# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj01456.fasta.huge -Q ../query/FLJ00381.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00381, 343 aa vs ./tmplib.10216 library 2210651 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 8.6653+/-0.0069; mu= -0.9540+/- 0.462 mean_var=275.6290+/-62.096, 0's: 0 Z-trim: 2 B-trim: 139 in 1/39 Lambda= 0.077252 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1218 ( 864 res) fh03016 ( 864) 691 89.6 7.8e-19 KIAA0755 ( 1093 res) hk04532 (1093) 166 31.2 0.37 KIAA0181 ( 2079 res) ha02522s1 (2079) 156 30.4 1.2 KIAA0269 ( 567 res) ha06751 ( 567) 143 28.3 1.4 KIAA1086 ( 902 res) hj08218 ( 902) 139 28.1 2.6 FLJ00086 ( 399 res) as00086 ( 399) 128 26.5 3.6 KIAA0473 ( 937 res) hh00220 ( 937) 134 27.6 4 FLJ00252 ( 819 res) sj09394 ( 819) 128 26.8 5.8 KIAA1298 ( 738 res) fg04206 ( 738) 127 26.7 5.8 FLJ00378 ( 855 res) sj00210 ( 855) 128 26.8 6 KIAA1986 ( 334 res) pg00636 ( 334) 117 25.2 7.4 KIAA1768 ( 1207 res) ph00672(revised) (1207) 128 27.0 7.5 KIAA0954 ( 1183 res) hj05543s1 (1183) 127 26.9 8 KIAA1429 ( 1795 res) fh08353 (1795) 126 27.0 11 FLJ00404 ( 261 res) sj07851 ( 261) 109 24.2 12 KIAA1518 ( 876 res) sh00483 ( 876) 119 25.9 12 KIAA0886 ( 1233 res) hk07722 (1233) 120 26.1 14 FLJ00315 ( 925 res) sh06842 ( 925) 116 25.5 16 FLJ00230 ( 414 res) sj06557 ( 414) 109 24.4 16 KIAA1139 ( 1124 res) hk00330 (1124) 116 25.6 18 KIAA1886 ( 655 res) fk01837 ( 655) 111 24.8 19 KIAA0303 ( 2137 res) hg00009 (2137) 121 26.5 19 KIAA1372 ( 773 res) fj03335 ( 773) 111 24.9 21 KIAA0288 ( 1097 res) ha06116(revised) (1097) 114 25.4 21 KIAA0616 ( 634 res) hg03623 ( 634) 109 24.6 21 FLJ00260 ( 922 res) sh05833 ( 922) 112 25.1 22 KIAA0310 ( 2388 res) ee03470 (2388) 120 26.4 22 KIAA1383 ( 907 res) fj06145 ( 907) 111 25.0 23 KIAA0720 ( 1091 res) hk01741s1 (1091) 112 25.2 24 KIAA1602 ( 1003 res) fj10252 (1003) 111 25.0 25 KIAA0852 ( 1017 res) hk06101 (1017) 111 25.0 25 KIAA0622 ( 1289 res) hg04583 (1289) 113 25.4 25 KIAA2025 ( 1109 res) fh08764 (1109) 110 25.0 28 KIAA0346 ( 1682 res) hg01508s1 (1682) 113 25.5 30 KIAA1685 ( 1505 res) pf04287 (1505) 112 25.3 30 KIAA1286 ( 1214 res) hh11961(revised) (1214) 110 25.0 30 KIAA0154 ( 692 res) ha03131 ( 692) 105 24.2 30 KIAA1224 ( 997 res) fh02652 ( 997) 108 24.7 31 KIAA1528 ( 740 res) hh03104(revised) ( 740) 105 24.2 32 FLJ00280 ( 440 res) sh01728 ( 440) 100 23.4 33 KIAA0940 ( 699 res) hh04894 ( 699) 104 24.1 33 FLJ00043 ( 1415 res) as00043 (1415) 110 25.1 33 KIAA0596 ( 1531 res) hg01605 (1531) 110 25.1 35 KIAA1887 ( 967 res) fk02232 ( 967) 106 24.5 35 KIAA1318 ( 1418 res) fh13683 (1418) 109 25.0 36 KIAA1471 ( 1421 res) fj02383s1 (1421) 109 25.0 36 FLJ00132 ( 572 res) sh02007 ( 572) 101 23.6 36 KIAA1172 ( 929 res) hj03919(revised) ( 929) 105 24.3 37 KIAA0239 ( 849 res) ha06313 ( 849) 104 24.2 38 KIAA0316 ( 1379 res) fg06820 (1379) 108 24.8 38 >>KIAA1218 ( 864 res) fh03016 (864 aa) initn: 633 init1: 274 opt: 691 Z-score: 431.5 bits: 89.6 E(): 7.8e-19 Smith-Waterman score: 691; 37.690% identity (63.830% similar) in 329 aa overlap (28-341:87-404) 10 20 30 40 50 FLJ003 VWGGSALRSSRETLGSSAPVTWASVIADMSIFGHCPAHDDFYLVVCNHCSQVVKPQA :: .::: :::::::::::. :.::::::. KIAA12 AKLHCSDNVDLEEAGKEGGKSREVMRLNKEDMHLFGHYPAHDDFYLVVCSACNQVVKPQV 60 70 80 90 100 110 60 70 80 90 100 110 FLJ003 FQKHCERRHGPLSKLYGRAPPPPPAPASSQKCHVVNGQGPACRAPGSTKTSS-------R ::.::::::: . : : : .:::. . .:. . :: . . .:. . KIAA12 FQSHCERRHGSMC----RPSPSPVSPASNPRTSLVQVKTKACLSGHHSASSTSKPFKTPK 120 130 140 150 160 170 120 130 140 150 160 FLJ003 EKGQGSRSRGHQP-PEKTQKDNLCLFVPVVNLEKMSSLPKPDGHGIRVAPPSGFLSQPGG .. : :. : : : ..:. :. ::::.:::. .: : :: .... . . .. KIAA12 DNLLTSSSKQHTVFPAKGSRDKPCVPVPVVSLEKIPNLVKADGANVKMNSTTTTAVSASS 180 190 200 210 220 230 170 180 190 200 210 220 FLJ003 LTKDSPGKPPMAPP---SKE-PPGRENIEIIPSEGSSHWAEGSPPEKEPSGTRLPPKTHR .... . ::. : :: ::. : .:. ..: . .:. .::. : .: KIAA12 TSSSAVSTPPLIKPVLMSKSVPPSPE--KILNGKG---ILPTTIDKKHQNGTKNSNKPYR 240 250 260 270 280 230 240 250 260 270 280 FLJ003 KMARKECDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKANSR .....: : :..:::..::::: ::: :::: ::. .:: : :: :.::.:.:: ::.:: KIAA12 RLSEREFDPNKHCGVLDPETKKPCTRSLTCKTHSLSHRRAVPGRKKQFDLLLAEHKAKSR 290 300 310 320 330 340 290 300 310 320 330 340 FLJ003 KGE-SPKEKSPGRKEQVLHRPSQELPSSVQVVAAVAA--PSSTFSVRANQTYPYCALPRY . : . ::. ...: ::: :.. ..... .. : . :.. : .::: KIAA12 EKEVKDKEHLLTSTREIL--PSQSGPAQDSLLGSSGSSGPEPKVASPAKSRPPNSVLPRP 350 360 370 380 390 400 FLJ003 V KIAA12 SSANSISSSTSSNHSGHTPEPPLPPVGGDLASRLSSDEGEMDGADESEKLDCQFSTHHPR 410 420 430 440 450 460 >>KIAA0755 ( 1093 res) hk04532 (1093 aa) initn: 80 init1: 80 opt: 166 Z-score: 114.0 bits: 31.2 E(): 0.37 Smith-Waterman score: 166; 26.667% identity (47.692% similar) in 195 aa overlap (33-221:81-261) 10 20 30 40 50 60 FLJ003 GGSALRSSRETLGSSAPVTWASVIADMSIFGHCPAHDDFYLVVCNHCSQVVKPQAFQKHC : : : : . :....: ...: KIAA07 CRIILWNDIFIMSQQGYVATPPYSQPQPGIGLSPPHYGHY----GDPSHTASPTGMMKPA 60 70 80 90 100 70 80 90 100 110 FLJ003 ERRHGPL--SKLYGRAPPPPPAPASSQ-KCHVVNGQG-PACRAPGSTKTSSREKGQGSRS ::: . : :: :: :. : . ... : : : :: ... .: KIAA07 ----GPLGATATRGMLPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNV----ASSH 110 120 130 140 150 120 130 140 150 160 170 FLJ003 RGHQPPEKTQKDNLCLFVPVVNLEKMSSLPKPDGHGIRVAPPSGFLSQPGGLTKDSPGKP .:: ... . :..: .. : . ...: .:::: . :: :. : : KIAA07 APYQPSAQSSYPGPISTSSVTQLGSQLSAMQINSYGSGMAPPSQ--GPPGPLSATSLQTP 160 170 180 190 200 210 180 190 200 210 220 230 FLJ003 PMAP-PSKEPPGRENIEIIPSEGSSHWAEGSP-PEKEPSGTRLPPKTHRKMARKECDLNR : : :: :: . . :. .. : : : .:.: :: KIAA07 PRPPQPSILQPGSQVLPPPPTTLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPPLPGQT 220 230 240 250 260 270 240 250 260 270 280 290 FLJ003 QCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKANSRKGESPKEKSPG KIAA07 LGAGYPPQQANSGPQMAGAQLSYPGGFPGGPAQMAGPPQPQKKLDPDSIPSPIQVIENDR 280 290 300 310 320 330 >>KIAA0181 ( 2079 res) ha02522s1 (2079 aa) initn: 204 init1: 87 opt: 156 Z-score: 104.7 bits: 30.4 E(): 1.2 Smith-Waterman score: 164; 26.131% identity (53.769% similar) in 199 aa overlap (36-216:346-534) 10 20 30 40 50 60 FLJ003 ALRSSRETLGSSAPVTWASVIADMSIFGHCPAHDDFYLVVCNHC-SQVVKPQAFQKHCER ::. .. .. :. ... : .:.. . KIAA01 QGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPGPMQQQLQA 320 330 340 350 360 370 70 80 90 100 110 120 FLJ003 RHGPLSKLYGRAPPPPPAPASSQKCHVVNGQGPACRAPGSTKTSSREKGQGSRSRGHQP- : . :. . . :::: : .::. .. . : ::. . . .. ::. :: : KIAA01 RPS-LATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQGGPSRVPTPL 380 390 400 410 420 430 130 140 150 160 170 FLJ003 --PEKTQKD---NLCLF-------VPVVNLEKMSSLPKPDGHGIRVAP-PSGFLSQPGGL :. :.:. . : :.:: ... :.: .. : :.:: .:: KIAA01 QQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQNN----PLPQGF-QQP--- 440 450 460 470 480 180 190 200 210 220 FLJ003 TKDSPGKPPMAPPSKEPPGRENIEIIP-SEG--SSHWAEGSPPEKEPSGTRLPPKTHRKM .:::. ::. .. ::. .. : ..: : : . :. :.. : : KIAA01 -VSSPGRNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGLGGMPKRLPPGFSAGQANPNFM 490 500 510 520 530 540 230 240 250 260 270 280 FLJ003 ARKECDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKANSRKG KIAA01 QGQVPSTTATTPGNSGAPQLQANQNVQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHG 550 560 570 580 590 600 >>KIAA0269 ( 567 res) ha06751 (567 aa) initn: 117 init1: 69 opt: 143 Z-score: 103.6 bits: 28.3 E(): 1.4 Smith-Waterman score: 147; 26.846% identity (46.980% similar) in 149 aa overlap (77-215:361-497) 50 60 70 80 90 100 FLJ003 NHCSQVVKPQAFQKHCERRHGPLSKLYGRAPPPPPAPASSQKCHVVNGQ-GPACRAPGST ::::: ::.. . .: .: ::: KIAA02 TPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVL 340 350 360 370 380 390 110 120 130 140 150 160 FLJ003 KTSSREKGQGSRSRGHQP-PEKTQKDNLCLFVPVVNLEKMSSLPKPDGHGIRVAPPSGFL . . . :: : .. .: ::: ::. . .:. :: : KIAA02 HPAPPPIAPPLV----QPSPPVARAAPVCETVPV------HPLPQGEVQGLPPPPPPPPL 400 410 420 430 440 170 180 190 200 210 FLJ003 SQPGGLTKDSP------GKPP--MAPPSKEPPGRENIEIIPSEGSSHWAEGSPPEKEPSG :: . .:: ..:: . : . :: .. ..: :. .: :...:: KIAA02 PPPG-IRPSSPVTVTALAHPPSGLHPTPSTAPG-PHVPLMPPSPPSQVIPASEPKRHPST 450 460 470 480 490 220 230 240 250 260 270 FLJ003 TRLPPKTHRKMARKECDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDFDVL KIAA02 LPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDS 500 510 520 530 540 550 >>KIAA1086 ( 902 res) hj08218 (902 aa) initn: 207 init1: 76 opt: 139 Z-score: 98.8 bits: 28.1 E(): 2.6 Smith-Waterman score: 139; 23.551% identity (46.014% similar) in 276 aa overlap (83-341:89-352) 60 70 80 90 100 110 FLJ003 VKPQAFQKHCERRHGPLSKLYGRAPPPPPAPASSQKCHVVNGQGPACRAPGSTKTSSREK :.... : . .: .: .. :. KIAA10 SAAARSYEDRPYFQSAALQSGRMTAADSGQPGTQEACGQPSPHGSHSHAQPPQQAPIVES 60 70 80 90 100 110 120 130 140 150 160 FLJ003 GQ--GSRSRGHQPPEKTQKDNLCLFVPVVNLEKMSSLPKPDGHGIRVA--PPSGFLSQPG :: .. : :. : : . : . :.: : :. . .: :: . . KIAA10 GQPASTLSSGYTYPTATGVQ------PESSASIMTSYPPPSYNPTCTAYTAPSYPNYDAS 120 130 140 150 160 170 170 180 190 200 210 220 FLJ003 GLTKDSPGKPPMAPPSKEPPGR-ENIEIIPSE---GSSHWAEGSPPEKEPSGTRLPPKTH . :: :: :: ::: ... :. ::: :...:: :: : KIAA10 VYSAASPFYPPAQPPP--PPGPPQQLPPPPAPAGSGSSPRADSKPPL--PSKLPRPKAGP 180 190 200 210 220 230 240 250 260 270 280 FLJ003 RKMARKECDLNR-QCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDFDV---LVAEL :.. . ::. . .:. .:.: . . . . :. :: .. : : .: KIAA10 RQLQLHYCDICKISCA--GPQTYREHLGGQKHRKKEAAQKTGVQPNGSPRGVQAQLHCDL 230 240 250 260 270 280 290 300 310 320 330 FLJ003 KANSRKG-ESPKEKSPGRKEQVLHRPSQELPSSVQVVAAVAAPSSTFSVRANQTYP---- : : : .. . : :.: . . .: . . .. . : : ...:. : : KIAA10 CAVSCTGADAYAAHIRGSKHQKVFKLHAKLGKPIPTLEPALATESPPGAEAKPTSPTGPS 290 300 310 320 330 340 340 FLJ003 YCALPRYV :: : KIAA10 VCASSRPALAKRPVASKALCEGPPEPQAAGCRPQWGKPAQPKLEGPGAPTQGGSKEAPAG 350 360 370 380 390 400 >>FLJ00086 ( 399 res) as00086 (399 aa) initn: 74 init1: 74 opt: 128 Z-score: 96.4 bits: 26.5 E(): 3.6 Smith-Waterman score: 130; 27.568% identity (49.730% similar) in 185 aa overlap (72-232:150-324) 50 60 70 80 90 FLJ003 YLVVCNHCSQVVKPQAFQKHCERRHGPLSKLYGRAPPPPPAPAS------SQKCHVVNGQ : . .: : ::.: :.. .: FLJ000 AATPGPVGLALPYAIPARGRSAFQEEDFPALVSSVPKPGTAPTSLVSAWNSSSSSKKVAQ 120 130 140 150 160 170 100 110 120 130 140 150 FLJ003 GP-ACRAPGSTKTSSREKGQGSRSRGHQPPEKTQKDNLCLFVPVVNLEKMSSLPKPDGHG : . .: :: . . :. :.:::. . : ::... :... : .:. .: : FLJ000 PPLSAQATGSGQPT-RKAGKGSRGGRKGGPPFTQEEEEEDGGPALQ-ELLST--RPTGS- 180 190 200 210 220 230 160 170 180 190 200 FLJ003 IRVAPPSGFLS-QPGGLTK------DSPGKP-PMAPPSKEPPGRENIEIIPS---EG--- :. :. : ::. . : ..:: :. ::. ::: . :. :: FLJ000 --VSSTLGLASIQPSKVGKKKKVGSEKPGTTLPQPPPTTCPPGALQAPEAPASRAEGPVA 240 250 260 270 280 290 210 220 230 240 250 FLJ003 ---SSHWAEGSPPEKEPSGTRLPPKTHRKMARKECDLNRQCGVINPETKKICTRLLTCKI ..: .:: : . :. . :: : .. : FLJ000 VVVNGH-TEGPAPAR--SAPKEPPGLPRPLGSFPCPTPQEDFPALGGPCPPRMPPPPGFS 300 310 320 330 340 260 270 280 290 300 310 FLJ003 HSVHQRREVQGRAKDFDVLVAELKANSRKGESPKEKSPGRKEQVLHRPSQELPSSVQVVA FLJ000 AVVLLKGTPPPPPPGLVPPISKPPPGFSGLLPSPHPACVPSPATTTTTKA 350 360 370 380 390 >>KIAA0473 ( 937 res) hh00220 (937 aa) initn: 110 init1: 78 opt: 134 Z-score: 95.6 bits: 27.6 E(): 4 Smith-Waterman score: 134; 26.630% identity (48.913% similar) in 184 aa overlap (55-219:378-547) 30 40 50 60 70 FLJ003 VIADMSIFGHCPAHDDFYLVVCNHCSQVVKPQAFQKHCERRHGPLSKLYGRAPP------ :: :: . . : .:. .:: KIAA04 QFHTGFIPLDTTVLKFTKPELDACDVPEKYPQLFQVTLDVELQPHDKVIDLTPPWEHYCT 350 360 370 380 390 400 80 90 100 110 120 130 FLJ003 ---PPPAPASSQKCH----VVNGQGPACRAPGSTKTSSREKGQ-GSRSRGHQPPEKTQKD : ::.. : ...::.: : . :. :: : . .:..: KIAA04 KDVNPSILFSSHQEHQDTLALGGQAPIDIPPDNP----RHYGQSGFFASLCWQDQKSEK- 410 420 430 440 450 460 140 150 160 170 180 FLJ003 NLCL--FVPVVNLEKMSSLPKPDGHGIRVAPPSGFLS--QPGGLTKDSPGKP-PMAPPSK ..: . .:: :. .: : . . .. : : . .: :. : : . : ::: KIAA04 SFCEEDHAALVNQESEQS----DDELLTLSSPHGNANGDKPHGVKKPSKKQQEPAAPP-- 470 480 490 500 510 190 200 210 220 230 240 FLJ003 EPPGRENIEIIPSEGSSHWAEGSPPEKEPSGTRLPPKTHRKMARKECDLNRQCGVINPET :: :..... :::. ::: :....: KIAA04 -PP--EDVDLLGLEGSAMSNSFSPPAAPPTNSELLSDLFGGGGAAGPTQAGQSGVEDVFH 520 530 540 550 560 570 250 260 270 280 290 300 FLJ003 KKICTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKANSRKGESPKEKSPGRKEQVLHRP KIAA04 PSGPASTQSTPRRSATSTSASPTLRVGEGATFDPFGAPSKPSGQDLLGSFLNTSSASSDP 580 590 600 610 620 630 >>FLJ00252 ( 819 res) sj09394 (819 aa) initn: 135 init1: 91 opt: 128 Z-score: 92.7 bits: 26.8 E(): 5.8 Smith-Waterman score: 128; 25.463% identity (44.907% similar) in 216 aa overlap (33-228:58-258) 10 20 30 40 50 60 FLJ003 GGSALRSSRETLGSSAPVTWASVIADMSIFGHCPAHDDFYLVVCNHCSQVVKPQAFQKHC : :...: ::. : : :. : FLJ002 YQEEETISLQNAFSVVELKPSVAPAPEPSPGFLPVNSDTGLVA------VPGPVPGQHPC 30 40 50 60 70 80 70 80 90 100 110 FLJ003 ERRHGPLSKLYGRAPPPPPAPASSQKCHVVNGQGPACRAPGSTKTSSREKGQGSRS---R .. : . . .:. :. : :: : . .....:.: .. . FLJ002 GEEATQLPAAFTSEATHFKPIVLAQNASVARDQ-PALAQEESEERGGQREGEGEEKLSLE 90 100 110 120 130 140 120 130 140 150 160 FLJ003 GH--QPPEKTQKDNLCLFVPVVNLEKMSSLPKPDGHGIR--------VAPPSGFLSQPGG .: .: :: :: . ... :.: : ... ::.. .:: : FLJ002 AHAGSPSLKTPDG------PVPGPGPQGAAPEPLGASVQRDSAQGRPCPPPQAPANQPEG 150 160 170 180 190 170 180 190 200 210 220 FLJ003 LTKDSPGKPPMAPPSKE---PPGRENIEIIP----SEGSSHWAEGSPPEKEPSGTRLPPK .. .::.: :::.: : . : :: : : : : : : : ::: FLJ002 ASSAAPGSPVPAPPTKASALPVEQGPAEPIPPGVASGGLRPDALG--PTTAHHGPRHPPK 200 210 220 230 240 250 230 240 250 260 270 280 FLJ003 THRKMARKECDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKA :. : FLJ002 PPRSKATERPGQEPEGPGATPAGERDDQSPDSVPERPRPADRRLCLPCVDASPLPGRTAC 260 270 280 290 300 310 >>KIAA1298 ( 738 res) fg04206 (738 aa) initn: 112 init1: 51 opt: 127 Z-score: 92.6 bits: 26.7 E(): 5.8 Smith-Waterman score: 127; 24.519% identity (50.481% similar) in 208 aa overlap (137-335:379-576) 110 120 130 140 150 160 FLJ003 TSSREKGQGSRSRGHQPPEKTQKDNLCLFVPVVNLEKMSSLPKPDGHGIRVAPPSGFLSQ ::..: . : .:. . : :: :: KIAA12 APEASRERCEDPNAPAICTQPAFLPHITSSPVAHLASRSRVPEKPASGPTEPPP--FLPP 350 360 370 380 390 400 170 180 190 200 210 FLJ003 PGGLTKDS--PGK-PPMAPP-SKEPPGRENIEIIPSE---GSSHWAEGSPPEKEPS-GTR :. :. :: . :: : :.::. ...:. .:: . .:: : . KIAA12 AGSRRADTSGPGAGAALEPPASLLEPSRETPKVLPKSLLLKNSH-CDKNPPSTEVVIKEE 410 420 430 440 450 460 220 230 240 250 260 270 FLJ003 LPPKTHRKMARKECDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDFDVLVA :: : :. :: . : : . : . .:. : ... : .. . KIAA12 SSPKKDMKPAK---DLRLLFS--NESEKPTTNSYLMQHQESIIQLQKA-GLVRKHTKELE 470 480 490 500 510 280 290 300 310 320 330 FLJ003 ELKANSRKGESPKEKSPG-RKEQVLHRPSQELPSSVQVVAAVAAPSSTFSVRANQTYPYC .::. :.. .:. : : . . ::. :.... .. .. ::.. : . ... : KIAA12 RLKSVPADPAPPSRDGPASRLEASIPEESQD-PAALHELGPLVMPSQAGSDEKSEAAPAS 520 530 540 550 560 570 340 FLJ003 ALPRYV KIAA12 LEGGSLKSPPPFFYRLDHTSSFSKDFLKTICYTPTSSSMSSNLTRSSSSDSIHSVRGKPG 580 590 600 610 620 630 >>FLJ00378 ( 855 res) sj00210 (855 aa) initn: 108 init1: 91 opt: 128 Z-score: 92.4 bits: 26.8 E(): 6 Smith-Waterman score: 128; 25.463% identity (44.907% similar) in 216 aa overlap (33-228:295-495) 10 20 30 40 50 60 FLJ003 GGSALRSSRETLGSSAPVTWASVIADMSIFGHCPAHDDFYLVVCNHCSQVVKPQAFQKHC : :...: ::. : : :. : FLJ003 YQEEETISLQNAFSVVELKPSVAPAPEPSPGFLPVNSDTGLVA------VPGPVPGQHPC 270 280 290 300 310 70 80 90 100 110 FLJ003 ERRHGPLSKLYGRAPPPPPAPASSQKCHVVNGQGPACRAPGSTKTSSREKGQGSRS---R .. : . . .:. :. : :: : . .....:.: .. . FLJ003 GEEATQLPAAFTSEATHFKPIVLAQNASVARDQ-PALAQEESEERGGQREGEGEEKLSLE 320 330 340 350 360 370 120 130 140 150 160 FLJ003 GH--QPPEKTQKDNLCLFVPVVNLEKMSSLPKPDGHGIR--------VAPPSGFLSQPGG .: .: :: :: . ... :.: : ... ::.. .:: : FLJ003 AHAGSPSLKTPDG------PVPGPGPQGAAPEPLGASVQRDSAQGRPCPPPQAPANQPEG 380 390 400 410 420 430 170 180 190 200 210 220 FLJ003 LTKDSPGKPPMAPPSKE---PPGRENIEIIP----SEGSSHWAEGSPPEKEPSGTRLPPK .. .::.: :::.: : . : :: : : : : : : : ::: FLJ003 ASSAAPGSPVPAPPTKASALPVEQGPAEPIPPGVASGGLRPDALG--PTTAHHGPRHPPK 440 450 460 470 480 230 240 250 260 270 280 FLJ003 THRKMARKECDLNRQCGVINPETKKICTRLLTCKIHSVHQRREVQGRAKDFDVLVAELKA :. : FLJ003 PPRSKATERPGQEPEGPGATPAGERDDQSPDSVPERPRPADRRLCLPCVDASPLPGRTAC 490 500 510 520 530 540 343 residues in 1 query sequences 2210651 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 11:02:31 2009 done: Fri Feb 27 11:02:32 2009 Total Scan time: 0.480 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]