# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh05780.fasta.huge -Q ../query/FLJ00151.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00151, 302 aa vs ./tmplib.10216 library 2210692 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.9170+/-0.00473; mu= 22.4810+/- 0.321 mean_var=132.0150+/-29.059, 0's: 0 Z-trim: 1 B-trim: 11 in 1/39 Lambda= 0.111625 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0375 ( 1540 res) hh00360s1 (1540) 128 32.0 0.26 KIAA0980 ( 1406 res) hj07083 (1406) 106 28.4 2.9 KIAA1071 ( 675 res) hj05664s2 ( 675) 103 27.3 3 KIAA0653 ( 558 res) hk01718 ( 558) 102 27.0 3.1 KIAA1924 ( 613 res) hh01339 ( 613) 101 26.9 3.6 KIAA0724 ( 1047 res) hk02773 (1047) 101 27.4 4.5 FLJ00252 ( 819 res) sj09394 ( 819) 100 27.0 4.5 KIAA0290 ( 906 res) ha06644 ( 906) 98 26.8 5.9 KIAA1868 ( 463 res) fj22550 ( 463) 94 25.6 6.9 FLJ00361 ( 366 res) sh04352 ( 366) 91 24.9 8.7 KIAA2029 ( 1021 res) pj01256 (1021) 94 26.2 9.7 KIAA1048 ( 897 res) hh02560 ( 897) 93 25.9 10 KIAA1100 ( 444 res) hk07907 ( 444) 90 24.9 11 KIAA0490 ( 135 res) hh00727 ( 135) 85 23.1 11 KIAA1870 ( 832 res) hh05136b ( 832) 92 25.7 11 KIAA0304 ( 2415 res) af07172 (2415) 96 27.2 11 KIAA0665 ( 760 res) hk02064 ( 760) 91 25.5 12 FLJ00201 ( 705 res) sj04110 ( 705) 89 25.1 14 KIAA1545 ( 968 res) fj14026s1 ( 968) 90 25.5 15 KIAA1811 ( 715 res) ha06731 ( 715) 87 24.8 18 FLJ00253 ( 349 res) sj09455 ( 349) 84 23.7 19 KIAA1963 ( 488 res) ph00179 ( 488) 85 24.2 19 KIAA0467 ( 2687 res) ff08895 (2687) 91 26.5 21 KIAA1372 ( 773 res) fj03335 ( 773) 86 24.7 21 KIAA0910 ( 1315 res) hg02207s1 (1315) 88 25.5 21 FLJ00242 ( 804 res) sj07550 ( 804) 86 24.7 21 KIAA1080 ( 517 res) hj07082 ( 517) 84 24.1 22 KIAA1877 ( 534 res) pg00264 ( 534) 84 24.1 22 KIAA1720 ( 421 res) pf00447 ( 421) 83 23.7 23 KIAA0458 ( 1552 res) ef01252 (1552) 88 25.6 23 KIAA1386 ( 1214 res) fj06274 (1214) 87 25.2 23 KIAA1394 ( 1003 res) hj07546 (1003) 86 24.9 24 KIAA1849 ( 1114 res) fg05386(revised) (1114) 86 25.0 25 FLJ00409 ( 210 res) sj08819 ( 210) 79 22.5 26 FLJ00173 ( 1269 res) sj00667 (1269) 86 25.1 26 KIAA0582 ( 760 res) fh15957 ( 760) 83 24.2 29 KIAA0457 ( 845 res) hg00693 ( 845) 83 24.3 30 FLJ00330 ( 246 res) sj03258 ( 246) 78 22.5 31 FLJ00004 ( 698 res) as00004 ( 698) 82 24.0 31 KIAA1783 ( 1560 res) fg01285 (1560) 85 25.1 32 KIAA1297 ( 2242 res) fg03883 (2242) 86 25.6 33 KIAA0749 ( 678 res) hk04328 ( 678) 81 23.8 34 FLJ00236 ( 702 res) sj07289 ( 702) 81 23.8 35 FLJ00169 ( 432 res) sh07709 ( 432) 79 23.1 35 FLJ00072 ( 204 res) as00072 ( 204) 76 22.0 36 KIAA0150 ( 944 res) ha01348 ( 944) 82 24.2 36 KIAA0817 ( 2785 res) hg01392s2 (2785) 86 25.7 37 KIAA1644 ( 132 res) fg07060 ( 132) 74 21.3 37 KIAA0183 ( 1111 res) ha02726 (1111) 82 24.3 38 KIAA1614 ( 1208 res) fj12973 (1208) 82 24.4 40 >>KIAA0375 ( 1540 res) hh00360s1 (1540 aa) initn: 45 init1: 45 opt: 128 Z-score: 116.8 bits: 32.0 E(): 0.26 Smith-Waterman score: 130; 28.413% identity (47.232% similar) in 271 aa overlap (18-284:619-856) 10 20 30 40 FLJ001 TGIAAAAGARGVSAGRRHTDPDLWPNPLG-ALDLPRDHRPAPPGCHR :. : : ::: ..:: :.:: . KIAA03 SVGDSSQEFSPIQEAQQDRGAPLDEGTCCSHSLP---PMPLGPGMDL-LGPDPSPPWSTQ 590 600 610 620 630 640 50 60 70 80 90 100 FLJ001 AGCLPVVPLTLMPTAGLAGTGVQGRWAHFWGCCGTADPTSPGGLW-QRPSSGRAGPMGSG . : . :: ::: .:: :: :.. : : : ::.. :: . .:: :.: KIAA03 VCQGP--HSSEMPPAGLRATG-QGPLAQLMDP-GPALPGSPANSHTQRDARARAD--GGG 650 660 670 680 690 110 120 130 140 150 160 FLJ001 EEWSPLLRSRQHVSRGTQQPESPKVAGAEVAVSWPEVEEALVLLQLWANLDVLLVASWQE : :.:: .. .: : : .: : . . ... : ::.. KIAA03 TESRPVLRYSKE-QRPTTLPIQPFVFQHHFPKQLAKARALHSLSQLYS------------ 700 710 720 730 740 170 180 190 200 210 220 FLJ001 LSRHVCAVTKALAQYPLKQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRRQIRQFSR :: :. :. : :: .:. .:. :. : : : : . : . . :: KIAA03 LSG--CSRTQQPA--PLAAP-AAQVSVPAPSGEPQASTPRAT-GRGARKAGSEP--ETSR 750 760 770 780 790 230 240 250 260 270 280 FLJ001 VSP-AVADAVVTAFP-SPRLLQQALEACSTERERMGLLADLPVPPSEGGRPRRVGPDLSR :: . . . .. : .: ..: .:: :. : .:: . : : : :. KIAA03 PSPLGSYSPIRSVGPFGPSTDSSASTSCSPPPEQP--TATESLPPWSHSCPSAVRPATSQ 800 810 820 830 840 850 290 300 FLJ001 RICLFLTTANPDLLLDLGS . KIAA03 QPQKEDQKILTLTEYRLHGTGSLPPLGSWRSGLSRAESLARGGGEGSMATRPSNANHLSP 860 870 880 890 900 910 >>KIAA0980 ( 1406 res) hj07083 (1406 aa) initn: 78 init1: 50 opt: 106 Z-score: 98.0 bits: 28.4 E(): 2.9 Smith-Waterman score: 106; 29.197% identity (47.445% similar) in 137 aa overlap (4-137:896-1029) 10 20 30 FLJ001 TGIAAAAGARGVSAGRRHTDPDLWPNPLGALDL ::.:: : .: .. . : : : KIAA09 GTRGLLPLRPGCGERPLAWLAPGDGRESEEAAGAGPRRRQAQDTEATQSPAPAPAPASHG 870 880 890 900 910 920 40 50 60 70 80 90 FLJ001 PRDHRPAPPGCHRAGCLPVVPLTLMPT-AGLAGTGVQG-RWAHFWGCCGTADPTSPGGLW : .. : : .:: : :. :: : : . : :. :.: .: KIAA09 PSERWSRMQPCGVDG--DIVPKEPEPFGASAAGLEQPGARELPLLGTERDASQTQPR-MW 930 940 950 960 970 980 100 110 120 130 140 150 FLJ001 QRPSSGRAGPMGSGEEWSPLLRSRQHV-SRGTQQPESPKVAGAEVAVSWPEVEEALVLLQ . : :. :..:. . . . : . :::::. : . : :: :. KIAA09 EPPLRPAASCRGQAERLQAIQEERARSWSRGTQEQASEQQARAEGALEPGCHKHSVEVAR 990 1000 1010 1020 1030 1040 160 170 180 190 200 210 FLJ001 LWANLDVLLVASWQELSRHVCAVTKALAQYPLKQYRESQAFSFCTAGRWAAGEPVARDGA KIAA09 RGSLPSHLQLADPQGSWQEQLAAPEEGETKIALEREKDDMETKLLHLEDVVRALEKHVDL 1050 1060 1070 1080 1090 1100 >>KIAA1071 ( 675 res) hj05664s2 (675 aa) initn: 69 init1: 69 opt: 103 Z-score: 97.9 bits: 27.3 E(): 3 Smith-Waterman score: 103; 22.273% identity (45.000% similar) in 220 aa overlap (84-295:429-641) 60 70 80 90 100 110 FLJ001 PLTLMPTAGLAGTGVQGRWAHFWGCCGTADPTSPGGLWQRPSSGRAGPMGSGEEWSPLLR :..:. . ::. :. :.. . KIAA10 SPIMEEKRDDKSWKGSLGILLGGDYRAEYVPSTPSPV--PPST----PLLSAHSKTGSRD 400 410 420 430 440 450 120 130 140 150 160 170 FLJ001 SRQHVSRGTQQPESPKVAGAEVAVSWPEVEEALVLLQLWANLDVLLVASWQELSRHVCAV .. :::.. .. :: : . . : .. :.. . .::. . : KIAA10 CSTQTERGTESNKTAAVAPISVPAPVAAAATAAAITATAATITTTMVAAAPVAVAAAAAP 460 470 480 490 500 510 180 190 200 210 220 230 FLJ001 TKALAQYPLKQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRRQIRQFSRVSPAVADA . : : : . : : .::. :. :: .: .: : . ..:: . : KIAA10 AAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPA 520 530 540 550 560 570 240 250 260 270 280 FLJ001 -VVTAFPSPRLLQQALEACSTERERMGLLADLPVP-PSEGGRPRRV------GPDLSRRI ... :.: : . : . .: :.: :. . .: :: .:. KIAA10 PALVPVPAPAAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATGPG-PHRL 580 590 600 610 620 630 290 300 FLJ001 CLFLTTANPDLLLDLGS . : ::: KIAA10 SIPSLTCNPDKTDGPVFHSNTLERKTPIQILGQEPDAEMVEYLI 640 650 660 670 >>KIAA0653 ( 558 res) hk01718 (558 aa) initn: 56 init1: 56 opt: 102 Z-score: 97.6 bits: 27.0 E(): 3.1 Smith-Waterman score: 107; 30.935% identity (46.763% similar) in 139 aa overlap (10-145:442-557) 10 20 30 FLJ001 TGIAAAAGARGVSAGRRHTDPDLWPNPLGALDLPRDHRP .::..: :: : :.: . . : KIAA06 FVTLRWDFPNMHRSRETSARPPRSPVPSPDQGVQGGSRHRRP----APMGCPEWVQAPAP 420 430 440 450 460 40 50 60 70 80 90 FLJ001 APPGCHRAGCLPVVPLT-LMPTAGLAGTGVQGRWAHFWGCCG--TADPTSPGGLWQRPSS .: : ::: : : .: :. : : . : :: : :: :. KIAA06 SPRGVSRAG-----PGTGAQPPWGVQG-GSRHRRPAPMGCPEWVQAPAPSPRGV------ 470 480 490 500 510 100 110 120 130 140 150 FLJ001 GRAGPMGSGEEWSPLLRSRQHVSRGTQQPESPKVAGAEVAVSWPEVEEALVLLQLWANLD .:::: :.: . :: : :. . . .::.. .:. : : : KIAA06 SRAGP-GTGAQ--PL----WGVWSGSGHRQLLSVAATPAALVCPSVPGAT 520 530 540 550 160 170 180 190 200 210 FLJ001 VLLVASWQELSRHVCAVTKALAQYPLKQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAW >>KIAA1924 ( 613 res) hh01339 (613 aa) initn: 70 init1: 45 opt: 101 Z-score: 96.5 bits: 26.9 E(): 3.6 Smith-Waterman score: 101; 29.167% identity (52.083% similar) in 96 aa overlap (34-117:44-135) 10 20 30 40 50 60 FLJ001 AAAAGARGVSAGRRHTDPDLWPNPLGALDLPRDHRPAPPGCHRAGCLPVVPLTLMPT--- :. . :: : . : : .: . .:. KIAA19 ARLAGVPRIPGSGVPGSRVGGRSAQGPRLGPEARVPAQAGSRLPGAHPRAPGAWLPSGAR 20 30 40 50 60 70 70 80 90 100 110 FLJ001 ---AGLAGTGVQGRWAHFWGCC--GTADPT---SPGGLWQRPSSGRAGPMGSGEEWS-PL :.:::.:: :. :. : : : :. .:. . . :.. : : . :. :. KIAA19 PRPASLAGVGVAGEGAESPGSCLVPEARPSPAVAPARVAESPDARRPLPAA----WQHPF 80 90 100 110 120 120 130 140 150 160 170 FLJ001 LRSRQHVSRGTQQPESPKVAGAEVAVSWPEVEEALVLLQLWANLDVLLVASWQELSRHVC : .: KIAA19 LNVFRHFRVDEWKRSAKQGDVAVVTDKTLKGAVYRIRGSVSAANYIQLPKSSTQSLGLTG 130 140 150 160 170 180 >>KIAA0724 ( 1047 res) hk02773 (1047 aa) initn: 94 init1: 46 opt: 101 Z-score: 94.6 bits: 27.4 E(): 4.5 Smith-Waterman score: 101; 24.898% identity (46.531% similar) in 245 aa overlap (38-270:42-260) 10 20 30 40 50 60 FLJ001 GARGVSAGRRHTDPDLWPNPLGALDLPRDHRPAPPGCHRAGCLPVVPLTLMPTAGLAGTG ::.:: : :: :. :::: : KIAA07 PFIGSPKSTNFGLWQASHPQTRWGGLGSHARPGPP------LTP--PLPGHPSRGLAG-G 20 30 40 50 60 70 80 90 100 110 120 FLJ001 VQGRWAHFWG--CCGTADPTSPGGLWQRPSSGRAGPMGSGEEWSPLLR-SRQHVSRGTQQ : : :: . :. :. .: . : :.: .: : . ..: .. .: KIAA07 QQPRG---WGRRQIRAHLPAREGAKMER-REEQPGAAGAGA--APALDFTVENVEKALHQ 70 80 90 100 110 130 140 150 160 170 FLJ001 -PESPKVAGAEVAVSWPEVEEALVLLQLWA-NLDVLLVASWQELSR------HVCAVTKA .:.. . ..: .: . .: : : : . ..: . :.. :. ... KIAA07 LYYDPNIENKNLAQKW--LMQAQVSPQAWHFSWQLLQPDKVPEIQYFGASALHI-KISRY 120 130 140 150 160 170 180 190 200 210 220 230 FLJ001 LAQYPLKQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRRQIRQFSRVSP-AVADAVV .. : ::. .: : :.:.: .. . : . .. . : :::: : KIAA07 WSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALA-SLALSMMPDAWPCAVADMV- 180 190 200 210 220 230 240 250 260 270 280 290 FLJ001 TAFPSPRLLQQALEACSTERERMGLLADLPVPPSEGGRPRRVGPDLSRRICLFLTTANPD ::.: . . . ..:: : : : : KIAA07 ------RLFQAEDSPVDGQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAVECGAV 240 250 260 270 280 300 FLJ001 LLLDLGS KIAA07 FPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSELFDSSVE 290 300 310 320 330 340 >>FLJ00252 ( 819 res) sj09394 (819 aa) initn: 64 init1: 56 opt: 100 Z-score: 94.6 bits: 27.0 E(): 4.5 Smith-Waterman score: 100; 32.323% identity (49.495% similar) in 99 aa overlap (2-88:693-777) 10 20 FLJ001 TGIAAAAGARGVSAGRRH-------TDPDLW :..::: . :.:. . : : : : FLJ002 VGQAQPPGPWAASLCSERKHQKRLPSKSRLGLVAAAWS-GLSGQQCHPGSGAAATPP--W 670 680 690 700 710 30 40 50 60 70 FLJ001 PNPLGALDLPRDHRPAPPGCHR---AGCLPVVPLTLMPTAG--LAGTGVQGRWAHFWGCC : :.: ::. :::.: .. : :.: : : : . :. : : FLJ002 PAGRGGL------RPGSPGCRRGLQSSGRKVGPVTHSPDLGCILESPGTPG-----WMTG 720 730 740 750 760 80 90 100 110 120 130 FLJ001 GTADPTSPGGLWQRPSSGRAGPMGSGEEWSPLLRSRQHVSRGTQQPESPKVAGAEVAVSW :. :..:: FLJ002 GAQWPSAPGTSPTTVCLELSHRGKPPPASGHRSPSWGSSLLLSCRLLACTL 770 780 790 800 810 >>KIAA0290 ( 906 res) ha06644 (906 aa) initn: 97 init1: 52 opt: 98 Z-score: 92.5 bits: 26.8 E(): 5.9 Smith-Waterman score: 98; 30.894% identity (47.967% similar) in 123 aa overlap (21-140:506-618) 10 20 30 40 FLJ001 TGIAAAAGARGVSAGRRHTDPDLW-PNPLGALDLPRDHRPAPPGCHRAGC :: : : : :. . : . : ::: :. KIAA02 SSPSPFSSSSPENVEDSGLDSPSHAAPGPSPDSWVPRP-GTPQSPPSCR-APPPEARGIR 480 490 500 510 520 530 50 60 70 80 90 100 FLJ001 LPVVPLTLMPTAGLAGTGVQGRWAHFWGCC--GTADPTSPGGLWQRPSSGRAGPMGSGEE : .: . .: : .. : : : : . ::::. :: : :. .. KIAA02 APPLPDSPQPLA--SSPGPWGLEALAGGDLMPAPADPTAREGLAAPPRRLRSRKVSC--- 540 550 560 570 580 110 120 130 140 150 160 FLJ001 WSPLLRSRQHVSRGTQQPESPKVAGAEVAVSWPEVEEALVLLQLWANLDVLLVASWQELS :: :: .:: . .: ..: .:. : KIAA02 --PLTRSNGDLSR-SLSPSPLGSSAASTALERPSFLSQTGHGVSRGPSPVVLGSQDALPI 590 600 610 620 630 640 170 180 190 200 210 220 FLJ001 RHVCAVTKALAQYPLKQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRRQIRQFSRVS KIAA02 ATAFTEYVHAYFRGHSPSCLARVTGELTMTFPAGIVRVFSGTPPPPVLSFRLVHTTAIEH 650 660 670 680 690 700 >>KIAA1868 ( 463 res) fj22550 (463 aa) initn: 83 init1: 56 opt: 94 Z-score: 91.3 bits: 25.6 E(): 6.9 Smith-Waterman score: 94; 35.185% identity (50.000% similar) in 108 aa overlap (37-135:296-396) 10 20 30 40 50 60 FLJ001 AGARGVSAGRRHTDPDLWPNPLGALDLPRDHRPAPPGCHRAGCLPVVPLTLMP--TAGLA .::. :: :: : ::: : :: : KIAA18 TTEYLGIMTNTGKTRRKGLANVQWSGDEPLQRPVTPGGHRNG-YPVVEDQHTPPQTAQHA 270 280 290 300 310 320 70 80 90 100 110 120 FLJ001 GTG-VQGRWAHFWGCCGTADPTSPGGLWQRPSSGRAGPMGSGEEWSPLLRSRQHVSR--- .: :. : . . :..: . . :. : : : :: : :.::. : KIAA18 RNGHPQALPAAHEAVYREGKPSTPESCVSSSSAIIAKP-G---EWLP--RGRQEEPRPAP 330 340 350 360 370 130 140 150 160 170 FLJ001 -GT-QQP-ESPKVAGAEVAVSWPEVEEALVLLQLWANLDVLLVASWQELSRHVCAVTKAL :: .:: :.:. : : KIAA18 TGTPRQPREAPQDPGNGVTTRECASAFTCKPRAPCTPEMLDWNPPKAKASVLAPLFSSCG 380 390 400 410 420 430 >>FLJ00361 ( 366 res) sh04352 (366 aa) initn: 105 init1: 76 opt: 91 Z-score: 89.5 bits: 24.9 E(): 8.7 Smith-Waterman score: 91; 32.911% identity (58.228% similar) in 79 aa overlap (202-278:49-124) 180 190 200 210 220 230 FLJ001 AVTKALAQYPLKQYRESQAFSFCTAGRWAAGEPVARDGAGLQAAWRR-QIRQFSRVSPAV : ...:. ::: . . .: :: . FLJ003 VLSAPAPRPPAPPGHFSPPRPRAQILRRFQGAESEESAAAWGPAWRNLHGEAAGRHSPDA 20 30 40 50 60 70 240 250 260 270 280 FLJ001 ADAVVTAFPSPRLLQQALEACSTERERMGLLADLPV-PPSEGGRPRRVGPDLSRRICLFL .:: : :: ..:: : . :..: : .. : ::.:.. :: .: FLJ003 PG--TTAPPRPRASRRALSAPAPFRQEMHLWHQVQVLPPGEAA-PRATGGGRRAPRQDRG 80 90 100 110 120 130 290 300 FLJ001 TTANPDLLLDLGS FLJ003 PAWRGRRGAAATESPGRFRRSPGGPPGTICAQPPAGAGVPGPGRPARELLSVGLQRRPGA 140 150 160 170 180 190 302 residues in 1 query sequences 2210692 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:42:14 2009 done: Fri Feb 27 10:42:14 2009 Total Scan time: 0.450 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]