# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh07420.fasta.huge -Q ../query/FLJ00167.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00167, 181 aa vs ./tmplib.10216 library 2210813 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.3157+/-0.00481; mu= 10.2426+/- 0.324 mean_var=123.3038+/-27.383, 0's: 0 Z-trim: 0 B-trim: 82 in 1/39 Lambda= 0.115501 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0799 ( 2111 res) fg01615y1 (2111) 112 29.6 1.2 KIAA0858 ( 1557 res) hh02535 (1557) 105 28.2 2.2 KIAA1160 ( 351 res) hj01067 ( 351) 93 25.4 3.6 KIAA0122 ( 1010 res) ha03733 (1010) 98 26.8 3.8 FLJ00419 ( 229 res) sj09483 ( 229) 90 24.6 3.9 KIAA1155 ( 145 res) hh04176 ( 145) 83 23.2 6.6 KIAA2012 ( 555 res) ah04096 ( 555) 90 25.1 6.7 KIAA0702 ( 988 res) hg01814(revised) ( 988) 93 26.0 6.7 FLJ00313 ( 208 res) sh06759 ( 208) 84 23.6 7.3 KIAA0635 ( 864 res) hj03253 ( 864) 91 25.6 7.8 KIAA0577 ( 1043 res) hj00291 (1043) 91 25.7 8.7 KIAA0445 ( 1919 res) hg00102s1 (1919) 94 26.5 9 KIAA0682 ( 973 res) hk02879 ( 973) 89 25.3 11 KIAA0244 ( 2044 res) ha04644s1 (2044) 92 26.2 12 KIAA1789 ( 477 res) fh23186 ( 477) 84 24.1 12 KIAA0322 ( 1614 res) hg00462s1 (1614) 90 25.7 13 KIAA0580 ( 1631 res) hj00601s1 (1631) 90 25.7 13 KIAA1256 ( 1676 res) hh15293 (1676) 90 25.8 13 KIAA0687 ( 1175 res) hk02992 (1175) 88 25.2 13 KIAA1529 ( 1680 res) hh04104(revised) (1680) 89 25.6 15 KIAA1847 ( 564 res) bm00425 ( 564) 83 24.0 15 KIAA1295 ( 550 res) fg01760 ( 550) 82 23.8 17 KIAA1032 ( 1702 res) ff09715 (1702) 88 25.4 17 KIAA1715 ( 429 res) hh02382 ( 429) 80 23.3 18 KIAA0780 ( 1100 res) hk05362 (1100) 85 24.7 18 KIAA0835 ( 1167 res) hj05861 (1167) 84 24.6 21 KIAA0154 ( 692 res) ha03131 ( 692) 81 23.8 22 KIAA0612 ( 1810 res) hg00654s1 (1810) 86 25.1 22 KIAA0521 ( 1050 res) hg01387 (1050) 83 24.3 22 KIAA1708 ( 1657 res) fj17878y1 (1657) 85 24.9 23 KIAA0741 ( 1222 res) hk04024 (1222) 83 24.4 24 KIAA0983 ( 687 res) hj07256 ( 687) 79 23.4 27 FLJ00040 ( 1060 res) as00040 (1060) 81 24.0 28 KIAA0923 ( 626 res) hh02882 ( 626) 78 23.2 29 KIAA1598 ( 446 res) fj09914 ( 446) 76 22.7 29 KIAA1861 ( 979 res) fk12955 ( 979) 80 23.8 30 KIAA0432 ( 827 res) hh01859s1 ( 827) 79 23.5 30 KIAA0531 ( 999 res) hg03072 ( 999) 80 23.8 30 KIAA0035 ( 707 res) ha01976 ( 707) 78 23.3 31 FLJ00250 ( 332 res) sj08804 ( 332) 73 22.0 34 KIAA0249 ( 902 res) ha07006 ( 902) 78 23.4 36 KIAA0968 ( 527 res) hj06483 ( 527) 75 22.6 36 KIAA0055 ( 1120 res) ha01049 (1120) 79 23.7 36 KIAA1071 ( 675 res) hj05664s2 ( 675) 76 22.9 38 KIAA0730 ( 1004 res) hk03632 (1004) 78 23.5 38 FLJ00057 ( 575 res) as00057 ( 575) 75 22.7 38 KIAA1042 ( 1019 res) fh02877 (1019) 78 23.5 38 KIAA1915 ( 726 res) hf00664 ( 726) 76 23.0 39 KIAA2034 ( 1571 res) ah04445 (1571) 80 24.1 40 KIAA1873 ( 477 res) hk07219 ( 477) 73 22.2 43 >>KIAA0799 ( 2111 res) fg01615y1 (2111 aa) initn: 137 init1: 71 opt: 112 Z-score: 105.0 bits: 29.6 E(): 1.2 Smith-Waterman score: 112; 35.897% identity (64.103% similar) in 78 aa overlap (64-139:868-942) 40 50 60 70 80 90 FLJ001 GQLKNLTGSLGGGEDKGDGDKSAAEAQGMSREEYEEYQKQLVEEKMERDAQFTQRKAER- ..: :: .:: ::: .:. . .:. :: KIAA07 FLHLKKAAIVFQKQLRGQIARRVYRQLLAEKREQEEKKKQEEEEKKKREEEERERERERR 840 850 860 870 880 890 100 110 120 130 140 150 FLJ001 -ATLRSHFRDKYRLPKNETDESQIQMAGGDVELPRELAKMIEEDTEEEEEKASVLGQLAS : ::.. ... : :.. :. .: . ..:: ::: :. :. :: KIAA07 EAELRAQQEEETR--KQQELEA-LQKSQKEAELTRELEKQKENKQVEEILRLEKEIEDLQ 900 910 920 930 940 950 160 170 180 FLJ001 LPGLNLGSLKDKAQATLGDLKQSAEKCHVM KIAA07 RMKEQQELSLTEASLQKLQERRDQELRRLEEEACRAAQEFLESLNFDEIDECVRNIERSL 960 970 980 990 1000 1010 >>KIAA0858 ( 1557 res) hh02535 (1557 aa) initn: 113 init1: 58 opt: 105 Z-score: 100.1 bits: 28.2 E(): 2.2 Smith-Waterman score: 105; 24.615% identity (58.462% similar) in 130 aa overlap (19-145:563-684) 10 20 30 40 FLJ001 SRRGRARCLARGSRRPVPRPAKTMAFMVKTMVGGQLKNLTGSLGGGED : :. . . :: .... : :. KIAA08 QSWKLGTTVPPISFTPGPCSEADLKRWEAIREASRLRHKKRLMVERLFQKIYGENGS--- 540 550 560 570 580 50 60 70 80 90 100 FLJ001 KGDGDKSAAEAQGMSREEYEEYQK---QLVEEKMERDAQFTQRKAERATLRSHFRDKYRL :. .: :: ..:.. . .:::.:: :: :. .. . .... : .: . : .. : KIAA08 KSMSDVSAEDVQNLRQLRYEEMQKIKSQLKEQDQKWQDDLAKWKDRRKSYTSDLQKK--- 590 600 610 620 630 640 110 120 130 140 150 160 FLJ001 PKNETDESQIQMAGGDVELPRELAKMIEEDTEEEEEKASVLGQLASLPGLNLGSLKDKAQ :.: .: . : . . . . .:.. : : ...:..: KIAA08 -KEEREEIEKQALEKSKRSSKTFKEMLQ-DRESQNQKSTVPSRRRMYSFDDVLEEGKRPP 650 660 670 680 690 700 170 180 FLJ001 ATLGDLKQSAEKCHVM KIAA08 TMTVSEASYQSERVEEKGATYPSEIPKEDSTTFAKREDRVTTEIQLPSQSPVEEQSPASL 710 720 730 740 750 760 >>KIAA1160 ( 351 res) hj01067 (351 aa) initn: 101 init1: 59 opt: 93 Z-score: 96.5 bits: 25.4 E(): 3.6 Smith-Waterman score: 108; 26.923% identity (51.538% similar) in 130 aa overlap (14-141:158-273) 10 20 30 40 FLJ001 SRRGRARCLARGSRRPVPRPAKTMAFMVKTMVGGQLKNLTGSL ..:.: : :: : . .: . KIAA11 DHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAEL--------MKAIDFEY 130 140 150 160 170 50 60 70 80 90 100 FLJ001 GGGEDKGDGDKSAAEAQGMSREEYEEYQK-QLVEE-KMERDAQFTQRKAERATLRSHFRD : :. :: : .:::. . .:::. : ::.:.... . :. . . . KIAA11 YGYLDEDDGVIVPLE------QEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEIN 180 190 200 210 220 230 110 120 130 140 150 160 FLJ001 KYRLPKNETDESQIQMAGGDVELPRELAKMIEEDTEEEEEKASVLGQLASLPGLNLGSLK : . ..:.:: : ::: . .:.. . .: :: KIAA11 IYAVTEEESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQ 240 250 260 270 280 290 170 180 FLJ001 DKAQATLGDLKQSAEKCHVM KIAA11 AQSEEARRLLGCRSGTRPARSGSAPSPRATTAVPMGPSLPTTSPRGAPSCRCLTGLRM 300 310 320 330 340 350 >>KIAA0122 ( 1010 res) ha03733 (1010 aa) initn: 83 init1: 70 opt: 98 Z-score: 95.9 bits: 26.8 E(): 3.8 Smith-Waterman score: 101; 25.625% identity (49.375% similar) in 160 aa overlap (5-153:64-218) 10 20 30 FLJ001 SRRGRARCLARGSRRPVPRPAKTMAFMVKTMVGG :.. : :: : :: . : . . :: KIAA01 DSPGREESLQEASPRLADHGSSSGGGWEVKRSQRLRRGPSSPR-RPYQDMEYERR---GG 40 50 60 70 80 40 50 60 70 80 90 FLJ001 QLKNLTGSLGGGE-DKGDGDKSAAEAQGMSREEYEEYQKQL--VEEKMERDAQFTQRKAE . . :: :. . .. :: .. .. . . .:. : .. : : . : . ...:: KIAA01 R-GDRTGRYGATDRSQDDGGENRSRDHDYRDMDYRSYPREYGSQEGKHDYDDSSEEQSAE 90 100 110 120 130 140 100 110 120 130 140 FLJ001 RATLRSHFRDKYRLPKNETDESQIQMAG----GDVE----LPRELAKMIEEDTEEEEEKA . : . : . . .: : :: . .. . ::. ::::::: KIAA01 DSYEASPGSETQRRRRRRHRHSPTGPPGFPRDGDYRDQDYRTEQGEEEEEEEDEEEEEKA 150 160 170 180 190 200 150 160 170 180 FLJ001 SVLGQLASLPGLNLGSLKDKAQATLGDLKQSAEKCHVM : . .: :: KIAA01 SNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRW 210 220 230 240 250 260 >>FLJ00419 ( 229 res) sj09483 (229 aa) initn: 146 init1: 80 opt: 90 Z-score: 95.8 bits: 24.6 E(): 3.9 Smith-Waterman score: 90; 32.911% identity (58.228% similar) in 79 aa overlap (64-142:79-151) 40 50 60 70 80 90 FLJ001 GQLKNLTGSLGGGEDKGDGDKSAAEAQGMSREEYEEYQKQLVEEKMERDAQFTQRKAERA ::. .: ... :.. ::: . .:. :: FLJ004 IERFWRGGQYENFRVQYTETEPYHNYRERERERERENRQRERERERERDRERERRQRERE 50 60 70 80 90 100 100 110 120 130 140 150 FLJ001 TLRSHFRDKYRLPKNETDESQIQMAGGDVELPRELAKMIEEDTEEEEEKASVLGQLASLP : . ::: : ..: : . . : : : :. ..: :.:.:: FLJ004 RERERERDKERQRRKE--EWERERAKRD-EKDRQHR---DRDREKEREKEKGKPKPRSPQ 110 120 130 140 150 160 160 170 180 FLJ001 GLNLGSLKDKAQATLGDLKQSAEKCHVM FLJ004 PPSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKSPKKKLGVSVSPSRARRRRKTSASSA 170 180 190 200 210 220 >>KIAA1155 ( 145 res) hh04176 (145 aa) initn: 27 init1: 27 opt: 83 Z-score: 91.7 bits: 23.2 E(): 6.6 Smith-Waterman score: 83; 32.727% identity (65.455% similar) in 55 aa overlap (31-82:23-77) 10 20 30 40 50 FLJ001 SRRGRARCLARGSRRPVPRPAKTMAFMVKTMVGGQLKNLTGSLGGGEDKG-DG--DKSAA : :... : . :. . ::.: .: .: KIAA11 ALGGVAEYDLKEGLLVSPGSVIMNGSNMANTSPSVKSKEDQGLSGHDEKENP 10 20 30 40 50 60 70 80 90 100 110 FLJ001 EAQGMSREEYEEYQKQLVEEKMERDAQFTQRKAERATLRSHFRDKYRLPKNETDESQIQM :. : :. :....:. :: .:.: KIAA11 FAEYMWMENEEDFNRQVEEELQEQDFLDRCFQEMLDEEDQDWFIPSRDLPQAMGQLQQQL 60 70 80 90 100 110 >>KIAA2012 ( 555 res) ah04096 (555 aa) initn: 131 init1: 71 opt: 90 Z-score: 91.6 bits: 25.1 E(): 6.7 Smith-Waterman score: 98; 27.368% identity (63.158% similar) in 95 aa overlap (59-146:442-532) 30 40 50 60 70 80 FLJ001 KTMVGGQLKNLTGSLGGGEDKGDGDKSAAEAQGMSREEYEEYQKQLVEEKMERDAQFTQR :: .:.. ::....: : ..: : :. KIAA20 EEIRLRKQRLQEEQQRQEEEERKQQLRLKAAQERARQQQEEFRRKLRE--LQRKKQ--QE 420 430 440 450 460 90 100 110 120 130 140 FLJ001 KAERATLRSHFRDKYRLPKNETDESQIQMAGGD-VELPR------ELAKMIEEDTEEEEE .:::: ... ... .. .: .. ..:: . .: : : :.. :. ...:: KIAA20 EAERAEAEKQRQEELEMQLEEEQKHLMEMAEEERLEYQRRKQEAEEKARLEAEERRQKEE 470 480 490 500 510 520 150 160 170 180 FLJ001 KASVLGQLASLPGLNLGSLKDKAQATLGDLKQSAEKCHVM .:. : KIAA20 EAARLALEEATKQAQEQARYWIFGQQLP 530 540 550 >>KIAA0702 ( 988 res) hg01814(revised) (988 aa) initn: 218 init1: 92 opt: 93 Z-score: 91.5 bits: 26.0 E(): 6.7 Smith-Waterman score: 93; 33.962% identity (62.264% similar) in 53 aa overlap (34-84:824-876) 10 20 30 40 50 60 FLJ001 GRARCLARGSRRPVPRPAKTMAFMVKTMVGGQLKNLTGSL--GGGEDKGDGDKSAAEAQG :. :: .. ::: : ::... : . KIAA07 EDEGEIHAEDGEMKGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEE 800 810 820 830 840 850 70 80 90 100 110 120 FLJ001 MSREEYEEYQKQLVEEKMERDAQFTQRKAERATLRSHFRDKYRLPKNETDESQIQMAGGD . .:: :: :.. ::. :.. . KIAA07 QEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETRQKQAIYLFLLPIVFPLWLTVPDV 860 870 880 890 900 910 >>FLJ00313 ( 208 res) sh06759 (208 aa) initn: 79 init1: 47 opt: 84 Z-score: 90.9 bits: 23.6 E(): 7.3 Smith-Waterman score: 89; 27.049% identity (56.557% similar) in 122 aa overlap (48-163:41-152) 20 30 40 50 60 70 FLJ001 PRPAKTMAFMVKTMVGGQLKNLTGSLGGGEDKGDGDKSAAEAQGMS-REEYEEYQKQLVE :. . .. : .: :.: :. ..:: . FLJ003 SLQVAQQQAEELPQEREKLQVAQEELQRQRDRLEEEQEEAVQNGARVRRELERSHRQLEQ 20 30 40 50 60 70 80 90 100 110 120 130 FLJ001 EKMERDAQFTQ----RKA-ERATLRSHFRDKYRLPKNETDESQIQMAGGDVELPRELAKM . .:.. . :.: ::::. :: . :.:. :. . .: .:: ..:. FLJ003 LEGKRSVLAKELVEVREALSRATLQ---RDMLQAKKTEVAEALTKAEAGRMELELSVTKL 80 90 100 110 120 140 150 160 170 180 FLJ001 IEEDTEEEEEKASVLGQLASLPGLNLGSLKDKAQATLGDLKQSAEKCHVM . :.::. .:..: .:: . .:: FLJ003 -------RAEEASLQDSLSKLSALNESLAQDKLDLNCLVTQLEEEKAMLQGRQRQAEQEA 130 140 150 160 170 180 FLJ003 TVAPAEQEWLEELWLEQEVARQGLEGSL 190 200 >>KIAA0635 ( 864 res) hj03253 (864 aa) initn: 95 init1: 72 opt: 91 Z-score: 90.4 bits: 25.6 E(): 7.8 Smith-Waterman score: 91; 31.081% identity (63.514% similar) in 74 aa overlap (94-162:640-713) 70 80 90 100 110 120 FLJ001 REEYEEYQKQLVEEKMERDAQFTQRKAERATLRSHFRDKYRLPKNETDESQIQMAGGDVE : : :.:.. .: ..: .: . . . KIAA06 LHNRAEDWEVKAHQAEGESSSVRLELLSIDTERRHLRERVELLEKEIQEHINAHHAYESQ 610 620 630 640 650 660 130 140 150 160 170 FLJ001 ---LPRELAKMIEEDTEEEEEKASVLGQLASLPGL--NLGSLKDKAQATLGDLKQSAEKC . . .... :: ..:.:::.::..:.:: : .: : :: KIAA06 ISSMAKAMSRLEEELRHQEDEKATVLNDLSSLRELCIKLDSGKDIMTQQLNSKNLEFERV 670 680 690 700 710 720 180 FLJ001 HVM KIAA06 VVELENVKSESDLLKKQLSNERHTVKNLESLLATNRDKEFHSHLTSHEKDTEIQLLKEKL 730 740 750 760 770 780 181 residues in 1 query sequences 2210813 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:42:39 2009 done: Fri Feb 27 10:42:39 2009 Total Scan time: 0.350 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]