# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj01378.fasta.huge -Q ../query/FLJ00325.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00325, 89 aa vs ./tmplib.10216 library 2210905 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.7014+/-0.00291; mu= 11.2777+/- 0.196 mean_var=48.0782+/-10.754, 0's: 0 Z-trim: 1 B-trim: 159 in 1/39 Lambda= 0.184970 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0762 ( 724 res) hk04668s1 ( 724) 76 27.6 0.79 KIAA0423 ( 1723 res) hh01239s1 (1723) 76 28.0 1.4 FLJ00348 ( 778 res) sg00015 ( 778) 72 26.5 1.7 KIAA0562 ( 931 res) hh01779 ( 931) 71 26.4 2.4 KIAA1971 ( 830 res) fk08985 ( 830) 66 25.0 5.5 KIAA0620 ( 1985 res) hg04174 (1985) 69 26.2 5.8 KIAA1805 ( 534 res) fk00014 ( 534) 64 24.2 5.9 KIAA1354 ( 632 res) fj01502 ( 632) 64 24.3 6.6 KIAA0156 ( 963 res) ha03253 ( 963) 65 24.8 7.4 KIAA1268 ( 1023 res) hj07379 (1023) 65 24.8 7.7 KIAA1975 ( 597 res) aj01061 ( 597) 63 24.0 7.7 FLJ00168 ( 588 res) sh07625 ( 588) 62 23.7 9.1 KIAA1591 ( 1018 res) fj09118 (1018) 64 24.5 9.2 KIAA0372 ( 1568 res) hh00270 (1568) 65 25.0 10 KIAA0711 ( 661 res) hg00358 ( 661) 61 23.5 12 KIAA1451 ( 939 res) bg00289 ( 939) 62 24.0 13 KIAA0489 ( 192 res) hg01128 ( 192) 56 21.6 13 KIAA1824 ( 958 res) fh17057 ( 958) 61 23.7 15 FLJ00041 ( 330 res) as00041 ( 330) 57 22.1 16 FLJ00138 ( 309 res) sh03216 ( 309) 56 21.9 18 KIAA1334 ( 989 res) fh15842 ( 989) 60 23.4 19 KIAA0682 ( 973 res) hk02879 ( 973) 59 23.2 22 KIAA0526 ( 609 res) hg02163 ( 609) 57 22.4 24 FLJ00397 ( 150 res) sj06436 ( 150) 51 20.2 27 KIAA1654 ( 91 res) fh10218 ( 91) 49 19.4 28 FLJ00380 ( 791 res) sj00753 ( 791) 57 22.5 28 KIAA0209 ( 1842 res) ha04649 (1842) 60 23.7 29 KIAA1519 ( 648 res) fh13905s1 ( 648) 56 22.2 29 KIAA0757 ( 534 res) hk04606 ( 534) 55 21.8 31 KIAA0331 ( 814 res) hg00928 ( 814) 56 22.3 34 KIAA0932 ( 1078 res) hh04016s1 (1078) 57 22.7 35 KIAA1309 ( 639 res) fh10381 ( 639) 55 21.9 35 KIAA1485 ( 1104 res) fj07037 (1104) 57 22.7 35 KIAA0594 ( 1120 res) hj02896s1 (1120) 57 22.7 36 KIAA1484 ( 700 res) fj06928 ( 700) 55 22.0 37 KIAA0542 ( 1212 res) hg04325s1 (1212) 57 22.7 38 KIAA0442 ( 1266 res) hh03913 (1266) 57 22.8 39 KIAA0049 ( 969 res) ha01035 ( 969) 56 22.4 39 KIAA0226 ( 973 res) fg02838 ( 973) 56 22.4 39 KIAA1103 ( 453 res) hk10190 ( 453) 53 21.2 40 FLJ00016 ( 349 res) as00016 ( 349) 52 20.8 40 KIAA2003 ( 460 res) ah02593 ( 460) 53 21.2 41 KIAA0175 ( 656 res) ha02337 ( 656) 54 21.7 43 KIAA1099 ( 864 res) hk07834 ( 864) 55 22.1 43 FLJ00025 ( 955 res) as00025 ( 955) 55 22.1 46 KIAA0418 ( 989 res) hh00988 ( 989) 55 22.1 47 KIAA1063 ( 593 res) hj04848 ( 593) 53 21.3 48 KIAA0092 ( 475 res) ha01343 ( 475) 52 21.0 50 KIAA1306 ( 1154 res) fh05845 (1154) 55 22.2 52 KIAA0785 ( 706 res) hk05482 ( 706) 53 21.4 54 >>KIAA0762 ( 724 res) hk04668s1 (724 aa) initn: 58 init1: 58 opt: 76 Z-score: 108.2 bits: 27.6 E(): 0.79 Smith-Waterman score: 76; 31.915% identity (53.191% similar) in 47 aa overlap (11-57:675-720) 10 20 30 40 FLJ003 PSLITFQRAHRPWEKYSMVLTLVRDLKILQFKGVEKGFAK ::: .: : .. :.: : . KIAA07 KLRWREARESRRSEQLKEESEGEQFPGCRMRPWTAWSECTKLCGGGIQERYMTVKKRFKS 650 660 670 680 690 700 50 60 70 80 FLJ003 VQVKSTRSKKRAVRACSQKEAYLKFTRLKGHLGCVGQLVLWTELCVSPQ : : ..::. .:::. KIAA07 SQFTSCKDKKE-IRACNVHPC 710 720 >>KIAA0423 ( 1723 res) hh01239s1 (1723 aa) initn: 34 init1: 34 opt: 76 Z-score: 103.6 bits: 28.0 E(): 1.4 Smith-Waterman score: 76; 40.625% identity (60.938% similar) in 64 aa overlap (9-64:1270-1333) 10 20 30 FLJ003 PSLITFQRAHRPWEKYSMVLTLVRDL-----KILQFKG : . ::: :...: : .::. : KIAA04 VTHSPEIMDLSELRPFSKPEIALTEALRLLADEDWEKKIEGLNFIRCLAAFHSEILNTKL 1240 1250 1260 1270 1280 1290 40 50 60 70 80 FLJ003 VEKGFAKVQ-VKSTRSK-KRAVRAC-SQKEAYLKFTRLKGHLGCVGQLVLWTELCVSPQ : .:: :: ::. :: .::. .: :. .::: KIAA04 HETNFAVVQEVKNLRSGVSRAAVVCLSDLFTYLKKSMDQELDTTVKVLLHKAGESNTFIR 1300 1310 1320 1330 1340 1350 KIAA04 EDVDKALRAMVNNVTPARAVVSLINGGQRYYGRKMLFFMMCHPNFEKMLEKYVPSKDLPY 1360 1370 1380 1390 1400 1410 >>FLJ00348 ( 778 res) sg00015 (778 aa) initn: 32 init1: 32 opt: 72 Z-score: 102.0 bits: 26.5 E(): 1.7 Smith-Waterman score: 72; 29.825% identity (66.667% similar) in 57 aa overlap (12-68:100-151) 10 20 30 40 FLJ003 PSLITFQRAHRPWEKYSMVLTLVRDLKILQFKGVEKGFAKV ::.. . .: ::. : ::.. :. :. FLJ003 PLGPCSNDSRIQRHRKALLSKVGGGPELGGPWHRLASLL-LVEGLTDLQLR--EHDFT-- 70 80 90 100 110 120 50 60 70 80 FLJ003 QVKSTRSKKRAVRACSQKEAYLKFTRLKGHLGCVGQLVLWTELCVSPQ ::..::. . .:. . . .: ..:. FLJ003 QVEATRGGGHPARTVALDRLFLPLSRVSVPPRVSITIGVAGMGKTTLVRHFVRLWAHGQV 130 140 150 160 170 180 >>KIAA0562 ( 931 res) hh01779 (931 aa) initn: 70 init1: 70 opt: 71 Z-score: 99.6 bits: 26.4 E(): 2.4 Smith-Waterman score: 71; 23.077% identity (67.308% similar) in 52 aa overlap (31-78:667-718) 10 20 30 40 50 FLJ003 PSLITFQRAHRPWEKYSMVLTLVRDLKILQFKGVEKGFAKVQVKST----RSKKRAVRAC .: . .::::.. ..: :....:. KIAA05 RIILDMYRQHQASILEYLPPDDSNTRRNILYKTIFEGFAKIDGRATDAEMRARRKAATEE 640 650 660 670 680 690 60 70 80 FLJ003 SQKEAYLKFTRLKGHLGCVGQLVLWTELCVSPQ ..:. .. :.:.:. . .. KIAA05 AEKQKKEEIKALQGQLAALKEIQAEVQEKESDAVKPKNQDIQGGKAAPAEALGIPDEHYL 700 710 720 730 740 750 >>KIAA1971 ( 830 res) fk08985 (830 aa) initn: 34 init1: 34 opt: 66 Z-score: 93.0 bits: 25.0 E(): 5.5 Smith-Waterman score: 66; 20.690% identity (59.770% similar) in 87 aa overlap (3-87:295-380) 10 20 30 FLJ003 PSLITFQRAHRPWEKYSM-VLTLVRDLKILQF ...... . : . . ... ..:. . : KIAA19 QPFRAMREVATLCKLDILKSLDEDDLGPRRVVALEKEAEEWTRRAEEAVVSIQDITVNYF 270 280 290 300 310 320 40 50 60 70 80 FLJ003 KGVEKGFAKVQVKSTRSKKRAVRACSQKEAYLKFTRLKGHLG-CVGQLVLWTELCVSPQ : . :..: .: . .. :: .: . : .. .:. :. . ::. :::.. KIAA19 KETVKALAGMQKEMEQDAKRFGQA-AWATAIPRLEKLQLMLARETLQLMRAKELCLNHKR 330 340 350 360 370 380 KIAA19 AEIQGKMEDLPEQEKNTNVVDELEIQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLI 390 400 410 420 430 440 >>KIAA0620 ( 1985 res) hg04174 (1985 aa) initn: 38 init1: 38 opt: 69 Z-score: 92.7 bits: 26.2 E(): 5.8 Smith-Waterman score: 69; 28.814% identity (61.017% similar) in 59 aa overlap (7-65:1358-1411) 10 20 30 FLJ003 PSLITFQRAHRPWEKYSMVLTLVRDLKILQFKGVEK .::.: :.: .: ..... . ..: KIAA06 SETAIIVSIVICSVLLLLSVVALFVFCTKSRRAERYWQK---TLLQMEEMESQIREEIRK 1330 1340 1350 1360 1370 1380 40 50 60 70 80 FLJ003 GFAKVQVKSTRSKKRAVRACSQKEAYLKFTRLKGHLGCVGQLVLWTELCVSPQ :::..:. : :. : :: .:.. KIAA06 GFAELQTDMTDLTKELNR--SQGIPFLEYKHFVTRTFFPKCSSLYEERYVLPSQTLNSQG 1390 1400 1410 1420 1430 1440 >>KIAA1805 ( 534 res) fk00014 (534 aa) initn: 34 init1: 34 opt: 64 Z-score: 92.5 bits: 24.2 E(): 5.9 Smith-Waterman score: 64; 29.762% identity (52.381% similar) in 84 aa overlap (11-86:327-410) 10 20 30 FLJ003 PSLITFQRAHRPWEKYSMVLTLVRDLKILQFK--GVEKGF . : : ... :: : . :.. :. KIAA18 LESKSGGRVQRRSAKIAVYHLQELASAELAKEWPKRKVLQDLVPDDRKLKYTRPGLPTFS 300 310 320 330 340 350 40 50 60 70 80 FLJ003 AKVQVK-STRSKKRAVRACSQK--EA-YLKFTRLKGHLG-C-VGQLVLWTELCVSPQ .: : .: :: : .. :: : . . ::.::: : .:..: :. KIAA18 QEVLHKWKTDIKKYHRIQCPNQGCEAVYSSVSGLKAHLGSCTLGNFVAGKYKCLLCQKEF 360 370 380 390 400 410 KIAA18 VSESGVKYHINSVHAEDWFVVNPTTTKSFEKLMKIKQRQQEEEKRRQQHRSRRSLRRRQQ 420 430 440 450 460 470 >>KIAA1354 ( 632 res) fj01502 (632 aa) initn: 60 init1: 60 opt: 64 Z-score: 91.6 bits: 24.3 E(): 6.6 Smith-Waterman score: 64; 30.435% identity (58.696% similar) in 46 aa overlap (48-89:392-437) 20 30 40 50 60 70 FLJ003 MVLTLVRDLKILQFKGVEKGFAKVQVKSTRSKKRAVRACSQKEAYLKFTRLKGHLGCVGQ .: : . ..:....... ::::: :: KIAA13 NFLYVVGGQSNYDTKGKTAVDTVFRFDPRYNKWMQVASLNEKRTFFHLSALKGHLYAVGG 370 380 390 400 410 420 80 FLJ003 LVLWTEL----CVSPQ :: : .:. KIAA13 RSAAGELATVECYNPRMNEWSYVAKMSEPHYGHAGTVYGGLMYISGGITHDTFQNELMCF 430 440 450 460 470 480 >>KIAA0156 ( 963 res) ha03253 (963 aa) initn: 30 init1: 30 opt: 65 Z-score: 90.8 bits: 24.8 E(): 7.4 Smith-Waterman score: 65; 26.389% identity (65.278% similar) in 72 aa overlap (3-70:549-619) 10 20 FLJ003 PSLITFQRAHRPWEKYSMVL--TLVRDLKI-- :.:..:.. : ..... : .: .. KIAA01 RAHGDTQHCRKALHRAVQCTSDYPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNE 520 530 540 550 560 570 30 40 50 60 70 80 FLJ003 LQFKGVEKGFAKVQVKSTRSKKRAVRACSQKEAYLKFTRLKGHLGCVGQLVLWTELCVSP ..:..:: : :: . ....: :: ..:.: : ...: KIAA01 QRMKAAEKEAALVQQEEEKAEQRK-RARAEKKALKKKKKIRGPEKRGADEDDEKEWGDDE 580 590 600 610 620 630 FLJ003 Q KIAA01 EEQPSKRRRVENSIPAAGETQNVEVAAGPAGKCAAVDVEPPSKQKEKAASLKRDMPKVLH 640 650 660 670 680 690 >>KIAA1268 ( 1023 res) hj07379 (1023 aa) initn: 51 init1: 51 opt: 65 Z-score: 90.5 bits: 24.8 E(): 7.7 Smith-Waterman score: 65; 22.368% identity (55.263% similar) in 76 aa overlap (4-78:43-118) 10 20 30 FLJ003 PSLITFQRAHRPWEKYSMVLTLVRDLKILQFKG .. : . : .: . .: ..:. KIAA12 KIERLVEVKPSLVIDYLKTEKKLFWPKIKKVNVQVSFNPENKQKGILLTGSKTEVLKAVD 20 30 40 50 60 70 40 50 60 70 80 FLJ003 VEKG-FAKVQVKSTRSKKRAVRACSQKEAYLKFTRLKGHLGCVGQLVLWTELCVSPQ . : . .: :::... : ... : .: . ...: .:: .: KIAA12 IVKQVWDSVCVKSVHTDKPGAKQFFQDKARFYQSEIKRLFGCYIELQENEVMKEGGSPAG 80 90 100 110 120 130 KIAA12 QKCFSRTVLAPGVVLIVQQGDLARLPVDVVVNASNEDLKHYGGLAAALSKAAGPELQADC 140 150 160 170 180 190 89 residues in 1 query sequences 2210905 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:51:48 2009 done: Fri Feb 27 10:51:48 2009 Total Scan time: 0.280 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]