# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sh06338.fasta.nr -Q ../query/FLJ00368.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00368, 299 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7824679 sequences Expectation_n fit: rho(ln(x))= 5.1325+/-0.00018; mu= 9.7758+/- 0.010 mean_var=64.8650+/-12.822, 0's: 41 Z-trim: 60 B-trim: 27 in 1/66 Lambda= 0.159246 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|21748582|dbj|BAC03428.1| FLJ00368 protein [Homo ( 299) 1958 458.2 8.5e-127 gi|114632107|ref|XP_001161248.1| PREDICTED: Rho GT ( 493) 1829 428.6 1.1e-117 gi|121948181|sp|Q14CB8.1|RHG19_HUMAN RecName: Full ( 494) 1829 428.6 1.1e-117 gi|114632111|ref|XP_001161035.1| PREDICTED: Rho GT ( 464) 1828 428.4 1.2e-117 gi|109730325|gb|AAI13889.1| ARHGAP19 protein [Homo ( 465) 1828 428.4 1.2e-117 gi|51476539|emb|CAH18254.1| hypothetical protein [ ( 494) 1822 427.0 3.2e-117 gi|109090115|ref|XP_001101897.1| PREDICTED: simila ( 494) 1817 425.9 7.2e-117 gi|85067829|gb|ABC69298.1| putative RhoGAP protein ( 494) 1813 425.0 1.4e-116 gi|37732149|gb|AAR02412.1| putative RhoGAP protein ( 517) 1813 425.0 1.4e-116 gi|73998476|ref|XP_534979.2| PREDICTED: similar to ( 517) 1777 416.7 4.4e-114 gi|119917548|ref|XP_605328.3| PREDICTED: similar t ( 492) 1759 412.6 7.4e-113 gi|12855672|dbj|BAB30415.1| unnamed protein produc ( 479) 1724 404.5 1.9e-110 gi|60360028|dbj|BAD90233.1| mFLJ00368 protein [Mus ( 491) 1724 404.5 1.9e-110 gi|134035012|sp|Q8BRH3.2|RHG19_MOUSE RecName: Full ( 494) 1724 404.5 1.9e-110 gi|26336861|dbj|BAC32114.1| unnamed protein produc ( 494) 1724 404.5 1.9e-110 gi|148709914|gb|EDL41860.1| Rho GTPase activating ( 496) 1724 404.5 2e-110 gi|114632109|ref|XP_001161210.1| PREDICTED: Rho GT ( 484) 1723 404.3 2.2e-110 gi|55959219|emb|CAI13728.1| Rho GTPase activating ( 485) 1723 404.3 2.2e-110 gi|109090117|ref|XP_001101803.1| PREDICTED: simila ( 485) 1722 404.1 2.6e-110 gi|149040173|gb|EDL94211.1| rCG57630 [Rattus norve ( 363) 1714 402.1 7.4e-110 gi|109463881|ref|XP_001054615.1| PREDICTED: simila ( 494) 1714 402.2 9.6e-110 gi|21752313|dbj|BAC04165.1| unnamed protein produc ( 275) 1706 400.2 2.1e-109 gi|149690179|ref|XP_001500468.1| PREDICTED: simila ( 552) 1694 397.7 2.5e-108 gi|126273149|ref|XP_001374167.1| PREDICTED: simila ( 635) 1651 387.8 2.7e-105 gi|82125350|sp|Q5F3G0.1|RHG19_CHICK RecName: Full= ( 495) 1549 364.3 2.5e-98 gi|82184774|sp|Q6INE5.1|RHG19_XENLA RecName: Full= ( 507) 1478 348.0 2.1e-93 gi|119570340|gb|EAW49955.1| Rho GTPase activating ( 222) 1455 342.5 4.1e-92 gi|189535595|ref|XP_701166.3| PREDICTED: similar t ( 454) 1235 292.2 1.2e-76 gi|47207778|emb|CAF91061.1| unnamed protein produc ( 243) 1148 272.0 7.5e-71 gi|47228840|emb|CAG09355.1| unnamed protein produc ( 369) 1145 271.4 1.7e-70 gi|111598606|gb|AAH86680.1| Rho GTPase activating ( 393) 1133 268.7 1.2e-69 gi|149634215|ref|XP_001505449.1| PREDICTED: simila ( 583) 1108 263.0 8.9e-68 gi|198426184|ref|XP_002130760.1| PREDICTED: simila ( 576) 744 179.4 1.3e-42 gi|210110015|gb|EEA57869.1| hypothetical protein B ( 472) 713 172.2 1.6e-40 gi|21752153|dbj|BAC04130.1| unnamed protein produc ( 313) 666 161.3 2e-37 gi|109090119|ref|XP_001101716.1| PREDICTED: simila ( 313) 666 161.3 2e-37 gi|115969871|ref|XP_001197194.1| PREDICTED: simila ( 258) 596 145.2 1.2e-32 gi|115647150|ref|XP_001199994.1| PREDICTED: simila ( 277) 596 145.2 1.2e-32 gi|189241917|ref|XP_971431.2| PREDICTED: similar t ( 611) 517 127.3 6.9e-27 gi|114632113|ref|XP_001161167.1| PREDICTED: hypoth ( 287) 496 122.3 1.1e-25 gi|119570339|gb|EAW49954.1| Rho GTPase activating ( 288) 496 122.3 1.1e-25 gi|156553112|ref|XP_001599684.1| PREDICTED: simila ( 919) 493 121.9 4.4e-25 gi|110766803|ref|XP_397294.3| PREDICTED: similar t ( 850) 475 117.7 7.3e-24 gi|193636699|ref|XP_001949455.1| PREDICTED: simila ( 621) 451 112.1 2.6e-22 gi|167870085|gb|EDS33468.1| rho GTPase activating ( 922) 424 106.0 2.6e-20 gi|108884232|gb|EAT48457.1| rho gtpase activating ( 917) 421 105.3 4.2e-20 gi|157012628|gb|EAA00816.4| AGAP001687-PA [Anophel ( 958) 404 101.4 6.5e-19 gi|212514797|gb|EEB17047.1| Rho GTPase activating ( 830) 402 100.9 8e-19 gi|193911063|gb|EDW09930.1| GI20786 [Drosophila mo (1031) 396 99.6 2.5e-18 gi|221110075|ref|XP_002156540.1| PREDICTED: simila ( 674) 392 98.6 3.3e-18 >>gi|21748582|dbj|BAC03428.1| FLJ00368 protein [Homo sap (299 aa) initn: 1958 init1: 1958 opt: 1958 Z-score: 2432.7 bits: 458.2 E(): 8.5e-127 Smith-Waterman score: 1958; 100.000% identity (100.000% similar) in 299 aa overlap (1-299:1-299) 10 20 30 40 50 60 FLJ003 TEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTELVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 TEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTELVV 10 20 30 40 50 60 70 80 90 100 110 120 FLJ003 SNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 SNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEEGI 70 80 90 100 110 120 130 140 150 160 170 180 FLJ003 AQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLLKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 AQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLLKM 130 140 150 160 170 180 190 200 210 220 230 240 FLJ003 FLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNRNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 FLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNRNL 190 200 210 220 230 240 250 260 270 280 290 FLJ003 LKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHCSLI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 LKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHCSLI 250 260 270 280 290 >>gi|114632107|ref|XP_001161248.1| PREDICTED: Rho GTPase (493 aa) initn: 1828 init1: 1828 opt: 1829 Z-score: 2269.3 bits: 428.6 E(): 1.1e-117 Smith-Waterman score: 1829; 96.907% identity (97.595% similar) in 291 aa overlap (1-291:3-291) 10 20 30 40 50 FLJ003 TEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL 10 20 30 40 50 60 60 70 80 90 100 110 FLJ003 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE 70 80 90 100 110 120 120 130 140 150 160 170 FLJ003 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL 130 140 150 160 170 180 180 190 200 210 220 230 FLJ003 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR 190 200 210 220 230 240 240 250 260 270 280 290 FLJ003 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHCSL :::::::::::::::::::::::::::::::::::::::: : :.:. : gi|114 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKN--VTANDLQENITKLNSGMA 250 260 270 280 290 FLJ003 I gi|114 FMIKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDS 300 310 320 330 340 350 >>gi|121948181|sp|Q14CB8.1|RHG19_HUMAN RecName: Full=Rho (494 aa) initn: 1828 init1: 1828 opt: 1829 Z-score: 2269.3 bits: 428.6 E(): 1.1e-117 Smith-Waterman score: 1829; 96.907% identity (97.595% similar) in 291 aa overlap (1-291:3-291) 10 20 30 40 50 FLJ003 TEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|121 MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL 10 20 30 40 50 60 60 70 80 90 100 110 FLJ003 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|121 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE 70 80 90 100 110 120 120 130 140 150 160 170 FLJ003 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|121 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL 130 140 150 160 170 180 180 190 200 210 220 230 FLJ003 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|121 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR 190 200 210 220 230 240 240 250 260 270 280 290 FLJ003 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHCSL :::::::::::::::::::::::::::::::::::::::: : :.:. : gi|121 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKN--VTANDLQENITKLNSGMA 250 260 270 280 290 FLJ003 I gi|121 FMIKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDS 300 310 320 330 340 350 >>gi|114632111|ref|XP_001161035.1| PREDICTED: Rho GTPase (464 aa) initn: 1828 init1: 1828 opt: 1828 Z-score: 2268.4 bits: 428.4 E(): 1.2e-117 Smith-Waterman score: 1828; 100.000% identity (100.000% similar) in 278 aa overlap (1-278:3-280) 10 20 30 40 50 FLJ003 TEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL 10 20 30 40 50 60 60 70 80 90 100 110 FLJ003 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE 70 80 90 100 110 120 120 130 140 150 160 170 FLJ003 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL 130 140 150 160 170 180 180 190 200 210 220 230 FLJ003 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR 190 200 210 220 230 240 240 250 260 270 280 290 FLJ003 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHCSL :::::::::::::::::::::::::::::::::::::::: gi|114 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNAPAYIRECARLHYLGSRTQA 250 260 270 280 290 300 FLJ003 I gi|114 SKDDLDLIASCHTKSFQLAKSQKRNRVDSCPHQEETQHHTEEALRELFQHVHNMPESAKK 310 320 330 340 350 360 >>gi|109730325|gb|AAI13889.1| ARHGAP19 protein [Homo sap (465 aa) initn: 1828 init1: 1828 opt: 1828 Z-score: 2268.4 bits: 428.4 E(): 1.2e-117 Smith-Waterman score: 1828; 100.000% identity (100.000% similar) in 278 aa overlap (1-278:3-280) 10 20 30 40 50 FLJ003 TEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL 10 20 30 40 50 60 60 70 80 90 100 110 FLJ003 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE 70 80 90 100 110 120 120 130 140 150 160 170 FLJ003 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL 130 140 150 160 170 180 180 190 200 210 220 230 FLJ003 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR 190 200 210 220 230 240 240 250 260 270 280 290 FLJ003 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHCSL :::::::::::::::::::::::::::::::::::::::: gi|109 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNAPAYIRECARLHYLGSRTQA 250 260 270 280 290 300 FLJ003 I gi|109 SKDDLDLIASCHTKSFQLAKSQKRNRVDSCPHQEETQHHTEEALRELFQHVHDMPESAKK 310 320 330 340 350 360 >>gi|51476539|emb|CAH18254.1| hypothetical protein [Homo (494 aa) initn: 1821 init1: 1821 opt: 1822 Z-score: 2260.6 bits: 427.0 E(): 3.2e-117 Smith-Waterman score: 1822; 96.564% identity (97.251% similar) in 291 aa overlap (1-291:3-291) 10 20 30 40 50 FLJ003 TEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|514 MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL 10 20 30 40 50 60 60 70 80 90 100 110 FLJ003 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|514 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE 70 80 90 100 110 120 120 130 140 150 160 170 FLJ003 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|514 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGAFHSNDVATLL 130 140 150 160 170 180 180 190 200 210 220 230 FLJ003 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|514 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR 190 200 210 220 230 240 240 250 260 270 280 290 FLJ003 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHCSL :::::::::::::::::::::::::::::::::::::::: : :.:. : gi|514 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKN--VTANDLQENITKLNSGMA 250 260 270 280 290 FLJ003 I gi|514 FMIKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDS 300 310 320 330 340 350 >>gi|109090115|ref|XP_001101897.1| PREDICTED: similar to (494 aa) initn: 1816 init1: 1816 opt: 1817 Z-score: 2254.4 bits: 425.9 E(): 7.2e-117 Smith-Waterman score: 1817; 96.220% identity (97.251% similar) in 291 aa overlap (1-291:3-291) 10 20 30 40 50 FLJ003 TEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL ::::::::::: :::::::::::::::::::::::::::::::::::::::::.:::: gi|109 MATEAQSEGEVPACESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEVFTEL 10 20 30 40 50 60 60 70 80 90 100 110 FLJ003 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE 70 80 90 100 110 120 120 130 140 150 160 170 FLJ003 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL 130 140 150 160 170 180 180 190 200 210 220 230 FLJ003 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR 190 200 210 220 230 240 240 250 260 270 280 290 FLJ003 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHCSL :::::::::::::::::::::::::::::::::::::::: : :.:. : gi|109 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKN--VTANDLQENITKLNSGMT 250 260 270 280 290 FLJ003 I gi|109 FMIKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDS 300 310 320 330 340 350 >>gi|85067829|gb|ABC69298.1| putative RhoGAP protein [Ho (494 aa) initn: 1812 init1: 1812 opt: 1813 Z-score: 2249.4 bits: 425.0 E(): 1.4e-116 Smith-Waterman score: 1813; 96.564% identity (97.251% similar) in 291 aa overlap (1-291:3-291) 10 20 30 40 50 FLJ003 TEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|850 MATEAQSEGEVPARESGRSDAICSFVIYNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL 10 20 30 40 50 60 60 70 80 90 100 110 FLJ003 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|850 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE 70 80 90 100 110 120 120 130 140 150 160 170 FLJ003 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|850 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL 130 140 150 160 170 180 180 190 200 210 220 230 FLJ003 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|850 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR 190 200 210 220 230 240 240 250 260 270 280 290 FLJ003 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHCSL :::::::::::::::::::::::::::::::::::::::: : :.:. : gi|850 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKN--VTANDLQENITKLNSGMA 250 260 270 280 290 FLJ003 I gi|850 FMIKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDS 300 310 320 330 340 350 >>gi|37732149|gb|AAR02412.1| putative RhoGAP protein [Ho (517 aa) initn: 1812 init1: 1812 opt: 1813 Z-score: 2249.1 bits: 425.0 E(): 1.4e-116 Smith-Waterman score: 1813; 96.564% identity (97.251% similar) in 291 aa overlap (1-291:3-291) 10 20 30 40 50 FLJ003 TEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|377 MATEAQSEGEVPARESGRSDAICSFVIYNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL 10 20 30 40 50 60 60 70 80 90 100 110 FLJ003 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|377 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE 70 80 90 100 110 120 120 130 140 150 160 170 FLJ003 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|377 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL 130 140 150 160 170 180 180 190 200 210 220 230 FLJ003 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|377 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR 190 200 210 220 230 240 240 250 260 270 280 290 FLJ003 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHCSL :::::::::::::::::::::::::::::::::::::::: : :.:. : gi|377 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKN--VTANDLQENITKLNSGMA 250 260 270 280 290 FLJ003 I gi|377 FMIKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDS 300 310 320 330 340 350 >>gi|73998476|ref|XP_534979.2| PREDICTED: similar to Rho (517 aa) initn: 1776 init1: 1776 opt: 1777 Z-score: 2204.4 bits: 416.7 E(): 4.4e-114 Smith-Waterman score: 1777; 93.814% identity (96.564% similar) in 291 aa overlap (1-291:3-291) 10 20 30 40 50 FLJ003 TEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTEL ::::::::::::.: :::::.::::::::::::::::::::::::::::::: :::: gi|739 MATEAQSEGEVPARDSRPSDAICNFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEEFTEL 10 20 30 40 50 60 60 70 80 90 100 110 FLJ003 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|739 VVSNITRLIDLPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVVFGSPLTEE 70 80 90 100 110 120 120 130 140 150 160 170 FLJ003 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GIAQIYQLIEYLHKNLRVEGLFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLL 130 140 150 160 170 180 180 190 200 210 220 230 FLJ003 KMFLGELPEPLLTHKHFNAHLKIADLMQFDDKGNKTNIPDKDRQIEALQLLFLILPPPNR :::::::::::::::::.:::::::::::::::::::.:::.:::::::::::::::::: gi|739 KMFLGELPEPLLTHKHFHAHLKIADLMQFDDKGNKTNVPDKERQIEALQLLFLILPPPNR 190 200 210 220 230 240 240 250 260 270 280 290 FLJ003 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKNGLVLLPTLEESNTITTHCSL :::::::::::::::::::::::::::::::::::::::: : :.:. : gi|739 NLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKN--VTANDLQENITKLNNGMA 250 260 270 280 290 FLJ003 I gi|739 FMIKHSQKLFKAPVYIRECARLHYLGSRTQASKDDLDLIASCSTKSFQLAKSQKRNWVDS 300 310 320 330 340 350 299 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 22:01:33 2009 done: Fri Feb 27 22:07:15 2009 Total Scan time: 789.840 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]