# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sh02369.fasta.nr -Q ../query/FLJ00286.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00286, 576 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826167 sequences Expectation_n fit: rho(ln(x))= 4.8173+/-0.000185; mu= 14.1662+/- 0.010 mean_var=73.4016+/-14.596, 0's: 38 Z-trim: 43 B-trim: 5926 in 2/62 Lambda= 0.149700 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|34526515|dbj|BAC85135.1| FLJ00286 protein [Homo ( 576) 3971 867.1 0 gi|172046188|sp|Q6ZNL0.2|YP009_HUMAN RecName: Full ( 789) 3435 751.5 2.1e-214 gi|34526513|dbj|BAC85134.1| FLJ00285 protein [Homo ( 829) 3432 750.9 3.5e-214 gi|194380326|dbj|BAG63930.1| unnamed protein produ ( 800) 3313 725.1 1.8e-206 gi|34533429|dbj|BAC86699.1| unnamed protein produc ( 556) 1656 367.1 7.6e-99 gi|34530319|dbj|BAC85871.1| unnamed protein produc ( 567) 1655 366.9 9e-99 gi|194388012|dbj|BAG65390.1| unnamed protein produ ( 341) 1647 365.0 2.1e-98 gi|3522923|gb|AAC34211.1| PKD1 [Homo sapiens] (1339) 1644 364.9 8.6e-98 gi|790819|gb|AAB59488.1| polycystic kidney disease (3638) 1644 365.3 1.8e-97 gi|903758|gb|AAC41765.1| polycystic kidney disease (4292) 1644 365.4 2e-97 gi|904223|gb|AAC37576.1| polycystic kidney disease (4302) 1644 365.4 2e-97 gi|119605960|gb|EAW85554.1| polycystic kidney dise (4302) 1644 365.4 2e-97 gi|45645177|sp|P98161.2|PKD1_HUMAN RecName: Full=P (4303) 1644 365.4 2e-97 gi|119605959|gb|EAW85553.1| polycystic kidney dise (4303) 1644 365.4 2e-97 gi|799335|gb|AAC50128.1| autosomal dominant polycy (4303) 1644 365.4 2e-97 gi|114664863|ref|XP_001167435.1| PREDICTED: polycy ( 579) 1617 358.7 2.7e-96 gi|1586345|prf||2203412A polycystin (4302) 1625 361.3 3.4e-96 gi|47077679|dbj|BAD18720.1| FLJ00322 protein [Homo ( 659) 1575 349.7 1.6e-93 gi|109127236|ref|XP_001083558.1| PREDICTED: polycy (3209) 1570 349.3 1e-92 gi|114661156|ref|XP_523302.2| PREDICTED: polycysti ( 423) 1545 343.1 1e-91 gi|194381946|dbj|BAG64342.1| unnamed protein produ ( 318) 1499 333.0 8.2e-89 gi|194219363|ref|XP_001915208.1| PREDICTED: simila (4194) 1493 332.7 1.3e-87 gi|73958423|ref|XP_855604.1| PREDICTED: hypothetic (1882) 1472 327.9 1.7e-86 gi|20514243|gb|AAM22956.1| polycystin-1 [Canis fam (4256) 1472 328.2 3e-86 gi|31321927|gb|AAM45378.1| polycystin 1; polycysti (4311) 1468 327.4 5.6e-86 gi|2342742|gb|AAC05437.1| Unknown protein product ( 232) 1410 313.7 4e-83 gi|112180455|gb|AAH39707.1| LOC339047 protein [Hom ( 232) 1410 313.7 4e-83 gi|149052028|gb|EDM03845.1| rCG34128 [Rattus norve (3865) 1411 315.0 2.6e-82 gi|11320978|gb|AAG33986.1| Pkd1 [Rattus norvegicus (4283) 1411 315.0 2.8e-82 gi|74196135|dbj|BAE32984.1| unnamed protein produc (1479) 1403 312.9 4.3e-82 gi|148690393|gb|EDL22340.1| polycystic kidney dise (4293) 1403 313.3 9.3e-82 gi|81861038|sp|O08852.1|PKD1_MOUSE RecName: Full=P (4293) 1403 313.3 9.3e-82 gi|124487380|ref|NP_038658.2| polycystin 1 [Mus mu (4293) 1403 313.3 9.3e-82 gi|126335532|ref|XP_001366936.1| PREDICTED: simila (4381) 1380 308.4 3e-80 gi|4959568|gb|AAD34394.1|AF132984_1 nuclear pore c ( 350) 1299 289.8 8.8e-76 gi|148596994|ref|NP_008916.2| nuclear pore complex ( 350) 1296 289.2 1.4e-75 gi|205371808|sp|Q9UND3.2|NPIP_HUMAN RecName: Full= ( 350) 1285 286.8 7.2e-75 gi|74727564|sp|Q86VD5.1|NPIL1_HUMAN RecName: Full= ( 369) 1285 286.8 7.5e-75 gi|118097923|ref|XP_414854.2| PREDICTED: similar t (4345) 1234 276.8 9.1e-71 gi|169209802|ref|XP_001723065.1| PREDICTED: simila ( 232) 1143 256.0 9.1e-66 gi|50512168|gb|AAT77543.1| polycystic kidney disea (3434) 1114 250.8 4.9e-63 gi|169212910|ref|XP_001720961.1| PREDICTED: simila ( 236) 1083 243.0 7.3e-62 gi|206557807|sp|A8MZ50.1|NPPL3_HUMAN RecName: Full ( 328) 1070 240.4 6.5e-61 gi|169246006|gb|ACA51017.1| polycystin 1 [Felis ca ( 186) 1051 236.0 7.4e-60 gi|76879887|dbj|BAE45761.1| putative protein produ ( 158) 1036 232.7 6.2e-59 gi|169209800|ref|XP_001723068.1| PREDICTED: simila ( 382) 1021 229.8 1.1e-57 gi|190360008|sp|A6NJ64.3|NPIL2_HUMAN RecName: Full ( 380) 989 222.9 1.3e-55 gi|169212906|ref|XP_001720962.1| PREDICTED: simila ( 363) 961 216.9 8.5e-54 gi|209837720|dbj|BAG75152.1| polycystin 1 [Oryzias (4596) 961 217.9 5.3e-53 gi|205831171|sp|A6NHP6.2|YR011_HUMAN RecName: Full ( 327) 944 213.1 1e-52 >>gi|34526515|dbj|BAC85135.1| FLJ00286 protein [Homo sap (576 aa) initn: 3971 init1: 3971 opt: 3971 Z-score: 4632.7 bits: 867.1 E(): 0 Smith-Waterman score: 3971; 100.000% identity (100.000% similar) in 576 aa overlap (1-576:1-576) 10 20 30 40 50 60 FLJ002 ADSGCKLHRHADMCCVPGDLHGHGRHPAQAGPVGCQPGPRHPLLWAAGPLQVRRSSVKTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 ADSGCKLHRHADMCCVPGDLHGHGRHPAQAGPVGCQPGPRHPLLWAAGPLQVRRSSVKTG 10 20 30 40 50 60 70 80 90 100 110 120 FLJ002 WGPGAQVTRAHVGIMLYGVDSRSGHRHLDGDRPFHPNSLDIFRIPTPHSLGSVWKIRVWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 WGPGAQVTRAHVGIMLYGVDSRSGHRHLDGDRPFHPNSLDIFRIPTPHSLGSVWKIRVWH 70 80 90 100 110 120 130 140 150 160 170 180 FLJ002 DKGLSPAWFLQHVIVRDLQTAHSTFFLVNDWLSVETEPNGGLVEKEVLAASHAALLRFRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 DKGLSPAWFLQHVIVRDLQTAHSTFFLVNDWLSVETEPNGGLVEKEVLAASHAALLRFRR 130 140 150 160 170 180 190 200 210 220 230 240 FLJ002 LLVAELQCGFFDKHIWLSIWDRPPRSCFTRIQRATCCVLLICLFLGANAVWYGAVGDSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 LLVAELQCGFFDKHIWLSIWDRPPRSCFTRIQRATCCVLLICLFLGANAVWYGAVGDSAY 190 200 210 220 230 240 250 260 270 280 290 300 FLJ002 STGHVSRLSPLSVDTVAVGLVSSVVVYPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 STGHVSRLSPLSVDTVAVGLVSSVVVYPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDI 250 260 270 280 290 300 310 320 330 340 350 360 FLJ002 DSCLDSSVLDSSFLTFSGLHAEVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 DSCLDSSVLDSSFLTFSGLHAEVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLC 310 320 330 340 350 360 370 380 390 400 410 420 FLJ002 TTYLWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLCVSFLKTIFPSQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 TTYLWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLCVSFLKTIFPSQN 370 380 390 400 410 420 430 440 450 460 470 480 FLJ002 GHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 GHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKI 430 440 450 460 470 480 490 500 510 520 530 540 FLJ002 NGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 NGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAE 490 500 510 520 530 540 550 560 570 FLJ002 DYYRCKITPSARKPLCNRCTYNLVLPGSEKKYYSHA :::::::::::::::::::::::::::::::::::: gi|345 DYYRCKITPSARKPLCNRCTYNLVLPGSEKKYYSHA 550 560 570 >>gi|172046188|sp|Q6ZNL0.2|YP009_HUMAN RecName: Full=GPS (789 aa) initn: 3395 init1: 3395 opt: 3435 Z-score: 4005.3 bits: 751.5 E(): 2.1e-214 Smith-Waterman score: 3435; 98.077% identity (98.654% similar) in 520 aa overlap (57-576:271-789) 30 40 50 60 70 80 FLJ002 PAQAGPVGCQPGPRHPLLWAAGPLQVRRSSVKTGWGPGAQVTRAHVGIMLYGVDSRSGHR :::::: :. .: ::::::::::::::::: gi|172 ILHKLDQLDASRGRAIPFCGQRGRFKYEILVKTGWGRGSGTT-AHVGIMLYGVDSRSGHR 250 260 270 280 290 90 100 110 120 130 140 FLJ002 HLDGDRPFHPNSLDIFRIPTPHSLGSVWKIRVWHDKGLSPAWFLQHVIVRDLQTAHSTFF :::::: :: :::::::: :::::::::::::::::::::::::::::.::::::::::: gi|172 HLDGDRAFHRNSLDIFRIATPHSLGSVWKIRVWHDKGLSPAWFLQHVIIRDLQTAHSTFF 300 310 320 330 340 350 150 160 170 180 190 200 FLJ002 LVNDWLSVETEPNGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPRS ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|172 LVNDWLSVETEANGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPRS 360 370 380 390 400 410 210 220 230 240 250 260 FLJ002 CFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 CFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVVV 420 430 440 450 460 470 270 280 290 300 310 320 FLJ002 YPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVINT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 YPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVINT 480 490 500 510 520 530 330 340 350 360 370 380 FLJ002 LADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 LADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPWL 540 550 560 570 580 590 390 400 410 420 430 440 FLJ002 LIITVFLRSYKFAISLCTTYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 LIITVFLRSYKFAISLCTTYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIV 600 610 620 630 640 650 450 460 470 480 490 500 FLJ002 LEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 LEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKER 660 670 680 690 700 710 510 520 530 540 550 560 FLJ002 QVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRCTYNLVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 QVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRCTYNLVLP 720 730 740 750 760 770 570 FLJ002 GSEKKYYSHA :::::::::: gi|172 GSEKKYYSHA 780 >>gi|34526513|dbj|BAC85134.1| FLJ00285 protein [Homo sap (829 aa) initn: 3392 init1: 3392 opt: 3432 Z-score: 4001.5 bits: 750.9 E(): 3.5e-214 Smith-Waterman score: 3432; 98.077% identity (98.654% similar) in 520 aa overlap (57-576:311-829) 30 40 50 60 70 80 FLJ002 PAQAGPVGCQPGPRHPLLWAAGPLQVRRSSVKTGWGPGAQVTRAHVGIMLYGVDSRSGHR :::::: :. .: ::::::::::::::::: gi|345 ILHKLDQLDASRGRAIPFCGQRGRFKYEILVKTGWGRGSGTT-AHVGIMLYGVDSRSGHR 290 300 310 320 330 90 100 110 120 130 140 FLJ002 HLDGDRPFHPNSLDIFRIPTPHSLGSVWKIRVWHDKGLSPAWFLQHVIVRDLQTAHSTFF :::::: :: :::::::: ::::::::::::::::::::::::::::::::::::::::: gi|345 HLDGDRAFHRNSLDIFRIATPHSLGSVWKIRVWHDKGLSPAWFLQHVIVRDLQTAHSTFF 340 350 360 370 380 390 150 160 170 180 190 200 FLJ002 LVNDWLSVETEPNGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPRS ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|345 LVNDWLSVETEANGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPRS 400 410 420 430 440 450 210 220 230 240 250 260 FLJ002 CFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 CFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVVV 460 470 480 490 500 510 270 280 290 300 310 320 FLJ002 YPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVINT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 YPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVINT 520 530 540 550 560 570 330 340 350 360 370 380 FLJ002 LADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 LADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPWL 580 590 600 610 620 630 390 400 410 420 430 440 FLJ002 LIITVFLRSYKFAISLCTTYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 LIITVFLRSYKFAISLCTTYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIV 640 650 660 670 680 690 450 460 470 480 490 500 FLJ002 LEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKER :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|345 LEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKKKTAKEHLRKLSMKEREHGEKER 700 710 720 730 740 750 510 520 530 540 550 560 FLJ002 QVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRCTYNLVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 QVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRCTYNLVLP 760 770 780 790 800 810 570 FLJ002 GSEKKYYSHA :::::::::: gi|345 GSEKKYYSHA 820 >>gi|194380326|dbj|BAG63930.1| unnamed protein product [ (800 aa) initn: 3629 init1: 3269 opt: 3313 Z-score: 3862.8 bits: 725.1 E(): 1.8e-206 Smith-Waterman score: 3313; 97.041% identity (98.225% similar) in 507 aa overlap (57-563:271-776) 30 40 50 60 70 80 FLJ002 PAQAGPVGCQPGPRHPLLWAAGPLQVRRSSVKTGWGPGAQVTRAHVGIMLYGVDSRSGHR :::::: :. .: ::::::::::::::::: gi|194 ILHKLDQLDASRGRAIPFCGQRGRFKYEILVKTGWGRGSGTT-AHVGIMLYGVDSRSGHR 250 260 270 280 290 90 100 110 120 130 140 FLJ002 HLDGDRPFHPNSLDIFRIPTPHSLGSVWKIRVWHDKGLSPAWFLQHVIVRDLQTAHSTFF :::::: :: :::::::: :::::::::::::::::::::::::::::.::::::::::: gi|194 HLDGDRAFHRNSLDIFRIATPHSLGSVWKIRVWHDKGLSPAWFLQHVIIRDLQTAHSTFF 300 310 320 330 340 350 150 160 170 180 190 200 FLJ002 LVNDWLSVETEPNGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPRS ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LVNDWLSVETEANGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPRS 360 370 380 390 400 410 210 220 230 240 250 260 FLJ002 CFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 CFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVVV 420 430 440 450 460 470 270 280 290 300 310 320 FLJ002 YPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVINT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVINT 480 490 500 510 520 530 330 340 350 360 370 380 FLJ002 LADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPWL 540 550 560 570 580 590 390 400 410 420 430 440 FLJ002 LIITVFLRSYKFAISLCTTYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LIITVFLRSYKFAISLCTTYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIV 600 610 620 630 640 650 450 460 470 480 490 500 FLJ002 LEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKER 660 670 680 690 700 710 510 520 530 540 550 560 FLJ002 QVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRCTYNLVLP :::::::::::::::::::::::::::::::::::::::::::::::::::: ... gi|194 QVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRGQFQMRAL 720 730 740 750 760 770 570 FLJ002 GSEKKYYSHA gi|194 NDAQLSWFLCGLCTFKSCRVL 780 790 800 >>gi|34533429|dbj|BAC86699.1| unnamed protein product [H (556 aa) initn: 1323 init1: 1287 opt: 1656 Z-score: 1930.8 bits: 367.1 E(): 7.6e-99 Smith-Waterman score: 1656; 92.910% identity (96.269% similar) in 268 aa overlap (57-323:262-528) 30 40 50 60 70 80 FLJ002 PAQAGPVGCQPGPRHPLLWAAGPLQVRRSSVKTGWGPGAQVTRAHVGIMLYGVDSRSGHR :::::: :. .: ::::::::::::::::: gi|345 ILHKLDQLDASRGCAIPFCGQRGRFKYEILVKTGWGRGSGTT-AHVGIMLYGVDSRSGHR 240 250 260 270 280 290 90 100 110 120 130 140 FLJ002 HLDGDRPFHPNSLDIFRIPTPHSLGSVWKIRVWHD-KGLSPAWFLQHVIVRDLQTAHSTF :::::: :: ::::::.: :::::::.:::::::: :::::::::::.::::::::.::: gi|345 HLDGDRAFHRNSLDIFQIATPHSLGSMWKIRVWHDNKGLSPAWFLQHIIVRDLQTARSTF 300 310 320 330 340 350 150 160 170 180 190 200 FLJ002 FLVNDWLSVETEPNGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPR :::::::::::: ::::::::::::::::::::::::::::: ::::::::::::::::: gi|345 FLVNDWLSVETEANGGLVEKEVLAASHAALLRFRRLLVAELQRGFFDKHIWLSIWDRPPR 360 370 380 390 400 410 210 220 230 240 250 260 FLJ002 SCFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVV ::::::::::::::::::::::::::::::::::::::.::::.:::::::::::::::: gi|345 SCFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGRVSRLNPLSVDTVAVGLVSSVV 420 430 440 450 460 470 270 280 290 300 310 320 FLJ002 VYPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVIN :::::::::::: :::::::::::::::::::::.::::::::::::::::::::::: gi|345 VYPVYLAILFLFRMSRSKVAGSPSPTPAGQQVLDVDSCLDSSVLDSSFLTFSGLHAEVRA 480 490 500 510 520 530 330 340 350 360 370 380 FLJ002 TLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPW gi|345 LLGVLPPWRSLDSRPCAPLSRPLLDR 540 550 >>gi|34530319|dbj|BAC85871.1| unnamed protein product [H (567 aa) initn: 1282 init1: 1282 opt: 1655 Z-score: 1929.5 bits: 366.9 E(): 9e-99 Smith-Waterman score: 1655; 92.910% identity (96.269% similar) in 268 aa overlap (57-323:273-539) 30 40 50 60 70 80 FLJ002 PAQAGPVGCQPGPRHPLLWAAGPLQVRRSSVKTGWGPGAQVTRAHVGIMLYGVDSRSGHR :::::: :. .: ::::::::::::::::: gi|345 ILHKLDQLDASRGCAIPFCGQRGRFKYEILVKTGWGRGSGTT-AHVGIMLYGVDSRSGHR 250 260 270 280 290 300 90 100 110 120 130 140 FLJ002 HLDGDRPFHPNSLDIFRIPTPHSLGSVWKIRVWHD-KGLSPAWFLQHVIVRDLQTAHSTF :::::: :: ::::::.: :::::::::::::::: :::::::::::.::::::::.::: gi|345 HLDGDRAFHRNSLDIFQIATPHSLGSVWKIRVWHDNKGLSPAWFLQHIIVRDLQTARSTF 310 320 330 340 350 360 150 160 170 180 190 200 FLJ002 FLVNDWLSVETEPNGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPR :::::::::::: ::::::::::::::::::::::::::::: ::::::::::::::::: gi|345 FLVNDWLSVETEANGGLVEKEVLAASHAALLRFRRLLVAELQRGFFDKHIWLSIWDRPPR 370 380 390 400 410 420 210 220 230 240 250 260 FLJ002 SCFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVV ::::::::::::::::::::::::::::::::::::::.::::.:::::::::::::::: gi|345 SCFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGRVSRLNPLSVDTVAVGLVSSVV 430 440 450 460 470 480 270 280 290 300 310 320 FLJ002 VYPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVIN ::::::.::::: :::::::::::::::::::::.::::::::::::::::::::::: gi|345 VYPVYLVILFLFRMSRSKVAGSPSPTPAGQQVLDVDSCLDSSVLDSSFLTFSGLHAEVRA 490 500 510 520 530 540 330 340 350 360 370 380 FLJ002 TLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPW gi|345 LLGVLPPWRSLDSRPCAPLSRPLLDR 550 560 >>gi|194388012|dbj|BAG65390.1| unnamed protein product [ (341 aa) initn: 1278 init1: 1278 opt: 1647 Z-score: 1923.1 bits: 365.0 E(): 2.1e-98 Smith-Waterman score: 1647; 92.537% identity (95.896% similar) in 268 aa overlap (57-323:47-313) 30 40 50 60 70 80 FLJ002 PAQAGPVGCQPGPRHPLLWAAGPLQVRRSSVKTGWGPGAQVTRAHVGIMLYGVDSRSGHR :::::: :. .: ::::::::::::::::: gi|194 ILHKLDQLDASRGCAIPFCGQRGRFKYEILVKTGWGRGSGTT-AHVGIMLYGVDSRSGHR 20 30 40 50 60 70 90 100 110 120 130 140 FLJ002 HLDGDRPFHPNSLDIFRIPTPHSLGSVWKIRVWHD-KGLSPAWFLQHVIVRDLQTAHSTF :::::: :: ::::::.: :::::::.:::::::: :::::::::::.::::::::.::: gi|194 HLDGDRAFHRNSLDIFQIATPHSLGSMWKIRVWHDNKGLSPAWFLQHIIVRDLQTARSTF 80 90 100 110 120 130 150 160 170 180 190 200 FLJ002 FLVNDWLSVETEPNGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPR :::::::::::: ::::::::::::::::::::::::::::: ::::::::::::::::: gi|194 FLVNDWLSVETEANGGLVEKEVLAASHAALLRFRRLLVAELQRGFFDKHIWLSIWDRPPR 140 150 160 170 180 190 210 220 230 240 250 260 FLJ002 SCFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVV :::::::::::: :::::::::::::::::::::::::.::::.:::::::::::::::: gi|194 SCFTRIQRATCCDLLICLFLGANAVWYGAVGDSAYSTGRVSRLNPLSVDTVAVGLVSSVV 200 210 220 230 240 250 270 280 290 300 310 320 FLJ002 VYPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVIN :::::::::::: :::::::::::::::::::::.::::::::::::::::::::::: gi|194 VYPVYLAILFLFRMSRSKVAGSPSPTPAGQQVLDVDSCLDSSVLDSSFLTFSGLHAEVRA 260 270 280 290 300 310 330 340 350 360 370 380 FLJ002 TLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPW gi|194 LLGVLPPWRSLDSRPCAPLSRPLLDR 320 330 340 >>gi|3522923|gb|AAC34211.1| PKD1 [Homo sapiens] (1339 aa) initn: 1265 init1: 1265 opt: 1644 Z-score: 1911.9 bits: 364.9 E(): 8.6e-98 Smith-Waterman score: 1644; 94.007% identity (95.506% similar) in 267 aa overlap (57-322:160-425) 30 40 50 60 70 80 FLJ002 PAQAGPVGCQPGPRHPLLWAAGPLQVRRSSVKTGWGPGAQVTRAHVGIMLYGVDSRSGHR :::::: :. .: ::::::::::::::::: gi|352 ILHKLDQLDASRGRAIPFCGQRGRFKYEILVKTGWGRGSGTT-AHVGIMLYGVDSRSGHR 130 140 150 160 170 180 90 100 110 120 130 140 FLJ002 HLDGDRPFHPNSLDIFRIPTPHSLGSVWKIRVWHD-KGLSPAWFLQHVIVRDLQTAHSTF :::::: :: :::::::: :::::::::::::::: ::::::::::::::::::::.:.: gi|352 HLDGDRAFHRNSLDIFRIATPHSLGSVWKIRVWHDNKGLSPAWFLQHVIVRDLQTARSAF 190 200 210 220 230 240 150 160 170 180 190 200 FLJ002 FLVNDWLSVETEPNGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPR :::::::::::: ::::::::::::: ::::::::::::::: ::::::::::::::::: gi|352 FLVNDWLSVETEANGGLVEKEVLAASDAALLRFRRLLVAELQRGFFDKHIWLSIWDRPPR 250 260 270 280 290 300 210 220 230 240 250 260 FLJ002 SCFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVV : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|352 SRFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVV 310 320 330 340 350 360 270 280 290 300 310 320 FLJ002 VYPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVIN :::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|352 VYPVYLAILFLFRMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEQAF 370 380 390 400 410 420 330 340 350 360 370 380 FLJ002 TLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPW gi|352 VGQMKSDLFLDDSKSLVCWPSGEGTLSWPDLLSDPSIVGSNLRQLARGQAGHGLGPEEDG 430 440 450 460 470 480 >>gi|790819|gb|AAB59488.1| polycystic kidney disease-ass (3638 aa) initn: 1319 init1: 1265 opt: 1644 Z-score: 1906.2 bits: 365.3 E(): 1.8e-97 Smith-Waterman score: 1644; 94.007% identity (95.506% similar) in 267 aa overlap (57-322:2460-2725) 30 40 50 60 70 80 FLJ002 PAQAGPVGCQPGPRHPLLWAAGPLQVRRSSVKTGWGPGAQVTRAHVGIMLYGVDSRSGHR :::::: :. .: ::::::::::::::::: gi|790 ILHKLDQLDASRGRAIPFCGQRGRFKYEILVKTGWGRGSGTT-AHVGIMLYGVDSRSGHR 2430 2440 2450 2460 2470 2480 90 100 110 120 130 140 FLJ002 HLDGDRPFHPNSLDIFRIPTPHSLGSVWKIRVWHD-KGLSPAWFLQHVIVRDLQTAHSTF :::::: :: :::::::: :::::::::::::::: ::::::::::::::::::::.:.: gi|790 HLDGDRAFHRNSLDIFRIATPHSLGSVWKIRVWHDNKGLSPAWFLQHVIVRDLQTARSAF 2490 2500 2510 2520 2530 2540 150 160 170 180 190 200 FLJ002 FLVNDWLSVETEPNGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPR :::::::::::: ::::::::::::: ::::::::::::::: ::::::::::::::::: gi|790 FLVNDWLSVETEANGGLVEKEVLAASDAALLRFRRLLVAELQRGFFDKHIWLSIWDRPPR 2550 2560 2570 2580 2590 2600 210 220 230 240 250 260 FLJ002 SCFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVV : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|790 SRFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVV 2610 2620 2630 2640 2650 2660 270 280 290 300 310 320 FLJ002 VYPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVIN :::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|790 VYPVYLAILFLFRMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEAFV 2670 2680 2690 2700 2710 2720 330 340 350 360 370 380 FLJ002 TLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPW gi|790 GQMKSDLFLDDSKSLVCWPSGEGTLSWPDLLSDPSIVGSNLRQLARGQAGHGLGPEEDGF 2730 2740 2750 2760 2770 2780 >>gi|903758|gb|AAC41765.1| polycystic kidney disease 1 p (4292 aa) initn: 1352 init1: 1265 opt: 1644 Z-score: 1905.3 bits: 365.4 E(): 2e-97 Smith-Waterman score: 1644; 94.007% identity (95.506% similar) in 267 aa overlap (57-322:3114-3379) 30 40 50 60 70 80 FLJ002 PAQAGPVGCQPGPRHPLLWAAGPLQVRRSSVKTGWGPGAQVTRAHVGIMLYGVDSRSGHR :::::: :. .: ::::::::::::::::: gi|903 ILHKLDQLDASRGRAIPFCGQRGRFKYEILVKTGWGRGSGTT-AHVGIMLYGVDSRSGHR 3090 3100 3110 3120 3130 3140 90 100 110 120 130 140 FLJ002 HLDGDRPFHPNSLDIFRIPTPHSLGSVWKIRVWHD-KGLSPAWFLQHVIVRDLQTAHSTF :::::: :: :::::::: :::::::::::::::: ::::::::::::::::::::.:.: gi|903 HLDGDRAFHRNSLDIFRIATPHSLGSVWKIRVWHDNKGLSPAWFLQHVIVRDLQTARSAF 3150 3160 3170 3180 3190 3200 150 160 170 180 190 200 FLJ002 FLVNDWLSVETEPNGGLVEKEVLAASHAALLRFRRLLVAELQCGFFDKHIWLSIWDRPPR :::::::::::: ::::::::::::: ::::::::::::::: ::::::::::::::::: gi|903 FLVNDWLSVETEANGGLVEKEVLAASDAALLRFRRLLVAELQRGFFDKHIWLSIWDRPPR 3210 3220 3230 3240 3250 3260 210 220 230 240 250 260 FLJ002 SCFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVV : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 SRFTRIQRATCCVLLICLFLGANAVWYGAVGDSAYSTGHVSRLSPLSVDTVAVGLVSSVV 3270 3280 3290 3300 3310 3320 270 280 290 300 310 320 FLJ002 VYPVYLAILFLFWMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEVIN :::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|903 VYPVYLAILFLFRMSRSKVAGSPSPTPAGQQVLDIDSCLDSSVLDSSFLTFSGLHAEAFV 3330 3340 3350 3360 3370 3380 330 340 350 360 370 380 FLJ002 TLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTTYLWVINTLADHRHRGTDFGGSPW gi|903 GQMKSDLFLDDSKSLVCWPSGEGTLSWPDLLSDPSIVGSNLRQLARGQAGHGLGPEEDGF 3390 3400 3410 3420 3430 3440 576 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 11:26:07 2009 done: Fri Feb 27 11:33:26 2009 Total Scan time: 977.730 Total Display time: 0.210 Function used was FASTA [version 34.26.5 April 26, 2007]