# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh01962.fasta.huge -Q ../query/FLJ00131.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00131, 173 aa vs ./tmplib.10216 library 2210821 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.7478+/-0.00475; mu= 14.9071+/- 0.321 mean_var=137.4697+/-30.463, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.109388 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0522 ( 1555 res) hg01393 (1555) 118 29.6 0.79 FLJ00091 ( 170 res) as00091 ( 170) 97 24.8 2.5 KIAA1330 ( 945 res) fh15188 ( 945) 105 27.2 2.5 KIAA1784 ( 1167 res) fh08226 (1167) 103 27.1 3.5 KIAA1768 ( 1207 res) ph00672(revised) (1207) 101 26.8 4.5 KIAA1755 ( 1110 res) fg04230(revised) (1110) 100 26.6 4.8 KIAA0347 ( 1281 res) hg01528(revised) (1281) 100 26.7 5.1 KIAA0641 ( 1326 res) hj03494s1 (1326) 100 26.7 5.2 KIAA1535 ( 711 res) fk12792 ( 711) 96 25.6 5.9 KIAA1804 ( 490 res) fj22769 ( 490) 93 24.9 6.7 FLJ00385 ( 509 res) sj03289 ( 509) 93 24.9 6.8 KIAA0681 ( 538 res) hk02748 ( 538) 93 25.0 7 KIAA0150 ( 944 res) ha01348 ( 944) 94 25.5 8.5 FLJ00084 ( 641 res) as00084 ( 641) 92 24.9 8.6 KIAA0473 ( 937 res) hh00220 ( 937) 93 25.3 9.4 FLJ00003 ( 235 res) as00003 ( 235) 86 23.3 9.9 KIAA1133 ( 891 res) hg03758b ( 891) 92 25.1 10 FLJ00043 ( 1415 res) as00043 (1415) 94 25.8 10 KIAA1217 ( 1339 res) fh03001s1 (1339) 92 25.4 13 KIAA1115 ( 895 res) hk05464 ( 895) 90 24.8 13 FLJ00070 ( 1382 res) as00070 (1382) 92 25.4 13 FLJ00182 ( 938 res) sj01566 ( 938) 90 24.9 13 FLJ00018 ( 1430 res) as00018 (1430) 90 25.2 16 KIAA0775 ( 639 res) hk05255 ( 639) 86 24.0 17 KIAA1236 ( 1840 res) pg00641 (1840) 91 25.5 17 KIAA1776 ( 2816 res) fh11044s3 (2816) 93 26.1 17 FLJ00328 ( 238 res) sj02853 ( 238) 81 22.5 17 KIAA1148 ( 543 res) bg00390 ( 543) 84 23.5 19 KIAA0537 ( 698 res) hg03925 ( 698) 85 23.9 19 KIAA1737 ( 400 res) pj00125 ( 400) 82 23.0 20 KIAA0672 ( 824 res) hk02382 ( 824) 85 24.0 21 KIAA1185 ( 403 res) hg02311a ( 403) 81 22.9 23 FLJ00134 ( 341 res) sh02437 ( 341) 80 22.6 23 KIAA1743 ( 1036 res) pj01380s1 (1036) 85 24.1 24 KIAA1993 ( 532 res) bg00180 ( 532) 81 23.1 26 FLJ00395 ( 1105 res) sj06062 (1105) 84 24.0 27 KIAA1938 ( 1376 res) hg00912s1 (1376) 85 24.3 27 KIAA0945 ( 797 res) hj04760 ( 797) 82 23.5 29 KIAA1149 ( 532 res) fg04087 ( 532) 80 22.9 29 KIAA1802 ( 821 res) fj21631 ( 821) 82 23.5 29 KIAA1683 ( 832 res) fh24307 ( 832) 82 23.5 29 KIAA2010 ( 920 res) fj14762 ( 920) 82 23.6 31 KIAA1567 ( 924 res) fh22119 ( 924) 82 23.6 31 KIAA1572 ( 492 res) fh23424 ( 492) 79 22.7 31 KIAA0616 ( 634 res) hg03623 ( 634) 80 23.0 32 KIAA0029 ( 974 res) ha00566 ( 974) 82 23.6 32 FLJ00198 ( 677 res) sj03504 ( 677) 80 23.1 33 KIAA0749 ( 678 res) hk04328 ( 678) 80 23.1 33 FLJ00361 ( 366 res) sh04352 ( 366) 77 22.2 33 FLJ00375 ( 708 res) sh07824 ( 708) 80 23.1 33 >>KIAA0522 ( 1555 res) hg01393 (1555 aa) initn: 45 init1: 45 opt: 118 Z-score: 108.2 bits: 29.6 E(): 0.79 Smith-Waterman score: 118; 30.827% identity (52.632% similar) in 133 aa overlap (19-145:269-389) 10 20 30 40 FLJ001 LYSRSCCFASVSGGWCLVKGDCSRSARLGSWPKRGGWDTGGGKRQCEP .:. ::.: .: : :: : . . KIAA05 GREAGPAHPGREKEAGYSAAVGVGPRPPRERGQLSRGASRSSSPGAGG----GHSTSTST 240 250 260 270 280 290 50 60 70 80 90 100 FLJ001 GPQDKVQKASPRELSPNVCPSHSSGGA---IRVKYPSGVPRVLPY--AWFPTTSTRLG-P .: .:. : : : .: .. :. : :.. : :: . .: .:...: : KIAA05 SPATTLQRKSDGENSRTVSVEGDAPGSDLSTAVDSPGSQP---PYRLSQLPPSSSHMGGP 300 310 320 330 340 350 110 120 130 140 150 160 FLJ001 PAGGGAEFLSGAQRAVEAQKPSFQERGHDGEVVGQERDALQESLPEVTLFSSAATDGPTH ::: : : :::: . : : : .. : . . . ::..: KIAA05 PAGVG---LPWAQRA-RLQPASVALRKQEEEEIKRSK-ALSDSYELSTDLQDKKVEMLER 360 370 380 390 400 170 FLJ001 LHLFSDHLKLT KIAA05 KYGGSFLSRRAARTIQTAFRQYRMNKNFERLRSSASESRMSRRIILSNMRMQFSFEEYEK 410 420 430 440 450 460 >>FLJ00091 ( 170 res) as00091 (170 aa) initn: 58 init1: 58 opt: 97 Z-score: 99.2 bits: 24.8 E(): 2.5 Smith-Waterman score: 97; 27.083% identity (51.042% similar) in 96 aa overlap (13-102:17-110) 10 20 30 40 50 FLJ001 LYSRSCCFASVSGGWCL----VKGDCSRSARLGSWPKRGGWDTGGGKRQCEPGPQD :. :: .: .:... :. : ::::. .::: FLJ000 QPLCAHHLWGRCERREGSGCLAADNMKTSCDENRGTGAGPAAPRTRTGGGHGAPDPGPAL 10 20 30 40 50 60 60 70 80 90 100 110 FLJ001 KVQKASPRELSPNVCPSHSSGG--AIRVKYPSGVPRVLPYAWFPTTSTRLGPPAGGGAEF . . . .:. . :.:: :. ...: :: : . .: . :: FLJ000 GAADPACHCRDPGGVSTSSDGGHRALVLHHPLWVPGV--WLHLPGDCEQGGPRWCWGDHA 70 80 90 100 110 120 130 140 150 160 170 FLJ001 LSGAQRAVEAQKPSFQERGHDGEVVGQERDALQESLPEVTLFSSAATDGPTHLHLFSDHL FLJ000 GCVAPGTWHPAMGPCSPGPLGNPEQHLSHPGRLWGQQPLRQHHLLLQVCVLP 120 130 140 150 160 170 >>KIAA1330 ( 945 res) fh15188 (945 aa) initn: 100 init1: 65 opt: 105 Z-score: 99.1 bits: 27.2 E(): 2.5 Smith-Waterman score: 106; 25.564% identity (51.128% similar) in 133 aa overlap (32-164:45-163) 10 20 30 40 50 60 FLJ001 YSRSCCFASVSGGWCLVKGDCSRSARLGSWPKRGGWDTGGGKRQCEPGPQDKVQKASPRE :..:. . ::.: :. :::.. . .: KIAA13 SEEAVVTASRNHEQTVLGPLSGNLMLPAQPPHEGSVEQVGGER-CR-GPQSSGPVEAKQE 20 30 40 50 60 70 70 80 90 100 110 120 FLJ001 LSPNVCPSHSSGGAIRVKYPSGVPRVLPYAWFPTTSTRLGPPAGGGAEFLSGAQRAVEAQ :: ::.. :.. .: : . :: . : .: :... .: . KIAA13 DSPFQCPKEERPGGVPCMDQGGCPLAGLSQEVPTMPSL--PGTG-----LTASPKAGPCS 80 90 100 110 120 130 140 150 160 170 FLJ001 KPSFQERGHDGEVVGQERDALQESLPEVTLFSSAATDGPTHLHLFSDHLKLT :. :. : . . .: ..:. : : . : . ::. : KIAA13 TPTSQH-GSTATFLPSEDQVLMSSAPTLHL----GLGTPTQSHPPETMATSSEGACAQVP 130 140 150 160 170 180 KIAA13 DVEGRTPGPRSCDPGLIDSLKNYLLLLLKLSSTETSGAGGESQVGAATGGLVPSATLTPT 190 200 210 220 230 240 >>KIAA1784 ( 1167 res) fh08226 (1167 aa) initn: 97 init1: 48 opt: 103 Z-score: 96.5 bits: 27.1 E(): 3.5 Smith-Waterman score: 103; 25.439% identity (52.632% similar) in 114 aa overlap (21-129:297-402) 10 20 30 40 50 FLJ001 LYSRSCCFASVSGGWCLVKGDCSRSARLGSWPKRGGWDTGGGKRQCEPGP ::. . :: :. : .: .: . KIAA17 QHSGARGAEAPEQEAPEEMLGHSSCSSPSRDCQAERKEGSLPHS---DDAGDYEQLFSST 270 280 290 300 310 320 60 70 80 90 100 FLJ001 QDKVQKASPRELSPNVCPSHSSGGAIRVKYPSGVPRVLPYAWFPTTSTR--LGPPAGG-- : .... : ... . : ..:: :.: . :. :. : : :::: :: KIAA17 QGEISE--PSQITSE--PEEQSG-AVRERGLEVSHRLAPWQASPPHPCRFLLGPPQGGSP 330 340 350 360 370 110 120 130 140 150 160 FLJ001 -GAEFLSGAQRAVEAQKPSFQERGHDGEVVGQERDALQESLPEVTLFSSAATDGPTHLHL :.. ::.. .. .. . .. : KIAA17 RGSHHTSGSSLSTPRSRGGTSQVGSPTLLSPAVPSKQKRDRSILTLSKEPGHQKGKERRS 380 390 400 410 420 430 >>KIAA1768 ( 1207 res) ph00672(revised) (1207 aa) initn: 94 init1: 69 opt: 101 Z-score: 94.7 bits: 26.8 E(): 4.5 Smith-Waterman score: 101; 31.356% identity (53.390% similar) in 118 aa overlap (49-160:206-317) 20 30 40 50 60 70 FLJ001 KGDCSRSARLGSWPKRGGWDTGGGKRQCEPGPQDKVQKASPREL-SP-NVCPSHSSGGAI : . :...: :: .: :. : . : KIAA17 CEEKLQLTSSCRVCRSLSAVGRRVLSIESFGALQDVSESSWRERPAPGNAGPRRPPGD-- 180 190 200 210 220 230 80 90 100 110 120 130 FLJ001 RVKYPSGVPRVLPYAWFPTTSTRLGPPAGGGAEFLSGAQRAVEAQ-KPSFQERGHDGE-V :: :.::: : . : :: :. .:: : :.. . .. :.: . KIAA17 ----PSTDPEVLPTPEGPESETSRGPRASPTKALLSTPVRNGESHSREGLAGLVLDAERT 240 250 260 270 280 140 150 160 170 FLJ001 VGQ-ERDALQES-LPEVTLFSSAATDGPTHLHLFSDHLKLT .:. .::::..: : .: : .:.: KIAA17 LGELDRDALRRSRLRKVQTFPRLLSDSPEATLCLPLTRGKSQLPISELFSPDPRKAFLDR 290 300 310 320 330 340 >>KIAA1755 ( 1110 res) fg04230(revised) (1110 aa) initn: 36 init1: 36 opt: 100 Z-score: 94.2 bits: 26.6 E(): 4.8 Smith-Waterman score: 100; 35.556% identity (54.444% similar) in 90 aa overlap (45-129:322-405) 20 30 40 50 60 70 FLJ001 WCLVKGDCSRSARLGSWPKRGGWDTGGGKRQCEPGPQDKVQKASPRELSPNVCPSHSSGG : .:::. : .::: ::: . .: KIAA17 DCASGLRAGVSQEPAASKMQGPLGNPENMVQLRPGPR---QASSPR-LSPASPAAAASET 300 310 320 330 340 80 90 100 110 120 FLJ001 AIRVKYP--SG-VPRVLPYAWFPTTSTRLGPPAGGGA-EFLSGA-QRAVEAQKPSFQERG :.:: .: .:. .: :.: . ::. : :: : : .: .: :.:. : KIAA17 KIEVKTKERNGRLPKPMPCPSRNTSSPE--PPTPGLKFSFLRGQRQPSVTPEKASLQHNG 350 360 370 380 390 400 130 140 150 160 170 FLJ001 HDGEVVGQERDALQESLPEVTLFSSAATDGPTHLHLFSDHLKLT KIAA17 PWKVLCSLYSPKPNRAKSLGKAGTTQTKTSGPATAPSPLTEEKAALPEASAGSPERGPTL 410 420 430 440 450 460 >>KIAA0347 ( 1281 res) hg01528(revised) (1281 aa) initn: 93 init1: 65 opt: 100 Z-score: 93.6 bits: 26.7 E(): 5.1 Smith-Waterman score: 100; 28.431% identity (48.039% similar) in 102 aa overlap (32-125:830-922) 10 20 30 40 50 FLJ001 YSRSCCFASVSGGWCLVKGDCSRSARLGSWPKRGGWDTG-GGKRQCEPGPQDKVQKA--S :. .. .:: :: . .: : .. . : KIAA03 TAPGLRNTSGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGPVSARP-PLVGLNATAWS 800 810 820 830 840 850 60 70 80 90 100 110 FLJ001 PRELSPNVCPSHSSGGAIRVKYPSGVPRVLPYAWFPTTSTRLGPPAGGGAEFLSGA---- : . : . ::. : .:. :: . ::. .: .::: : : : KIAA03 PSDTSQSSCPA--------VPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVD 860 870 880 890 900 910 120 130 140 150 160 170 FLJ001 -QRAVEAQKPSFQERGHDGEVVGQERDALQESLPEVTLFSSAATDGPTHLHLFSDHLKLT :. .: : : KIAA03 LQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASA 920 930 940 950 960 970 >>KIAA0641 ( 1326 res) hj03494s1 (1326 aa) initn: 49 init1: 49 opt: 100 Z-score: 93.5 bits: 26.7 E(): 5.2 Smith-Waterman score: 100; 25.949% identity (51.266% similar) in 158 aa overlap (6-149:693-838) 10 20 30 FLJ001 LYSRSCC--FASVSGGWCLVKGDCSRSARLGSWPK :: . . .. :. . : . :: . KIAA06 PKQTPRASPEPGYPGEPLLGLQAASAQEPGCCPGLPHLCSAQGLAPAPCLVTP---SWTE 670 680 690 700 710 40 50 60 70 80 90 FLJ001 RGGWDTGGGKRQCEPGPQDKVQKAS-PRELSPNVCPSHSSGGAIRVKYPSGVPRVLPYAW .. .:: . : :: ... .. :: :.: :: :. :: . ...: . : : KIAA06 TAS--SGGDHPQAEPKLATEAEGTTGPRLPLPSV-PSPSQEGAPLPSEEASAPDA-PDA- 720 730 740 750 760 770 100 110 120 130 140 FLJ001 FPTTSTRLGPPAGGG-------AEFLSGAQRAVEAQKPSFQER----GHDGEVVGQERDA .: . : :: :: : :.:.. . :.. :: ... . .: . :. KIAA06 LPDSPT----PATGGEVSAIKLASALNGSSSSPEVEAPSSEDEDTAEATSGIFTDTSSDG 780 790 800 810 820 830 150 160 170 FLJ001 LQESLPEVTLFSSAATDGPTHLHLFSDHLKLT :: :.: KIAA06 LQARRPDVVPAFRSLQKQVGTPDSLDSLDIPSSASDGGYEVFSPSATGPSGGQPRALDSG 840 850 860 870 880 890 >>KIAA1535 ( 711 res) fk12792 (711 aa) initn: 119 init1: 89 opt: 96 Z-score: 92.6 bits: 25.6 E(): 5.9 Smith-Waterman score: 96; 33.333% identity (62.963% similar) in 54 aa overlap (100-153:631-683) 70 80 90 100 110 120 FLJ001 HSSGGAIRVKYPSGVPRVLPYAWFPTTSTRLGPPAGGGAEFLSGAQRAVEAQKPSFQERG :::: :::.. :. : . :..::. .:. KIAA15 PWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGGGGRRLGPRGRPLSASQPSLPQRA 610 620 630 640 650 660 130 140 150 160 170 FLJ001 HDGEVVGQERDALQESLPEVTLFSSAATDGPTHLHLFSDHLKLT :. .. . .: :: :.. KIAA15 -TGDGSPGRKGTGSERLPPSGLLAKPPRTAQPPRPPVPEPATPRGLQLSANM 670 680 690 700 710 >>KIAA1804 ( 490 res) fj22769 (490 aa) initn: 67 init1: 41 opt: 93 Z-score: 91.5 bits: 24.9 E(): 6.7 Smith-Waterman score: 93; 26.471% identity (56.863% similar) in 102 aa overlap (48-140:375-464) 20 30 40 50 60 70 FLJ001 VKGDCSRSARLGSWPKRGGWDTGGGKRQCEPGPQDKVQKASPRELSPNVCPSHSSGGAIR :.:.... :::.::. .::. . KIAA18 RRTMSDGNPTPTGATIISATGASALPLCPSPAPHSHL----PREVSPK---KHSTVHIVP 350 360 370 380 390 80 90 100 110 120 FLJ001 VKYP------SGVPRVLPY---AWFPTTSTRLGPPAGGGAEFLSGAQRAVEAQKPSFQER . : : .:.. : . . :. .: :. ..::.. .:. ... ::. KIAA18 QRRPASLRSRSDLPQAYPQTAVSQLAQTACVVGRPGPHPTQFLAAKERT-KSHVPSLL-- 400 410 420 430 440 450 130 140 150 160 170 FLJ001 GHDGEVVGQERDALQESLPEVTLFSSAATDGPTHLHLFSDHLKLT :..: :: :: KIAA18 --DADVEGQSRDYTVPLCRMRSKTSRPSIYELEKEFLS 460 470 480 490 173 residues in 1 query sequences 2210821 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:40:31 2009 done: Fri Feb 27 10:40:32 2009 Total Scan time: 0.350 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]