# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sh02993.fasta.nr -Q ../query/FLJ00291.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00291, 159 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7827168 sequences Expectation_n fit: rho(ln(x))= 5.2529+/-0.000181; mu= 6.9238+/- 0.010 mean_var=72.4280+/-14.030, 0's: 37 Z-trim: 38 B-trim: 0 in 0/66 Lambda= 0.150703 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|21748498|dbj|BAC03386.1| FLJ00291 protein [Homo ( 159) 1100 247.3 7e-64 >>gi|21748498|dbj|BAC03386.1| FLJ00291 protein [Homo sap (159 aa) initn: 1100 init1: 1100 opt: 1100 Z-score: 1303.1 bits: 247.3 E(): 7e-64 Smith-Waterman score: 1100; 100.000% identity (100.000% similar) in 159 aa overlap (1-159:1-159) 10 20 30 40 50 60 FLJ002 HARGGPHGSAVSLQLFHGEAKMAELESGGVLTSPPKPNQNFLLGVAIRGPSAGAAGVEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 HARGGPHGSAVSLQLFHGEAKMAELESGGVLTSPPKPNQNFLLGVAIRGPSAGAAGVEGQ 10 20 30 40 50 60 70 80 90 100 110 120 FLJ002 GQALLTWQEAAKETEGRAPRPVQGGNLVPTAPGHTLSLRHPHGPCHPAVERTACLEVTFR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 GQALLTWQEAAKETEGRAPRPVQGGNLVPTAPGHTLSLRHPHGPCHPAVERTACLEVTFR 70 80 90 100 110 120 130 140 150 FLJ002 ALLHREDCELIQFTASGAAGGGCDGGDLRPGGGASLHLI ::::::::::::::::::::::::::::::::::::::: gi|217 ALLHREDCELIQFTASGAAGGGCDGGDLRPGGGASLHLI 130 140 150 159 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 11:53:10 2009 done: Fri Feb 27 11:57:28 2009 Total Scan time: 615.220 Total Display time: 0.000 Function used was FASTA [version 34.26.5 April 26, 2007]