# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh06813.fasta.huge -Q ../query/FLJ00314.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00314, 198 aa vs ./tmplib.10216 library 2210796 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.2833+/-0.00357; mu= 14.2983+/- 0.242 mean_var=80.8336+/-17.947, 0's: 0 Z-trim: 2 B-trim: 0 in 0/40 Lambda= 0.142652 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0868 ( 1339 res) hk06919 (1339) 104 31.0 0.31 KIAA0773 ( 336 res) hk05140 ( 336) 94 28.1 0.56 KIAA1379 ( 457 res) fj05092s1 ( 457) 81 25.6 4.3 KIAA1906 ( 593 res) ah00281 ( 593) 80 25.6 5.8 FLJ00084 ( 641 res) as00084 ( 641) 80 25.6 6.1 FLJ00117 ( 331 res) as00117 ( 331) 77 24.6 6.2 KIAA1330 ( 945 res) fh15188 ( 945) 81 26.0 6.7 KIAA2023 ( 1092 res) ff05025 (1092) 81 26.1 7.3 FLJ00131 ( 173 res) sh01962 ( 173) 73 23.4 7.4 KIAA1639 ( 2584 res) af14886 (2584) 84 27.2 8.1 KIAA1886 ( 655 res) fk01837 ( 655) 78 25.2 8.2 FLJ00315 ( 925 res) sh06842 ( 925) 78 25.4 10 KIAA1458 ( 612 res) fh16694 ( 612) 76 24.8 10 KIAA0567 ( 978 res) hh02110 ( 978) 78 25.4 10 KIAA0393 ( 1433 res) hg01266(revised) (1433) 79 25.9 11 KIAA1142 ( 467 res) hh05864 ( 467) 74 24.2 12 KIAA1063 ( 593 res) hj04848 ( 593) 75 24.5 12 KIAA1817 ( 997 res) fj14474 ( 997) 77 25.2 12 KIAA0419 ( 1000 res) hh01019 (1000) 77 25.2 12 KIAA1719 ( 1050 res) pf00330s1 (1050) 77 25.3 13 KIAA1217 ( 1339 res) fh03001s1 (1339) 78 25.6 13 KIAA1233 ( 1023 res) fh08611 (1023) 76 25.0 14 KIAA0957 ( 693 res) hj05670 ( 693) 74 24.4 15 KIAA1082 ( 1787 res) fg06837 (1787) 78 25.8 15 KIAA0512 ( 710 res) hf00239 ( 710) 74 24.4 15 KIAA1490 ( 749 res) fj08103 ( 749) 74 24.5 16 FLJ00106 ( 379 res) as00106 ( 379) 71 23.5 16 KIAA0642 ( 1329 res) hh02837 (1329) 76 25.2 17 KIAA1663 ( 347 res) hk01115 ( 347) 70 23.2 17 FLJ00210 ( 161 res) sj05028 ( 161) 66 22.0 19 FLJ00005 ( 111 res) as00005 ( 111) 64 21.3 20 KIAA1399 ( 452 res) hk07377 ( 452) 70 23.4 20 FLJ00260 ( 922 res) sh05833 ( 922) 73 24.4 21 KIAA0934 ( 1585 res) pg00224 (1585) 75 25.1 22 KIAA0720 ( 1091 res) hk01741s1 (1091) 73 24.5 23 KIAA1150 ( 499 res) hg02066 ( 499) 69 23.2 25 KIAA1357 ( 836 res) fj01906 ( 836) 71 23.9 26 KIAA0487 ( 234 res) fk08362 ( 234) 65 22.0 28 KIAA1858 ( 2469 res) ae00147 (2469) 75 25.3 28 KIAA1104 ( 636 res) fh00160(revised) ( 636) 69 23.3 29 KIAA1157 ( 428 res) hh05862 ( 428) 67 22.7 30 FLJ00375 ( 708 res) sh07824 ( 708) 69 23.4 31 FLJ00042 ( 452 res) as00042 ( 452) 67 22.7 31 FLJ00248 ( 501 res) sj08681 ( 501) 67 22.8 33 KIAA0775 ( 639 res) hk05255 ( 639) 68 23.1 33 KIAA1459 ( 853 res) fh16961 ( 853) 69 23.5 35 KIAA1486 ( 677 res) fj07162 ( 677) 68 23.2 35 KIAA1693 ( 901 res) fj10588 ( 901) 69 23.5 36 KIAA1165 ( 284 res) hk01631 ( 284) 64 21.9 36 KIAA1756 ( 1001 res) fh13904(revised) (1001) 69 23.6 38 >>KIAA0868 ( 1339 res) hk06919 (1339 aa) initn: 91 init1: 57 opt: 104 Z-score: 115.5 bits: 31.0 E(): 0.31 Smith-Waterman score: 104; 25.000% identity (52.586% similar) in 116 aa overlap (29-143:62-173) 10 20 30 40 50 FLJ003 TRSASQPWYRNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLN-VDAAVQQ ..: :: : . .. :.:.. . :. : KIAA08 RAWTAPSTSQKCDEPLVSGLPHVAFSSSSSISGSYSPGYAKINKRGGAGGWSPSDSDHYQ 40 50 60 70 80 90 60 70 80 90 100 110 FLJ003 WLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSW ::: : : .. : :: . .. :. :: . :. ..:.. :. . KIAA08 WLQVDFGNRKQISAIATQGRYSSSDWVTQYRMLYSDTGRNWK-PYHQDGNIWAFPGNINS 100 110 120 130 140 150 120 130 140 150 160 170 FLJ003 KGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFS :......: : : : . : .: KIAA08 DGVVRHELQH---PIIARYVRIVPLDWNGEGRIGLRIEVYGCSYWADVINFDGHVVLPYR 160 170 180 190 200 >>KIAA0773 ( 336 res) hk05140 (336 aa) initn: 57 init1: 57 opt: 94 Z-score: 110.9 bits: 28.1 E(): 0.56 Smith-Waterman score: 94; 30.120% identity (54.217% similar) in 83 aa overlap (25-101:146-227) 10 20 30 40 50 FLJ003 TRSASQPWYRNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLN---- .: .. :.. . . :: : : : KIAA07 AYSDLSDGEKEARFLAGVMEQFAISEATLMAWSSMDGEDMSVNSTQEPLGCNYSDNYQEL 120 130 140 150 160 170 60 70 80 90 100 FLJ003 VDA--AVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGM .:. :. : . : : : . :: : : . .:... ...::::: :: KIAA07 MDSQDALAQAPMDGWPHSYVSQGMYCLGSSDAWEASDQSLIASPATGSYL-GPAFDDSQP 180 190 200 210 220 230 110 120 130 140 150 160 FLJ003 LAYYEVCSWKGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWAL KIAA07 SLHEMGPSQPASGYSALEPPPLLGGDTDWAPGVGAVDLARGPAEEEKRPLAPEEEEDAGC 240 250 260 270 280 290 >>KIAA1379 ( 457 res) fj05092s1 (457 aa) initn: 43 init1: 43 opt: 81 Z-score: 95.0 bits: 25.6 E(): 4.3 Smith-Waterman score: 81; 25.743% identity (52.475% similar) in 101 aa overlap (8-102:299-394) 10 20 30 FLJ003 TRSASQPWYRNLDFVNL-MAYDFHGSWEKVTGHNSPL :.:. . .. : . :. :.. KIAA13 LNLAENSSYIHVYRELEQAIRGADAQEDLRWFRSTSGPGMPMNWPQFEEWNPDLPHTTTK 270 280 290 300 310 320 40 50 60 70 80 90 FLJ003 YKRQEESGAAASL-NVDAAVQQWLQKGTPASKLILGMPTYGRSFTLASS-SDTRVGAPAT ..: ... ...: :. .::.. : : .: . .: :. :. :: . : : KIAA13 KEKQPKKAEGVALTNATGAVESTSQAGDRGS-----VSSYDRGQPYATEWSDDESGNPFG 330 340 350 360 370 380 100 110 120 130 140 150 FLJ003 GSGTPG---PFTKEGGMLAYYEVCSWKGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTK :: : : :: KIAA13 GSETNGGANPFEDDSKGVRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDS 390 400 410 420 430 440 >>KIAA1906 ( 593 res) ah00281 (593 aa) initn: 91 init1: 69 opt: 80 Z-score: 92.7 bits: 25.6 E(): 5.8 Smith-Waterman score: 80; 26.667% identity (53.333% similar) in 90 aa overlap (21-101:309-396) 10 20 30 40 FLJ003 TRSASQPWYRNLDFVNLMAYDFH-GSWEKVTGHNSPLYKRQEESGAAASL : : :. . . : : :: . .. KIAA19 MISEPCQKTKRKSVLAVGKGNVKVKFEPSSDEHQGGSNDIEGINRE-YKDHLSNSIEREG 280 290 300 310 320 330 50 60 70 80 90 100 FLJ003 NVDAAVQQWLQKGTPASK-------LILGMPTYGRSFTLASSS-DTRVGAPATGSGTPGP : . :::.:...:::... : :.. : :.. :. .. :. :. .: : KIAA19 NQERAVQEWFHRGTPVGQEESTNKSTTPQSPMEGKNKLLKSGGPDAFTSFPTQGK-SPDP 340 350 360 370 380 390 110 120 130 140 150 160 FLJ003 FTKEGGMLAYYEVCSWKGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLG KIAA19 NNPSDLTVTSRGLTDLEIGMYALLCVFCLAILVFLINCVAFAWKYRHKRFAVSEQGNIPH 400 410 420 430 440 450 >>FLJ00084 ( 641 res) as00084 (641 aa) initn: 53 init1: 53 opt: 80 Z-score: 92.3 bits: 25.6 E(): 6.1 Smith-Waterman score: 80; 31.429% identity (57.143% similar) in 70 aa overlap (38-101:422-488) 10 20 30 40 50 60 FLJ003 WYRNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQ-KGTPAS .:. . ::. : : .. : : :.:: FLJ000 TQEVGGQDPGEAVQPCRQPLGARVADKVRKRRKVDEGAGDSAAVASGGAQTLALAGSPAP 400 410 420 430 440 450 70 80 90 100 110 120 FLJ003 KLILGMPTYGRSFT-LASSSDTRVG----APATGSGTPGPFTKEGGMLAYYEVCSWKGAT . : : :.: . . ... :.: .:.. : :::: FLJ000 S---GHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESPSETPGP 460 470 480 490 500 130 140 150 160 170 180 FLJ003 KQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQG FLJ000 RPAGPAGDEPAESPSETPGPRPAGPAGDEPAKTPSETPGPSPAGPTRDEPAESPSETPGP 510 520 530 540 550 560 >>FLJ00117 ( 331 res) as00117 (331 aa) initn: 64 init1: 64 opt: 77 Z-score: 92.1 bits: 24.6 E(): 6.2 Smith-Waterman score: 77; 28.358% identity (55.224% similar) in 67 aa overlap (33-99:197-262) 10 20 30 40 50 60 FLJ003 SASQPWYRNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKG . :: :. : . .: ..: . :. : FLJ001 VSLKGRPLSEAIHLLQVAGETVTLKIKKQLDRPLLPRKSGSLSETS-DADEDPADALKGG 170 180 190 200 210 220 70 80 90 100 110 120 FLJ003 TPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATK ::... ..:. . .:: :. : . :: :: FLJ001 LPAARFSPAVPSVDSAVESWDSSATEGGFGGPGSYTPQAAARGTTPQERRPGWLRGSPPP 230 240 250 260 270 280 130 140 150 160 170 180 FLJ003 QRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGR FLJ001 TEPRRTSYTPTPADESFPEEEEEDDWEPPTRHPVSPLSTPSHLPLF 290 300 310 320 330 >>KIAA1330 ( 945 res) fh15188 (945 aa) initn: 104 init1: 46 opt: 81 Z-score: 91.5 bits: 26.0 E(): 6.7 Smith-Waterman score: 81; 32.727% identity (67.273% similar) in 55 aa overlap (57-109:143-197) 30 40 50 60 70 80 FLJ003 EKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRS-FTLASSS : :....:. .: :: :: .. :.:.:: KIAA13 TGLTASPKAGPCSTPTSQHGSTATFLPSEDQVLMSSAPTLHLGLGTPTQSHPPETMATSS 120 130 140 150 160 170 90 100 110 120 130 140 FLJ003 DTRVG-APATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKVPYIFRDNQWVGFDD . . .: . . :::: . . :.. KIAA13 EGACAQVPDVEGRTPGPRSCDPGLIDSLKNYLLLLLKLSSTETSGAGGESQVGAATGGLV 180 190 200 210 220 230 >>KIAA2023 ( 1092 res) ff05025 (1092 aa) initn: 70 init1: 42 opt: 81 Z-score: 90.9 bits: 26.1 E(): 7.3 Smith-Waterman score: 81; 24.490% identity (54.082% similar) in 98 aa overlap (101-191:468-564) 80 90 100 110 120 FLJ003 GMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCS--WKGATKQRIQDQ :. :.. . : . . :..: :. :.. KIAA20 RGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQHLYSFIAKILWRSAKKDVIDQI 440 450 460 470 480 490 130 140 150 160 170 180 FLJ003 KVPYIFRDNQWVGFDDVES--FKTKVSYLKQK---GLGGAMVWALDLDDFAGFSCNQGRY ..: .. .:. :. :: .. . : : ::: :... . .. : KIAA20 QIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDVVVKLRKISDWALKLSSLDRRTVTSILY 500 510 520 530 540 550 190 FLJ003 PLIQTLRQELSAEIT ::.. ::: KIAA20 PLLR-LRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQLVCALNGLA 560 570 580 590 600 610 >>FLJ00131 ( 173 res) sh01962 (173 aa) initn: 85 init1: 58 opt: 73 Z-score: 90.7 bits: 23.4 E(): 7.4 Smith-Waterman score: 73; 25.180% identity (44.604% similar) in 139 aa overlap (24-153:29-157) 10 20 30 40 50 FLJ003 TRSASQPWYRNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAV ::: : : .. ::: : : .:. : FLJ001 LYSRSCCFASVSGGWCLVKGDCSRSARLGSWPKRGGWDTGGGKRQCEPGPQD--KVQKAS 10 20 30 40 50 60 70 80 90 100 FLJ003 QQWLQK---------GTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEG . :. :. : :.: .. ...::.: :: : : : FLJ001 PRELSPNVCPSHSSGGAIRVKYPSGVPRV-LPYAWFPTTSTRLGPPAGG----GAEFLSG 60 70 80 90 100 110 110 120 130 140 150 160 FLJ003 GMLAYYEVCSWKGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVW : : . : . ..: .: .: :: .. .: :.. .. FLJ001 ---AQRAVEAQKPSFQERGHDGEVVGQERDALQESLPEVTLFSSAATDGPTHLHLFSDHL 120 130 140 150 160 170 170 180 190 FLJ003 ALDLDDFAGFSCNQGRYPLIQTLRQELSAEIT FLJ001 KLT >>KIAA1639 ( 2584 res) af14886 (2584 aa) initn: 76 init1: 46 opt: 84 Z-score: 90.1 bits: 27.2 E(): 8.1 Smith-Waterman score: 84; 26.452% identity (47.097% similar) in 155 aa overlap (24-167:1675-1827) 10 20 30 40 50 FLJ003 TRSASQPWYRNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDA ::. . ...:: . : . . : KIAA16 GQPAPFCHPKQGSAPQEGCSPHPAVAPCPPGSFPPGSCKEAPLVPSSPFLGQPQAPPAPA 1650 1660 1670 1680 1690 1700 60 70 80 90 100 FLJ003 AVQQWLQ-KGTPASKLILGMPTYGR-----SFTLASSSDT---RVGAPATGSGTPGPFTK .. :. : :.. . : : : : . ::::.. :::. .:. ::: KIAA16 KASPPLDSKMGPGDISLPGRPKPGPCSSPGSASQASSSQVSSLRVGSSQVGT-EPGPSLD 1710 1720 1730 1740 1750 1760 110 120 130 140 150 160 FLJ003 EGGMLAYYEVCSWKGATKQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKG--LGG : : : . : :: :.: . : . :. : .. : .. . : :: KIAA16 AEGWTQEAEDLSDSTPTLQRPQEQVTMRKFSLGGRGGYAGVAGYGT-FAFGGDAGGMLGQ 1770 1780 1790 1800 1810 1820 170 180 190 FLJ003 AMVWALDLDDFAGFSCNQGRYPLIQTLRQELSAEIT . .:: KIAA16 GPMWARIAWAVSQSEEEEQEEARAESQSEEQQEARAESPLPQVSARPVPEVGRAPTRSSP 1830 1840 1850 1860 1870 1880 198 residues in 1 query sequences 2210796 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:51:31 2009 done: Fri Feb 27 10:51:31 2009 Total Scan time: 0.360 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]