# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj00125.fasta.nr -Q ../query/FLJ00172.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00172, 1125 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7827070 sequences Expectation_n fit: rho(ln(x))= 5.5862+/-0.000185; mu= 12.4546+/- 0.010 mean_var=80.7167+/-15.814, 0's: 35 Z-trim: 38 B-trim: 10 in 1/66 Lambda= 0.142755 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676550|dbj|BAB84927.1| FLJ00172 protein [Homo (1125) 7257 1505.1 0 gi|119584555|gb|EAW64151.1| nucleoporin 210kDa, is (1886) 7257 1505.2 0 gi|119584556|gb|EAW64152.1| nucleoporin 210kDa, is (1887) 7257 1505.2 0 gi|116242720|sp|Q8TEM1.3|PO210_HUMAN RecName: Full (1887) 7249 1503.6 0 gi|168273116|dbj|BAG10397.1| nucleoporin 210kDa [s (1887) 7238 1501.3 0 gi|109034270|ref|XP_001083137.1| PREDICTED: simila (1887) 7137 1480.5 0 gi|30931086|gb|AAH52468.1| Nup210 protein [Mus mus (1842) 6196 1286.7 0 gi|97180293|sp|Q9QY81.2|PO210_MOUSE RecName: Full= (1886) 6196 1286.7 0 gi|148666876|gb|EDK99292.1| nucleoporin 210 [Mus m (1883) 6191 1285.7 0 gi|6650678|gb|AAF21969.1|AF113751_1 nuclear pore m (1886) 6139 1274.9 0 gi|121534|sp|P11654.1|PO210_RAT RecName: Full=Nucl (1886) 6106 1268.2 0 gi|126336534|ref|XP_001378689.1| PREDICTED: simila (1903) 5664 1177.1 0 gi|118096826|ref|XP_414320.2| PREDICTED: similar t (1883) 5239 1089.6 0 gi|73984954|ref|XP_541746.2| PREDICTED: similar to (3034) 4473 932.0 0 gi|194221037|ref|XP_001914906.1| PREDICTED: simila (1839) 4241 884.0 0 gi|47223214|emb|CAG11349.1| unnamed protein produc (1950) 3444 719.9 3.3e-204 gi|189540327|ref|XP_699573.3| PREDICTED: im:714133 ( 917) 3047 637.9 7.4e-180 gi|126307744|ref|XP_001372825.1| PREDICTED: simila (1901) 3015 631.6 1.3e-177 gi|149751306|ref|XP_001495971.1| PREDICTED: nucleo (1887) 2962 620.6 2.5e-174 gi|73961648|ref|XP_547570.2| PREDICTED: similar to (1888) 2960 620.2 3.3e-174 gi|109467041|ref|XP_001074975.1| PREDICTED: simila (1880) 2948 617.8 1.8e-173 gi|62643808|ref|XP_345235.2| PREDICTED: similar to (1881) 2948 617.8 1.8e-173 gi|94370127|ref|XP_622896.3| PREDICTED: similar to (1504) 2937 615.4 7.3e-173 gi|97180270|sp|Q9D2F7.2|P210L_MOUSE RecName: Full= (1881) 2937 615.5 8.7e-173 gi|194665312|ref|XP_001253717.2| PREDICTED: simila (1858) 2935 615.1 1.1e-172 gi|74747057|sp|Q5VU65.1|P210L_HUMAN RecName: Full= (1888) 2933 614.7 1.5e-172 gi|34535319|dbj|BAC87279.1| unnamed protein produc (1423) 2924 612.7 4.4e-172 gi|114559812|ref|XP_513837.2| PREDICTED: hypotheti (1888) 2919 611.8 1.1e-171 gi|34532201|dbj|BAC86345.1| unnamed protein produc (1591) 2893 606.4 4.1e-170 gi|50949320|emb|CAB55979.2| hypothetical protein [ ( 428) 2789 584.6 4e-164 gi|21739549|emb|CAD38812.1| hypothetical protein [ (1081) 2749 576.6 2.5e-161 gi|22761762|dbj|BAC11688.1| unnamed protein produc ( 418) 2700 566.2 1.3e-158 gi|119573623|gb|EAW53238.1| nucleoporin 210kDa-lik (1587) 2632 552.6 6.2e-154 gi|114559814|ref|XP_001144608.1| PREDICTED: hypoth (1736) 2618 549.8 4.9e-153 gi|118102172|ref|XP_001233384.1| PREDICTED: nucleo (1857) 2494 524.2 2.5e-145 gi|74178743|dbj|BAE34024.1| unnamed protein produc (1160) 2203 464.2 1.9e-127 gi|115653053|ref|XP_782857.2| PREDICTED: similar t (1872) 2011 424.8 2.2e-115 gi|210112018|gb|EEA59803.1| hypothetical protein B (1053) 1849 391.2 1.6e-105 gi|6599279|emb|CAB63757.1| hypothetical protein [H ( 684) 1809 382.9 3.3e-103 gi|55959264|emb|CAI14034.1| nucleoporin 210kDa-lik ( 669) 1798 380.6 1.6e-102 gi|210131363|gb|EEA79032.1| hypothetical protein B (1726) 1519 323.4 6.6e-85 gi|156218747|gb|EDO39640.1| predicted protein [Nem (1623) 1258 269.7 9.6e-69 gi|10438756|dbj|BAB15332.1| unnamed protein produc ( 465) 1183 253.8 1.6e-64 gi|119584558|gb|EAW64154.1| nucleoporin 210kDa, is ( 966) 1183 254.1 2.8e-64 gi|119584554|gb|EAW64150.1| nucleoporin 210kDa, is ( 967) 1183 254.1 2.8e-64 gi|45595564|gb|AAH67089.1| NUP210 protein [Homo sa ( 967) 1175 252.4 8.9e-64 gi|190588723|gb|EDV28745.1| hypothetical protein T (1883) 1147 246.8 8.2e-62 gi|198414653|ref|XP_002121532.1| PREDICTED: simila (1445) 992 214.8 2.7e-52 gi|215504456|gb|EEC13950.1| conserved hypothetical ( 530) 944 204.7 1.2e-49 gi|189535743|ref|XP_001919841.1| PREDICTED: simila ( 978) 926 201.1 2.5e-48 >>gi|18676550|dbj|BAB84927.1| FLJ00172 protein [Homo sap (1125 aa) initn: 7257 init1: 7257 opt: 7257 Z-score: 8069.9 bits: 1505.1 E(): 0 Smith-Waterman score: 7257; 100.000% identity (100.000% similar) in 1125 aa overlap (1-1125:1-1125) 10 20 30 40 50 60 FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAYDQEGRRFDNFSSLSIQWESTRPVLASIEPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAYDQEGRRFDNFSSLSIQWESTRPVLASIEPE 10 20 30 40 50 60 70 80 90 100 110 120 FLJ001 LPMQLVSQDDESGQKKLHGLQAILVHEASGTTAITATATGYQESHLSSARTKQPHDPLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LPMQLVSQDDESGQKKLHGLQAILVHEASGTTAITATATGYQESHLSSARTKQPHDPLVP 70 80 90 100 110 120 130 140 150 160 170 180 FLJ001 LSASIELILVEDVRVSPEEVTIYNHPGIQAELRIREGSGYFFLNTSTADVVKVAYQEARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LSASIELILVEDVRVSPEEVTIYNHPGIQAELRIREGSGYFFLNTSTADVVKVAYQEARG 130 140 150 160 170 180 190 200 210 220 230 240 FLJ001 VAMVHPLLPGSSTIMIHDLCLVFPAPAKAVVYVSDIQELYIRVVDKVEIGKTVKAYVRVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 VAMVHPLLPGSSTIMIHDLCLVFPAPAKAVVYVSDIQELYIRVVDKVEIGKTVKAYVRVL 190 200 210 220 230 240 250 260 270 280 290 300 FLJ001 DLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQTSLTASVTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 DLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQTSLTASVTN 250 260 270 280 290 300 310 320 330 340 350 360 FLJ001 KAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSISNESVALV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 KAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSISNESVALV 310 320 330 340 350 360 370 380 390 400 410 420 FLJ001 SAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRAPIMRMRTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 SAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRAPIMRMRTG 370 380 390 400 410 420 430 440 450 460 470 480 FLJ001 TQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLPSQYNFAMN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 TQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLPSQYNFAMN 430 440 450 460 470 480 490 500 510 520 530 540 FLJ001 VLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIEAEQILMSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 VLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIEAEQILMSP 490 500 510 520 530 540 550 560 570 580 590 600 FLJ001 NSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVIAQEPFGAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 NSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVIAQEPFGAN 550 560 570 580 590 600 610 620 630 640 650 660 FLJ001 QTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGDVFHAHSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 QTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGDVFHAHSSV 610 620 630 640 650 660 670 680 690 700 710 720 FLJ001 LNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPVLQAISPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPVLQAISPEL 670 680 690 700 710 720 730 740 750 760 770 780 FLJ001 SGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVTVYYEVAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 SGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVTVYYEVAGH 730 740 750 760 770 780 790 800 810 820 830 840 FLJ001 LRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTPTQREVIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTPTQREVIQA 790 800 810 820 830 840 850 860 870 880 890 900 FLJ001 LHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQRKHLSMKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQRKHLSMKK 850 860 870 880 890 900 910 920 930 940 950 960 FLJ001 TALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGAPEVLENLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 TALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGAPEVLENLE 910 920 930 940 950 960 970 980 990 1000 1010 1020 FLJ001 VKSGSPAVLAFAKEKSFGWPSFITYTVGVLDPAAGSQGPLSTTLTFSSPVTNQAIAIPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 VKSGSPAVLAFAKEKSFGWPSFITYTVGVLDPAAGSQGPLSTTLTFSSPVTNQAIAIPVT 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 FLJ001 VAFVVDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTPRDLAVPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 VAFVVDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTPRDLAVPAA 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 FLJ001 LTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH ::::::::::::::::::::::::::::::::::::::::::::: gi|186 LTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH 1090 1100 1110 1120 >>gi|119584555|gb|EAW64151.1| nucleoporin 210kDa, isofor (1886 aa) initn: 7257 init1: 7257 opt: 7257 Z-score: 8066.7 bits: 1505.2 E(): 0 Smith-Waterman score: 7257; 100.000% identity (100.000% similar) in 1125 aa overlap (1-1125:762-1886) 10 20 30 FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY :::::::::::::::::::::::::::::: gi|119 PFPAVEPAVVKFVCAPPSRLTLAPVYTSPQLDMSCPLLQQNKQVVPVSSHRNPLLDLAAY 740 750 760 770 780 790 40 50 60 70 80 90 FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG 800 810 820 830 840 850 100 110 120 130 140 150 FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA 860 870 880 890 900 910 160 170 180 190 200 210 FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV 920 930 940 950 960 970 220 230 240 250 260 270 FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA 980 990 1000 1010 1020 1030 280 290 300 310 320 330 FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI 1040 1050 1060 1070 1080 1090 340 350 360 370 380 390 FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV 1100 1110 1120 1130 1140 1150 400 410 420 430 440 450 FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW 1160 1170 1180 1190 1200 1210 460 470 480 490 500 510 FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR 1220 1230 1240 1250 1260 1270 520 530 540 550 560 570 FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV 1280 1290 1300 1310 1320 1330 580 590 600 610 620 630 FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA 1340 1350 1360 1370 1380 1390 640 650 660 670 680 690 FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG 1400 1410 1420 1430 1440 1450 700 710 720 730 740 750 FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA 1460 1470 1480 1490 1500 1510 760 770 780 790 800 810 FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA 1520 1530 1540 1550 1560 1570 820 830 840 850 860 870 FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP 1580 1590 1600 1610 1620 1630 880 890 900 910 920 930 FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF 1640 1650 1660 1670 1680 1690 940 950 960 970 980 990 FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL 1700 1710 1720 1730 1740 1750 1000 1010 1020 1030 1040 1050 FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF 1760 1770 1780 1790 1800 1810 1060 1070 1080 1090 1100 1110 FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK 1820 1830 1840 1850 1860 1870 1120 FLJ001 ASPPSGLWSPAYASH ::::::::::::::: gi|119 ASPPSGLWSPAYASH 1880 >>gi|119584556|gb|EAW64152.1| nucleoporin 210kDa, isofor (1887 aa) initn: 7257 init1: 7257 opt: 7257 Z-score: 8066.7 bits: 1505.2 E(): 0 Smith-Waterman score: 7257; 100.000% identity (100.000% similar) in 1125 aa overlap (1-1125:763-1887) 10 20 30 FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY :::::::::::::::::::::::::::::: gi|119 PFPAVEPAVVKFVCAPPSRLTLAPVYTSPQLDMSCPLLQQNKQVVPVSSHRNPLLDLAAY 740 750 760 770 780 790 40 50 60 70 80 90 FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG 800 810 820 830 840 850 100 110 120 130 140 150 FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA 860 870 880 890 900 910 160 170 180 190 200 210 FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV 920 930 940 950 960 970 220 230 240 250 260 270 FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA 980 990 1000 1010 1020 1030 280 290 300 310 320 330 FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI 1040 1050 1060 1070 1080 1090 340 350 360 370 380 390 FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV 1100 1110 1120 1130 1140 1150 400 410 420 430 440 450 FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW 1160 1170 1180 1190 1200 1210 460 470 480 490 500 510 FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR 1220 1230 1240 1250 1260 1270 520 530 540 550 560 570 FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV 1280 1290 1300 1310 1320 1330 580 590 600 610 620 630 FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA 1340 1350 1360 1370 1380 1390 640 650 660 670 680 690 FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG 1400 1410 1420 1430 1440 1450 700 710 720 730 740 750 FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA 1460 1470 1480 1490 1500 1510 760 770 780 790 800 810 FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA 1520 1530 1540 1550 1560 1570 820 830 840 850 860 870 FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP 1580 1590 1600 1610 1620 1630 880 890 900 910 920 930 FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF 1640 1650 1660 1670 1680 1690 940 950 960 970 980 990 FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL 1700 1710 1720 1730 1740 1750 1000 1010 1020 1030 1040 1050 FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF 1760 1770 1780 1790 1800 1810 1060 1070 1080 1090 1100 1110 FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK 1820 1830 1840 1850 1860 1870 1120 FLJ001 ASPPSGLWSPAYASH ::::::::::::::: gi|119 ASPPSGLWSPAYASH 1880 >>gi|116242720|sp|Q8TEM1.3|PO210_HUMAN RecName: Full=Nuc (1887 aa) initn: 7249 init1: 7249 opt: 7249 Z-score: 8057.8 bits: 1503.6 E(): 0 Smith-Waterman score: 7249; 99.911% identity (99.911% similar) in 1125 aa overlap (1-1125:763-1887) 10 20 30 FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY ::::::::::::::::::::::: :::::: gi|116 PFPAVEPAVVKFVCAPPSRLTLAPVYTSPQLDMSCPLLQQNKQVVPVSSHRNPRLDLAAY 740 750 760 770 780 790 40 50 60 70 80 90 FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG 800 810 820 830 840 850 100 110 120 130 140 150 FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA 860 870 880 890 900 910 160 170 180 190 200 210 FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV 920 930 940 950 960 970 220 230 240 250 260 270 FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA 980 990 1000 1010 1020 1030 280 290 300 310 320 330 FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI 1040 1050 1060 1070 1080 1090 340 350 360 370 380 390 FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV 1100 1110 1120 1130 1140 1150 400 410 420 430 440 450 FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW 1160 1170 1180 1190 1200 1210 460 470 480 490 500 510 FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR 1220 1230 1240 1250 1260 1270 520 530 540 550 560 570 FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV 1280 1290 1300 1310 1320 1330 580 590 600 610 620 630 FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA 1340 1350 1360 1370 1380 1390 640 650 660 670 680 690 FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG 1400 1410 1420 1430 1440 1450 700 710 720 730 740 750 FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA 1460 1470 1480 1490 1500 1510 760 770 780 790 800 810 FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA 1520 1530 1540 1550 1560 1570 820 830 840 850 860 870 FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP 1580 1590 1600 1610 1620 1630 880 890 900 910 920 930 FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF 1640 1650 1660 1670 1680 1690 940 950 960 970 980 990 FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL 1700 1710 1720 1730 1740 1750 1000 1010 1020 1030 1040 1050 FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF 1760 1770 1780 1790 1800 1810 1060 1070 1080 1090 1100 1110 FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK 1820 1830 1840 1850 1860 1870 1120 FLJ001 ASPPSGLWSPAYASH ::::::::::::::: gi|116 ASPPSGLWSPAYASH 1880 >>gi|168273116|dbj|BAG10397.1| nucleoporin 210kDa [synth (1887 aa) initn: 7238 init1: 7238 opt: 7238 Z-score: 8045.6 bits: 1501.3 E(): 0 Smith-Waterman score: 7238; 99.822% identity (99.822% similar) in 1125 aa overlap (1-1125:763-1887) 10 20 30 FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY :::::::::::::::::::::::::::::: gi|168 PFPAVEPAVVKFVCAPPSRLTLAPVYTSPQLDMSCPLLQQNKQVVPVSSHRNPLLDLAAY 740 750 760 770 780 790 40 50 60 70 80 90 FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|168 DQEGRRFDNFSSLSIQWESTRPVLASIEAELPMQLVSQDDESGQKKLHGLQAILVHEASG 800 810 820 830 840 850 100 110 120 130 140 150 FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA 860 870 880 890 900 910 160 170 180 190 200 210 FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV 920 930 940 950 960 970 220 230 240 250 260 270 FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA 980 990 1000 1010 1020 1030 280 290 300 310 320 330 FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI 1040 1050 1060 1070 1080 1090 340 350 360 370 380 390 FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV 1100 1110 1120 1130 1140 1150 400 410 420 430 440 450 FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW 1160 1170 1180 1190 1200 1210 460 470 480 490 500 510 FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR 1220 1230 1240 1250 1260 1270 520 530 540 550 560 570 FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV 1280 1290 1300 1310 1320 1330 580 590 600 610 620 630 FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA 1340 1350 1360 1370 1380 1390 640 650 660 670 680 690 FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG 1400 1410 1420 1430 1440 1450 700 710 720 730 740 750 FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA 1460 1470 1480 1490 1500 1510 760 770 780 790 800 810 FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA 1520 1530 1540 1550 1560 1570 820 830 840 850 860 870 FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP 1580 1590 1600 1610 1620 1630 880 890 900 910 920 930 FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF 1640 1650 1660 1670 1680 1690 940 950 960 970 980 990 FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVS 1700 1710 1720 1730 1740 1750 1000 1010 1020 1030 1040 1050 FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF 1760 1770 1780 1790 1800 1810 1060 1070 1080 1090 1100 1110 FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK 1820 1830 1840 1850 1860 1870 1120 FLJ001 ASPPSGLWSPAYASH ::::::::::::::: gi|168 ASPPSGLWSPAYASH 1880 >>gi|109034270|ref|XP_001083137.1| PREDICTED: similar to (1887 aa) initn: 7137 init1: 7137 opt: 7137 Z-score: 7933.1 bits: 1480.5 E(): 0 Smith-Waterman score: 7137; 97.511% identity (99.822% similar) in 1125 aa overlap (1-1125:763-1887) 10 20 30 FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY ::.::::::::::::::::::::::::::: gi|109 PFPAVEPAVVKFVCAPPSRLTLAPVYTSPQLDLSCPLLQQNKQVVPVSSHRNPLLDLAAY 740 750 760 770 780 790 40 50 60 70 80 90 FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG 800 810 820 830 840 850 100 110 120 130 140 150 FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA :::::::::::::::::.::::::::::::.::::::::::::::::::::::::::.:: gi|109 TTAITATATGYQESHLSAARTKQPHDPLVPVSASIELILVEDVRVSPEEVTIYNHPGVQA 860 870 880 890 900 910 160 170 180 190 200 210 FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ELRVREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV 920 930 940 950 960 970 220 230 240 250 260 270 FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|109 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLQAASPIITLVA 980 990 1000 1010 1020 1030 280 290 300 310 320 330 FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI :::.::::::::::.::.:::::::::::::::::::::::::::::::::::::::::: gi|109 LDEVLDNYTITFLIHGVTIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI 1040 1050 1060 1070 1080 1090 340 350 360 370 380 390 FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV ::::::::::::::::::::::::::::::::::::.:::.::::::::::::::::::: gi|109 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVRGLAVGNGTVSGLVQAVDAETGKV 1100 1110 1120 1130 1140 1150 400 410 420 430 440 450 FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPVYVTGITNHQNPFSFGNAVPGLTFHW 1160 1170 1180 1190 1200 1210 460 470 480 490 500 510 FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|109 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKPVDPTSGQLYGLAR 1220 1230 1240 1250 1260 1270 520 530 540 550 560 570 FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV 1280 1290 1300 1310 1320 1330 580 590 600 610 620 630 FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA 1340 1350 1360 1370 1380 1390 640 650 660 670 680 690 FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|109 LVAVPLGMTVTFTVHFHDNSGDVFHAHNSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG 1400 1410 1420 1430 1440 1450 700 710 720 730 740 750 FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|109 LTLLRVWDAEHPGLSDFVPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA 1460 1470 1480 1490 1500 1510 760 770 780 790 800 810 FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|109 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVGVPQRIMARHLHPIQTSFQEA 1520 1530 1540 1550 1560 1570 820 830 840 850 860 870 FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPEALISCQSQFKPAVFDFPSQDVFTVEP 1580 1590 1600 1610 1620 1630 880 890 900 910 920 930 FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF :::.:::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|109 QFDAALGQYFCSITMHRLTDKQRKHLSMKKTALVVTASLSSSHFSTEQVGAEVPFSPGLF 1640 1650 1660 1670 1680 1690 940 950 960 970 980 990 FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL ::::::::::::::::.:::::::::::::::::::::::::::::.:::::::::::. gi|109 ADQAEILLSNHYTSSEVRVFGAPEVLENLEVKSGSPAVLAFAKEKSLGWPSFITYTVGIS 1700 1710 1720 1730 1740 1750 1000 1010 1020 1030 1040 1050 FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF ::.::::::::::::::::.:::::.::::::::.::::::::::::::::::::::::: gi|109 DPVAGSQGPLSTTLTFSSPATNQAITIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFF 1760 1770 1780 1790 1800 1810 1060 1070 1080 1090 1100 1110 FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|109 TLFALLAGTAVMIIAYHTVCTPRDLAVPTALTPRASPGHSPHYFAASSPTSPNALPPARK 1820 1830 1840 1850 1860 1870 1120 FLJ001 ASPPSGLWSPAYASH ::::::::::::::: gi|109 ASPPSGLWSPAYASH 1880 >>gi|30931086|gb|AAH52468.1| Nup210 protein [Mus musculu (1842 aa) initn: 6163 init1: 6052 opt: 6196 Z-score: 6885.9 bits: 1286.7 E(): 0 Smith-Waterman score: 6196; 82.311% identity (95.644% similar) in 1125 aa overlap (1-1125:719-1842) 10 20 30 FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY ::.::::::::::::::::::::::::.:: gi|309 SISLSLLGPPASRNYQQHRVLMTCQALGEQLDLSCPLLQQNKQVVPVSSHRNPLLDLGAY 690 700 710 720 730 740 40 50 60 70 80 90 FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG ::.::::::::::::::::.::.::::: . ::::::::: .:::::::::.. :::::: gi|309 DQQGRRFDNFSSLSIQWESSRPLLASIELDQPMQLVSQDDGNGQKKLHGLQTVSVHEASG 750 760 770 780 790 800 100 110 120 130 140 150 FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA ::::.:::::::.:::: ::.:::::::::.::::::::::::::::::.:::::::.:. gi|309 TTAISATATGYQQSHLSEARVKQPHDPLVPVSASIELILVEDVRVSPEEMTIYNHPGVQV 810 820 830 840 850 860 160 170 180 190 200 210 FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV :: : :::::::::::: :..:::::..::::.::::::::::.:.:::::.:::::::. gi|309 ELYITEGSGYFFLNTSTQDIIKVAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPAKAI 870 880 890 900 910 920 220 230 240 250 260 270 FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA ..::::::::.::::::::::.:::::::::..::::::::: ::::::.::: :::::. gi|309 IHVSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKPFLAKYFTFMDLKLQAASQIITLVT 930 940 950 960 970 980 280 290 300 310 320 330 FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI ::::::::: :::..:::::::::.::::.:.:::..:.::::::::::::.::::::.: gi|309 LDEALDNYTATFLVHGVAIGQTSLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLII 990 1000 1010 1020 1030 1040 340 350 360 370 380 390 FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV :: ::.::::::::::::::::.::::: ::..:::.:: .:::.: :.::::::::::: gi|309 GAMMQITSEGGPQPQSNILFSINNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKV 1050 1060 1070 1080 1090 1100 400 410 420 430 440 450 FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW .:.:::::.:::: :.:::::::: :::::::::..:::::..:.::::::::::::::: gi|309 IIVSQDLVEVEVLQLQAVRIRAPITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHW 1110 1120 1130 1140 1150 1160 460 470 480 490 500 510 FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR ::::::::::::::::.::::: :::::::: :::::::::::::::.:::.:::.::.. gi|309 SVTKRDVLDLRGRHHEVSIRLPPQYNFAMNVYGRVKGRTGLRVVVKALDPTAGQLHGLGK 1170 1180 1190 1200 1210 1220 520 530 540 550 560 570 FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV :::::::.::::::.:::::::::::::::::.::::::::::: :::::::::::.:.: gi|309 ELSDEIQIQVFEKLRLLNPEIEAEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIV 1230 1240 1250 1260 1270 1280 580 590 600 610 620 630 FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA :.::::::.::: ::.::.:::::::::.::::.::::::::::::.:::::::::.::: gi|309 HTDEKGFLVSGSGIGVSTLEVIAQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEA 1290 1300 1310 1320 1330 1340 640 650 660 670 680 690 FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG :.:.:::::::: :::::.:::.::::.:::::::::::::::::: :::::..:::::: gi|309 LTALPLGMTVTFIVHFHDSSGDIFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVG 1350 1360 1370 1380 1390 1400 700 710 720 730 740 750 FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA ::::.:::.:: :::::.::::::::.::::::.::::.::::.::::: :.:::::::: gi|309 LTLLHVWDVEHLGLSDFVPLPVLQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSA 1410 1420 1430 1440 1450 1460 760 770 780 790 800 810 FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA . .:..:::::::.:: .::::::::.::.:.:.::.::..::.:.::.:: :::.::: gi|309 SHVLYVDPKTGVAIARDAGSVTVYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEA 1470 1480 1490 1500 1510 1520 820 830 840 850 860 870 FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP ::::: :.:::::::: :::.:.:::.:.:::::.::::: ::: :::::. ::::::: gi|309 TASKVTVSVGDRSSNLLGECSPAQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEP 1530 1540 1550 1560 1570 1580 880 890 900 910 920 930 FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF ::.:::::.::.::.:::::: :::.::::.:.:.::. ::. :.:.:::::::::::. gi|309 GFDAALGQYLCSVTMRRLTDKQLKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLY 1590 1600 1610 1620 1630 1640 940 950 960 970 980 990 FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL :.::::::::::::::..:::: : ::::::::::::::::.:::::: ::::::::::: gi|309 ANQAEILLSNHYTSSEVKVFGAVESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVL 1650 1660 1670 1680 1690 1700 1000 1010 1020 1030 1040 1050 FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF ::.:::::::::.::::::.:::::.::::::::.::::::::::::..::::::::::: gi|309 DPTAGSQGPLSTALTFSSPATNQAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFF 1710 1720 1730 1740 1750 1760 1060 1070 1080 1090 1100 1110 FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK :.::::::::: ::::::::.::.:: : :::::::: :::::.: :::.. :.:: .:: gi|309 TFFALLAGTAVTIIAYHTVCAPRELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRK 1770 1780 1790 1800 1810 1820 1120 FLJ001 ASPPSGLWSPAYASH ::::::::::::::: gi|309 ASPPSGLWSPAYASH 1830 1840 >>gi|97180293|sp|Q9QY81.2|PO210_MOUSE RecName: Full=Nucl (1886 aa) initn: 6135 init1: 6052 opt: 6196 Z-score: 6885.8 bits: 1286.7 E(): 0 Smith-Waterman score: 6196; 82.311% identity (95.644% similar) in 1125 aa overlap (1-1125:763-1886) 10 20 30 FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY ::.::::::::::::::::::::::::.:: gi|971 PFPAVEPTVVKSICAPPSRLTLMPVYALPQLDLSCPLLQQNKQVVPVSSHRNPLLDLGAY 740 750 760 770 780 790 40 50 60 70 80 90 FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG ::.::::::::::::::::.::.::::: . ::::::::: .:::::::::.. :::::: gi|971 DQQGRRFDNFSSLSIQWESSRPLLASIELDQPMQLVSQDDGNGQKKLHGLQTVSVHEASG 800 810 820 830 840 850 100 110 120 130 140 150 FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA ::::.:::::::.:::: ::.:::::::::.::::::::::::::::::.:::::::.:. gi|971 TTAISATATGYQQSHLSEARVKQPHDPLVPVSASIELILVEDVRVSPEEMTIYNHPGVQV 860 870 880 890 900 910 160 170 180 190 200 210 FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV :: : :::::::::::: :..:::::..::::.::::::::::.:.:::::.:::::::. gi|971 ELYITEGSGYFFLNTSTQDIIKVAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPAKAI 920 930 940 950 960 970 220 230 240 250 260 270 FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA ..::::::::.::::::::::.:::::::::..::::::::: ::::::.::: :::::. gi|971 IHVSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKPFLAKYFTFMDLKLQAASQIITLVT 980 990 1000 1010 1020 1030 280 290 300 310 320 330 FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI ::::::::: :::..:::::::::.::::.:.:::..:.::::::::::::.::::::.: gi|971 LDEALDNYTATFLVHGVAIGQTSLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLII 1040 1050 1060 1070 1080 1090 340 350 360 370 380 390 FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV :: ::.::::::::::::::::.::::: ::..:::.:: .:::.: :.::::::::::: gi|971 GAMMQITSEGGPQPQSNILFSINNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKV 1100 1110 1120 1130 1140 1150 400 410 420 430 440 450 FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW .:.:::::.:::: :.:::::::: :::::::::..:::::..:.::::::::::::::: gi|971 IIVSQDLVEVEVLQLQAVRIRAPITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHW 1160 1170 1180 1190 1200 1210 460 470 480 490 500 510 FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR ::::::::::::::::.::::: :::::::: :::::::::::::::.:::.:::.::.. gi|971 SVTKRDVLDLRGRHHEVSIRLPPQYNFAMNVYGRVKGRTGLRVVVKALDPTAGQLHGLGK 1220 1230 1240 1250 1260 1270 520 530 540 550 560 570 FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV :::::::.::::::.:::::::::::::::::.::::::::::: :::::::::::.:.: gi|971 ELSDEIQIQVFEKLRLLNPEIEAEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIV 1280 1290 1300 1310 1320 1330 580 590 600 610 620 630 FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA :.::::::.::: ::.::.:::::::::.::::.::::::::::::.:::::::::.::: gi|971 HTDEKGFLVSGSGIGVSTLEVIAQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEA 1340 1350 1360 1370 1380 1390 640 650 660 670 680 690 FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG :.:.:::::::: :::::.:::.::::.:::::::::::::::::: :::::..:::::: gi|971 LTALPLGMTVTFIVHFHDSSGDIFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVG 1400 1410 1420 1430 1440 1450 700 710 720 730 740 750 FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA ::::.:::.:: :::::.::::::::.::::::.::::.::::.::::: :.:::::::: gi|971 LTLLHVWDVEHLGLSDFVPLPVLQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSA 1460 1470 1480 1490 1500 1510 760 770 780 790 800 810 FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA . .:..:::::::.:: .::::::::.::.:.:.::.::..::.:.::.:: :::.::: gi|971 SHVLYVDPKTGVAIARDAGSVTVYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEA 1520 1530 1540 1550 1560 1570 820 830 840 850 860 870 FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP ::::: :.:::::::: :::.:.:::.:.:::::.::::: ::: :::::. ::::::: gi|971 TASKVTVSVGDRSSNLLGECSPAQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEP 1580 1590 1600 1610 1620 1630 880 890 900 910 920 930 FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF ::.:::::.::.::.:::::: :::.::::.:.:.::. ::. :.:.:::::::::::. gi|971 GFDAALGQYLCSVTMRRLTDKQLKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLY 1640 1650 1660 1670 1680 1690 940 950 960 970 980 990 FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL :.::::::::::::::..:::: : ::::::::::::::::.:::::: ::::::::::: gi|971 ANQAEILLSNHYTSSEVKVFGAVESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVL 1700 1710 1720 1730 1740 1750 1000 1010 1020 1030 1040 1050 FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF ::.:::::::::.::::::.:::::.::::::::.::::::::::::..::::::::::: gi|971 DPTAGSQGPLSTALTFSSPATNQAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFF 1760 1770 1780 1790 1800 1810 1060 1070 1080 1090 1100 1110 FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK :.::::::::: ::::::::.::.:: : :::::::: :::::.: :::.. :.:: .:: gi|971 TFFALLAGTAVTIIAYHTVCAPRELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRK 1820 1830 1840 1850 1860 1870 1120 FLJ001 ASPPSGLWSPAYASH ::::::::::::::: gi|971 ASPPSGLWSPAYASH 1880 >>gi|148666876|gb|EDK99292.1| nucleoporin 210 [Mus muscu (1883 aa) initn: 6130 init1: 6047 opt: 6191 Z-score: 6880.2 bits: 1285.7 E(): 0 Smith-Waterman score: 6191; 82.222% identity (95.644% similar) in 1125 aa overlap (1-1125:760-1883) 10 20 30 FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY ::.::::::::::::::::::::::::.:: gi|148 PFPAVEPTVVKSICAPPSRLTLMPVYALPQLDLSCPLLQQNKQVVPVSSHRNPLLDLGAY 730 740 750 760 770 780 40 50 60 70 80 90 FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG ::.::::::::::::::::.::.::::: . ::::::::: .:::::::::.. :::::: gi|148 DQQGRRFDNFSSLSIQWESSRPLLASIELDQPMQLVSQDDGNGQKKLHGLQTVSVHEASG 790 800 810 820 830 840 100 110 120 130 140 150 FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA ::::.:::::::.:::: ::.:::::::::.::::::::::::::::::.:::::::.:. gi|148 TTAISATATGYQQSHLSEARVKQPHDPLVPVSASIELILVEDVRVSPEEMTIYNHPGVQV 850 860 870 880 890 900 160 170 180 190 200 210 FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV :: : :::::::::::: :..:::::..::::.::::::::::.:.:::::.::::.::. gi|148 ELYITEGSGYFFLNTSTQDIIKVAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPTKAI 910 920 930 940 950 960 220 230 240 250 260 270 FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA ..::::::::.::::::::::.:::::::::..::::::::: ::::::.::: :::::. gi|148 IHVSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKPFLAKYFTFMDLKLQAASQIITLVT 970 980 990 1000 1010 1020 280 290 300 310 320 330 FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI ::::::::: :::..:::::::::.::::.:.:::..:.::::::::::::.::::::.: gi|148 LDEALDNYTATFLVHGVAIGQTSLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLII 1030 1040 1050 1060 1070 1080 340 350 360 370 380 390 FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV :: ::.::::::::::::::::.::::: ::..:::.:: .:::.: :.::::::::::: gi|148 GAMMQITSEGGPQPQSNILFSINNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKV 1090 1100 1110 1120 1130 1140 400 410 420 430 440 450 FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW .:.:::::.:::: :.:::::::: :::::::::..:::::..:.::::::::::::::: gi|148 IIVSQDLVEVEVLQLQAVRIRAPITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHW 1150 1160 1170 1180 1190 1200 460 470 480 490 500 510 FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR ::::::::::::::::.::::: :::::::: :::::::::::::::.:::.:::.::.. gi|148 SVTKRDVLDLRGRHHEVSIRLPPQYNFAMNVYGRVKGRTGLRVVVKALDPTAGQLHGLGK 1210 1220 1230 1240 1250 1260 520 530 540 550 560 570 FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV :::::::.::::::.:::::::::::::::::.::::::::::: :::::::::::.:.: gi|148 ELSDEIQIQVFEKLRLLNPEIEAEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIV 1270 1280 1290 1300 1310 1320 580 590 600 610 620 630 FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA :.::::::.::: ::.::.:::::::::.::::.::::::::::::.:::::::::.::: gi|148 HTDEKGFLVSGSGIGVSTLEVIAQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEA 1330 1340 1350 1360 1370 1380 640 650 660 670 680 690 FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG :.:.:::::::: :::::.:::.::::.:::::::::::::::::: :::::..:::::: gi|148 LTALPLGMTVTFIVHFHDSSGDIFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVG 1390 1400 1410 1420 1430 1440 700 710 720 730 740 750 FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA ::::.:::.:: :::::.::::::::.::::::.::::.::::.::::: :.:::::::: gi|148 LTLLHVWDVEHLGLSDFVPLPVLQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSA 1450 1460 1470 1480 1490 1500 760 770 780 790 800 810 FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA . .:..:::::::.:: .::::::::.::.:.:.::.::..::.:.::.:: :::.::: gi|148 SHVLYVDPKTGVAIARDAGSVTVYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEA 1510 1520 1530 1540 1550 1560 820 830 840 850 860 870 FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP ::::: :.:::::::: :::.:.:::.:.:::::.::::: ::: :::::. ::::::: gi|148 TASKVTVSVGDRSSNLLGECSPAQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEP 1570 1580 1590 1600 1610 1620 880 890 900 910 920 930 FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF ::.:::::.::.::.:::::: :::.::::.:.:.::. ::. :.:.:::::::::::. gi|148 GFDAALGQYLCSVTMRRLTDKQLKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLY 1630 1640 1650 1660 1670 1680 940 950 960 970 980 990 FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL :.::::::::::::::..:::: : ::::::::::::::::.:::::: ::::::::::: gi|148 ANQAEILLSNHYTSSEVKVFGAVESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVL 1690 1700 1710 1720 1730 1740 1000 1010 1020 1030 1040 1050 FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF ::.:::::::::.::::::.:::::.::::::::.::::::::::::..::::::::::: gi|148 DPTAGSQGPLSTALTFSSPATNQAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFF 1750 1760 1770 1780 1790 1800 1060 1070 1080 1090 1100 1110 FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK :.::::::::: ::::::::.::.:: : :::::::: :::::.: :::.. :.:: .:: gi|148 TFFALLAGTAVTIIAYHTVCAPRELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRK 1810 1820 1830 1840 1850 1860 1120 FLJ001 ASPPSGLWSPAYASH ::::::::::::::: gi|148 ASPPSGLWSPAYASH 1870 1880 >>gi|6650678|gb|AAF21969.1|AF113751_1 nuclear pore membr (1886 aa) initn: 6108 init1: 5995 opt: 6139 Z-score: 6822.3 bits: 1274.9 E(): 0 Smith-Waterman score: 6139; 81.689% identity (95.111% similar) in 1125 aa overlap (1-1125:763-1886) 10 20 30 FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY ::.::::::::::::::::::::::::.:: gi|665 PFPAVEPTVVKSICAPPSRLTLMPVYALPQLDLSCPLLQQNKQVVPVSSHRNPLLDLGAY 740 750 760 770 780 790 40 50 60 70 80 90 FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG ::.:::::::::::::::: .::::: . ::::::::: .:::::::::.. :::::: gi|665 DQQGRRFDNFSSLSIQWESFPRLLASIELDQPMQLVSQDDGNGQKKLHGLQTVSVHEASG 800 810 820 830 840 850 100 110 120 130 140 150 FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA ::::.:::::::.:::: ::.:::::::::.::::::::::::::::::.:::::::.:. gi|665 TTAISATATGYQQSHLSEARVKQPHDPLVPVSASIELILVEDVRVSPEEMTIYNHPGVQV 860 870 880 890 900 910 160 170 180 190 200 210 FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV :: : :::::::::::: :..:::::..::::.::::::::::.:.:::::.:::::::. gi|665 ELYITEGSGYFFLNTSTQDIIKVAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPAKAI 920 930 940 950 960 970 220 230 240 250 260 270 FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA . .:::::::.::::::::::.:::::::::..::::::::: ::::. .::: :::::. gi|665 IQLSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKPFLAKYFTFMDLNWQAASQIITLVT 980 990 1000 1010 1020 1030 280 290 300 310 320 330 FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI ::::::::: :::..: :::::::.::::.:.:::..:.::::::::::::.::::::.: gi|665 LDEALDNYTATFLVHGCAIGQTSLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLII 1040 1050 1060 1070 1080 1090 340 350 360 370 380 390 FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV :: ::.::::::::::::::::.::::: ::..:::.:: .:::.: :.::::::::::: gi|665 GAMMQITSEGGPQPQSNILFSINNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKV 1100 1110 1120 1130 1140 1150 400 410 420 430 440 450 FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW .:.:::::.:::: :.:::::::: :::::::::..:::::..:.::::::::::::::: gi|665 IIVSQDLVEVEVLQLQAVRIRAPITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHW 1160 1170 1180 1190 1200 1210 460 470 480 490 500 510 FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR ::::::::::::::::.::::: :::::::: :::::::::::.:::.:::.:::.::.. gi|665 SVTKRDVLDLRGRHHEVSIRLPPQYNFAMNVYGRVKGRTGLRVLVKALDPTAGQLHGLGK 1220 1230 1240 1250 1260 1270 520 530 540 550 560 570 FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV :::::::.::::::.:::::::::::::::::.::::::::::: :::::::::::.:.: gi|665 ELSDEIQIQVFEKLRLLNPEIEAEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIV 1280 1290 1300 1310 1320 1330 580 590 600 610 620 630 FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA :.::::::.::: ::.::.:::::::::.::::.::::::::::::.:::::::::.::: gi|665 HTDEKGFLVSGSGIGVSTLEVIAQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEA 1340 1350 1360 1370 1380 1390 640 650 660 670 680 690 FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG :.:.:::::::: :::::.:::.::::.:::::::::::::::::: :::::..:::::: gi|665 LTALPLGMTVTFIVHFHDSSGDIFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVG 1400 1410 1420 1430 1440 1450 700 710 720 730 740 750 FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA ::::.:::.:: :::::.::::::::.::::::.::::.::::.::::: :.:::::::: gi|665 LTLLHVWDVEHLGLSDFVPLPVLQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSA 1460 1470 1480 1490 1500 1510 760 770 780 790 800 810 FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA . .:..:::::::.:: .::::::::.::.:.:.::.::..::.:.::.:: :::.::: gi|665 SHVLYVDPKTGVAIARDAGSVTVYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEA 1520 1530 1540 1550 1560 1570 820 830 840 850 860 870 FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP ::::: :.:::::::: :::.:.:::.:.:::::.::::: ::: :::::. ::::::: gi|665 TASKVTVSVGDRSSNLLGECSPAQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEP 1580 1590 1600 1610 1620 1630 880 890 900 910 920 930 FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF ::.:::::.::.::.:::::: :::.::::.:.:.::. ::. :.:.:::::::::::. gi|665 GFDAALGQYLCSVTMRRLTDKQLKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLY 1640 1650 1660 1670 1680 1690 940 950 960 970 980 990 FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL :.::::::::::::::..:::: : ::::::::::::::::.:::::: ::::::::::: gi|665 ANQAEILLSNHYTSSEVKVFGAVESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVL 1700 1710 1720 1730 1740 1750 1000 1010 1020 1030 1040 1050 FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF ::.:::::::::.::::::.:::::.::::::::.::::::::::::..::::::::::: gi|665 DPTAGSQGPLSTALTFSSPATNQAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFF 1760 1770 1780 1790 1800 1810 1060 1070 1080 1090 1100 1110 FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK :.::::::::: ::::::::.::.:: : :::::::: :::::.: :::.. :.:: .:: gi|665 TFFALLAGTAVTIIAYHTVCAPRELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRK 1820 1830 1840 1850 1860 1870 1120 FLJ001 ASPPSGLWSPAYASH ::::::::::::::: gi|665 ASPPSGLWSPAYASH 1880 1125 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 15:57:41 2009 done: Fri Feb 27 16:06:59 2009 Total Scan time: 1210.230 Total Display time: 0.890 Function used was FASTA [version 34.26.5 April 26, 2007]