# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj01378.fasta.nr -Q ../query/FLJ00325.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 FLJ00325, 89 aa
 vs /cdna2/lib/nr/nr library

2693465022 residues in 7827732 sequences
 statistics sampled from 60000 to 7827590 sequences
  Expectation_n fit: rho(ln(x))= 4.1628+/-0.000179; mu= 7.7731+/- 0.010
 mean_var=49.9119+/- 9.737, 0's: 37 Z-trim: 38  B-trim: 729 in 1/64
 Lambda= 0.181540

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 36, opt: 24, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(7827732)
gi|21748522|dbj|BAC03398.1| FLJ00325 protein [Homo (  89)  593 162.2 9.5e-39


>>gi|21748522|dbj|BAC03398.1| FLJ00325 protein [Homo sap  (89 aa)
 initn: 593 init1: 593 opt: 593  Z-score: 851.9  bits: 162.2 E(): 9.5e-39
Smith-Waterman score: 593;  100.000% identity (100.000% similar) in 89 aa overlap (1-89:1-89)

               10        20        30        40        50        60
FLJ003 PSLITFQRAHRPWEKYSMVLTLVRDLKILQFKGVEKGFAKVQVKSTRSKKRAVRACSQKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 PSLITFQRAHRPWEKYSMVLTLVRDLKILQFKGVEKGFAKVQVKSTRSKKRAVRACSQKE
               10        20        30        40        50        60

               70        80         
FLJ003 AYLKFTRLKGHLGCVGQLVLWTELCVSPQ
       :::::::::::::::::::::::::::::
gi|217 AYLKFTRLKGHLGCVGQLVLWTELCVSPQ
               70        80         




89 residues in 1 query   sequences
2693465022 residues in 7827732 library sequences
 Tcomplib [34.26] (2 proc)
 start: Fri Feb 27 15:31:07 2009 done: Fri Feb 27 15:34:44 2009
 Total Scan time: 473.990 Total Display time:  0.000

Function used was FASTA [version 34.26.5 April 26, 2007]