# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sh04531.fasta.nr -Q ../query/FLJ00143.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00143, 373 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7824919 sequences Expectation_n fit: rho(ln(x))= 5.6136+/-0.000193; mu= 8.5635+/- 0.011 mean_var=87.1361+/-17.192, 0's: 39 Z-trim: 53 B-trim: 1138 in 1/66 Lambda= 0.137396 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676492|dbj|BAB84898.1| FLJ00143 protein [Homo ( 373) 2411 487.5 1.9e-135 gi|156633630|sp|Q8TEQ0.2|SNX29_HUMAN RecName: Full ( 428) 2411 487.6 2.1e-135 gi|119605530|gb|EAW85124.1| hCG2042874, isoform CR ( 863) 2411 487.8 3.6e-135 gi|162319240|gb|AAI56064.1| Sorting nexin 29 [synt ( 456) 2399 485.2 1.1e-134 gi|114661102|ref|XP_001141023.1| PREDICTED: simila ( 518) 2393 484.1 2.9e-134 gi|109127699|ref|XP_001107972.1| PREDICTED: simila ( 461) 2358 477.1 3.2e-132 gi|73959103|ref|XP_536970.2| PREDICTED: similar to ( 513) 2272 460.1 4.7e-127 gi|149725978|ref|XP_001489842.1| PREDICTED: simila ( 798) 2266 459.1 1.5e-126 gi|115304816|gb|AAI23534.1| Sorting nexin 29 [Bos ( 817) 2228 451.5 2.8e-124 gi|148664933|gb|EDK97349.1| RIKEN cDNA 4933437K13, ( 461) 2215 448.8 1.1e-123 gi|81905032|sp|Q9D3S3.1|SNX29_MOUSE RecName: Full= ( 476) 2215 448.8 1.1e-123 gi|149042555|gb|EDL96192.1| rCG49833, isoform CRA_ ( 466) 2193 444.4 2.3e-122 gi|149042556|gb|EDL96193.1| rCG49833, isoform CRA_ ( 476) 2193 444.4 2.3e-122 gi|119605532|gb|EAW85126.1| hCG2042874, isoform CR ( 806) 2143 434.7 3.3e-119 gi|126334881|ref|XP_001375284.1| PREDICTED: simila ( 856) 2124 430.9 4.7e-118 gi|118097678|ref|XP_414731.2| PREDICTED: hypotheti (1021) 1993 405.0 3.6e-110 gi|149631824|ref|XP_001517043.1| PREDICTED: simila ( 748) 1834 373.4 8.6e-101 gi|20987617|gb|AAH29857.1| SNX29 protein [Homo sap ( 282) 1701 346.7 3.5e-93 gi|189525967|ref|XP_693885.3| PREDICTED: similar t ( 823) 1635 334.0 6.9e-89 gi|74189619|dbj|BAE36809.1| unnamed protein produc ( 339) 1396 286.3 6.4e-75 gi|21706616|gb|AAH34114.1| Snx29 protein [Mus musc ( 249) 1394 285.8 6.6e-75 gi|210130715|gb|EEA78386.1| hypothetical protein B ( 912) 1183 244.4 7e-62 gi|115841636|ref|XP_786538.2| PREDICTED: hypotheti ( 967) 1112 230.4 1.3e-57 gi|210101183|gb|EEA49252.1| hypothetical protein B ( 306) 1102 228.0 2.1e-57 gi|215492911|gb|EEC02552.1| conserved hypothetical ( 789) 1060 220.0 1.4e-54 gi|156211639|gb|EDO32737.1| predicted protein [Nem ( 322) 955 198.9 1.3e-48 gi|47226117|emb|CAG04491.1| unnamed protein produc ( 497) 730 154.4 4.7e-35 gi|198416169|ref|XP_002130434.1| PREDICTED: simila ( 696) 656 139.9 1.6e-30 gi|212508803|gb|EEB12391.1| conserved hypothetical ( 619) 629 134.5 5.9e-29 gi|190587317|gb|EDV27359.1| hypothetical protein T (1107) 609 130.7 1.5e-27 gi|156544225|ref|XP_001606759.1| PREDICTED: hypoth ( 688) 517 112.3 3.1e-22 gi|110756465|ref|XP_396580.3| PREDICTED: similar t ( 690) 513 111.5 5.4e-22 gi|47226118|emb|CAG04492.1| unnamed protein produc ( 368) 502 109.1 1.5e-21 gi|72174262|ref|XP_788835.1| PREDICTED: similar to ( 129) 405 89.6 4.1e-16 gi|91091388|ref|XP_973447.1| PREDICTED: similar to ( 609) 411 91.3 6e-16 gi|210110278|gb|EEA58119.1| hypothetical protein B (1238) 343 78.0 1.2e-11 gi|126304323|ref|XP_001382114.1| PREDICTED: simila (1352) 322 73.9 2.3e-10 gi|3417291|gb|AAC31664.1| Unknown gene product [Ho ( 132) 306 69.9 3.4e-10 gi|149041259|gb|EDL95192.1| kinesin family member (1297) 311 71.7 9.9e-10 gi|208022624|ref|NP_001101253.2| kinesin family me (1311) 311 71.7 1e-09 gi|109092967|ref|XP_001086226.1| PREDICTED: simila (1317) 311 71.7 1e-09 gi|74144362|dbj|BAE36039.1| unnamed protein produc ( 749) 304 70.1 1.7e-09 gi|126339715|ref|XP_001372566.1| PREDICTED: simila (1005) 304 70.2 2.1e-09 gi|58036802|emb|CAI46266.1| hypothetical protein [ ( 605) 300 69.3 2.5e-09 gi|148696474|gb|EDL28421.1| mCG129350, isoform CRA (1298) 304 70.3 2.6e-09 gi|122889598|emb|CAM13299.1| kinesin family member (1312) 304 70.3 2.6e-09 gi|149733059|ref|XP_001491896.1| PREDICTED: kinesi (1314) 304 70.3 2.6e-09 gi|220672773|emb|CAX14446.1| novel protein similar ( 152) 291 67.0 3e-09 gi|119630693|gb|EAX10288.1| chromosome 20 open rea (1303) 301 69.7 3.9e-09 gi|50403793|sp|Q96L93.2|KI16B_HUMAN RecName: Full= (1317) 301 69.7 4e-09 >>gi|18676492|dbj|BAB84898.1| FLJ00143 protein [Homo sap (373 aa) initn: 2411 init1: 2411 opt: 2411 Z-score: 2588.1 bits: 487.5 E(): 1.9e-135 Smith-Waterman score: 2411; 100.000% identity (100.000% similar) in 373 aa overlap (1-373:1-373) 10 20 30 40 50 60 FLJ001 VEASSPGHGSPLSSLLPSASVPESMTISELRQATVAMMNRKDELEEENRSLRNLLDGEME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 VEASSPGHGSPLSSLLPSASVPESMTISELRQATVAMMNRKDELEEENRSLRNLLDGEME 10 20 30 40 50 60 70 80 90 100 110 120 FLJ001 HSAALRQEVDTLKRKVAEQEERQGMKVQALARENEVLKVQLKKYVGAVQMLKREGQTAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 HSAALRQEVDTLKRKVAEQEERQGMKVQALARENEVLKVQLKKYVGAVQMLKREGQTAEV 70 80 90 100 110 120 130 140 150 160 170 180 FLJ001 PNLWSVDGEVTVAEQKPGEIAEELASSYERKLIEVAEMHGELIEFNERLHRALVAKEALV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 PNLWSVDGEVTVAEQKPGEIAEELASSYERKLIEVAEMHGELIEFNERLHRALVAKEALV 130 140 150 160 170 180 190 200 210 220 230 240 FLJ001 SQMRQELIDLRGPVPGDLSQTSEDQSLSDFEISNRALINVWIPSVFLRGKAANAFHVYQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 SQMRQELIDLRGPVPGDLSQTSEDQSLSDFEISNRALINVWIPSVFLRGKAANAFHVYQV 190 200 210 220 230 240 250 260 270 280 290 300 FLJ001 YIRIKDDEWNIYRRYTEFRSLHHKLQNKYPQVRAYNFPPKKAIGNKDAKFVEERRKQLQN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 YIRIKDDEWNIYRRYTEFRSLHHKLQNKYPQVRAYNFPPKKAIGNKDAKFVEERRKQLQN 250 260 270 280 290 300 310 320 330 340 350 360 FLJ001 YLRSVMNKVIQMVPEFAASPKKETLIQLMPFFVDITPPGEPVNSRPKAASRFPKLSRGQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 YLRSVMNKVIQMVPEFAASPKKETLIQLMPFFVDITPPGEPVNSRPKAASRFPKLSRGQP 310 320 330 340 350 360 370 FLJ001 RETRNVEPQSGDL ::::::::::::: gi|186 RETRNVEPQSGDL 370 >>gi|156633630|sp|Q8TEQ0.2|SNX29_HUMAN RecName: Full=Sor (428 aa) initn: 2411 init1: 2411 opt: 2411 Z-score: 2587.2 bits: 487.6 E(): 2.1e-135 Smith-Waterman score: 2411; 100.000% identity (100.000% similar) in 373 aa overlap (1-373:56-428) 10 20 30 FLJ001 VEASSPGHGSPLSSLLPSASVPESMTISEL :::::::::::::::::::::::::::::: gi|156 YSPADAPLGSLENGTGPEDHVLPDPGLRYSVEASSPGHGSPLSSLLPSASVPESMTISEL 30 40 50 60 70 80 40 50 60 70 80 90 FLJ001 RQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 RQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL 90 100 110 120 130 140 100 110 120 130 140 150 FLJ001 ARENEVLKVQLKKYVGAVQMLKREGQTAEVPNLWSVDGEVTVAEQKPGEIAEELASSYER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 ARENEVLKVQLKKYVGAVQMLKREGQTAEVPNLWSVDGEVTVAEQKPGEIAEELASSYER 150 160 170 180 190 200 160 170 180 190 200 210 FLJ001 KLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 KLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDF 210 220 230 240 250 260 220 230 240 250 260 270 FLJ001 EISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 EISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKYP 270 280 290 300 310 320 280 290 300 310 320 330 FLJ001 QVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|156 QVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLMP 330 340 350 360 370 380 340 350 360 370 FLJ001 FFVDITPPGEPVNSRPKAASRFPKLSRGQPRETRNVEPQSGDL ::::::::::::::::::::::::::::::::::::::::::: gi|156 FFVDITPPGEPVNSRPKAASRFPKLSRGQPRETRNVEPQSGDL 390 400 410 420 >>gi|119605530|gb|EAW85124.1| hCG2042874, isoform CRA_a (863 aa) initn: 2411 init1: 2411 opt: 2411 Z-score: 2583.0 bits: 487.8 E(): 3.6e-135 Smith-Waterman score: 2411; 100.000% identity (100.000% similar) in 373 aa overlap (1-373:491-863) 10 20 30 FLJ001 VEASSPGHGSPLSSLLPSASVPESMTISEL :::::::::::::::::::::::::::::: gi|119 YSPADAPLGSLENGTGPEDHVLPDPGLRYSVEASSPGHGSPLSSLLPSASVPESMTISEL 470 480 490 500 510 520 40 50 60 70 80 90 FLJ001 RQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL 530 540 550 560 570 580 100 110 120 130 140 150 FLJ001 ARENEVLKVQLKKYVGAVQMLKREGQTAEVPNLWSVDGEVTVAEQKPGEIAEELASSYER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ARENEVLKVQLKKYVGAVQMLKREGQTAEVPNLWSVDGEVTVAEQKPGEIAEELASSYER 590 600 610 620 630 640 160 170 180 190 200 210 FLJ001 KLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDF 650 660 670 680 690 700 220 230 240 250 260 270 FLJ001 EISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKYP 710 720 730 740 750 760 280 290 300 310 320 330 FLJ001 QVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLMP 770 780 790 800 810 820 340 350 360 370 FLJ001 FFVDITPPGEPVNSRPKAASRFPKLSRGQPRETRNVEPQSGDL ::::::::::::::::::::::::::::::::::::::::::: gi|119 FFVDITPPGEPVNSRPKAASRFPKLSRGQPRETRNVEPQSGDL 830 840 850 860 >>gi|162319240|gb|AAI56064.1| Sorting nexin 29 [syntheti (456 aa) initn: 2397 init1: 1677 opt: 2399 Z-score: 2574.0 bits: 485.2 E(): 1.1e-134 Smith-Waterman score: 2399; 99.733% identity (99.733% similar) in 374 aa overlap (1-373:83-456) 10 20 30 FLJ001 VEASSPGHGSPLSSLLPSASVPESMTISEL :::::::::::::::::::::::::::::: gi|162 YSPADAPLGSLENGTGPEDHVLPDPGLRYSVEASSPGHGSPLSSLLPSASVPESMTISEL 60 70 80 90 100 110 40 50 60 70 80 90 FLJ001 RQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 RQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL 120 130 140 150 160 170 100 110 120 130 140 FLJ001 ARENEVLKVQLKKYVGAVQMLKREGQTAE-VPNLWSVDGEVTVAEQKPGEIAEELASSYE ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|162 ARENEVLKVQLKKYVGAVQMLKREGQTAEAVPNLWSVDGEVTVAEQKPGEIAEELASSYE 180 190 200 210 220 230 150 160 170 180 190 200 FLJ001 RKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 RKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSD 240 250 260 270 280 290 210 220 230 240 250 260 FLJ001 FEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 FEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKY 300 310 320 330 340 350 270 280 290 300 310 320 FLJ001 PQVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 PQVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLM 360 370 380 390 400 410 330 340 350 360 370 FLJ001 PFFVDITPPGEPVNSRPKAASRFPKLSRGQPRETRNVEPQSGDL :::::::::::::::::::::::::::::::::::::::::::: gi|162 PFFVDITPPGEPVNSRPKAASRFPKLSRGQPRETRNVEPQSGDL 420 430 440 450 >>gi|114661102|ref|XP_001141023.1| PREDICTED: similar to (518 aa) initn: 2204 init1: 2204 opt: 2393 Z-score: 2566.8 bits: 484.1 E(): 2.9e-134 Smith-Waterman score: 2393; 99.465% identity (99.465% similar) in 374 aa overlap (1-373:145-518) 10 20 30 FLJ001 VEASSPGHGSPLSSLLPSASVPESMTISEL :::::::::::::::::::::::::::::: gi|114 LMSNALSGDDVCRRQPAFPFTAVTMLSGGFVEASSPGHGSPLSSLLPSASVPESMTISEL 120 130 140 150 160 170 40 50 60 70 80 90 FLJ001 RQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RQAIVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL 180 190 200 210 220 230 100 110 120 130 140 150 FLJ001 ARENEVLKVQLKKYVGAVQMLKREGQTAEVPNLWSVDGEVTVAEQKPGEIAEELASSYER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ARENEVLKVQLKKYVGAVQMLKREGQTAEVPNLWSVDGEVTVAEQKPGEIAEELASSYER 240 250 260 270 280 290 160 170 180 190 200 210 FLJ001 KLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDF 300 310 320 330 340 350 220 230 240 250 260 270 FLJ001 EISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKYP 360 370 380 390 400 410 280 290 300 310 320 330 FLJ001 QVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLMP 420 430 440 450 460 470 340 350 360 370 FLJ001 FFVDITPPGEPVN-SRPKAASRFPKLSRGQPRETRNVEPQSGDL ::::::::::::: :::::::::::::::::::::::::::::: gi|114 FFVDITPPGEPVNNSRPKAASRFPKLSRGQPRETRNVEPQSGDL 480 490 500 510 >>gi|109127699|ref|XP_001107972.1| PREDICTED: similar to (461 aa) initn: 2173 init1: 1457 opt: 2358 Z-score: 2530.0 bits: 477.1 E(): 3.2e-132 Smith-Waterman score: 2358; 97.872% identity (98.670% similar) in 376 aa overlap (1-373:86-461) 10 20 30 FLJ001 VEASSPGHGSPLSSLLPSASVPESMTISEL ::::::::::::::::::::::::::.::: gi|109 PADAPLGSLENGTGPEDHVLPDPGLRYRLIVEASSPGHGSPLSSLLPSASVPESMTMSEL 60 70 80 90 100 110 40 50 60 70 80 90 FLJ001 RQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL ::: :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RQAIVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL 120 130 140 150 160 170 100 110 120 130 140 FLJ001 ARENEVLKVQLKKYVGAVQMLKREGQTAEV-PNLWSVDGEVTVAEQKPGEIAEELASSYE :::::::::::::::::::::::::::::: ::::::::::::.:::::::::::::::: gi|109 ARENEVLKVQLKKYVGAVQMLKREGQTAEVVPNLWSVDGEVTVTEQKPGEIAEELASSYE 180 190 200 210 220 230 150 160 170 180 190 200 FLJ001 RKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSD 240 250 260 270 280 290 210 220 230 240 250 260 FLJ001 FEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKY 300 310 320 330 340 350 270 280 290 300 310 320 FLJ001 PQVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PQVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLM 360 370 380 390 400 410 330 340 350 360 370 FLJ001 PFFVDITPPGEP--VNSRPKAASRFPKLSRGQPRETRNVEPQSGDL ::::::.::::: ::::::::::::::::::::::::::::::: gi|109 PFFVDIAPPGEPGNKNSRPKAASRFPKLSRGQPRETRNVEPQSGDL 420 430 440 450 460 >>gi|73959103|ref|XP_536970.2| PREDICTED: similar to CG5 (513 aa) initn: 2092 init1: 1423 opt: 2272 Z-score: 2437.2 bits: 460.1 E(): 4.7e-127 Smith-Waterman score: 2272; 93.085% identity (98.404% similar) in 376 aa overlap (1-373:138-513) 10 20 30 FLJ001 VEASSPGHGSPLSSLLPSASVPESMTISEL :::: :..:::::::::::::::::::::: gi|739 YSPADAPLGSLENGTGPEDHILPEPSPRYSVEASPPSQGSPLSSLLPSASVPESMTISEL 110 120 130 140 150 160 40 50 60 70 80 90 FLJ001 RQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL ::: :::::::::::::::::::::::::::::::::::::::.::::::::. .:.::: gi|739 RQAIVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKKKVAEQEERHVLKIQAL 170 180 190 200 210 220 100 110 120 130 140 FLJ001 ARENEVLKVQLKKYVGAVQMLKREGQTAEV-PNLWSVDGEVTVAEQKPGEIAEELASSYE :::::::::::::::::::::::::::::: ::.:.:::::::.::::::.::::::::: gi|739 ARENEVLKVQLKKYVGAVQMLKREGQTAEVVPNFWNVDGEVTVTEQKPGEVAEELASSYE 230 240 250 260 270 280 150 160 170 180 190 200 FLJ001 RKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSD :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|739 RKLIEVAEMHGELIEFNERLHRALVAKDALVSQMRQELIDLRGPVPGDLSQTSEDQSLSD 290 300 310 320 330 340 210 220 230 240 250 260 FLJ001 FEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKY :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|739 FEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNVYRRYTEFRSLHHKLQNKY 350 360 370 380 390 400 270 280 290 300 310 320 FLJ001 PQVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLM ::::.:.:::::::::::::::::::::::::::::::::::..::::::::::::.::: gi|739 PQVRGYSFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQVAPEFAASPKKETLVQLM 410 420 430 440 450 460 330 340 350 360 370 FLJ001 PFFVDITPPGEPV--NSRPKAASRFPKLSRGQPRETRNVEPQSGDL ::::::::::::. :::::.::::::::::.:::::::::::::: gi|739 PFFVDITPPGEPLTKNSRPKVASRFPKLSRGHPRETRNVEPQSGDL 470 480 490 500 510 >>gi|149725978|ref|XP_001489842.1| PREDICTED: similar to (798 aa) initn: 2101 init1: 1439 opt: 2266 Z-score: 2428.2 bits: 459.1 E(): 1.5e-126 Smith-Waterman score: 2266; 93.351% identity (97.074% similar) in 376 aa overlap (1-373:423-798) 10 20 30 FLJ001 VEASSPGHGSPLSSLLPSASVPESMTISEL :::: :: ::::::::: :::::::::::: gi|149 YSPADAPLGSLENGTGPEDHLLPEPGPRYSVEASPPGPGSPLSSLLPPASVPESMTISEL 400 410 420 430 440 450 40 50 60 70 80 90 FLJ001 RQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL ::: ::::::::::::::::::::::::::::::::::::::::::::::::. :.::: gi|149 RQAIVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERHVTKIQAL 460 470 480 490 500 510 100 110 120 130 140 FLJ001 ARENEVLKVQLKKYVGAVQMLKREGQTAEV-PNLWSVDGEVTVAEQKPGEIAEELASSYE :::::::::::::::::::::::::: ::: ::::.:::::::.::::::.::::::::: gi|149 ARENEVLKVQLKKYVGAVQMLKREGQPAEVVPNLWNVDGEVTVTEQKPGEVAEELASSYE 520 530 540 550 560 570 150 160 170 180 190 200 FLJ001 RKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSD 580 590 600 610 620 630 210 220 230 240 250 260 FLJ001 FEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKY ::::::::::::::::::::::.::::::::::::::::::.:::::::::::::::::: gi|149 FEISNRALINVWIPSVFLRGKATNAFHVYQVYIRIKDDEWNVYRRYTEFRSLHHKLQNKY 640 650 660 670 680 690 270 280 290 300 310 320 FLJ001 PQVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLM ::::::::::::::::::::::::::: ::::::::::::::::::::::::::::.::. gi|149 PQVRAYNFPPKKAIGNKDAKFVEERRKLLQNYLRSVMNKVIQMVPEFAASPKKETLVQLV 700 710 720 730 740 750 330 340 350 360 370 FLJ001 PFFVDITPPGEPVN--SRPKAASRFPKLSRGQPRETRNVEPQSGDL :::.::::::::.: ::::.:::::::::..:::::::::::::: gi|149 PFFIDITPPGEPLNKNSRPKVASRFPKLSRSHPRETRNVEPQSGDL 760 770 780 790 >>gi|115304816|gb|AAI23534.1| Sorting nexin 29 [Bos taur (817 aa) initn: 2052 init1: 1390 opt: 2228 Z-score: 2387.3 bits: 451.5 E(): 2.8e-124 Smith-Waterman score: 2228; 91.489% identity (96.809% similar) in 376 aa overlap (1-373:442-817) 10 20 30 FLJ001 VEASSPGHGSPLSSLLPSASVPESMTISEL :::: ::. :::::::::::::::::.:.: gi|115 YGPADAPLGSLENGTGPEDHILPEPGPRYSVEASPPGQESPLSSLLPSASVPESMTVSDL 420 430 440 450 460 470 40 50 60 70 80 90 FLJ001 RQATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQAL ::: ::::::::::::::::::::::::::::::::::::::::::::::::. ::::: gi|115 RQAIVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERHVTKVQAL 480 490 500 510 520 530 100 110 120 130 140 FLJ001 ARENEVLKVQLKKYVGAVQMLKREGQTAEV-PNLWSVDGEVTVAEQKPGEIAEELASSYE :::::::::::::::::::::::::::::: ::::..:::::: ::::::.::::.:::: gi|115 ARENEVLKVQLKKYVGAVQMLKREGQTAEVVPNLWNIDGEVTVPEQKPGEVAEELTSSYE 540 550 560 570 580 590 150 160 170 180 190 200 FLJ001 RKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 RKLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSD 600 610 620 630 640 650 210 220 230 240 250 260 FLJ001 FEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKY :::::::::::::::::::::::::::::::::::::::::.::::.:::.::::::::: gi|115 FEISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNVYRRYAEFRTLHHKLQNKY 660 670 680 690 700 710 270 280 290 300 310 320 FLJ001 PQVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLM :::::.::::::::::::::::::::::::.::::::::::: ::::.:::.:::: ::: gi|115 PQVRAFNFPPKKAIGNKDAKFVEERRKQLQTYLRSVMNKVIQAVPEFTASPQKETLTQLM 720 730 740 750 760 770 330 340 350 360 370 FLJ001 PFFVDITPPGEPV--NSRPKAASRFPKLSRGQPRETRNVEPQSGDL ::::::::::. . :::::.:::::::.::.:::::::::::::: gi|115 PFFVDITPPGDALTKNSRPKVASRFPKLARGHPRETRNVEPQSGDL 780 790 800 810 >>gi|148664933|gb|EDK97349.1| RIKEN cDNA 4933437K13, iso (461 aa) initn: 2042 init1: 1398 opt: 2215 Z-score: 2376.8 bits: 448.8 E(): 1.1e-123 Smith-Waterman score: 2215; 90.667% identity (97.600% similar) in 375 aa overlap (2-373:87-461) 10 20 30 FLJ001 VEASSPGHGSPLSSLLPSASVPESMTISELR ::::::.::::::::::::::::::. ::: gi|148 GAADAPVGSLENGTGTENHIIPEPGLRYSREASSPGQGSPLSSLLPSASVPESMTVHELR 60 70 80 90 100 110 40 50 60 70 80 90 FLJ001 QATVAMMNRKDELEEENRSLRNLLDGEMEHSAALRQEVDTLKRKVAEQEERQGMKVQALA :: :::::::::::::: :::::::::::::::::::::.:.:::.::.::.. :::::: gi|148 QAIVAMMNRKDELEEENGSLRNLLDGEMEHSAALRQEVDALRRKVTEQQERHATKVQALA 120 130 140 150 160 170 100 110 120 130 140 150 FLJ001 RENEVLKVQLKKYVGAVQMLKREGQTAE-VPNLWSVDGEVTVAEQKPGEIAEELASSYER :::::::::::::::::::::::::::: ::.::.::.:::: ::::::.:::::::::: gi|148 RENEVLKVQLKKYVGAVQMLKREGQTAEAVPSLWNVDAEVTVPEQKPGEVAEELASSYER 180 190 200 210 220 230 160 170 180 190 200 210 FLJ001 KLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KLIEVAEMHGELIEFNERLHRALVAKEALVSQMRQELIDLRGPVPGDLSQTSEDQSLSDF 240 250 260 270 280 290 220 230 240 250 260 270 FLJ001 EISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNIYRRYTEFRSLHHKLQNKYP ::::::::::::::::::::::::::::::::::::::::.::::::::.:::.::. .: gi|148 EISNRALINVWIPSVFLRGKAANAFHVYQVYIRIKDDEWNVYRRYTEFRALHHQLQSAFP 300 310 320 330 340 350 280 290 300 310 320 330 FLJ001 QVRAYNFPPKKAIGNKDAKFVEERRKQLQNYLRSVMNKVIQMVPEFAASPKKETLIQLMP :::::.:::::::::::::::::::::::.::::::::::::::::::.::::::.::.: gi|148 QVRAYSFPPKKAIGNKDAKFVEERRKQLQSYLRSVMNKVIQMVPEFAANPKKETLVQLVP 360 370 380 390 400 410 340 350 360 370 FLJ001 FFVDITPPGEPVN--SRPKAASRFPKLSRGQPRETRNVEPQSGDL :::::::::::.: :::::.:::::::::.:::.:::::::::: gi|148 FFVDITPPGEPLNKSSRPKAVSRFPKLSRGHPREVRNVEPQSGDL 420 430 440 450 460 373 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 11:08:46 2009 done: Fri Feb 27 11:14:52 2009 Total Scan time: 836.710 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]