# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh04864.fasta.huge -Q ../query/FLJ00144.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00144, 255 aa vs ./tmplib.10216 library 2210739 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.4858+/-0.00357; mu= 12.2937+/- 0.241 mean_var=71.5383+/-15.361, 0's: 0 Z-trim: 0 B-trim: 4 in 1/39 Lambda= 0.151637 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA2019 ( 2797 res) ha06118 (2797) 93 30.1 1.5 KIAA1367 ( 579 res) fj03001 ( 579) 85 27.7 1.7 KIAA1686 ( 1175 res) fh25862s1 (1175) 86 28.2 2.4 FLJ00203 ( 1154 res) sj04233s1 (1154) 85 28.0 2.7 KIAA1064 ( 1315 res) hj05008s1 (1315) 83 27.6 4 KIAA1013 ( 1062 res) hj06791(revised) (1062) 82 27.3 4.1 KIAA1139 ( 1124 res) hk00330 (1124) 82 27.3 4.2 KIAA1565 ( 1313 res) bf00184 (1313) 82 27.4 4.7 KIAA1858 ( 2469 res) ae00147 (2469) 84 28.1 5.3 KIAA1252 ( 580 res) hh09572 ( 580) 77 25.9 5.7 KIAA1410 ( 4293 res) pg00933y4 (4293) 85 28.6 6.6 KIAA0103 ( 299 res) ha00802 ( 299) 73 24.7 6.7 KIAA1500 ( 2240 res) hh12031s1 (2240) 82 27.6 6.7 KIAA0441 ( 702 res) hh00601s1 ( 702) 76 25.8 7.6 KIAA0567 ( 978 res) hh02110 ( 978) 77 26.2 8.2 FLJ00101 ( 294 res) as00101 ( 294) 71 24.3 9 KIAA0097 ( 2038 res) ha00943(revised) (2038) 79 26.9 9.9 KIAA0211 ( 1317 res) ha02768 (1317) 77 26.3 10 KIAA1362 ( 699 res) fj02381 ( 699) 74 25.3 10 FLJ00011 ( 394 res) as00011 ( 394) 71 24.4 11 FLJ00087 ( 674 res) as00087 ( 674) 73 25.1 12 KIAA0472 ( 365 res) hh00171 ( 365) 70 24.2 12 FLJ00412 ( 749 res) sf00011 ( 749) 73 25.2 13 KIAA0574 ( 405 res) hj00204 ( 405) 70 24.2 13 FLJ00297 ( 141 res) sh04004 ( 141) 65 22.6 14 FLJ00145 ( 1731 res) sh04908 (1731) 76 26.2 14 KIAA1957 ( 481 res) fk12643 ( 481) 70 24.3 15 KIAA0466 ( 1214 res) pg00625 (1214) 74 25.6 15 KIAA1516 ( 2304 res) fh10631s2 (2304) 76 26.3 17 KIAA1016 ( 793 res) hk03719s1 ( 793) 71 24.8 18 KIAA0636 ( 540 res) hj03289 ( 540) 69 24.1 18 KIAA1403 ( 1337 res) fg02666s1 (1337) 73 25.4 19 KIAA0506 ( 78 res) hh00087 ( 78) 60 21.3 19 KIAA0315 ( 1841 res) hg00246 (1841) 74 25.8 20 KIAA1294 ( 1051 res) fg01155 (1051) 71 24.9 21 KIAA1627 ( 468 res) hh13711s1 ( 468) 67 23.6 23 KIAA1843 ( 1778 res) bf02364 (1778) 72 25.3 26 KIAA1670 ( 598 res) hh04251 ( 598) 67 23.7 27 KIAA0152 ( 315 res) ha03561 ( 315) 64 22.8 27 KIAA0224 ( 1256 res) ha04657 (1256) 70 24.7 28 KIAA1115 ( 895 res) hk05464 ( 895) 68 24.1 30 KIAA1053 ( 508 res) hh05049 ( 508) 65 23.2 32 KIAA1455 ( 2450 res) ef02451 (2450) 72 25.5 32 KIAA0157 ( 419 res) ha03221 ( 419) 64 22.9 33 KIAA1263 ( 850 res) hj00608 ( 850) 67 23.9 34 KIAA1815 ( 881 res) ha00534 ( 881) 67 23.9 34 KIAA0667 ( 1111 res) hk02319 (1111) 68 24.2 35 KIAA0987 ( 1115 res) hk01713 (1115) 68 24.3 35 KIAA1841 ( 523 res) fj20412(revised) ( 523) 64 23.0 38 KIAA0672 ( 824 res) hk02382 ( 824) 66 23.7 38 >>KIAA2019 ( 2797 res) ha06118 (2797 aa) initn: 129 init1: 50 opt: 93 Z-score: 103.3 bits: 30.1 E(): 1.5 Smith-Waterman score: 93; 24.742% identity (52.577% similar) in 97 aa overlap (135-229:2521-2617) 110 120 130 140 150 160 FLJ001 VESFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKYP :: :. .::.. . ::.. . KIAA20 DLSVPRTFSTQIVRESEIPTSEIQTPSYGFSLLKVKIPEPHTQARVYTTMTQHSRTQEGT 2500 2510 2520 2530 2540 2550 170 180 190 200 210 220 FLJ001 EVGDLRVSFSYAGLSGD-DPDLG-PAHVVTVIARQRGDQLVPFSTKSGDTLLLLHHGDFS : . .... . ..::: .:: : : .... . :.: . : . :: : . KIAA20 EEAPIQATPGVDSISGDLQPDTGEPFEMISSSVNVLGQQTLTFEVPSGHQLADSCSDEEP 2560 2570 2580 2590 2600 2610 230 240 250 FLJ001 AEVSAVPYSYGGGTSMSFLPSSGYLIRSHYQGS ::. : KIAA20 AEILEFPPDDSQEATTPLADEGRAPKDKPESKKSGLLWFWLPNIGFSSSVDETGVDSKND 2620 2630 2640 2650 2660 2670 >>KIAA1367 ( 579 res) fj03001 (579 aa) initn: 64 init1: 64 opt: 85 Z-score: 102.2 bits: 27.7 E(): 1.7 Smith-Waterman score: 89; 19.685% identity (49.213% similar) in 254 aa overlap (12-242:146-388) 10 20 30 40 FLJ001 VVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYGVHLP :.: :.. ...: : : . .. KIAA13 RVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLID-NPSEKIT 120 130 140 150 160 170 50 60 70 80 90 100 FLJ001 AVKLRRHVEMYQWVETEESREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGHNNPS ..::..:.. : .: .:: : ..:::. . . ...: .: . : : ..:: KIAA13 EIELRKRVKL----EGKELEEYLEKEKLKKEAAKKLEQSKEADIDSSDESDIEEDIDQPS 180 190 200 210 220 230 110 120 130 140 150 160 FLJ001 AMAVE-SFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSEN : .. .. . . : :: .. . : . : . .::. ::. KIAA13 AHKTKHDLMMKGEGSRKGSFFKQAK--KSYPMFPAPEERIKWDEYGEIIKPEDFLV---- 240 250 260 270 280 170 180 190 200 FLJ001 PKYPEVGDLRVSFSYAGLSGDDP---DLG--PAHVVTVI---------------ARQRGD :. . . . .. . .::.: ::. :.. ... .:. :: KIAA13 PELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDYEGRSDGD 290 300 310 320 330 340 210 220 230 240 250 FLJ001 QLVPFSTKSGDTLLLLHHG--DFSAEVSAVPYSYGGGTSMSFLPSSGYLIRSHYQGS .. . .. :.. :: . : ... ..:: ..: KIAA13 SIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDATSETHIYQ 350 360 370 380 390 400 KIAA13 VRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVEAP 410 420 430 440 450 460 >>KIAA1686 ( 1175 res) fh25862s1 (1175 aa) initn: 85 init1: 62 opt: 86 Z-score: 99.7 bits: 28.2 E(): 2.4 Smith-Waterman score: 86; 26.437% identity (58.621% similar) in 87 aa overlap (75-160:100-182) 50 60 70 80 90 100 FLJ001 LRRHVEMYQWVETEESREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGH-NNPSAM . : . . . . .. .: :. :. : . KIAA16 EGARYYINHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNY 70 80 90 100 110 120 110 120 130 140 150 160 FLJ001 AVESFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKY : : :. :. .:: .: :: :: . : : ..:.. ..::: ..:.... KIAA16 NVTSDYAVHPMSPVGR---TSRASKKVHNFGKRSNSIKRNPNAPVVRRG-WLYKQDSTGM 130 140 150 160 170 180 170 180 190 200 210 220 FLJ001 PEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLLHHGDFSA KIAA16 KLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMR 190 200 210 220 230 240 >>FLJ00203 ( 1154 res) sj04233s1 (1154 aa) initn: 51 init1: 51 opt: 85 Z-score: 98.6 bits: 28.0 E(): 2.7 Smith-Waterman score: 85; 27.517% identity (51.007% similar) in 149 aa overlap (54-195:696-834) 30 40 50 60 70 80 FLJ001 ALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWVETEESR-EYTEDGQVKKETRYSYNTEWR :. . : :. . .:... : : FLJ002 GQGPRAEAMMRSSIERGKWVFFQNCHLAPSWMPALERLIEHINPDKVHRDFRL-----WL 670 680 690 700 710 720 90 100 110 120 130 FLJ001 SEIINSKNFDREIGHNNPSAMAVESFTAT-----APFVQIGRFFLSSGLIDKVDNFKSLS . . ..: : : .:. : :..: .. . ..:. ::.: :: .:::: FLJ002 TSLPSNK-FPVSILQNG-SKMTIEPPRGVRANLLKSYSSLGEDFLNS--CHKVMEFKSLL 730 740 750 760 770 140 150 160 170 180 190 FLJ001 LSKLEDPHVDIIRRGDFFYHSENPKYPEV-GDLRVSFSYAGLSGDDPDLGPAHVVTVIAR :: : : . ..: : . : : . ::::. .: . :. : : .:. : FLJ002 LS-LCLFHGNALERRKFGPLGFNIPYEFTDGDLRICISQLKMFLDEYDDIPYKVLKYTAG 780 790 800 810 820 830 200 210 220 230 240 250 FLJ001 QRGDQLVPFSTKSGDTLLLLHHGDFSAEVSAVPYSYGGGTSMSFLPSSGYLIRSHYQGS FLJ002 EINYGGRVTDDWDRRCIMNILEDFYNPDVLSPEHSYSASGIYHQIPPTYDLHGYLSYIKS 840 850 860 870 880 890 >>KIAA1064 ( 1315 res) hj05008s1 (1315 aa) initn: 59 init1: 37 opt: 83 Z-score: 95.5 bits: 27.6 E(): 4 Smith-Waterman score: 83; 23.404% identity (56.028% similar) in 141 aa overlap (34-168:766-896) 10 20 30 40 50 FLJ001 PDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYGV--HLPAVK--LRRHVEMYQWVETEE :. :: ::... : .... : : :. KIAA10 LPGEPGEHLFPEHPLEPDSFSEGGPPGRPKPGAGVPDFLPSAQRALYLRIQQKQQEEEER 740 750 760 770 780 790 60 70 80 90 100 110 FLJ001 SREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGHNNPSAM--AVESFTATAPFVQI .:. .:... .:.. . . .: : :.. : .. ... .... :.. : ... KIAA10 ARRLAESSKQDRENEEGDTGNWYSS-------DEDEGGSSVTSILKTLRQQTSSRPPASV 800 810 820 830 840 120 130 140 150 160 170 FLJ001 GRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKYPEVGDLRVSFSYAG :.. :::: : . . :.: ::... : . : : :: KIAA10 GELS-SSGLGDPRLQKGHPTGSRLADPRLS--RDPRLTRHVEASGGSGPGDSGPSDPRLA 850 860 870 880 890 900 180 190 200 210 220 230 FLJ001 LSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLLHHGDFSAEVSAVPYSYGGGTS KIAA10 RALPTSKPEGSLHSSPVGPSSSKGSGPPPTEEEEGERALREKAVNIPLDPLPGHPLRDPR 910 920 930 940 950 960 >>KIAA1013 ( 1062 res) hj06791(revised) (1062 aa) initn: 79 init1: 57 opt: 82 Z-score: 95.5 bits: 27.3 E(): 4.1 Smith-Waterman score: 82; 23.232% identity (58.586% similar) in 99 aa overlap (34-130:281-374) 10 20 30 40 50 60 FLJ001 PDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWVETEESREY :.:::: ::: .. . . . . .: KIAA10 EDRVIEHYLKIKGLTRGQAVVQYMKIVEALPTYGVHYYAVKDKQGLPWWLGISYKGIGQY 260 270 280 290 300 310 70 80 90 100 110 120 FLJ001 TEDGQVKKETRYSYNTEWRSEIINSKNFDREIGHNNPSAMAV--ESFTATAPFVQIGRFF . .:: . .... . .. . :.: :. ..: ..: ..: .. ::: .. KIAA10 DIQDKVKPRKLFQWK-QLENLYFREKKFAVEV--HDPRRISVSRRTFGQSGLFVQT--WY 320 330 340 350 360 130 140 150 160 170 180 FLJ001 LSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKYPEVGDLRVSFSYAGLSGD .:.:: .. KIAA10 ANSSLIKSIWVMAISQHQFYLDRKQSKAKIPSARSLDEIAMDLTETGTQRASKLVTLEAK 370 380 390 400 410 420 >>KIAA1139 ( 1124 res) hk00330 (1124 aa) initn: 39 init1: 39 opt: 82 Z-score: 95.2 bits: 27.3 E(): 4.2 Smith-Waterman score: 82; 24.855% identity (56.647% similar) in 173 aa overlap (33-199:108-272) 10 20 30 40 50 FLJ001 SPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG--VHLPAVKLRRHVEMYQWVET--E :::: .:: : . .:.: . : ... : KIAA11 CEFGRLKVAQLLLNSHLCVALLEGEAKDPCDPNYTTPLHLAAKNGHREV-IRQLLRAGIE 80 90 100 110 120 130 60 70 80 90 100 110 FLJ001 ESREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGHN-NPSAM-AVESFTATAPFVQ .:. :. : . .:. .:: .... . : .: .. : .:. :..::.. . KIAA11 INRQ-TKTGTALHEAALYGKTEVVRLLLEG-GVDVNIRNTYNQTALDIVNQFTTSQASRE 140 150 160 170 180 190 120 130 140 150 160 170 FLJ001 IGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKYPEVGDLRVSFSYA : ... .. : :: .:.. .:.:: . .: :: . : ..:. : . . . KIAA11 IKQLLREASGILKVRALKDF--WNLHDPTALNVRAGDVITVLE--QHPD-GRWKGHIHES 200 210 220 230 240 180 190 200 210 220 230 FLJ001 GLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLLHHGDFSAEVSAVPYSYGGGT . : : .: :.... : KIAA11 QRGTDRIGYFPPGIVEVVSKRVGIPAARLPSAPTPLRPGFSRTPQPPAEEPPHPLTYSQL 250 260 270 280 290 300 >>KIAA1565 ( 1313 res) bf00184 (1313 aa) initn: 73 init1: 73 opt: 82 Z-score: 94.3 bits: 27.4 E(): 4.7 Smith-Waterman score: 82; 33.333% identity (74.359% similar) in 39 aa overlap (127-165:428-466) 100 110 120 130 140 150 FLJ001 HNNPSAMAVESFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFY .::....::: :...: :. : ::... KIAA15 AALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNL 400 410 420 430 440 450 160 170 180 190 200 210 FLJ001 HSENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLL .. . .: : KIAA15 RKLDEEYKERIAALKNELRKEREQILQQAGKQRLELEQEIEKAKTEENYIRDRLALSLKE 460 470 480 490 500 510 >>KIAA1858 ( 2469 res) ae00147 (2469 aa) initn: 92 init1: 69 opt: 84 Z-score: 93.3 bits: 28.1 E(): 5.3 Smith-Waterman score: 84; 35.714% identity (51.786% similar) in 56 aa overlap (182-237:953-1004) 160 170 180 190 200 210 FLJ001 GDFFYHSENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGD :: ::: . :.:: . : ::..:. KIAA18 RTTAPSSTASDFQSDSPQSHRNASHQTPQGDP-LGPQDLKQ---RSRGYKKKPASTENGQ 930 940 950 960 970 220 230 240 250 FLJ001 TLLLLHHGDFSAEVSAVPYSYGGGTSMSFLPSSGYLIRSHYQGS :: . :: :. . : : : KIAA18 WKGQAPHGPVTCEVCAASFRSGPGLSRHKARKHRPHPGAPAEPSPAALPAQQPLEPLAQK 980 990 1000 1010 1020 1030 >>KIAA1252 ( 580 res) hh09572 (580 aa) initn: 51 init1: 51 opt: 77 Z-score: 92.8 bits: 25.9 E(): 5.7 Smith-Waterman score: 77; 27.731% identity (52.101% similar) in 119 aa overlap (125-237:305-413) 100 110 120 130 140 150 FLJ001 IGHNNPSAMAVESFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDP-HVDIIRRGD :.:: : . .:.. : . : ::: : KIAA12 KMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAV-KYKIPLHVDACLGGF 280 290 300 310 320 330 160 170 180 190 200 210 FLJ001 FFYHSENPKYP--EVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGD .. :. :: . :.::. . ...:.: : : .:..:: .: :. KIAA12 LIVFMEKAGYPLEHPFDFRVK-GVTSISADTHKYGYA--------PKGSSLVLYSDKKYR 340 350 360 370 380 220 230 240 250 FLJ001 TLLLLHHGDFSAEVSAVPYSYG---GGTSMSFLPSSGYLIRSHYQGS . .. :... . : : : :: : KIAA12 NYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEATKQIIKTARFLKS 390 400 410 420 430 440 255 residues in 1 query sequences 2210739 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:41:38 2009 done: Fri Feb 27 10:41:38 2009 Total Scan time: 0.410 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]