# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sh04156.fasta.nr -Q ../query/FLJ00300.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00300, 283 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7823515 sequences Expectation_n fit: rho(ln(x))= 4.5485+/-0.000185; mu= 11.5864+/- 0.010 mean_var=61.8623+/-12.294, 0's: 33 Z-trim: 43 B-trim: 3244 in 2/64 Lambda= 0.163065 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|21748506|dbj|BAC03390.1| FLJ00300 protein [Homo ( 283) 1921 460.3 1.7e-127 gi|114640742|ref|XP_508787.2| PREDICTED: adhesion ( 446) 1909 457.6 1.7e-126 gi|119587759|gb|EAW67355.1| adhesion molecule, int ( 259) 1748 419.5 2.9e-115 gi|71151910|sp|Q86YT9.1|JAML1_HUMAN RecName: Full= ( 394) 1747 419.5 4.7e-115 gi|57635332|emb|CAD56620.2| putative junctional ad ( 394) 1742 418.3 1.1e-114 gi|194375171|dbj|BAG62698.1| unnamed protein produ ( 344) 1734 416.4 3.5e-114 gi|37543535|gb|AAM15730.1| dendritic-cell specific ( 394) 1734 416.4 3.9e-114 gi|167887476|gb|ACA05929.1| junctional adhesion mo ( 384) 1653 397.3 2.1e-108 gi|21753453|dbj|BAC04347.1| unnamed protein produc ( 384) 1640 394.3 1.7e-107 gi|109108977|ref|XP_001093298.1| PREDICTED: adhesi ( 394) 1619 389.4 5.4e-106 gi|71681555|gb|AAI00798.1| AMICA1 protein [Homo sa ( 355) 1490 359.0 6.9e-97 gi|71680133|gb|AAI00797.1| AMICA1 protein [Homo sa ( 355) 1485 357.8 1.5e-96 gi|72533279|gb|AAI00795.1| AMICA1 protein [Homo sa ( 355) 1477 355.9 5.7e-96 gi|72533454|gb|AAI00796.1| AMICA1 protein [Homo sa ( 305) 1471 354.4 1.4e-95 gi|37543537|gb|AAM15731.1| dendritic-cell specific ( 215) 1438 346.5 2.3e-93 gi|73955078|ref|XP_853431.1| PREDICTED: similar to ( 387) 1286 311.0 2e-82 gi|194212730|ref|XP_001502805.2| PREDICTED: simila ( 402) 1260 304.9 1.5e-80 gi|151553778|gb|AAI49328.1| AMICA1 protein [Bos ta ( 384) 1178 285.6 9e-75 gi|119936579|gb|ABM06153.1| adhesion molecule, int ( 384) 1178 285.6 9e-75 gi|194374775|dbj|BAG62502.1| unnamed protein produ ( 221) 1010 245.9 4.7e-63 gi|109483410|ref|XP_236198.4| PREDICTED: similar t ( 430) 1011 246.4 6.6e-63 gi|160333187|ref|NP_001005421.3| adhesion molecule ( 379) 958 233.8 3.4e-59 gi|71153019|sp|Q80UL9.1|JAML1_MOUSE RecName: Full= ( 379) 957 233.6 4e-59 gi|37543539|gb|AAM15732.1| dendritic-cell specific ( 379) 951 232.2 1.1e-58 gi|148693687|gb|EDL25634.1| adhesion molecule, int ( 269) 920 224.8 1.3e-56 gi|149041509|gb|EDL95350.1| adhesion molecule, int ( 217) 909 222.1 6.6e-56 gi|126326956|ref|XP_001380744.1| PREDICTED: simila ( 366) 558 139.7 7.1e-31 gi|149447094|ref|XP_001519892.1| PREDICTED: simila ( 307) 462 117.1 3.9e-24 gi|193783534|dbj|BAG53445.1| unnamed protein produ ( 204) 456 115.5 7.6e-24 gi|118101993|ref|XP_417915.2| PREDICTED: similar t ( 289) 378 97.3 3.3e-18 gi|117956411|gb|ABK58723.1| coxsackie virus and ad ( 365) 212 58.3 2.2e-06 gi|148689050|gb|EDL20997.1| mCG113820 [Mus musculu ( 264) 209 57.5 2.9e-06 gi|92098422|gb|AAI14987.1| Gene model 1123, (NCBI) ( 390) 209 57.6 3.8e-06 gi|71153253|sp|Q8WMV3.1|CXAR_BOVIN RecName: Full=C ( 365) 207 57.1 5.1e-06 gi|6013137|gb|AAF01256.1| coxsackie-adenovirus-rec ( 319) 201 55.7 1.2e-05 gi|171847144|gb|AAI61571.1| Scn2b protein [Xenopus ( 193) 198 54.8 1.4e-05 gi|47222575|emb|CAG02940.1| unnamed protein produc ( 142) 195 54.0 1.8e-05 gi|122890837|emb|CAM13219.1| epithelial V-like ant ( 199) 194 53.9 2.7e-05 gi|134054346|emb|CAM73167.1| zgc:85923 [Danio reri ( 238) 193 53.7 3.6e-05 gi|6013139|gb|AAF01257.1|AF109646_1 coxsackie-aden ( 319) 194 54.0 3.8e-05 gi|45709560|gb|AAH67698.1| Myelin protein zero-lik ( 215) 192 53.4 3.9e-05 gi|189543200|ref|XP_001922292.1| PREDICTED: simila ( 150) 190 52.8 4.2e-05 gi|52354778|gb|AAH82938.1| LOC494804 protein [Xeno ( 116) 188 52.3 4.8e-05 gi|127720|sp|P20938.1|MYP0_HETFR RecName: Full=Mye ( 246) 191 53.2 5.1e-05 gi|50415564|gb|AAH77583.1| Eva1-prov protein [Xeno ( 209) 190 52.9 5.4e-05 gi|197127611|gb|ACH44109.1| putative myelin protei ( 205) 189 52.7 6.2e-05 gi|56748766|sp|Q864L3.2|SCN2B_CANFA RecName: Full= ( 215) 189 52.7 6.4e-05 gi|109108846|ref|XP_001096430.1| PREDICTED: simila ( 216) 189 52.7 6.5e-05 gi|189541245|ref|XP_685400.3| PREDICTED: similar t ( 332) 190 53.1 7.5e-05 gi|114640587|ref|XP_522196.2| PREDICTED: sodium ch ( 215) 188 52.5 7.6e-05 >>gi|21748506|dbj|BAC03390.1| FLJ00300 protein [Homo sap (283 aa) initn: 1921 init1: 1921 opt: 1921 Z-score: 2445.0 bits: 460.3 E(): 1.7e-127 Smith-Waterman score: 1921; 100.000% identity (100.000% similar) in 283 aa overlap (1-283:1-283) 10 20 30 40 50 60 FLJ003 SCGEISVHCLPWVLFILDLKVESSMFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 SCGEISVHCLPWVLFILDLKVESSMFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD 10 20 30 40 50 60 70 80 90 100 110 120 FLJ003 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC 70 80 90 100 110 120 130 140 150 160 170 180 FLJ003 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV 130 140 150 160 170 180 190 200 210 220 230 240 FLJ003 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND 190 200 210 220 230 240 250 260 270 280 FLJ003 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRSI ::::::::::::::::::::::::::::::::::::::::::: gi|217 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRSI 250 260 270 280 >>gi|114640742|ref|XP_508787.2| PREDICTED: adhesion mole (446 aa) initn: 2254 init1: 1909 opt: 1909 Z-score: 2427.1 bits: 457.6 E(): 1.7e-126 Smith-Waterman score: 1909; 98.587% identity (100.000% similar) in 283 aa overlap (1-283:29-311) 10 20 30 FLJ003 SCGEISVHCLPWVLFILDLKVESSMFCPLKLI :::::::::::::::::::::::::::::::: gi|114 MSELYPRKNLQRFRGSARSSLSVELGDCSCGEISVHCLPWVLFILDLKVESSMFCPLKLI 10 20 30 40 50 60 40 50 60 70 80 90 FLJ003 LLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLSPGEHAKDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVFQSTEDKCIFKIDWTLSPGEHAKDE 70 80 90 100 110 120 100 110 120 130 140 150 FLJ003 YVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFK 130 140 150 160 170 180 160 170 180 190 200 210 FLJ003 KAVVLHVLPEEPKELMVHVGGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KAVVLHVLPEEPKELMVHVGGLIQMGCVFQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHK 190 200 210 220 230 240 220 230 240 250 260 270 FLJ003 LRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIV ::::.::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|114 LRMSAEYSQSWGHFQNRVNLVGDVFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIV 250 260 270 280 290 300 280 FLJ003 LHVSPEEPRSI :::::::::.. gi|114 LHVSPEEPRTLVTPAALRPLVLGGNQLVIIVGIVCATILLLPVLILIVKKTCGNKSSVNS 310 320 330 340 350 360 >>gi|119587759|gb|EAW67355.1| adhesion molecule, interac (259 aa) initn: 1748 init1: 1748 opt: 1748 Z-score: 2225.6 bits: 419.5 E(): 2.9e-115 Smith-Waterman score: 1748; 99.614% identity (100.000% similar) in 259 aa overlap (25-283:1-259) 10 20 30 40 50 60 FLJ003 SCGEISVHCLPWVLFILDLKVESSMFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD :::::::::::::::::::::::::::::::::::: gi|119 MFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD 10 20 30 70 80 90 100 110 120 FLJ003 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC 40 50 60 70 80 90 130 140 150 160 170 180 FLJ003 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV 100 110 120 130 140 150 190 200 210 220 230 240 FLJ003 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|119 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSAEYSQSWGHFQNRVNLVGDIFRND 160 170 180 190 200 210 250 260 270 280 FLJ003 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRSI ::::::::::::::::::::::::::::::::::::::::::: gi|119 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRSI 220 230 240 250 >>gi|71151910|sp|Q86YT9.1|JAML1_HUMAN RecName: Full=Junc (394 aa) initn: 2092 init1: 1747 opt: 1747 Z-score: 2221.9 bits: 419.5 E(): 4.7e-115 Smith-Waterman score: 1747; 99.228% identity (100.000% similar) in 259 aa overlap (25-283:1-259) 10 20 30 40 50 60 FLJ003 SCGEISVHCLPWVLFILDLKVESSMFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD :::::::::::::::::::::::::::::::::::: gi|711 MFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD 10 20 30 70 80 90 100 110 120 FLJ003 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC 40 50 60 70 80 90 130 140 150 160 170 180 FLJ003 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV 100 110 120 130 140 150 190 200 210 220 230 240 FLJ003 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND 160 170 180 190 200 210 250 260 270 280 FLJ003 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRSI :::::::::::::::::::::::::::::::::::::::::.. gi|711 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLV 220 230 240 250 260 270 gi|711 IIVGIVCATILLLPVLILIVKKTCGNKSSVNSTVLVKNTKKTNPEIKEKPCHFERCEGEK 280 290 300 310 320 330 >>gi|57635332|emb|CAD56620.2| putative junctional adhesi (394 aa) initn: 2087 init1: 1742 opt: 1742 Z-score: 2215.5 bits: 418.3 E(): 1.1e-114 Smith-Waterman score: 1742; 98.842% identity (100.000% similar) in 259 aa overlap (25-283:1-259) 10 20 30 40 50 60 FLJ003 SCGEISVHCLPWVLFILDLKVESSMFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD :::::::::::::::::::::::::::::::::::: gi|576 MFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD 10 20 30 70 80 90 100 110 120 FLJ003 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|576 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC 40 50 60 70 80 90 130 140 150 160 170 180 FLJ003 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|576 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV 100 110 120 130 140 150 190 200 210 220 230 240 FLJ003 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|576 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSAEYSQSWGHFQNRVNLVGDIFRND 160 170 180 190 200 210 250 260 270 280 FLJ003 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRSI :::::::::::::::::::::::::::::::::::::::::.. gi|576 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLV 220 230 240 250 260 270 gi|576 IIVGIVCATILLLPVLILIVKKTCGNKSSVNSTVLVKNTKKTNPEIKEKPCHFERCEGEK 280 290 300 310 320 330 >>gi|194375171|dbj|BAG62698.1| unnamed protein product [ (344 aa) initn: 2071 init1: 1734 opt: 1734 Z-score: 2206.1 bits: 416.4 E(): 3.5e-114 Smith-Waterman score: 1734; 98.456% identity (99.614% similar) in 259 aa overlap (25-283:1-259) 10 20 30 40 50 60 FLJ003 SCGEISVHCLPWVLFILDLKVESSMFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD :::::::::::::::::::::::::::::::::::: gi|194 MFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD 10 20 30 70 80 90 100 110 120 FLJ003 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|194 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDNLC 40 50 60 70 80 90 130 140 150 160 170 180 FLJ003 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV 100 110 120 130 140 150 190 200 210 220 230 240 FLJ003 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|194 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSAEYSQSWGHFQNRVNLVGDIFRND 160 170 180 190 200 210 250 260 270 280 FLJ003 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRSI :::::::::::::::::::::::::::::::::::::::::.. gi|194 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLV 220 230 240 250 260 270 gi|194 IIVGIVCATILLLPVLILIVKKTCGNKSSVNSTVLVKNTKKTNPEIKEKPCHFERCEGEV 280 290 300 310 320 330 >>gi|37543535|gb|AAM15730.1| dendritic-cell specific pro (394 aa) initn: 2071 init1: 1734 opt: 1734 Z-score: 2205.3 bits: 416.4 E(): 3.9e-114 Smith-Waterman score: 1734; 98.456% identity (99.614% similar) in 259 aa overlap (25-283:1-259) 10 20 30 40 50 60 FLJ003 SCGEISVHCLPWVLFILDLKVESSMFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD :::::::::::::::::::::::::::::::::::: gi|375 MFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD 10 20 30 70 80 90 100 110 120 FLJ003 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|375 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDNLC 40 50 60 70 80 90 130 140 150 160 170 180 FLJ003 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV 100 110 120 130 140 150 190 200 210 220 230 240 FLJ003 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|375 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSAEYSQSWGHFQNRVNLVGDIFRND 160 170 180 190 200 210 250 260 270 280 FLJ003 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRSI :::::::::::::::::::::::::::::::::::::::::.. gi|375 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLV 220 230 240 250 260 270 gi|375 IIVGIVGATILLLPVLILIVKKTCGNKSSVNSTVLVKNTKKTNPEIKEKPCHFERCEGEK 280 290 300 310 320 330 >>gi|167887476|gb|ACA05929.1| junctional adhesion molecu (384 aa) initn: 1998 init1: 1653 opt: 1653 Z-score: 2102.5 bits: 397.3 E(): 2.1e-108 Smith-Waterman score: 1653; 99.184% identity (100.000% similar) in 245 aa overlap (39-283:5-249) 10 20 30 40 50 60 FLJ003 CLPWVLFILDLKVESSMFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVF :::::::::::::::::::::::::::::: gi|167 MVSGDYSLGLNDLNVSPPELTVHVGDSALMGCVF 10 20 30 70 80 90 100 110 120 FLJ003 QSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 QSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQ 40 50 60 70 80 90 130 140 150 160 170 180 FLJ003 DVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVFQSTEVKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 DVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVFQSTEVKH 100 110 120 130 140 150 190 200 210 220 230 240 FLJ003 VTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|167 VTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGV 160 170 180 190 200 210 250 260 270 280 FLJ003 RESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRSI :::::::::::::::::::::::::::::::::.. gi|167 RESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLVIIVGIVCA 220 230 240 250 260 270 gi|167 TILLLPVLILIVKKTCGNKSSVNSTVLVKNTKKTNPEIKEKPCHFERCEGEKHIYSPIIV 280 290 300 310 320 330 >>gi|21753453|dbj|BAC04347.1| unnamed protein product [H (384 aa) initn: 1977 init1: 1640 opt: 1640 Z-score: 2086.0 bits: 394.3 E(): 1.7e-107 Smith-Waterman score: 1640; 98.367% identity (99.592% similar) in 245 aa overlap (39-283:5-249) 10 20 30 40 50 60 FLJ003 CLPWVLFILDLKVESSMFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGDSALMGCVF :::::::::::::::::::::::::::::: gi|217 MVSGDYSLGLNDLNVSPPELTVHVGDSALMGCVF 10 20 30 70 80 90 100 110 120 FLJ003 QSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILCNDGSLLLQ ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|217 QSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDNLCNDGSLLLQ 40 50 60 70 80 90 130 140 150 160 170 180 FLJ003 DVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVFQSTEVKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 DVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCVFQSTEVKH 100 110 120 130 140 150 190 200 210 220 230 240 FLJ003 VTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGV ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|217 VTKVEWIFSGRRAKEEIVFRYYHKLRMSAEYSQSWGHFQNRVNLVGDIFRNDGSIMLQGV 160 170 180 190 200 210 250 260 270 280 FLJ003 RESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRSI :::::::::::::::::::::::::::::::::.. gi|217 RESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLVIIVGIVCA 220 230 240 250 260 270 gi|217 TILLLPVLILIVKKTCGNKSSVNSTVLVKNTKKTNPEIKEKPCHFERCEGEKHIYSPIIV 280 290 300 310 320 330 >>gi|109108977|ref|XP_001093298.1| PREDICTED: adhesion m (394 aa) initn: 2024 init1: 1619 opt: 1619 Z-score: 2059.1 bits: 389.4 E(): 5.4e-106 Smith-Waterman score: 1619; 93.436% identity (96.911% similar) in 259 aa overlap (25-283:1-259) 10 20 30 40 50 60 FLJ003 SCGEISVHCLPWVLFILDLKVESSMFCPLKLILLPVLLDYSLGLNDLNVSPPELTVHVGD ::: ::::::::::::::::::::::: :::::::: gi|109 MFCLLKLILLPVLLDYSLGLNDLNVSPAELTVHVGD 10 20 30 70 80 90 100 110 120 FLJ003 SALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLMGDILC ::::::::::::::::::::: :: ::.::::::::::::::::::::::::.::::::: gi|109 SALMGCVFQSTEDKCIFKIDWILSSGEQAKDEYVLYYYSNLSVPIGRFQNRVQLMGDILC 40 50 60 70 80 90 130 140 150 160 170 180 FLJ003 NDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLIQMGCV :::::::::::::::::: ::::::::::::::::::::::::::::::.:: .:.:::: gi|109 NDGSLLLQDVQEADQGTYTCEIRLKGESQVFKKAVVLHVLPEEPKELMVRVGEMIRMGCV 100 110 120 130 140 150 190 200 210 220 230 240 FLJ003 FQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGDIFRND :::::::.:::::::::: :::::::::::::::::: :::::::::::::::::::::: gi|109 FQSTEVKYVTKVEWIFSGWRAKEEIVFRYYHKLRMSVGYSQSWGHFQNRVNLVGDIFRND 160 170 180 190 200 210 250 260 270 280 FLJ003 GSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRSI :::.:::::::::::::::::::::::::::::::::::::.. gi|109 GSIVLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLGGNQLV 220 230 240 250 260 270 gi|109 IIVGTVCATILLLPVLILIVKRTCGNKSLVNSTALVKNTKKTNPGIKEEPCYFESCEGEK 280 290 300 310 320 330 283 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 12:49:49 2009 done: Fri Feb 27 12:55:16 2009 Total Scan time: 759.590 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]