# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj00104.fasta.huge -Q ../query/FLJ00171.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00171, 396 aa
vs ./tmplib.10216 library
2210598 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 3.5861+/-0.00397; mu= 21.4194+/- 0.270
mean_var=83.7979+/-18.326, 0's: 0 Z-trim: 1 B-trim: 108 in 1/39
Lambda= 0.140106
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
KIAA1423 ( 616 res) fh08369(revised) ( 616) 108 31.6 0.19
KIAA1918 ( 516 res) hj01313 ( 516) 92 28.2 1.6
FLJ00385 ( 509 res) sj03289 ( 509) 91 28.0 1.8
KIAA0442 ( 1266 res) hh03913 (1266) 90 28.5 3.4
FLJ00214 ( 322 res) sj05155 ( 322) 83 26.1 4.5
KIAA1893 ( 800 res) fk04261 ( 800) 83 26.7 7.1
KIAA0233 ( 2035 res) ha04602 (2035) 86 28.0 7.5
FLJ00417 ( 600 res) sj06336 ( 600) 80 25.9 9.4
KIAA1868 ( 463 res) fj22550 ( 463) 79 25.5 9.4
KIAA1209 ( 1113 res) fg05970 (1113) 82 26.7 9.6
KIAA1781 ( 974 res) fg06971(revised) ( 974) 81 26.4 10
KIAA0572 ( 1872 res) hh02391 (1872) 83 27.3 11
FLJ00164 ( 822 res) sh07138 ( 822) 79 25.9 13
KIAA1894 ( 2977 res) ff08107 (2977) 83 27.7 14
KIAA1815 ( 881 res) ha00534 ( 881) 78 25.8 15
KIAA1702 ( 530 res) fj15966 ( 530) 76 25.0 15
KIAA1447 ( 1721 res) fh04686 (1721) 80 26.7 16
KIAA1003 ( 917 res) hk09911 ( 917) 77 25.6 18
KIAA1528 ( 740 res) hh03104(revised) ( 740) 76 25.2 18
KIAA0782 ( 1281 res) hk05405s1 (1281) 77 25.8 21
KIAA1298 ( 738 res) fg04206 ( 738) 75 25.0 21
KIAA0457 ( 845 res) hg00693 ( 845) 75 25.1 22
KIAA0123 ( 528 res) ha01523s1 ( 528) 72 24.2 27
KIAA0819 ( 989 res) hh01037 ( 989) 74 25.0 28
KIAA1907 ( 1737 res) ah00504 (1737) 76 25.8 28
FLJ00362 ( 638 res) sh04538 ( 638) 72 24.3 29
KIAA1740 ( 1119 res) pj00674 (1119) 74 25.1 29
FLJ00256 ( 856 res) sj09675 ( 856) 73 24.7 30
FLJ00222 ( 656 res) sj06165 ( 656) 72 24.3 30
KIAA1784 ( 1167 res) fh08226 (1167) 74 25.2 30
KIAA0140 ( 439 res) ha00520 ( 439) 70 23.6 32
KIAA0397 ( 1016 res) fj00010 (1016) 73 24.9 32
KIAA1352 ( 1212 res) fj01313 (1212) 73 25.0 35
KIAA0475 ( 438 res) hh00451 ( 438) 69 23.4 37
KIAA1891 ( 780 res) fk02783 ( 780) 71 24.3 37
FLJ00332 ( 201 res) sj03652 ( 201) 66 22.3 38
KIAA0386 ( 1085 res) hj00015 (1085) 72 24.7 38
FLJ00414 ( 1129 res) sg00016 (1129) 72 24.7 39
KIAA1813 ( 673 res) ph00819b ( 673) 70 24.0 40
KIAA0450 ( 1182 res) hj05822 (1182) 72 24.8 40
KIAA1056 ( 870 res) hh11792 ( 870) 70 24.1 45
KIAA0410 ( 505 res) hg01877 ( 505) 68 23.3 46
KIAA0954 ( 1183 res) hj05543s1 (1183) 71 24.6 46
KIAA0228 ( 681 res) ha04738 ( 681) 69 23.8 46
FLJ00091 ( 170 res) as00091 ( 170) 64 21.8 46
KIAA1656 ( 136 res) fg00806 ( 136) 63 21.4 48
KIAA0271 ( 202 res) ha06752 ( 202) 64 21.9 50
KIAA1762 ( 1460 res) fh27937(revised) (1460) 71 24.7 51
KIAA1666 ( 1003 res) fg02554 (1003) 69 24.0 56
FLJ00250 ( 332 res) sj08804 ( 332) 65 22.4 56
>>KIAA1423 ( 616 res) fh08369(revised) (616 aa)
initn: 96 init1: 57 opt: 108 Z-score: 119.4 bits: 31.6 E(): 0.19
Smith-Waterman score: 108; 24.265% identity (52.941% similar) in 136 aa overlap (25-154:312-444)
10 20 30 40 50
FLJ001 RRLSLRYRSGKMRSSLAPGVWFFRAFSR-DSWFRGLILLLTFLIYACYHMSRKP
:::: . ::: ....:::.. . : .
KIAA14 NYTQYTVIVGFEHLKLPIKGMNFTWKTYNPAFSRLEIWFRFFFVVLTFIVTCLFAHSLRK
290 300 310 320 330 340
60 70 80 90 100
FLJ001 ISIVKSRLHQNCSEQIKPI----NDTHSLNDTMWCSWAPFDKDN-YKELLGGVDNAFLIA
.:. ..:. . :. :: . . :: : :. .. .. . : .
KIAA14 FSMRDWGIEQKWMSVLLPLLLLYNDPFFPLSFLVNSWLPGMLDDLFQSMFLCALLLFWLC
350 360 370 380 390 400
110 120 130 140 150 160
FLJ001 YAIGMFISGVFGERLPLRYYLSAGMLLSGLFTSLFGLGYFWNIHELWYFVVIQVCNGLVQ
:. ..: :: : .:: .... :. . :: . ...::
KIAA14 VYHGIRVQG---ERKCLTFYLPKFFIVGLLWLASVTLGIWQTVNELHDPMYQYRVDTGNF
410 420 430 440 450
170 180 190 200 210 220
FLJ001 TTGWPSVVTCVGNWFGKGKRGFIMGIWNSHTSVGNILGSLIAGIWVNGQWGLSFIVPGII
KIAA14 QGMKVFFMVVAAVYILYLLFLIVRACSELRHMPYVDLRLKFLTALTFVVLVISIAILYLR
460 470 480 490 500 510
>>KIAA1918 ( 516 res) hj01313 (516 aa)
initn: 51 init1: 51 opt: 92 Z-score: 102.6 bits: 28.2 E(): 1.6
Smith-Waterman score: 92; 24.265% identity (51.471% similar) in 136 aa overlap (120-251:239-369)
90 100 110 120 130 140
FLJ001 DKDNYKELLGGVDNAFLIAYAIGMFISGVFGER-LPLRYYLSAGMLLSGLFTSLFGLGYF
:.: ::.: :: :.: . . .: .
KIAA19 AGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRNYFEEIGTY
210 220 230 240 250 260
150 160 170 180 190 200
FLJ001 WNIHELWYFVVIQVCNGLVQTTGWPSVVTC--VGNWFGKGKRGFIMGIWNSHTSVGNILG
..: ... . : : .::: ::. : :. . : ..: : : .
KIAA19 DAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATPYTFPG-GTGH--VINKNN
270 280 290 300 310 320
210 220 230 240 250 260
FLJ001 SLIAGIWVNGQWGLSFIV-PGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNP
.: .:.. . .:. ::.. . .: .. .. :.. : :
KIAA19 RRLAEVWMDEFKDFFYIISPGVVKVDYGDVSVRKTLR--ENLKCKPFSWYLENIYPDSQI
330 340 350 360 370 380
270 280 290 300 310 320
FLJ001 EDPGNSPCSIRESGLETVAKCSKGPCEEPAAISFFGALRIPGVVEFSLCLLFAKLVSYTF
KIAA19 PRRYYSLGEIRNVETNQCLDNMGRKENEKVGIFNCHGMGGNQVFSYTADKEIRTDDLCLD
390 400 410 420 430 440
>>FLJ00385 ( 509 res) sj03289 (509 aa)
initn: 45 init1: 45 opt: 91 Z-score: 101.6 bits: 28.0 E(): 1.8
Smith-Waterman score: 93; 30.693% identity (43.564% similar) in 101 aa overlap (249-338:51-150)
220 230 240 250 260 270
FLJ001 GLSFIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEP--AENQDNPEDPGNSPCSIR
: :: :: : . .: .:::
FLJ003 PNAREPRHWTLPGPSWIDKNQGASAPWAQLCPTPQSHGAISLAASTKGPSVFPLAPCSRS
30 40 50 60 70 80
280 290 300 310 320 330
FLJ001 ESGLETVAKC-SKGPCEEPAAISF-FGALRIPGVVEFSLCLLFAKLVSYTFLYWLP----
:: .. : : ::...:. ::: :: : : . : : . . .:
FLJ003 TSGGTAALGCLVKDYFPEPVTVSWNSGALT-SGVHTFPAVLQSSGLYSLSSVVTVPSSSL
90 100 110 120 130
340 350 360 370 380
FLJ001 ---LYIANVAHFSAKEAGDLSTLFDVGGIIDVPVQLHWPGRDCQLHSDADHLWGPGQWPI
: :: :
FLJ003 GTQTYTCNVNHKPSNTKVDKRVELKTPLGDTTHTCPRCPEPKSCDTPPPCPRCPEPKSCD
140 150 160 170 180 190
>>KIAA0442 ( 1266 res) hh03913 (1266 aa)
initn: 54 init1: 54 opt: 90 Z-score: 96.9 bits: 28.5 E(): 3.4
Smith-Waterman score: 90; 32.000% identity (53.333% similar) in 75 aa overlap (243-312:726-794)
220 230 240 250 260
FLJ001 WVNGQWGLSFIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNPE---DPG
:: . .:: ::. : :: .:
KIAA04 RPPGPSLFGAIHHPHDLARPSTLFSAAGAAHPTGTPFGPPPHHS----NFLNPAAHLEPF
700 710 720 730 740 750
270 280 290 300 310 320
FLJ001 NSPCSIRESGLETVAKCSKGPCEEPAAI--SFFGALRIPGVVEFSLCLLFAKLVSYTFLY
: : .. .:: .:. . : .:.. :.:: :.: .::
KIAA04 NRPSTF--TGLAAVGGNAFGGLGNPSVTPNSMFGHKDGPSVQNFSNPHEPWNRLHRTPPS
760 770 780 790 800
330 340 350 360 370 380
FLJ001 WLPLYIANVAHFSAKEAGDLSTLFDVGGIIDVPVQLHWPGRDCQLHSDADHLWGPGQWPI
KIAA04 FPTPPPWLKPGELERSASAAAHDRDRDVDKRDSSVSKDDKERESVEKRHSSHPSPAPVLP
810 820 830 840 850 860
>>FLJ00214 ( 322 res) sj05155 (322 aa)
initn: 71 init1: 71 opt: 83 Z-score: 94.6 bits: 26.1 E(): 4.5
Smith-Waterman score: 83; 32.692% identity (63.462% similar) in 52 aa overlap (252-301:162-207)
230 240 250 260 270 280
FLJ001 FIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNPEDPGNSPCSIRESGLE
::. : :.:.:..:: : :.:.:.
FLJ002 ECPQAPDSDPQEAESPLQAAAMDPQASDWSPQESGSPVETQESPEKAG------RRSSLQ
140 150 160 170 180
290 300 310 320 330
FLJ001 TVAKCS--KGPCEEPAAISFFGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIANVAHF
. :. . .:: . : ...:
FLJ002 SPASVAPPQGPGTKIQAPQLLGGETEGREAPQGELVPEARGLRQEGPEHKPGPSEPSSVQ
190 200 210 220 230 240
>>KIAA1893 ( 800 res) fk04261 (800 aa)
initn: 48 init1: 48 opt: 83 Z-score: 91.1 bits: 26.7 E(): 7.1
Smith-Waterman score: 83; 31.579% identity (49.123% similar) in 57 aa overlap (248-298:46-102)
220 230 240 250 260 270
FLJ001 WGLSFIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNPED-PGNSPCSIR
: : :... :: . .:.. ::
KIAA18 QKDSSPPGPRPTAFFCPQDGSLGAGSSAMRDYCPSQQKASPAPPRHTPDQSPGMESRHRS
20 30 40 50 60 70
280 290 300 310 320 330
FLJ001 ESGLETVAKCSKGP-----CEEPAAISFFGALRIPGVVEFSLCLLFAKLVSYTFLYWLPL
:: :.:: :: : :. .:
KIAA18 PSGAGEGASCSDGPRGSLACPSPTCFSPQESPSKETLEAHGASISGTPEATTSGKPEPVS
80 90 100 110 120 130
>>KIAA0233 ( 2035 res) ha04602 (2035 aa)
initn: 112 init1: 57 opt: 86 Z-score: 90.7 bits: 28.0 E(): 7.5
Smith-Waterman score: 95; 30.303% identity (54.545% similar) in 99 aa overlap (308-392:148-243)
280 290 300 310 320 330
FLJ001 SGLETVAKCSKGPCEEPAAISFFGALRIPGVVEFSLCLLFAKLVSYTFLYW-LPLYIANV
:: ... .:.: ::: . .: : :.
KIAA02 VYMFLFLLCLTLFQVYYSLWRKLLKAFWWLVVAYTMLVLIA---VYTFQFQDFPAYWRNL
120 130 140 150 160 170
340 350 360 370 380
FLJ001 AHFSAKEAGDL-------STLFD---VGG--IIDVPVQLHWPGRDCQLHSDADHLWGPG-
. :. .. ::: : ::. : : .. .:::. : . .: .:. ::
KIAA02 TGFTDEQLGDLGLEQFSVSELFSSILVPGFFLLACILQLHYFHRPFMQLTDMEHVSLPGT
180 190 200 210 220 230
390
FLJ001 QWPIRAHHHCCLC
. : ::..
KIAA02 RLPRWAHRQDAVSGTPLLREEQQEHQQQQQEEEEEEDSRDEGLGVATPHQATQVPEGAAK
240 250 260 270 280 290
>>FLJ00417 ( 600 res) sj06336 (600 aa)
initn: 113 init1: 59 opt: 80 Z-score: 88.9 bits: 25.9 E(): 9.4
Smith-Waterman score: 80; 26.667% identity (53.333% similar) in 75 aa overlap (249-319:456-528)
220 230 240 250 260 270
FLJ001 GLSFIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNPEDPG---NSPCSI
: . :: :..... :. :: ..: .
FLJ004 RERPPSPGPASRQAAIRQQPRARADSLGAPCCGLDPHGIPGRSREAPKGPGAWRQGPGGS
430 440 450 460 470 480
280 290 300 310 320 330
FLJ001 RESGLETVAKCSKG-PCEEPAAISFFGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIA
. .. . : : : . : :: : ::... . :::.
FLJ004 GSMSSDSSSPDSPGIPERSPRWPE--GACRQPGALQGEMSALFAQKLEEIRSKSPMFSAG
490 500 510 520 530 540
340 350 360 370 380 390
FLJ001 NVAHFSAKEAGDLSTLFDVGGIIDVPVQLHWPGRDCQLHSDADHLWGPGQWPIRAHHHCC
FLJ004 KPLLPCVVLPHAPGMAGPGSPAAASAWTVSPRVLVLVALYPWHCLRGTLLPWLACGP
550 560 570 580 590 600
>>KIAA1868 ( 463 res) fj22550 (463 aa)
initn: 62 init1: 62 opt: 79 Z-score: 88.9 bits: 25.5 E(): 9.4
Smith-Waterman score: 79; 32.500% identity (57.500% similar) in 40 aa overlap (252-291:376-413)
230 240 250 260 270 280
FLJ001 FIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNPEDPGNSPCSIRESGLE
: : : . .. :.::::. . :: .
KIAA18 STPESCVSSSSAIIAKPGEWLPRGRQEEPRPAPTGTPRQPREAPQDPGNG-VTTRECASA
350 360 370 380 390 400
290 300 310 320 330 340
FLJ001 TVAKCSKGPCEEPAAISFFGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIANVAHFSA
. : ..::
KIAA18 FTCK-PRAPCTPEMLDWNPPKAKASVLAPLFSSCGPQQASRPGSTASSTRGLPSSQSHRK
410 420 430 440 450 460
>>KIAA1209 ( 1113 res) fg05970 (1113 aa)
initn: 52 init1: 52 opt: 82 Z-score: 88.7 bits: 26.7 E(): 9.6
Smith-Waterman score: 82; 31.915% identity (61.702% similar) in 47 aa overlap (51-97:1056-1100)
30 40 50 60 70 80
FLJ001 WFFRAFSRDSWFRGLILLLTFLIYACYHMSRKPISIVKSRLHQNCSEQIKPINDTHSLND
: : . :.:.: . : . : ::. .:::
KIAA12 RRRKSDSKFVDADFSDNVCSGNTLHSLNSPRTPKKPVNSKL--GLSPYLTPYNDSDKLND
1030 1040 1050 1060 1070 1080
90 100 110 120 130 140
FLJ001 TMWCSWAPFDKDNYKELLGGVDNAFLIAYAIGMFISGVFGERLPLRYYLSAGMLLSGLFT
.: . .: ... . :
KIAA12 YLWRGPSPNQQNIVQSLREKFQCLSSSSFA
1090 1100 1110
396 residues in 1 query sequences
2210598 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 10:43:24 2009 done: Fri Feb 27 10:43:25 2009
Total Scan time: 0.500 Total Display time: 0.070
Function used was FASTA [version 34.26.5 April 26, 2007]