-09 gi|119590488|gb|EAW70082.1| formin 2 [Homo sapiens (1254) 402 69.7 4.5e-09 gi|146404027|gb|ABQ32533.1| putative exported prot ( 727) 398 68.9 4.6e-09 gi|41400381|gb|AAS07042.1| minus agglutinin [Chlam (3889) 409 71.3 4.7e-09 gi|257041|gb|AAB23539.1| hydroxyproline-rich glyco ( 328) 392 67.6 5e-09 gi|228938|prf||1814452C Hyp-rich glycoprotein ( 349) 392 67.7 5.2e-09 gi|171998170|gb|ACB69086.1| type VI secretion syst (1057) 399 69.2 5.4e-09 gi|158279899|gb|EDP05658.1| fibrocystin-L-like pro (4806) 408 71.2 6e-09 gi|113579596|dbj|BAF17959.1| Os05g0516400 [Oryza s ( 827) 396 68.7 6.1e-09 gi|188864|gb|AAA59875.1| mucin [Homo sapiens] ( 573) 393 68.0 6.5e-09 gi|222865013|gb|EEF02144.1| predicted protein [Pop ( 390) 389 67.3 7.5e-09 gi|27348769|dbj|BAC45786.1| blr0521 [Bradyrhizobiu ( 745) 393 68.2 7.7e-09 gi|210123902|gb|EEA71601.1| hypothetical protein B ( 539) 390 67.6 8.4e-09 gi|117606933|gb|ABK42021.1| vegetative cell wall p ( 613) 390 67.7 9.1e-09 gi|196197364|gb|EDX92224.1| putative FHA domain co (2014) 395 69.0 1.2e-08 gi|4539386|emb|CAB37452.1| extensin-like protein [ ( 839) 389 67.7 1.2e-08 gi|221117735|ref|XP_002161185.1| PREDICTED: hypoth ( 373) 382 66.3 1.4e-08 gi|22333|emb|CAA44844.1| hydroxyproline-rich glyco ( 303) 380 65.9 1.5e-08 gi|166215083|sp|Q9NZ56.4|FMN2_HUMAN RecName: Full= (1722) 390 68.2 1.8e-08 gi|119712|sp|P14918.1|EXTN_MAIZE RecName: Full=Ext ( 267) 376 65.3 2.1e-08 gi|186396|gb|AAA59163.1| mucin (1270) 386 67.4 2.2e-08 gi|212512232|gb|EEB15040.1| conserved hypothetical (1481) 386 67.5 2.4e-08 gi|227614|prf||1707318A Thr rich extensin ( 251) 374 64.9 2.4e-08 >>gi|34526507|dbj|BAC85131.1| FLJ00280 protein [Homo sap (440 aa) initn: 3282 init1: 3282 opt: 3282 Z-score: 2539.0 bits: 478.9 E(): 1e-132 Smith-Waterman score: 3282; 100.000% identity (100.000% similar) in 440 aa overlap (1-440:1-440) 10 20 30 40 50 60 FLJ002 VARPRWGWGCHADGTRTRTLPPPGILRTPGTLPCPGTLPPPRTHSYLPGHSPLLGHTPTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 VARPRWGWGCHADGTRTRTLPPPGILRTPGTLPCPGTLPPPRTHSYLPGHSPLLGHTPTS 10 20 30 40 50 60 70 80 90 100 110 120 FLJ002 RDTPPSRNTLPPPWMLPSPRTLPSPRTLPSPRTLPTPGTHFYLPGHSPLLGHTSPSWDTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 RDTPPSRNTLPPPWMLPSPRTLPSPRTLPSPRTLPTPGTHFYLPGHSPLLGHTSPSWDTL 70 80 90 100 110 120 130 140 150 160 170 180 FLJ002 PPPGTHFPLQGHTSPSWDILPTPGMLPSPRTLPAPRTHSYFLGRSPFPGHSPLLGHYPLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 PPPGTHFPLQGHTSPSWDILPTPGMLPSPRTLPAPRTHSYFLGRSPFPGHSPLLGHYPLP 130 140 150 160 170 180 190 200 210 220 230 240 FLJ002 GHTPRYRDTPPSRDTPPSRDIPLSLDAPLSLDTPYSRDTLPATGTLPPPRTLPSPGTLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 GHTPRYRDTPPSRDTPPSRDIPLSLDAPLSLDTPYSRDTLPATGTLPPPRTLPSPGTLPP 190 200 210 220 230 240 250 260 270 280 290 300 FLJ002 SGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLPTPRTLPTPGTLPRPGTSYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 SGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLPTPRTLPTPGTLPRPGTSYV 250 260 270 280 290 300 310 320 330 340 350 360 FLJ002 LYGTVGGRAWGLSFPPSLIRRCTMRGLSVAFREVMGCRWRFGGSGEGGWLCSRGCPGEPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 LYGTVGGRAWGLSFPPSLIRRCTMRGLSVAFREVMGCRWRFGGSGEGGWLCSRGCPGEPR 310 320 330 340 350 360 370 380 390 400 410 420 FLJ002 ALCPSPPTPRPQLSFHAVMVVHRATAQKCLLHAHHTPRDAMRRPGRWLGAQLWGFGVRLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 ALCPSPPTPRPQLSFHAVMVVHRATAQKCLLHAHHTPRDAMRRPGRWLGAQLWGFGVRLA 370 380 390 400 410 420 430 440 FLJ002 VEAWMGQAPRKAGPPPGKGV :::::::::::::::::::: gi|345 VEAWMGQAPRKAGPPPGKGV 430 440 >>gi|171994576|gb|ACB65495.1| type VI secretion system V (1048 aa) initn: 1970 init1: 273 opt: 508 Z-score: 401.6 bits: 84.7 E(): 1.1e-13 Smith-Waterman score: 603; 31.900% identity (55.556% similar) in 279 aa overlap (20-298:742-1012) 10 20 30 40 FLJ002 VARPRWGWGCHADGTRTRTLPPPGILRTPGTLPCPGTLPPPRTHSYLPG .:::. . :. .: :. .::: .. :. gi|171 PPPPPTVVPPPPPPPSVEPPPPSEMPPPSEMPPPSEMPPPSEMPPPSEMPPP-SEMPPPS 720 730 740 750 760 770 50 60 70 80 90 100 FLJ002 HSPLLGHTPTSRDTPPSRNTLPPPWMLPSPRTLPSPRTLPSPRTLPTPGTHFYLPGHSPL . : .. : .::: . .::: .: : .: : .: : .: : ... :...: gi|171 EMPPPSEMPPPSETPPP-SEMPPPSEMPPPSEMPPPSEMPPPSEMPPP-SEMPPPSETPP 780 790 800 810 820 110 120 130 140 150 160 FLJ002 LGHTSPSWDTLPPPGTHFPLQGHTSPSWDILPTPGMLPSPRTLPAPRTHSYFLGRSPFPG ..: : .: ::: .. : ..: : . : :. : : : : ... ...: :. gi|171 PSETPPPSET-PPP-SETPPPSETPPPSET-PPPSETPPPSETPPP-SETPPPSETPPPS 830 840 850 860 870 880 170 180 190 200 210 220 FLJ002 HSPLLGHYPLPGHTPRYRDTPPSRDTPPSRDIPLSLDAPLSLDTPYSRDTLPATGTLPPP ..: .. : :..:: .::: .::: . : ..: .:: .: : . : ::: gi|171 ETPPPSETPPPSETPPPSETPPPSETPPPSETPPPSETPPPSETPPPSETPPPSET-PPP 890 900 910 920 930 940 230 240 250 260 270 280 FLJ002 RTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLPTPRTLPTP : :. :: . :::. .: :. : :. : : : :. : : : : : : gi|171 SETPPPSETPPPSETPPPSETPPPSETPPPSETPPPSETPPPSETPPPSETPPPSETPPP 950 960 970 980 990 1000 290 300 310 320 330 340 FLJ002 GTLPRPGTSYVLYGTVGGRAWGLSFPPSLIRRCTMRGLSVAFREVMGCRWRFGGSGEGGW . : :. . gi|171 SETPPPSETPPPSETPPPSETPPPSETPPPSETPPPSEEPPESEF 1010 1020 1030 1040 >>gi|156232020|gb|ABU56803.1| conserved hypothetical pro (625 aa) initn: 223 init1: 223 opt: 494 Z-score: 393.5 bits: 82.5 E(): 3.2e-13 Smith-Waterman score: 494; 31.153% identity (47.040% similar) in 321 aa overlap (21-317:189-495) 10 20 30 40 FLJ002 VARPRWGWGCHADGTRTRTLPPPGILRTPGTL------PCPGTLPPPRTH : :.. .::. : : . : : :. gi|156 PEATATPEPSPTDNPSSTTSPTDTPAPTETPTPSLTHTPSPTDEANDTPQPTASPEP-TR 160 170 180 190 200 210 50 60 70 80 90 FLJ002 SYLPGHSPLLGHTPTSRDTPPSRNTLPPPWMLPSPRTLPSPRTLPSPRTLPT--P---GT . : : . ::. : . .: : ::: ::: ::: :: : .. gi|156 TPSPTDEPTTSPEPTASPQPTASHT-SSPTKTPSPTRTPSPTRTPSPTDEPTASPEPTAS 220 230 240 250 260 270 100 110 120 130 140 150 FLJ002 HFYLPGHSPLLGHTSPSWDTLPPPGTHFPLQGHTSPSWDILPTPGMLPSPRTLPAPRTHS : : ..: .: :: : : : : . :. . :.:. ::: :.: gi|156 HTSSPTKTPSPTRT-PSPTRTPSP-TDEPTAS-PEPTASRTPSPSKTPSPTRTPSPT--- 280 290 300 310 320 330 160 170 180 190 200 210 FLJ002 YFLGRSPFPGHSPLLGHYPLPGHTPRYRDTP-PSRDTPPSRDIPLSLDAPLSLDTPYSRD :.: : : . : ..:: :: :.: ::: : : : . : . gi|156 ----RTPSPTDEPTASPEPTASRTPSPSKTPSPTRTPSPSRT-PTPTDEPTTAPEPTASR 340 350 360 370 380 220 230 240 250 260 FLJ002 TLPATGTLPPPRTLPSPGTLP-P---SGTL--------PPPGTVPTPGTLPSPGTLPAPR : :. . : : :::. : : ::.. : :. .:.:. :::. :.: gi|156 T-PSPSKTPSPTRTPSPSRTPSPINESGAMIEPTATRTPSPSKTPSPSKTPSPSKTPSPS 390 400 410 420 430 440 270 280 290 300 310 320 FLJ002 TLPTPGTLPSPRTLPTPRTLPTPGTLPRPGTSYVLYGTVGGRAWGLSFPPSLIRRCTMRG :.:. ::: :.: :.: : :. . : ..: : . .. :: gi|156 KTPSPSKTPSPSKTPSPSKTPSPTRTPSPSRTVQSGGITSGSASSRTITPSSRDGMAGGS 450 460 470 480 490 500 330 340 350 360 370 380 FLJ002 LSVAFREVMGCRWRFGGSGEGGWLCSRGCPGEPRALCPSPPTPRPQLSFHAVMVVHRATA gi|156 ESATPSTTRRPYHHVPAWAAEGLPTIAPFVISGSREPYRALLTPSATASATQTPTPKPTS 510 520 530 540 550 560 >>gi|145015011|gb|EDJ99579.1| hypothetical protein MGG_1 (737 aa) initn: 254 init1: 254 opt: 480 Z-score: 381.9 bits: 80.5 E(): 1.4e-12 Smith-Waterman score: 503; 30.412% identity (42.526% similar) in 388 aa overlap (21-371:177-550) 10 20 30 40 50 FLJ002 VARPRWGWGCHADGTRTRTLPPPGILRTPGTLPCPGTLPPPRTHSYLPGH ::: . : :: : . ::: .. : . gi|145 DNPPPPGKPPPNKLEGFGRPPAPDSPPPNRPPPPV-RPPGLGRPPPNKPPPPVEPPAPER 150 160 170 180 190 200 60 70 80 90 FLJ002 SPLLGHTPTSRDTPPSR------NTLPPPWMLPSPRTL-----PSPRTL-----PSPRTL .: :. : :. ::.: . ::: : : : : : : ::: : gi|145 APAPGKPPPSKPPPPARPPGRPPASKPPPPGRPPPSRLAGSGRPPPNKLAGSGSPSPNKL 210 220 230 240 250 260 100 110 120 130 140 FLJ002 P----TPGTHFYLPGHSPLLGHTSPSWDTLP--PPGTHFPLQGHTSPSW--------DIL : ... :..: :. :. : :: ... .:. :: gi|145 AGSGSPPPSKLAGSGKAPAPGRPPPNKPPPPDRPPPSRLAGSGKPPPSKLAGSGKPPPNK 270 280 290 300 310 320 150 160 170 180 190 200 FLJ002 PTPGMLPSPRTLPAPRTHSYFLGRSPFPGHSPLLGHYPLPGHTPRYRDTPPSRDTPPSRD : :: : : . : : : : ::. :: . : : . : :: : ::. gi|145 PPPGGRPPPSNPPPPV-------RPPPPGEPPLPDNPPPPDEPP-VSGKPPPGDEPPASA 330 340 350 360 370 210 220 230 240 250 260 FLJ002 IPLSLDAPLSLDTPYSRDTLPATGTLPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPG : : : : : : : ::: : : . : ::: : :. : : gi|145 RPPPPDRPPPPDRPPPPDEPPPPDEPPPPSEPPPPPNEP-----PPPDEPPPPNESPPPD 380 390 400 410 420 430 270 280 290 300 310 FLJ002 TLPAPRTLPTPGTLPSPRTLPTPRTLPTPGTLPRPGTSYVLYGT-VGGRAWGLSFPPSLI . : : : : . : : . : : . : : : :: .: : .::. ... ::.. gi|145 APPPPNEPPPPDAPPPPDAPPPPDAPPPPDEPPPPGEPPALEGPPAGGKPPAFGRPPGFG 440 450 460 470 480 490 320 330 340 350 360 370 FLJ002 RR-CTMRGLSVAFREVMGCRWRFGGSGEGGWLCSRGCP----GEPR-ALCPSPPTPRPQL : . . .: ::: . : : : : :: . :.:: : : gi|145 GPPAPGRPPGFGGPPPLGRPPAFGGPPDLGGPPRPGNPPALGGPPRRGEPPAPPKPPPFG 500 510 520 530 540 550 380 390 400 410 420 430 FLJ002 SFHAVMVVHRATAQKCLLHAHHTPRDAMRRPGRWLGAQLWGFGVRLAVEAWMGQAPRKAG gi|145 EPPAPPRPPAPPRPPAPPKPPPFGKPPAPPKPPAPPKPPAPPKPPPFGKPPGPPEPGKPP 560 570 580 590 600 610 >>gi|119714|sp|P13983.1|EXTN_TOBAC RecName: Full=Extensi (620 aa) initn: 449 init1: 248 opt: 452 Z-score: 361.2 bits: 76.5 E(): 2e-11 Smith-Waterman score: 501; 34.304% identity (47.249% similar) in 309 aa overlap (21-299:125-416) 10 20 30 40 FLJ002 VARPRWGWGCHADGTRTRTLPPPGILRTPGTLPCPGTLPPPRTHSYLP-- :::. . :: :: : :: .:.. : gi|119 HRGHLPPSRGFNPPPSPVISPSHPPPSYGAPPPS--HGPGHLPSHGQRPPSPSHGHAPPS 100 110 120 130 140 150 50 60 70 80 90 100 FLJ002 -GHSPLLGHTPTS--RDTPPSRNTLPPP--WMLPSPRTL--PSPRTLPSPRTLPTPGTHF ::.: :. : : : .::::. ::: . : : . :::.. : : : : :: gi|119 GGHTPPRGQHPPSHRRPSPPSRHGHPPPPTYAQPPPTPIYSPSPQVQPPPTYSPPPPTHV 160 170 180 190 200 210 110 120 130 140 150 FLJ002 YLPGHSPLLGHTSPSWDTLPPPGTHF---PLQGHTSPSWDILPTPGMLPSPRTLPAPRTH : :: :: : : :: : . :. :. . : . :::: : : :. gi|119 Q-PTPSP------PSRGHQPQPPTHRHAPPTHRHAPPTHQPSPLRHLPPSPRRQPQPPTY 220 230 240 250 260 160 170 180 190 200 210 FLJ002 S-----YFLGRSPFPGHSPLLGHYPLPGHTPRYRDTPPSRD-TPPSRDIPLSLDAPLSLD : : . .: : .:: : : .: : ::. . .:: : ... : gi|119 SPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTP-TFSPPPPAY 270 280 290 300 310 320 220 230 240 250 260 FLJ002 TPYSRDTLPATGTLPPPRTLPSPGT---LPPSGTL---PPPGTVPTPGTL---PSPGTLP .: : : . ::: :: :.. :: . :::. : : : : :.. : gi|119 SP------PPTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPP 330 340 350 360 370 270 280 290 300 310 320 FLJ002 APRTLPTPGTL---PSPRTLPTPRTLPTPGTLPRPGTSYVLYGTVGGRAWGLSFPPSLIR : : : : : : .: ::.: : : .: gi|119 PPSFSPPPPTYEQSPPPPPAYSP-PLPAPPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPP 380 390 400 410 420 430 330 340 350 360 370 380 FLJ002 RCTMRGLSVAFREVMGCRWRFGGSGEGGWLCSRGCPGEPRALCPSPPTPRPQLSFHAVMV gi|119 PAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPSPIYSPPPPQVQP 440 450 460 470 480 490 >>gi|149269596|ref|XP_001475272.1| PREDICTED: hypothetic (789 aa) initn: 210 init1: 210 opt: 447 Z-score: 356.2 bits: 75.9 E(): 3.9e-11 Smith-Waterman score: 454; 31.690% identity (45.423% similar) in 284 aa overlap (15-295:449-707) 10 20 30 40 FLJ002 VARPRWGWGCHADGTRTRTLPPPGILRTPGTLPCPGTLPPPRTH :.:.. : : : : : : :: :. . gi|149 PQPQPQPQPQPLPQPQPQPQPLPQPQPQTQTQTQSTPQPQPLPQPQPQPLPQPLPQPQPQ 420 430 440 450 460 470 50 60 70 80 90 100 FLJ002 SYLPGHSPLLGHTPTSRDTP-PSRNTLPPPWMLPSPRTLPSPRTLPSPRTLPTPGTHFYL : .: : : :. . :: : ::.:. :.:. :: :. :: : gi|149 ---PQPQPQPQPLPQPLPQPQPQPQPLPLPQPLPQPQPQPQPQPLPLPQPLPQPQ----- 480 490 500 510 520 530 110 120 130 140 150 160 FLJ002 PGHSPLLGHTSPSWDTLPPPGTHFPLQGHTSPSWDILPTPGMLPSPRTLPAPRTHSYFLG : .:: :. .: : : :. : .:.:. . :: : ::.:. :: : . gi|149 PQPQPL-----PQTQTQPQPQTQTQTQTQTKPQPQPLPQP--LPQPQPLPQPLPQ----- 540 550 560 570 170 180 190 200 210 220 FLJ002 RSPFPGHSPLLGHYPLPGHTPRYRDT--PPSRDTPPSRDIPLSLDAPLSLDTPYSRDTLP : : .:: : : :. . : . : . .: : : : . : gi|149 --PQPQPQPLPQPQPQPQPLPQTQTQTQPQPQPQPLPQPLPQPQPQPQPLPQPQPQ---P 580 590 600 610 620 630 230 240 250 260 270 280 FLJ002 ATGTLPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLP : : :. :.: : :: : : : :.: :: :. : : ::. .: gi|149 QTQPQPQPQPQPQPLPQPQPQPLPLPQPQPQPQPQPQPLPLPQPQPQPQPQPLPQTQTQT 640 650 660 670 680 690 290 300 310 320 330 340 FLJ002 TPRTLPTPGTLPRPGTSYVLYGTVGGRAWGLSFPPSLIRRCTMRGLSVAFREVMGCRWRF .: : : :.: gi|149 QTQTQPQPQPQPQPQPQPQPLPQPQPQPLPQTQTQPQPQPQPQPQPQPQPQPQPLPQTQT 700 710 720 730 740 750 >>gi|119627579|gb|EAX07174.1| hCG1793893 [Homo sapiens] (478 aa) initn: 295 init1: 295 opt: 439 Z-score: 352.6 bits: 74.5 E(): 6.2e-11 Smith-Waterman score: 504; 36.713% identity (46.154% similar) in 286 aa overlap (21-295:181-438) 10 20 30 40 50 FLJ002 VARPRWGWGCHADGTRTRTLPPPGILRTPGTLPCPGTLPPPRTHSYLPGH ::: . : .:: : ::: :: gi|119 PLPPVPPPSPPPLPPLPPPSPPPPLPPLPSPPPPLSPPPPSLPSP---PPP-----LPPP 160 170 180 190 200 60 70 80 90 100 FLJ002 SPLLGHTPTSRDTPPSRNTLP----PPWMLPSPRTLPSPRTLPSPRTLPTPGTHFYLPGH : . : : ::. :: :: ::: ::: : : : .:: : . : gi|119 PPPIPLPPPSLPPPPTSPPLPSLPSPPPPLPSSPLPPSPPTPPLPPSLPLPPS----PTP 210 220 230 240 250 110 120 130 140 150 160 FLJ002 SPLLGHTSPSWDTLPPPGTHFPLQGHTSPSWDILPTPGMLPSPRTLPAPRTHSYFLGRSP : :. :: . ::: .:: :: :: : : : .::.: . :: gi|119 PPPLSPPPPSLPSPPPP---IPLPPLPPPS---LPPPPSPPLPPSLPSPPSPLSPPPSSP 260 270 280 290 300 310 170 180 190 200 210 220 FLJ002 FPGHSPLLGHYPLPGHTPRYRDTPPSRDTPPSRDIPLSLDAPLSLDTPYSRDTLPAT--- :. : : :.: : ::: ..:: .: : .: : . :: . gi|119 -PSPPPPLPPPPIP--LP---PIPPSLQSPPPPPLPPLLPSPPPTPLPPASPPLPPSLPS 320 330 340 350 360 230 240 250 260 270 FLJ002 ---GTLPPPR-TLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRT . ::: .:::: ::: . ::: . : :. ::: . : : :: : ::: gi|119 PPLPSPPPPSPSLPSPPPPPPSPSPPPPPSPPLPSPPPSPPSPPLP-PLPQPPPPPSP-- 370 380 390 400 410 420 280 290 300 310 320 330 FLJ002 LPTPRTLPTPGTLPRPGTSYVLYGTVGGRAWGLSFPPSLIRRCTMRGLSVAFREVMGCRW :.: : : :: : gi|119 -PSPPPPPPPIPLPSPPSPLPPPPLPSPPPPPPPSPPSPPPPPPLPSSAFTGHSSP 430 440 450 460 470 >>gi|119618954|gb|EAW98548.1| hCG1795187 [Homo sapiens] (398 aa) initn: 149 init1: 97 opt: 433 Z-score: 348.9 bits: 73.6 E(): 9.9e-11 Smith-Waterman score: 433; 39.871% identity (51.768% similar) in 311 aa overlap (11-297:48-332) 10 20 30 40 FLJ002 VARPRWGWGCHADGTRTRTLPPPGILRTPGTLPCPGTLPP :. : .:: : : .:: ::: :.:: gi|119 HTTHPLPGALPIPITHTPHPLPGALPIPITHTPHTLPGALPIP-ITHTPHTLP--GALPI 20 30 40 50 60 70 50 60 70 80 90 FLJ002 PRTHS--YLPGHSPL-LGHTPTSRD----TPPSRNTLPPPWMLPSPRTLPSPRTLPSPRT : ::. .::: :. . ::: . : ... : : :: : : .:. ::. . gi|119 PITHTPHHLPGALPIPITHTPHTLTGALPIPITHTPHPLPGDLPIPIT-HTPHPLPG--A 80 90 100 110 120 130 100 110 120 130 140 FLJ002 LPTPGTH--FYLPGHSPL-LGHTS-PSWDTLPPPGTHFPLQGHTSPSWDILPTP---GML :: : :: :: :. . :: : .:: : :: : : :: : gi|119 LPIPITHTPHPLPRDLPIPITHTPHPLPGALPIPITHT-----THPLPGALPIPIKHTTH 140 150 160 170 180 150 160 170 180 190 FLJ002 PSPRTLPAPRTHSYFL--GRSPFP-GHSP--LLGHYPLP-GHTPRYRDTPPSRDTP-PSR : ::.:: : ::. : :.: :.: : : :.: :::. : : : : gi|119 PLPRALPIPITHTTHTLSGALPIPITHTPHTLPGALPIPITHTPH----PLSGALPIPIT 190 200 210 220 230 240 200 210 220 230 240 250 FLJ002 DIPLSLDAPLSLDTPYSRDTLPATGTLPPPRTLPSPGTLPPSGTLPPPGTV---PTPGTL : : : .: : .. : .:.:: : : .: :: :: :: : : : ::.: gi|119 HTPHPL--PGALPIPITHTTHTLSGALPIPIT-HTPHTL--SGGLPIPITHTPHPLPGAL 250 260 270 280 290 260 270 280 290 300 310 FLJ002 PSPGTLPAPRTLPTPGTLPSPRTLPTPRTLPTPGTLPRPGTSYVLYGTVGGRAWGLSFPP : : : .:.:: ::.:: : : ::. : ::.:: : : gi|119 PIPIT-HTPHTL--PGALPIPIT-HTPH--PLPGALPIPITHTTHTSRGPPYTHYTHTTH 300 310 320 330 340 350 320 330 340 350 360 370 FLJ002 SLIRRCTMRGLSVAFREVMGCRWRFGGSGEGGWLCSRGCPGEPRALCPSPPTPRPQLSFH gi|119 PSRGAIRAPSGLSVQSSPSSGALSGGGPSPPRLPELSLSGGGPTWPT 360 370 380 390 >>gi|15145797|gb|AAK61383.1| basic proline-rich protein (676 aa) initn: 302 init1: 186 opt: 423 Z-score: 338.5 bits: 72.4 E(): 3.7e-10 Smith-Waterman score: 453; 37.809% identity (44.523% similar) in 283 aa overlap (14-296:265-509) 10 20 30 40 FLJ002 VARPRWGWGCHADGTRTRTLPPPGILRTPGTLPCPGTLPPPRT :.: ::: :: : ::. ::: gi|151 PPPPGPAPPGARPPPGPPPLGPPPPGPAPPGARPPPGPPPPGPPPPGPAP-PGARPPPGP 240 250 260 270 280 290 50 60 70 80 90 100 FLJ002 HSYLPGHSPLLGHTPTSRDTPPSRNTLPPPWMLPSPRTLPSPRTLPSPRTLPTPGTHFYL :: : : .: . ::. ::: : : : : . : : : :: gi|151 PP--PGPPPP-GPAPPGARPPPG----PPPPGPPPPGPAP-PGARPPPGP-PPPGPP--P 300 310 320 330 340 110 120 130 140 150 160 FLJ002 PGHSPLLGHTSPSWDTLPPPGTHFPLQGHTSPSWDILPTPGMLPSPRTLPAPRTHSYFLG :: .: .. :. :::: : : . :. : :: : : : : : gi|151 PGPAPPGARPPPGP---PPPGP--PPPGPAPPG--ARPPPG--PPPPGPPPPGPAPP--G 350 360 370 380 390 170 180 190 200 210 220 FLJ002 RSPFPGHSPLLGHYPLPGHTPRYRDTPPSRDTPPSRDIPLSLDAPLSLDTPYSRDTLPAT : :: : : :: .: :: :: : : . :: : : : .. :: gi|151 ARPPPGPPP--PGPPPPGPAPPGARPPP--PPPPPADEPQQGPAP-SGDKPKKKPPPPAG 400 410 420 430 440 230 240 250 260 270 280 FLJ002 GTLPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLPTP ::: :::: :: :. :::: : :: : :: : : . : :: : : : : gi|151 ---PPPPGPPSPGPAPP-GARPPPGP-PPPGP-PPPGPAP-PGARPPPG--PPPPGPPPP 450 460 470 480 490 290 300 310 320 330 340 FLJ002 RTLPTPGTLPRPGTSYVLYGTVGGRAWGLSFPPSLIRRCTMRGLSVAFREVMGCRWRFGG : ::. : :: gi|151 GPAP-PGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPG 500 510 520 530 540 550 >>gi|97180301|sp|Q95JC9.2|PRP_PIG RecName: Full=Basic pr (676 aa) initn: 302 init1: 186 opt: 423 Z-score: 338.5 bits: 72.4 E(): 3.7e-10 Smith-Waterman score: 453; 37.809% identity (44.523% similar) in 283 aa overlap (14-296:265-509) 10 20 30 40 FLJ002 VARPRWGWGCHADGTRTRTLPPPGILRTPGTLPCPGTLPPPRT :.: ::: :: : ::. ::: gi|971 PPPPGPAPPGARPPPGPPPLGPPPPGPAPPGARPPPGPPPPGPPPPGPAP-PGARPPPGP 240 250 260 270 280 290 50 60 70 80 90 100 FLJ002 HSYLPGHSPLLGHTPTSRDTPPSRNTLPPPWMLPSPRTLPSPRTLPSPRTLPTPGTHFYL :: : : .: . ::. ::: : : : : . : : : :: gi|971 PP--PGPPPP-GPAPPGARPPPG----PPPPGPPPPGPAP-PGARPPPGP-PPPGPP--P 300 310 320 330 340 110 120 130 140 150 160 FLJ002 PGHSPLLGHTSPSWDTLPPPGTHFPLQGHTSPSWDILPTPGMLPSPRTLPAPRTHSYFLG :: .: .. :. :::: : : . :. : :: : : : : : gi|971 PGPAPPGARPPPGP---PPPGP--PPPGPAPPG--ARPPPG--PPPPGPPPPGPAPP--G 350 360 370 380 390 170 180 190 200 210 220 FLJ002 RSPFPGHSPLLGHYPLPGHTPRYRDTPPSRDTPPSRDIPLSLDAPLSLDTPYSRDTLPAT : :: : : :: .: :: :: : : . :: : : : .. :: gi|971 ARPPPGPPP--PGPPPPGPAPPGARPPP--PPPPPADEPQQGPAP-SGDKPKKKPPPPAG 400 410 420 430 440 230 240 250 260 270 280 FLJ002 GTLPPPRTLPSPGTLPPSGTLPPPGTVPTPGTLPSPGTLPAPRTLPTPGTLPSPRTLPTP ::: :::: :: :. :::: : :: : :: : : . : :: : : : : gi|971 ---PPPPGPPSPGPAPP-GARPPPGP-PPPGP-PPPGPAP-PGARPPPG--PPPPGPPPP 450 460 470 480 490 290 300 310 320 330 340 FLJ002 RTLPTPGTLPRPGTSYVLYGTVGGRAWGLSFPPSLIRRCTMRGLSVAFREVMGCRWRFGG : ::. : :: gi|971 GPAP-PGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPG 500 510 520 530 540 550 440 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Sat Feb 28 06:03:38 2009 done: Sat Feb 28 06:10:06 2009 Total Scan time: 878.250 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]