# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh06842.fasta.huge -Q ../query/FLJ00315.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00315, 925 aa vs ./tmplib.10216 library 2210069 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 10.0936+/-0.00928; mu= -2.0394+/- 0.621 mean_var=579.3295+/-130.431, 0's: 0 Z-trim: 6 B-trim: 0 in 0/40 Lambda= 0.053286 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1886 ( 655 res) fk01837 ( 655) 4029 324.9 2.3e-89 KIAA1224 ( 997 res) fh02652 ( 997) 3377 275.1 3.6e-74 FLJ00092 ( 369 res) as00092 ( 369) 710 69.4 1.1e-12 FLJ00253 ( 349 res) sj09455 ( 349) 237 33.0 0.095 FLJ00353 ( 1766 res) sh01144 (1766) 222 32.9 0.5 KIAA1172 ( 929 res) hj03919(revised) ( 929) 205 31.2 0.88 KIAA0595 ( 1666 res) hj02929s1 (1666) 205 31.5 1.2 KIAA0669 ( 825 res) hk02346 ( 825) 191 30.0 1.7 FLJ00201 ( 705 res) sj04110 ( 705) 189 29.7 1.8 KIAA0613 ( 734 res) hg01088b ( 734) 182 29.2 2.6 KIAA1820 ( 1644 res) hh01321 (1644) 189 30.3 2.8 KIAA0235 ( 1064 res) ha04677s1 (1064) 183 29.6 3.1 KIAA0755 ( 1093 res) hk04532 (1093) 182 29.5 3.3 KIAA1306 ( 1154 res) fh05845 (1154) 181 29.5 3.6 KIAA0268 ( 1193 res) ha07061 (1193) 178 29.3 4.2 KIAA1760 ( 2219 res) af00030 (2219) 184 30.1 4.3 KIAA0458 ( 1552 res) ef01252 (1552) 179 29.5 4.6 KIAA1002 ( 962 res) hk09859 ( 962) 172 28.6 5.2 KIAA2035 ( 1135 res) ff09201 (1135) 173 28.8 5.4 KIAA0693 ( 404 res) hk03927 ( 404) 162 27.3 5.6 KIAA1887 ( 967 res) fk02232 ( 967) 169 28.4 6.1 KIAA0656 ( 912 res) hk01789 ( 912) 168 28.3 6.3 KIAA0293 ( 1505 res) hg03205 (1505) 173 29.0 6.3 KIAA1357 ( 836 res) fj01906 ( 836) 167 28.2 6.3 KIAA0269 ( 567 res) ha06751 ( 567) 161 27.4 7 KIAA1538 ( 1029 res) fg06773 (1029) 165 28.2 7.8 KIAA1668 ( 791 res) fh11717 ( 791) 160 27.6 8.9 KIAA0771 ( 948 res) hk05113 ( 948) 161 27.8 9.3 KIAA1029 ( 1015 res) fh00363 (1015) 160 27.8 10 KIAA0304 ( 2415 res) af07172 (2415) 168 29.0 11 KIAA1635 ( 1435 res) fh23184(revised) (1435) 161 28.1 12 KIAA0407 ( 2143 res) hg01339 (2143) 165 28.6 12 KIAA1297 ( 2242 res) fg03883 (2242) 165 28.7 12 KIAA0347 ( 1281 res) hg01528(revised) (1281) 159 27.8 12 FLJ00084 ( 641 res) as00084 ( 641) 152 26.8 12 KIAA1908 ( 445 res) ah02604 ( 445) 148 26.3 12 KIAA0240 ( 1087 res) fg03390 (1087) 157 27.6 12 KIAA0250 ( 1122 res) ha02790 (1122) 157 27.6 13 KIAA0309 ( 3053 res) hg00096s1 (3053) 165 28.9 14 KIAA0306 ( 1451 res) hg00063 (1451) 157 27.8 14 FLJ00198 ( 677 res) sj03504 ( 677) 149 26.6 15 KIAA1860 ( 689 res) fh18358 ( 689) 148 26.6 16 KIAA1471 ( 1421 res) fj02383s1 (1421) 155 27.6 16 KIAA0863 ( 1181 res) hk06535 (1181) 153 27.3 16 FLJ00248 ( 501 res) sj08681 ( 501) 144 26.1 16 KIAA1075 ( 1505 res) hj06716s1 (1505) 155 27.6 16 KIAA1213 ( 484 res) fh01142 ( 484) 143 26.0 17 KIAA0954 ( 1183 res) hj05543s1 (1183) 152 27.2 17 KIAA0324 ( 2800 res) ee08846s1 (2800) 159 28.4 18 KIAA0181 ( 2079 res) ha02522s1 (2079) 155 27.9 20 >>KIAA1886 ( 655 res) fk01837 (655 aa) initn: 3935 init1: 3935 opt: 4029 Z-score: 1697.6 bits: 324.9 E(): 2.3e-89 Smith-Waterman score: 4542; 95.888% identity (96.035% similar) in 681 aa overlap (245-925:1-655) 220 230 240 250 260 270 FLJ003 MNPTGIGGVMGPSGLSPLAMNPTRAAGMTPLYAGQRLPQHGYPGPPQAQPLPRQGVKRTY :::::::::::::::::::::::::::::: KIAA18 LYAGQRLPQHGYPGPPQAQPLPRQGVKRTY 10 20 30 280 290 300 310 320 330 FLJ003 SEVYPGQQYLQGGQYAPSTAQFAPSPGQPPAPSPSYPGHRLPLQQGMTQSLSVPGPTGLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA18 SEVYPGQQYLQGGQYAPSTAQFAPSPGQPPAPSPSYPGHRLPLQQGMTQSLSVPGPTGLH 40 50 60 70 80 90 340 350 360 370 380 390 FLJ003 YKPTEQFNGQGASFNGGSVSYSQPGLSGPTRSIPGYPSSPLPGNPTPPMTPSSSVPYMSP :::: :::::::::::::::::::::::::::::: KIAA18 YKPT--------------------------RSIPGYPSSPLPGNPTPPMTPSSSVPYMSP 100 110 120 400 410 420 430 440 450 FLJ003 NQEVKSPFLPDLKPNLNSFHSSPSGSGPCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVF ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: KIAA18 NQEVKSPFLPDLKPNLNSLHSSPSGSGPCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVF 130 140 150 160 170 180 460 470 480 490 500 510 FLJ003 QLRDSVYKTLIMRPDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA18 QLRDSVYKTLIMRPDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKP 190 200 210 220 230 240 520 530 540 550 560 570 FLJ003 LYLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA18 LYLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLLKKRLLPAEHCITKIK 250 260 270 280 290 300 580 590 600 610 620 630 FLJ003 RNFSSGTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA18 RNFSSGTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQ 310 320 330 340 350 360 640 650 660 670 680 690 FLJ003 LNCERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA18 LNCERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDM 370 380 390 400 410 420 700 710 720 730 740 750 FLJ003 HIKEEPDGPALKRCRTVSPAHVLMPSVMEMIAALGPGAAPFAPLQPPSVPAPSDYPGQGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA18 HIKEEPDGPALKRCRTVSPAHVLMPSVMEMIAALGPGAAPFAPLQPPSVPAPSDYPGQGS 430 440 450 460 470 480 760 770 780 790 800 810 FLJ003 SFLGPGTFPESFPPTTPSTPTLAEFTPGPPPISYQSDIPSSLLTSEKSTACLPSQMAPAG ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: KIAA18 SFLGPGTFPESFPPTMPSTPTLAEFTPGPPPISYQSDIPSSLLTSEKSTACLPSQMAPAG 490 500 510 520 530 540 820 830 840 850 860 870 FLJ003 HLDPTHNPGTPGLHTSNLGAPPGPQLHHSNPPPASRQSLGQASLGPTGELAFSPATGVMG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA18 HLDPTHNPGTPGLHTSNLGAPPGPQLHHSNPPPASRQSLGQASLGPTGELAFSPATGVMG 550 560 570 580 590 600 880 890 900 910 920 FLJ003 PPSMSGAGEAPEPALDLLPELTNPDELLSYLGPPDLPTNNNDDLLSLFENN ::::::::::::::::::::::::::::::::::::::::::::::::::: KIAA18 PPSMSGAGEAPEPALDLLPELTNPDELLSYLGPPDLPTNNNDDLLSLFENN 610 620 630 640 650 >>KIAA1224 ( 997 res) fh02652 (997 aa) initn: 2968 init1: 1001 opt: 3377 Z-score: 1424.9 bits: 275.1 E(): 3.6e-74 Smith-Waterman score: 3801; 61.354% identity (79.167% similar) in 960 aa overlap (5-925:58-997) 10 20 30 FLJ003 AAPLPMNSMNPMKPALPPAPHGDGSFAYESVPWQ :..::. :::.: :.:::: :.::::: KIAA12 SWCEELGRLLLLRHQKSRQSDPPGKLPMQPPLSSMSSMKPTLS---HSDGSFPYDSVPWQ 30 40 50 60 70 80 40 50 60 70 80 90 FLJ003 QSATQPAGSLSVVTTVWGVGNATQSQVLGNPMGPAGSP---SGSSMMPGVAGGSSALTSP :...:: :::::::::::: :..:::::::::. :..: .:. : :.. .. .:.:: KIAA12 QNTNQPPGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSP 90 100 110 120 130 140 100 110 120 130 140 FLJ003 QCLGQQA-F-AEGGANKGYVQQGVYSRGGYPGAPGFTTGYAGGPG---GLGLPSHAARPS : ::: : :..: . :.::..:.: .:::. :: ..: :::. :.:.: :. :: KIAA12 QFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHT-RPP 150 160 170 180 190 200 150 160 170 180 190 200 FLJ003 TDFTQ---AAAAAAVAAAAATATATATATVAALQEKQSQELSQYGAMGAGQSFNSQFLQH .:::: ::::::::::::::::::::::::::: :.....::: :: :..::::... KIAA12 ADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPMGPTQAYNSQFMNQ 210 220 230 240 250 260 210 220 230 240 250 FLJ003 GGPRGPSVPAG-MNPTGIGGVMGPSGLS--PLAMNPTRAAGMTPLYA-GQRLPQHGYPGP :::::. .: :::..... : :::.: :..:: : :..:. . :::.::. :::: KIAA12 PGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQQTYPGP 270 280 290 300 310 320 260 270 280 290 300 310 FLJ003 PQAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPAP-------SPSYPG . : :: :..:: : ::. . ::.:.. :: .::: ::: ::.::: KIAA12 -RPQSLPIQNIKRPY----PGEPNYGNQQYGPNS-QFPTQPGQYPAPNPPRPLTSPNYPG 330 340 350 360 370 320 330 340 350 360 FLJ003 HRLPLQQGMTQSLSVPGPT---GLHYKPTEQFNGQGASFNGGSVS-YSQPGLSGPTRSIP .:.: : . : : :: : .::: ::::::. .:.:.: : ::: ... : : .: KIAA12 QRMPSQPSSGQ---YPPPTVNMGQYYKP-EQFNGQNNTFSGSSYSNYSQGNVNRPPRPVP 380 390 400 410 420 430 370 380 390 400 410 420 FLJ003 --GYPSSPLPGNPTPPMTPSSSVP-YMSPNQEVKSPFLPDLKPNLNSFHSSPSGSGPCDE .:: ::.::::::::::.::.: :.::.:.:: :: ::.:::.... :.. . :: KIAA12 VANYPHSPVPGNPTPPMTPGSSIPPYLSPSQDVKPPFPPDIKPNMSALPPPPANHN--DE 440 450 460 470 480 490 430 440 450 460 470 480 FLJ003 LRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMN ::::::::::::::::::.::::::::::.:: .:..::. : ::::::::::::::::: KIAA12 LRLTFPVRDGVVLEPFRLEHNLAVSNHVFHLRPTVHQTLMWRSDLELQFKCYHHEDRQMN 500 510 520 530 540 550 490 500 510 520 530 540 FLJ003 TNWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQL ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: KIAA12 TNWPASVQVSVNATPLTIERGDNKTSHKPLHLKHVCQPGRNTIQITVTACCCSHLFVLQL 560 570 580 590 600 610 550 560 570 580 590 600 FLJ003 VHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSS-GTIPGTPGPNGEDGVEQTAIKVSLK :::::::::::::::::::::::::::::::::: .. :. :::::::::::::::: KIAA12 VHRPSVRSVLQGLLKKRLLPAEHCITKIKRNFSSVAASSGNTTLNGEDGVEQTAIKVSLK 620 630 640 650 660 670 610 620 630 640 650 660 FLJ003 CPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLG :::::::::::::::::.:.:::::::::::::::::::::::::::::::::::::: : KIAA12 CPITFRRIQLPARGHDCKHVQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMWG 680 690 700 710 720 730 670 680 690 700 710 720 FLJ003 ILIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEM :: ::.:..::.::::::::.:::.: :.:::..::: :: .:.::....::.:::: KIAA12 ILNAIQHSEFEEVTIDPTCSWRPVPIKSDLHIKDDPDGIPSKRFKTMSPSQMIMPNVMEM 740 750 760 770 780 790 730 740 750 760 770 780 FLJ003 IAALGPGAAPFAPLQPPSVPAPS-DYPGQGSSFLGPGTFPESFPPTTPSTPTLAEFTPGP ::::::: .:. :: :: . : :: .::... : :.: .:: .:. .. .: :: KIAA12 IAALGPGPSPY-PLPPPPGGTNSNDYSSQGNNYQGHGNF--DFPHGNPGGTSMNDFMHGP 800 810 820 830 840 790 800 810 820 830 840 FLJ003 PPISYQSDIPSSLLTSEKSTACLPSQ--MAPAGHLDPTHNPGTPGLHTSNLGAPPGPQLH : .:. :.:... . :: . : : : :: : : :::. . .. :: :: KIAA12 PQLSHPPDMPNNMAALEKPLSH-PMQETMPHAGSSDQPHPSIQQGLHVPHPSSQSGPPLH 850 860 870 880 890 900 850 860 870 880 890 FLJ003 HSN--PPPAS---RQSLGQA-SLGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPEL ::. ::: : :: : : : ..:.:.:.... : . .::.. :::.::::::: KIAA12 HSGAPPPPPSQPPRQPPQAAPSSHPHSDLTFNPSSALEGQAGAQGASDMPEPSLDLLPEL 910 920 930 940 950 960 900 910 920 FLJ003 TNPDELLSYLGPPDLPTNNNDDLLSLFENN :::::::::: :::::.:.::::::::::: KIAA12 TNPDELLSYLDPPDLPSNSNDDLLSLFENN 970 980 990 >>FLJ00092 ( 369 res) as00092 (369 aa) initn: 680 init1: 292 opt: 710 Z-score: 321.0 bits: 69.4 E(): 1.1e-12 Smith-Waterman score: 942; 53.020% identity (75.839% similar) in 298 aa overlap (5-281:38-326) 10 20 30 FLJ003 AAPLPMNSMNPMKPALPPAPHGDGSFAYESVPWQ :..::. :::.: :.:::: :.::::: FLJ000 SWCEELGRLLLLRHQKSRQSDPPGKLPMQPPLSSMSSMKPTLS---HSDGSFPYDSVPWQ 10 20 30 40 50 60 40 50 60 70 80 90 FLJ003 QSATQPAGSLSVVTTVWGVGNATQSQVLGNPMGPAGSP---SGSSMMPGVAGGSSALTSP :...:: :::::::::::: :..:::::::::. :..: .:. : :.. .. .:.:: FLJ000 QNTNQPPGSLSVVTTVWGVTNTSQSQVLGNPMANANNPMNPGGNPMASGMTTSNPGLNSP 70 80 90 100 110 120 100 110 120 130 140 FLJ003 QCLGQQA-F-AEGGANKGYVQQGVYSRGGYPGAPGFTTGYAGGPG---GLGLPSHAARPS : ::: : :..: . :.::..:.: .:::. :: ..: :::. :.:.: :. :: FLJ000 QFAGQQQQFSAKAGPAQPYIQQSMYGRPNYPGSGGFGASYPGGPNAPAGMGIPPHT-RPP 130 140 150 160 170 180 150 160 170 180 190 FLJ003 TDFTQ---AAAAAAVAAAAATATATATATVAALQEKQSQELSQYGA------MGAGQSFN .:::: ::::::::::::::::::::::::::: :.....::: :: :..: FLJ000 ADFTQPAAAAAAAAVAAAAATATATATATVAALQETQNKDINQYGPVCSSFQMGPTQAYN 190 200 210 220 230 240 200 210 220 230 240 250 FLJ003 SQFLQHGGPRGPSVPAG-MNPTGIGGVMGPSGLS--PLAMNPTRAAGMTPLYA-GQRLPQ :::... :::::. .: :::..... : :::.: :..:: : :..:. . :::.:: FLJ000 SQFMNQPGPRGPASMGGSMNPASMAAGMTPSGMSGPPMGMNQPRPPGISPFGTHGQRMPQ 250 260 270 280 290 300 260 270 280 290 300 310 FLJ003 HGYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPAPSPSYPGH . :::: . : :: :..:: : ::. FLJ000 QTYPGP-RPQSLPIQNIKRPY----PGEVSAAVGAWEVGTGTPGLEDMGRGYGFGRGVAW 310 320 330 340 350 >>FLJ00253 ( 349 res) sj09455 (349 aa) initn: 131 init1: 84 opt: 237 Z-score: 124.8 bits: 33.0 E(): 0.095 Smith-Waterman score: 259; 25.478% identity (51.274% similar) in 314 aa overlap (110-393:2-294) 80 90 100 110 120 130 FLJ003 GVAGGSSALTSPQCLGQQAFAEGGANKGYVQQGVYSRGGYPGAPGFTTGYAGGPGGLGLP :.: .:. : ::: . :.: FLJ002 SQEGYGTRSQPPLAPG-----KPNHEDLNLI 10 20 140 150 160 170 180 190 FLJ003 SHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQSQELSQYGAMGA-GQSFN- .. :::. ... :. .: . ... .. . :. .: :. .. :.. : FLJ002 QQE-RPSSLPVEVLASEDAAFGLKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNP 30 40 50 60 70 80 200 210 220 230 240 250 FLJ003 --SQFLQHGGPRGPSVPAGMNPTGIGGVMGPSGLSPLAMNPTRAAGMTPL-YAGQRLPQH : : :..:. :.:.: .:. .: ::.. : .:.. ..: :...: FLJ002 AQSPFSPHASPHLSSIPGGPSPSPVG--------SPVGSNQSRSGPISPASIPGSQMP-- 90 100 110 120 130 260 270 280 290 300 310 FLJ003 GYPGPPQAQPLPRQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPS---PGQPPAPSPSYP : :: .: . . : . . .. : : :. ::..:. :.. : :::. FLJ002 --PQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQ 140 150 160 170 180 190 320 330 340 350 FLJ003 GHR--LPLQQGMTQSLSVP-----GPTGLHYKPTEQFNGQGASFNG-----GSVSYSQPG : .::. ... : :: : . .: . .::..: : . .: FLJ002 MHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMH 200 210 220 230 240 250 360 370 380 390 400 FLJ003 LSGPTR---SIP-------GYPSSPLPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPN .::.. ..: :. . :.::: . ::::: : :: FLJ002 GQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSS-MTPSS--PGMSQQGGPGMGPPMPTVNR 260 270 280 290 300 310 410 420 430 440 450 460 FLJ003 LNSFHSSPSGSGPCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPD FLJ002 KAQEAAAAVMQAAANSAQSRYATQEHAPGRYAVCLPVTT 320 330 340 >>FLJ00353 ( 1766 res) sh01144 (1766 aa) initn: 212 init1: 128 opt: 222 Z-score: 111.7 bits: 32.9 E(): 0.5 Smith-Waterman score: 222; 29.412% identity (50.000% similar) in 170 aa overlap (713-877:148-309) 690 700 710 720 730 740 FLJ003 CSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEMIAALGPGAAPFAPLQPPS : . : . : . : . : :..::. FLJ003 TQSYLQEKVNSFQNMKNQYMGNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLP-PPVMPPA 120 130 140 150 160 170 750 760 770 780 790 FLJ003 VPAPSDYPGQGSSFLGPGTFPESFPPTTPSTP-TLAEFTPGP--PPISYQSDIPSSLLTS .:: ::. . : ..: : :: :. : .:. : : :: : .: : .: FLJ003 LPATVPPPGMPPPVM-PPSLPTSVPP--PGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPP 180 190 200 210 220 230 800 810 820 830 840 850 FLJ003 EKSTACLPSQMAPAGHLDPTHNPGTPGLHTSNLGAPPG--PQLHHSNPPPASRQSLGQAS . .. : . : :. . : ::. :.: : ::: . :::: .. .:. FLJ003 PSLSSTAPPPVMPLPPLSSATPP--PGIPPP--GVPQGIPPQLTAAPVPPASSSQSSQVP 240 250 260 270 280 860 870 880 890 900 910 FLJ003 LGPTGELAFSPATGVMGPPSMSGAGEAPEPALDLLPELTNPDELLSYLGPPDLPTNNNDD : : .:.. .::. FLJ003 EKPRPALLPTPVSFGSAPPTTYHPPLQSAGPSEQVNSKAPLSKSALPYSSFSSDQGLGES 290 300 310 320 330 340 >>KIAA1172 ( 929 res) hj03919(revised) (929 aa) initn: 118 init1: 82 opt: 205 Z-score: 107.4 bits: 31.2 E(): 0.88 Smith-Waterman score: 306; 21.439% identity (46.685% similar) in 709 aa overlap (243-911:41-676) 220 230 240 250 260 270 FLJ003 AGMNPTGIGGVMGPSGLSPLAMNPTRAAGMTPLYAGQRLPQHGYPGPPQAQPLPRQGVKR :: ... . ..: : : . .. . : KIAA11 TFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQ--KAAFPPPEQKTAFDKKLLDR 20 30 40 50 60 280 290 300 310 320 330 FLJ003 TYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPAPSPSYPGHRLPLQQGMTQSLSVPGPTG . : . . . ... ::. . ::::. . :. : . : : : . KIAA11 FDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPTATLPAAAAP------AAASPPPPQA 70 80 90 100 110 120 340 350 360 370 380 FLJ003 LHYKPTEQFNGQGASFNGGSVSYSQPGLSG----PTR-SIPGYPSSPLPGN---PTPPMT : . .. : : . ... :: . : : . ..: :.. .:: ::::. KIAA11 PFGFPGDGMQ-QPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFP 130 140 150 160 170 180 390 400 410 420 430 440 FLJ003 PSSSVPYMSPNQEVKSPFLPDLKPNLNSFHSSPSGSGPCDELRLTFPVRDGVVLEPFRLQ : .. : . :. :..:: ... . . . ..: . :... : .: KIAA11 PMAQ-PVIPPTPPVQQPFQASFQAQNEPLTQKPHQQ----EMEVEQPC----------IQ 190 200 210 220 450 460 470 480 490 500 FLJ003 HNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIE . :. :. . : : .. : . . . . :. . . . .: . KIAA11 E---VKRHMSDNRKSRSRSASRSPKRR-RSRSGSRSRRSRHRRSRSRSRDRRRHSPRS-- 230 240 250 260 270 280 510 520 530 540 550 FLJ003 RGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPS---VRSVLQ--GLL :.... ... .. : : .. ... : . :.: :: .: . : :.:. : . KIAA11 RSQERRDREKERERR--QKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPI 290 300 310 320 330 560 570 580 590 600 610 FLJ003 KK-RLLPAEHC--ITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPA .. ..: . : :. ..:. . .. :. :.: .::.. KIAA11 ESINMIPPRGCAYIVMVHRQDAYRALQKLS--RGNYKVNQKSIKIAWAL----------N 340 350 360 370 380 620 630 640 650 660 670 FLJ003 RGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSDYEE .: . : .:.: :. : .: .. :.... : .. .:: KIAA11 KGIKADYKQYWDVE----LGVTYIPW-----DK---VKPEELESFCEGGML---DSD--- 390 400 410 420 680 690 700 710 720 730 FLJ003 ITIDPTCSWKPVPVKPDMHIKEEPDGPALKRCRTVSPAHVLMPSVMEMIAALGPGAAPFA :..: .:: .: ::. .. .. : .. . ::: .: . : . .: ..: KIAA11 -TLNP--DWKGIPKKPENEVAQN-GGAETSHTEPVSPIPKPLPVPVPPIPVPAPITVP-P 430 440 450 460 470 480 740 750 760 770 780 790 FLJ003 PLQPPSVPAPSDYPG-QGSSFLGP-GTFPESFPPTTPSTPTLAEFT-PGPPPISYQSDIP : :: :.: . : .: : : : .: : .: : : :: :. .: KIAA11 PQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPM----HLP 490 500 510 520 530 800 810 820 830 840 FLJ003 SSLLTSEKSTACLPSQMAPAGHLDPTHNP----GTPGLHTSN-----LGA--PPGPQLHH ..: : : : : : :. : :. :. ::. . KIAA11 PGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNL 540 550 560 570 580 590 850 860 870 880 890 FLJ003 SNPPPASRQSL-GQASLGPTGELAF-SPATGVMG--P---PSMSGAGEAPEPALD---LL .:: .. :: : ...: ... .:.::..: : : . : : : :. :. KIAA11 PTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARPGLIPLQRPPG-MPPPHLQRFPLM 600 610 620 630 640 650 900 910 920 FLJ003 PELTNPDELLSYLGPPDLPTNNNDDLLSLFENN : : ... . ::: : KIAA11 PPRPMPPHMM-HRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPE 660 670 680 690 700 710 >>KIAA0595 ( 1666 res) hj02929s1 (1666 aa) initn: 138 init1: 99 opt: 205 Z-score: 104.9 bits: 31.5 E(): 1.2 Smith-Waterman score: 205; 29.386% identity (45.614% similar) in 228 aa overlap (680-891:834-1044) 650 660 670 680 690 700 FLJ003 TALLEGLEVDQYMLGILIYIQNSDYEEITIDPTCSWKPVPVKPDMHIKEEPDGPALKR-- .: : ::: .: .. . . : : : KIAA05 AKKTALQRSPETPLEICLVPVGPSPASPSPEPPVS-KPVASSPTEQVPSQ-EMPLLARPS 810 820 830 840 850 860 710 720 730 740 750 760 FLJ003 --CRTVSPAHVLMPSVMEMI----AALG-PGAAPFAPLQPPSVPAPSDYPGQGSSFLGPG ..:::: ::. . ..:: : . : ::::::.: : : . : . KIAA05 PPVQSVSPAVPTPPSMSAALPFPAGGLGMPPSLPPPPLQPPSLPL-SMGPVLPDPFTHYA 870 880 890 900 910 920 770 780 790 800 810 820 FLJ003 TFPESFPPTTPSTPTLAEFTPGPPPISYQSDIPSSLLTSEKSTACLPSQMAPAGHLDPTH .: :.: .:. : :: . : :.. . .: : . ..: KIAA05 PLP-SWPCYPHVSPSGYPCLPPPPTVPLVSGTPGAYAV---PPTCSVPWAPPPAPVSPYS 930 940 950 960 970 830 840 850 860 870 FLJ003 NPGTPGLHTSNLGAPPGPQLHHSN------PPPASRQSLGQASLGPTGELAFSPATGVMG . : : :: :::: :. ::: :.:.: : : .:: : KIAA05 STCTYG----PLGWGPGPQ--HAPFWSTVPPPPLPPASIGRAVPQPKMESRGTPA----G 980 990 1000 1010 1020 880 890 900 910 920 FLJ003 PP-SMSGAGEAPEPALDLLPELTNPDELLSYLGPPDLPTNNNDDLLSLFENN :: .. . :: .: : KIAA05 PPENVLPLSMAPPLSLGLPGHGAPQTEPTKVEVKPVPASPHPKHKVSALVQSPQMKALAC 1030 1040 1050 1060 1070 1080 >>KIAA0669 ( 825 res) hk02346 (825 aa) initn: 158 init1: 94 opt: 191 Z-score: 102.0 bits: 30.0 E(): 1.7 Smith-Waterman score: 275; 25.446% identity (48.214% similar) in 448 aa overlap (3-421:308-727) 10 20 30 FLJ003 AAPLPMNSMNPMKPALPPAPHGDGSFAYESVP : .:.. .: :: : : :. : :.: KIAA06 QGAHGPESGTDSSLTAVSQLPPSEKMSQPTPAQPQSFSVGQPQPPPPPVG-GAVAQSSAP 280 290 300 310 320 330 40 50 60 70 80 FLJ003 ---WQQSATQPAGSLSVVTTVWGVGNATQSQVLGNPMGPAGSPSGS-SMMPGVAGGSSAL . .:: : .... : . .:.: ..:. : .:: : :. : KIAA06 LPPFPGAATGPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAA 340 350 360 370 380 390 90 100 110 120 130 140 FLJ003 TSPQCLGQQAFAEGGANKGYVQQGVYSRGGYPGAPGFTTGYAGGP-GGLGLPSHAARPST .:: : :. . :.. : :. . : .:: :: :.::. KIAA06 QQPQ---QFAYPQPQIPPGHL---------LPVQPSGQSEYLQQHVAGLQPPS-PAQPSS 400 410 420 430 440 150 160 170 180 190 200 FLJ003 DFTQAAAAAAVAAAAATATATATATVAALQEKQSQELSQYGAMGAGQSFNSQFLQHGGPR : :::. :.::. ..:. ...:.: :.. :. : .: . .:: KIAA06 --TGAAASPATAATLPVGTGQNASSVGAQLMGASSQPSEAMAPRTGPA-------QGGQV 450 460 470 480 490 210 220 230 240 250 FLJ003 GPSVPAGMNPTGIGGV----MGPSGLS-PLAMNPTRAAGMTPLYAGQRLPQH---GYPGP .: :.:. :. .::: .::.: . : .. : . .: :: : :. : :. KIAA06 APCQPTGVPPATVGGVVQPCLGPAGAGQPQSVPPPQMGGSGPLSAVPGGPHAVVPGVPNV 500 510 520 530 540 550 260 270 280 290 300 310 FLJ003 PQAQPLPRQGVKRTYSEVYPG-----QQYLQGGQYAP--STAQFAPSPGQPPAPSPSYPG : : : : : : ..:. : : ....: .... : : ::. KIAA06 PAAVPAPSVPSVSTTSVTMPNVPAPLAQSQQLSSHTPVSRSSSIIQHVGLPLAPGTHSAP 560 570 580 590 600 610 320 330 340 350 360 FLJ003 HRLP---LQQGMTQSLSVPGPTGLHYKPTEQFNGQGASFNGGSVSYSQPGLSGPTRSIPG :: :.: .::. . : . . .: . :. .. ..: .. :. . . KIAA06 TSLPQSDLSQFQTQTQPLVGQVDDTRRKSEPLPQPPLSL----IAENKPVVKPPVADSLA 620 630 640 650 660 670 370 380 390 400 410 420 FLJ003 YPSSPLPGNPTPPMTPSSSVPY-----MSPNQEVKSPF-LPDLKPNLNSFHSSPSGSGPC : . : : . : ..: .:. . : : :: . .:. .: ::.: KIAA06 NPLQLTPMNSLATSVFSIAIPVDGDEDRNPSTAFYQAFHLNTLKES-KSLWDSASGGGVV 680 690 700 710 720 430 440 450 460 470 480 FLJ003 DELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQ KIAA06 AIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSSNDQLSQ 730 740 750 760 770 780 >>FLJ00201 ( 705 res) sj04110 (705 aa) initn: 164 init1: 71 opt: 189 Z-score: 101.9 bits: 29.7 E(): 1.8 Smith-Waterman score: 332; 27.069% identity (48.098% similar) in 447 aa overlap (13-422:106-528) 10 20 30 FLJ003 AAPLPMNSMNPMKPAL--PPAPHGDGSFAY---ESVPWQQSA ::.: :.: : .:. . : . FLJ002 DLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGK 80 90 100 110 120 130 40 50 60 70 80 90 FLJ003 TQPAGSLSVVTTVWGVGNATQSQVLGNPMGPAGSPSGSSM-MPGVAGGSSALTSPQCLGQ . : :. . : . .: : .: :: : :. :.. .:: :.... : :. FLJ002 VGPPGQ----PGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGE 140 150 160 170 180 190 100 110 120 130 140 150 FLJ003 QAF-AEGG--ANKGYVQQGVYSRGGYPGAPGFTTGYAGGPGGLGLPSHAARPSTDFTQAA . .: : ...: .. .. : ::::: : : :: :: :. ..:. : .: FLJ002 PGPQGEPGPPGDRGLKGDNGVGQPGLPGAPG--QGGAPGPPGLPGPAGLGKPGLDGLPGA 200 210 220 230 240 160 170 180 190 200 FLJ003 AAAAVAAAAATATATATATVAALQEKQSQELSQYGAMGA----GQSFNSQFLQHGGPRGP . . .. .. . .:. : .. :. :: : . : . : ::: FLJ002 PGDK-GESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGP 250 260 270 280 290 300 210 220 230 240 250 260 FLJ003 SVPAGMNPTGIG--GVMGPSGLSPLAMNP----TRAAGMTPLYAGQRLPQH--GYPGPPQ :. ..::: : :. ::.: : : :. :.. :: : :: : FLJ002 --PGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPG 310 320 330 340 350 360 270 280 290 300 310 320 FLJ003 AQPLP-RQGVKRTYSEVYPGQQYLQGGQYAPSTAQFAPSPGQPPAPSPSYPGHRLPLQQG . :: :.: .:. :: : .:. : :. . :: .: ..: FLJ002 SAGLPGRRGPPGPKGEAGPG-----GPPGVPGI-----RGDQGPSGLAGKPG--VPGERG 370 380 390 400 410 330 340 350 360 370 FLJ003 MTQSLSVPGPTGLHYKPTEQFNGQ-------GASFNGGSVSY-SQPGLSGPTRSIPGY-- . . . ::::: . .: :.:. :: . :... .:::: ::. .::: FLJ002 LPGAHGPPGPTGPKGEPG--FTGRPGGPGVAGALGQKGDLGLPGQPGLRGPS-GIPGLQG 420 430 440 450 460 470 380 390 400 410 420 FLJ003 PSSP-----LPGNPTPPMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSFHSSPSGSGPCDE :..: ::: : :. . . . .: : :. .. . :. :: FLJ002 PAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGP 480 490 500 510 520 530 430 440 450 460 470 480 FLJ003 LRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQFKCYHHEDRQMN FLJ002 PGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASG 540 550 560 570 580 590 >>KIAA0613 ( 734 res) hg01088b (734 aa) initn: 167 init1: 85 opt: 182 Z-score: 98.8 bits: 29.2 E(): 2.6 Smith-Waterman score: 198; 22.926% identity (48.035% similar) in 458 aa overlap (3-422:93-526) 10 20 30 FLJ003 AAPLPMNSMNP-MKPALPPAPHGDGSFAYESV :.:... : .. :: :: .. KIAA06 NTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKD----PAL 70 80 90 100 110 40 50 60 70 80 FLJ003 PWQQSATQPAGSLSVVTTVWGVGNATQSQVLGNPMGPAGS-PSGSSMM-----PGVAGGS . : . :. : . .. : . : ..:: : ::. : . :: .: KIAA06 DTNGSLVAPSPSPEARASPGTPG----TPELRPTFSPAFSRPSAFSSLAEASDPGPPRAS 120 130 140 150 160 170 90 100 110 120 130 FLJ003 -SALTSPQ----CLGQQAFAEGGANKGYVQQ-GVYS-RGGYPGAPGFTTGYAGGPGGLGL : :::. :: .:. .. . : . :.:: . : . . : .:.:: KIAA06 LRAKTSPEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGL 180 190 200 210 220 230 140 150 160 170 180 190 FLJ003 PSHAARPSTDFTQAAAAAAVAAAAATATATATATVAALQEKQSQELSQYGAMGAGQSFNS :. .. : :. :. .:. . :. . . : ..:..:.. . .: .. KIAA06 PG-GSLPIKDL--AVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGT 240 250 260 270 280 290 200 210 220 230 240 250 FLJ003 QFLQHGGP---RGPSVPAGMNPTGIGGVMGP----SGLSPLAMNPTRAAGMTPLYAGQRL .:.: : :.: :. . . : :. : : .:. :. :.. KIAA06 EFMQDPDEEALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTA 300 310 320 330 340 350 260 270 280 290 300 FLJ003 PQHGYPGPPQAQPL--PRQGVKRTYSEVYPGQQYLQGGQYAPST-AQFAPSPGQPPAPSP . : ..: :: .. .:: . ... ::.: .... .:. : ::.: KIAA06 IASASTTAPASSPADSPRPQAS-SYSPAVAASS-------APATHTSYSEGPAAP-APKP 360 370 380 390 400 310 320 330 340 350 360 FLJ003 ---SYPGHRLPLQQGMTQSLSVPGPTGLHYKPTEQFNGQGASFNGGSVSYSQPGLSGPTR . . : . : . : :.: : .:.:: . . ... . . :. :: KIAA06 RVVTTASIRPSVYQPVPASTYSPSP-GANYSPTPYTPSPAPAYTPSPAPAYTPS-PVPTY 410 420 430 440 450 460 370 380 390 400 410 FLJ003 S---IPGYPSSPLPG-NPTP-------PMTPSSSVPYMSPNQEVKSPFLPDLKPNLNSFH . :.: :: :. ::.: : :.: :... .. .. : : . . : . KIAA06 TPSPAPAYTPSPAPNYNPAPSVAYSGGPAEPASRPPWVT-DDSFSQKFAPGKSTTSISKQ 470 480 490 500 510 420 430 440 450 460 470 FLJ003 SSPSGSGPCDELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLIMRPDLELQF . : : :: KIAA06 TLPRG-GPAYTPAGPQVPPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWH 520 530 540 550 560 570 925 residues in 1 query sequences 2210069 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:51:31 2009 done: Fri Feb 27 10:51:32 2009 Total Scan time: 0.780 Total Display time: 0.260 Function used was FASTA [version 34.26.5 April 26, 2007]