# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj01466.fasta.nr -Q ../query/FLJ00180.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00180, 499 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7823148 sequences Expectation_n fit: rho(ln(x))= 5.8639+/-0.000184; mu= 6.8670+/- 0.010 mean_var=81.5039+/-16.303, 0's: 36 Z-trim: 54 B-trim: 2905 in 1/64 Lambda= 0.142064 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676566|dbj|BAB84935.1| FLJ00180 protein [Homo ( 499) 3100 645.2 1.1e-182 gi|158563940|sp|Q7RTR2.2|NLRC3_HUMAN RecName: Full (1065) 3100 645.4 2.1e-182 gi|119605757|gb|EAW85351.1| NOD3 protein, isoform (1112) 3100 645.4 2.2e-182 gi|30348948|tpg|DAA01245.1| TPA: TPA_inf: NOD3 [Ho (1112) 3100 645.4 2.2e-182 gi|194219286|ref|XP_001499317.2| PREDICTED: NLR fa (1063) 2871 598.5 2.8e-168 gi|114660643|ref|XP_001167492.1| PREDICTED: NOD3 p (1104) 2869 598.1 3.9e-168 gi|194678537|ref|XP_584462.3| PREDICTED: similar t (1065) 2741 571.9 3e-160 gi|73959310|ref|XP_547153.2| PREDICTED: similar to (1151) 2733 570.2 9.9e-160 gi|109487787|ref|XP_220212.4| PREDICTED: similar t (1061) 2530 528.6 3.1e-147 gi|158563868|sp|Q5DU56.2|NLRC3_MOUSE RecName: Full (1064) 2494 521.2 5.2e-145 gi|60360292|dbj|BAD90390.1| mFLJ00348 protein [Mus (1089) 2494 521.2 5.3e-145 gi|182887927|gb|AAI60196.1| NLR family, CARD domai (1102) 2494 521.2 5.3e-145 gi|126335269|ref|XP_001370217.1| PREDICTED: simila (1093) 2419 505.9 2.2e-140 gi|164562267|gb|ABY61045.1| nucleotide-binding oli ( 377) 2045 429.0 1.1e-117 gi|26350999|dbj|BAC39136.1| unnamed protein produc ( 397) 1964 412.4 1.1e-112 gi|218675766|gb|AAI69297.2| NOD3 protein [syntheti ( 311) 1930 405.3 1.2e-110 gi|183985790|gb|AAI66378.1| LOC100158644 protein [ ( 566) 1809 380.7 5.6e-103 gi|26348215|dbj|BAC37747.1| unnamed protein produc ( 312) 1512 319.7 7.2e-85 gi|59891397|tpg|DAA05659.1| TPA: TPA_inf: caterpil (1205) 1495 316.5 2.5e-83 gi|189536963|ref|XP_001920433.1| PREDICTED: NLR fa (1167) 1413 299.7 2.8e-78 gi|20467211|gb|AAM22459.1| CARD15-like protein [Ho ( 223) 1375 291.5 1.5e-76 gi|218675679|gb|AAI69296.2| NOD3 protein [syntheti ( 318) 1175 250.6 4.5e-64 gi|20467213|gb|AAM22460.1| CARD15-like protein [Ho ( 195) 1094 233.9 3e-59 gi|156222351|gb|EDO43196.1| predicted protein [Nem ( 398) 1033 221.5 3.2e-55 gi|119605754|gb|EAW85348.1| NOD3 protein, isoform ( 761) 1021 219.2 3e-54 gi|21748550|dbj|BAC03412.1| FLJ00348 protein [Homo ( 778) 1021 219.3 3e-54 gi|120577638|gb|AAI30224.1| Nlrc3 protein [Mus mus ( 239) 1000 214.7 2.2e-53 gi|119605755|gb|EAW85349.1| NOD3 protein, isoform ( 717) 1006 216.2 2.4e-53 gi|149042678|gb|EDL96315.1| rCG49763 [Rattus norve ( 185) 932 200.7 2.8e-49 gi|46400730|emb|CAF24179.1| conserved hypothetical (1866) 944 203.7 3.5e-49 gi|183178960|gb|ACC43968.1| FBox-LRR protein [Phil ( 594) 887 191.7 4.5e-46 gi|46400616|emb|CAF24065.1| conserved hypothetical (1764) 854 185.2 1.2e-43 gi|149042677|gb|EDL96314.1| rCG64289 [Rattus norve ( 724) 840 182.1 4.2e-43 gi|46399539|emb|CAF22988.1| hypothetical protein [ (1805) 806 175.4 1.1e-40 gi|148664799|gb|EDK97215.1| mCG126183 [Mus musculu ( 160) 784 170.3 3.4e-40 gi|188501476|gb|ACD54608.1| leucine rich repeat co (1420) 777 169.4 5.7e-39 gi|47225983|emb|CAG04357.1| unnamed protein produc ( 826) 749 163.5 1.9e-37 gi|113595289|dbj|BAF19163.1| Os06g0237400 [Oryza s ( 748) 716 156.7 1.9e-35 gi|222635277|gb|EEE65409.1| hypothetical protein O ( 873) 716 156.8 2.2e-35 gi|116056431|emb|CAL52720.1| unnamed protein produ ( 517) 668 146.8 1.3e-32 gi|156208407|gb|EDO29917.1| predicted protein [Nem ( 408) 655 144.1 6.8e-32 gi|156214577|gb|EDO35561.1| predicted protein [Nem ( 294) 632 139.3 1.3e-30 gi|60469707|gb|EAL67695.1| hypothetical protein DD ( 617) 630 139.1 3.3e-30 gi|156219175|gb|EDO40061.1| predicted protein [Nem ( 366) 602 133.2 1.1e-28 gi|14993576|gb|AAK76360.1|AF272150_1 deliriumA [Di ( 817) 602 133.4 2.2e-28 gi|60463940|gb|EAL62103.1| hypothetical protein DD ( 818) 602 133.4 2.2e-28 gi|158279387|gb|EDP05148.1| predicted protein [Chl ( 364) 559 124.4 5.1e-26 gi|115781723|ref|XP_001197865.1| PREDICTED: simila ( 712) 559 124.5 9e-26 gi|144577078|gb|ABO95145.1| predicted protein [Ost ( 471) 556 123.8 9.8e-26 gi|156210028|gb|EDO31240.1| predicted protein [Nem ( 389) 546 121.7 3.4e-25 >>gi|18676566|dbj|BAB84935.1| FLJ00180 protein [Homo sap (499 aa) initn: 3100 init1: 3100 opt: 3100 Z-score: 3435.8 bits: 645.2 E(): 1.1e-182 Smith-Waterman score: 3100; 100.000% identity (100.000% similar) in 499 aa overlap (1-499:1-499) 10 20 30 40 50 60 FLJ001 VLHCLHELQHTELARSVEEAMESGALARLTGPAHRAALAYLLQVSDACAQEANLSLSLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 VLHCLHELQHTELARSVEEAMESGALARLTGPAHRAALAYLLQVSDACAQEANLSLSLSQ 10 20 30 40 50 60 70 80 90 100 110 120 FLJ001 GVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GVLQSLLPQLLYCRKLRLDTNQFQDPVMELLGSVLSGKDCRIQKISLAENQISNKGAKAL 70 80 90 100 110 120 130 140 150 160 170 180 FLJ001 ARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 ARSLLVNRSLTSLDLRGNSIGPQGAKALADALKINRTLTSLSLQGNTVRDDGARSMAEAL 130 140 150 160 170 180 190 200 210 220 230 240 FLJ001 ASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 ASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQ 190 200 210 220 230 240 250 260 270 280 290 300 FLJ001 GLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTLKN 250 260 270 280 290 300 310 320 330 340 350 360 FLJ001 LDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLNRSLTSLDLQ 310 320 330 340 350 360 370 380 390 400 410 420 FLJ001 ENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 ENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAI 370 380 390 400 410 420 430 440 450 460 470 480 FLJ001 GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATALSGNHRLQHINLQGNHIGDSG 430 440 450 460 470 480 490 FLJ001 ARMISEAIKTNAPTCTVEM ::::::::::::::::::: gi|186 ARMISEAIKTNAPTCTVEM 490 >>gi|158563940|sp|Q7RTR2.2|NLRC3_HUMAN RecName: Full=Pro (1065 aa) initn: 3100 init1: 3100 opt: 3100 Z-score: 3430.9 bits: 645.4 E(): 2.1e-182 Smith-Waterman score: 3100; 100.000% identity (100.000% similar) in 499 aa overlap (1-499:567-1065) 10 20 30 FLJ001 VLHCLHELQHTELARSVEEAMESGALARLT :::::::::::::::::::::::::::::: gi|158 GEHQAYRTQVAELLQGCLRPDAAVCARAINVLHCLHELQHTELARSVEEAMESGALARLT 540 550 560 570 580 590 40 50 60 70 80 90 FLJ001 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL 600 610 620 630 640 650 100 110 120 130 140 150 FLJ001 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD 660 670 680 690 700 710 160 170 180 190 200 210 FLJ001 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ 720 730 740 750 760 770 220 230 240 250 260 270 FLJ001 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL 780 790 800 810 820 830 280 290 300 310 320 330 FLJ001 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH 840 850 860 870 880 890 340 350 360 370 380 390 FLJ001 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA 900 910 920 930 940 950 400 410 420 430 440 450 FLJ001 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM 960 970 980 990 1000 1010 460 470 480 490 FLJ001 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM ::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1020 1030 1040 1050 1060 >>gi|119605757|gb|EAW85351.1| NOD3 protein, isoform CRA_ (1112 aa) initn: 3100 init1: 3100 opt: 3100 Z-score: 3430.6 bits: 645.4 E(): 2.2e-182 Smith-Waterman score: 3100; 100.000% identity (100.000% similar) in 499 aa overlap (1-499:614-1112) 10 20 30 FLJ001 VLHCLHELQHTELARSVEEAMESGALARLT :::::::::::::::::::::::::::::: gi|119 GEHQAYRTQVAELLQGCLRPDAAVCARAINVLHCLHELQHTELARSVEEAMESGALARLT 590 600 610 620 630 640 40 50 60 70 80 90 FLJ001 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL 650 660 670 680 690 700 100 110 120 130 140 150 FLJ001 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD 710 720 730 740 750 760 160 170 180 190 200 210 FLJ001 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ 770 780 790 800 810 820 220 230 240 250 260 270 FLJ001 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL 830 840 850 860 870 880 280 290 300 310 320 330 FLJ001 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH 890 900 910 920 930 940 340 350 360 370 380 390 FLJ001 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA 950 960 970 980 990 1000 400 410 420 430 440 450 FLJ001 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM 1010 1020 1030 1040 1050 1060 460 470 480 490 FLJ001 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM ::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1070 1080 1090 1100 1110 >>gi|30348948|tpg|DAA01245.1| TPA: TPA_inf: NOD3 [Homo s (1112 aa) initn: 3100 init1: 3100 opt: 3100 Z-score: 3430.6 bits: 645.4 E(): 2.2e-182 Smith-Waterman score: 3100; 100.000% identity (100.000% similar) in 499 aa overlap (1-499:614-1112) 10 20 30 FLJ001 VLHCLHELQHTELARSVEEAMESGALARLT :::::::::::::::::::::::::::::: gi|303 GEHQAYRTQVAELLQGCLRPDAAVCARAINVLHCLHELQHTELARSVEEAMESGALARLT 590 600 610 620 630 640 40 50 60 70 80 90 FLJ001 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL 650 660 670 680 690 700 100 110 120 130 140 150 FLJ001 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD 710 720 730 740 750 760 160 170 180 190 200 210 FLJ001 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ 770 780 790 800 810 820 220 230 240 250 260 270 FLJ001 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL 830 840 850 860 870 880 280 290 300 310 320 330 FLJ001 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH 890 900 910 920 930 940 340 350 360 370 380 390 FLJ001 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA 950 960 970 980 990 1000 400 410 420 430 440 450 FLJ001 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM 1010 1020 1030 1040 1050 1060 460 470 480 490 FLJ001 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM ::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1070 1080 1090 1100 1110 >>gi|194219286|ref|XP_001499317.2| PREDICTED: NLR family (1063 aa) initn: 2871 init1: 2871 opt: 2871 Z-score: 3177.3 bits: 598.5 E(): 2.8e-168 Smith-Waterman score: 2871; 91.182% identity (98.597% similar) in 499 aa overlap (1-499:565-1063) 10 20 30 FLJ001 VLHCLHELQHTELARSVEEAMESGALARLT :::::::::::::::.::::.:::.::::: gi|194 GEHQGYRAQVAELLQGCLRHDTAVCARAINVLHCLHELQHTELARGVEEALESGGLARLT 540 550 560 570 580 590 40 50 60 70 80 90 FLJ001 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL :: ::.::::::::::.::::.:::: :::::::::::::::::.::::::::::::::: gi|194 GPHHRTALAYLLQVSDTCAQEVNLSLHLSQGVLQSLLPQLLYCRSLRLDTNQFQDPVMEL 600 610 620 630 640 650 100 110 120 130 140 150 FLJ001 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD :::::::::::::.:::::::::::::::::::::::::::.::::.::::::::::::: gi|194 LGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALAD 660 670 680 690 700 710 160 170 180 190 200 210 FLJ001 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ ::::::::.:::::.::.:::::::.::::..:::::.::::::.:::.:.::::::::: gi|194 ALKINRTLASLSLQSNTIRDDGARSIAEALGTNRTLSVLHLQKNTIGPVGTQRMADALKQ 720 730 740 750 760 770 220 230 240 250 260 270 FLJ001 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL :.:::::::::::.:::::::::::::::::::.:::::::::::::::::::::::::: gi|194 NKSLKELMFSSNSMGDGGAKALAEALKVNQGLENLDLQSNSISDAGVAALMGALCTNQTL 780 790 800 810 820 830 280 290 300 310 320 330 FLJ001 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH :::.:::::::::::: .:::::.::::::::::::::::.::.::::::::::.::::: gi|194 LSLNLRENSISPEGAQDLAHALCTNSTLKNLDLTANLLHDEGAQAIAVAVRENRALTSLH 840 850 860 870 880 890 340 350 360 370 380 390 FLJ001 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA :::::::::::.::::::::::::::::::::::::.:: ::: :::.:::::::::::: gi|194 LQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGDEGASAVASALKANTALTALYLQVA 900 910 920 930 940 950 400 410 420 430 440 450 FLJ001 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM :::: :::.:::::::::::::::::::.::::::::::::::::::::::::::::::: gi|194 SIGAPGAQALGEALAVNRTLEILDLRGNTIGVAGAKALANALKVNSSLRRLNLQENSLGM 960 970 980 990 1000 1010 460 470 480 490 FLJ001 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM :::::.:::::::: ::::::::::::.:::::::::::::::.::::: gi|194 DGAICVATALSGNHGLQHINLQGNHIGESGARMISEAIKTNAPSCTVEM 1020 1030 1040 1050 1060 >>gi|114660643|ref|XP_001167492.1| PREDICTED: NOD3 prote (1104 aa) initn: 3059 init1: 1543 opt: 2869 Z-score: 3174.8 bits: 598.1 E(): 3.9e-168 Smith-Waterman score: 2869; 93.788% identity (96.794% similar) in 499 aa overlap (1-499:614-1104) 10 20 30 FLJ001 VLHCLHELQHTELARSVEEAMESGALARLT :::::.:::::::::::::::::::::::: gi|114 GEHQAYRTQVAELLQGCLRPDAAVCARAINVLHCLRELQHTELARSVEEAMESGALARLT 590 600 610 620 630 640 40 50 60 70 80 90 FLJ001 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL 650 660 670 680 690 700 100 110 120 130 140 150 FLJ001 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|114 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGSKALAD 710 720 730 740 750 760 160 170 180 190 200 210 FLJ001 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ 770 780 790 800 810 820 220 230 240 250 260 270 FLJ001 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL :::::::: . .. :. ... . ... .:::::::::::::::::::::::: gi|114 NRSLKELMAAPSGSWDSHTQGASSSFR--------SLQSNSISDAGVAALMGALCTNQTL 830 840 850 860 870 280 290 300 310 320 330 FLJ001 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|114 LSLSLRENSISPEGAQAIAHALRANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH 880 890 900 910 920 930 340 350 360 370 380 390 FLJ001 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA 940 950 960 970 980 990 400 410 420 430 440 450 FLJ001 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|114 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALAHALKVNSSLRRLNLQENSLGM 1000 1010 1020 1030 1040 1050 460 470 480 490 FLJ001 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM ::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM 1060 1070 1080 1090 1100 >>gi|194678537|ref|XP_584462.3| PREDICTED: similar to NO (1065 aa) initn: 2741 init1: 2741 opt: 2741 Z-score: 3033.2 bits: 571.9 E(): 3e-160 Smith-Waterman score: 2741; 88.577% identity (95.992% similar) in 499 aa overlap (1-499:567-1065) 10 20 30 FLJ001 VLHCLHELQHTELARSVEEAMESGALARLT :::::.::::::::::::::. ::.::::: gi|194 GEHQGYQAQVAELLQGCLRPDVAVCARAINVLHCLRELQHTELARSVEEAVASGGLARLT 540 550 560 570 580 590 40 50 60 70 80 90 FLJ001 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL .: :::::::::::::.:: :: : : :: ::::::::::::::.::::::::::::::: gi|194 SPPHRAALAYLLQVSDVCAWEAPLPLCLSPGVLQSLLPQLLYCRSLRLDTNQFQDPVMEL 600 610 620 630 640 650 100 110 120 130 140 150 FLJ001 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD :::::::::::::.:::::::::::::::::::::::::::.::::.::::::::::::: gi|194 LGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTTLDLRSNSIGPQGAKALAD 660 670 680 690 700 710 160 170 180 190 200 210 FLJ001 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ ::::::::.:::::.: .:::::: ::::::.:::::.::::::::::.:.:.::::::: gi|194 ALKINRTLASLSLQSNRIRDDGARCMAEALATNRTLSVLHLQKNSIGPVGTQQMADALKQ 720 730 740 750 760 770 220 230 240 250 260 270 FLJ001 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL :::::::::::::::::::::::::: :::::.::::::::::: ::::::::::::::: gi|194 NRSLKELMFSSNSIGDGGAKALAEALMVNQGLKSLDLQSNSISDPGVAALMGALCTNQTL 780 790 800 810 820 830 280 290 300 310 320 330 FLJ001 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH :::.:::::::::::: .:.:: .:::::.:::::::::::::.:.: :::::::::::: gi|194 LSLNLRENSISPEGAQDLARALRTNSTLKSLDLTANLLHDQGAQAVAEAVRENRTLTSLH 840 850 860 870 880 890 340 350 360 370 380 390 FLJ001 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA :::::::::::.::::::::: ::::::::::::::.:: ::: ::::::.::::::::: gi|194 LQWNFIQAGAAKALGQALQLNTSLTSLDLQENAIGDEGASAVASALKVNTVLTALYLQVA 900 910 920 930 940 950 400 410 420 430 440 450 FLJ001 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM :::: :::.:::::::::::::::::::.: ::::::::.::::::::.::::::::::: gi|194 SIGAPGAQALGEALAVNRTLEILDLRGNTIEVAGAKALASALKVNSSLQRLNLQENSLGM 960 970 980 990 1000 1010 460 470 480 490 FLJ001 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM .::::.:::::::: :.::::::::::.:::::::::::::::.::::: gi|194 EGAICVATALSGNHGLRHINLQGNHIGESGARMISEAIKTNAPSCTVEM 1020 1030 1040 1050 1060 >>gi|73959310|ref|XP_547153.2| PREDICTED: similar to NOD (1151 aa) initn: 2733 init1: 2733 opt: 2733 Z-score: 3023.9 bits: 570.2 E(): 9.9e-160 Smith-Waterman score: 2733; 87.375% identity (96.994% similar) in 499 aa overlap (1-499:653-1151) 10 20 30 FLJ001 VLHCLHELQHTELARSVEEAMESGALARLT .:::::::: ::::::::::::::.:: :: gi|739 GEHQGYRAQVAELLQGCLRPNVAVCARAVNILHCLHELQCTELARSVEEAMESGGLAGLT 630 640 650 660 670 680 40 50 60 70 80 90 FLJ001 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL :: ::::::::::::::::::::::: ::..:::::::::::::.::::.:::::::::: gi|739 GPQHRAALAYLLQVSDACAQEANLSLCLSRSVLQSLLPQLLYCRSLRLDNNQFQDPVMEL 690 700 710 720 730 740 100 110 120 130 140 150 FLJ001 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD :::::::::::::.:::::::::::::::::::::::::::.::::.::::::::::::: gi|739 LGSVLSGKDCRIQRISLAENQISNKGAKALARSLLVNRSLTALDLRSNSIGPQGAKALAD 750 760 770 780 790 800 160 170 180 190 200 210 FLJ001 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ ::::::::. ::::.: .::.::::::::::.:::::.::::::..::.::: ::..::: gi|739 ALKINRTLAFLSLQSNEIRDNGARSMAEALATNRTLSVLHLQKNTVGPVGAQLMAETLKQ 810 820 830 840 850 860 220 230 240 250 260 270 FLJ001 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL :::::::.:::::::::::.:::.::.::::::.::::::::::.::::::::::.::.: gi|739 NRSLKELIFSSNSIGDGGAEALAKALRVNQGLENLDLQSNSISDTGVAALMGALCANQAL 870 880 890 900 910 920 280 290 300 310 320 330 FLJ001 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH ::.:::::::::::. .:.:: .:::::::::::::::::::.:::::.:::..::::: gi|739 TSLNLRENSISPEGARELARALRSNSTLKNLDLTANLLHDQGAQAIAVAMRENQALTSLH 930 940 950 960 970 980 340 350 360 370 380 390 FLJ001 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA :::::::::::.::::::::::::::::::::::::.:: ::: :::.:..:::::::.: gi|739 LQWNFIQAGAAKALGQALQLNRSLTSLDLQENAIGDEGASAVASALKTNATLTALYLQAA 990 1000 1010 1020 1030 1040 400 410 420 430 440 450 FLJ001 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM :::: :::.::.::::: :::::::::::::::::::::::::::::::::::::::::: gi|739 SIGARGAQALGDALAVNGTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM 1050 1060 1070 1080 1090 1100 460 470 480 490 FLJ001 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM :::::.:::::::: ::::::::::::.:::::::::::::::.::::: gi|739 DGAICVATALSGNHGLQHINLQGNHIGESGARMISEAIKTNAPSCTVEM 1110 1120 1130 1140 1150 >>gi|109487787|ref|XP_220212.4| PREDICTED: similar to NO (1061 aa) initn: 2530 init1: 2530 opt: 2530 Z-score: 2799.5 bits: 528.6 E(): 3.1e-147 Smith-Waterman score: 2530; 81.162% identity (94.188% similar) in 499 aa overlap (1-499:563-1061) 10 20 30 FLJ001 VLHCLHELQHTELARSVEEAMESGALARLT .:.:: ::.::.:::::::::.::.:: .: gi|109 GEHQSYRNQVAEVLQGFLHPDTAVCARAINILYCLSELRHTDLARSVEEAMRSGTLAGMT 540 550 560 570 580 590 40 50 60 70 80 90 FLJ001 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL .: ::.:::::::.:: :. ::..:: ::: ::::::::::::..::::.:::::::::: gi|109 SPPHRTALAYLLQMSDICSWEADFSLCLSQRVLQSLLPQLLYCQSLRLDNNQFQDPVMEL 600 610 620 630 640 650 100 110 120 130 140 150 FLJ001 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD ::::::::::::::::::::::.::::..:::::::::::..::::.::::::::::::: gi|109 LGSVLSGKDCRIQKISLAENQIGNKGARGLARSLLVNRSLVTLDLRSNSIGPQGAKALAD 660 670 680 690 700 710 160 170 180 190 200 210 FLJ001 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ ::::::::::::::.:...:::. :::::.::. .: :.:::: ::: :::.::::::. gi|109 ALKINRTLTSLSLQSNVIKDDGVMYMAEALVSNQIISTLQLQKNLIGPRGAQQMADALKK 720 730 740 750 760 770 220 230 240 250 260 270 FLJ001 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL ::::.:::::::.::: :: :::::::::::::.::::::.::..:::.:: :::::::: gi|109 NRSLRELMFSSNTIGDRGAMALAEALKVNQGLENLDLQSNAISNTGVAVLMRALCTNQTL 780 790 800 810 820 830 280 290 300 310 320 330 FLJ001 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH ::.:::::::::::::.:.::: :.:::.:::::::::::::.:::.:: :: .:: :: gi|109 SSLNLRENSISPEGAQALAQALCRNTTLKHLDLTANLLHDQGAQAIATAVGENCSLTHLH 840 850 860 870 880 890 340 350 360 370 380 390 FLJ001 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA :::::::::::.::::::::::.::.::::::::::.:: .:: ::::::.::::::::: gi|109 LQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLTALYLQVA 900 910 920 930 940 950 400 410 420 430 440 450 FLJ001 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM :::..:::.::::::::::::::::::: .::::::::::.::.:::::::::::::::: gi|109 SIGSQGAQALGEALAVNRTLEILDLRGNDVGVAGAKALANGLKLNSSLRRLNLQENSLGM 960 970 980 990 1000 1010 460 470 480 490 FLJ001 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM :::: .::::: :: :.::::::: ::.:::::::.::. ::::::::: gi|109 DGAIYVATALSENHGLHHINLQGNPIGESGARMISQAIEKNAPTCTVEM 1020 1030 1040 1050 1060 >>gi|158563868|sp|Q5DU56.2|NLRC3_MOUSE RecName: Full=Pro (1064 aa) initn: 5763 init1: 2494 opt: 2494 Z-score: 2759.7 bits: 521.2 E(): 5.2e-145 Smith-Waterman score: 2494; 80.762% identity (93.788% similar) in 499 aa overlap (1-499:566-1064) 10 20 30 FLJ001 VLHCLHELQHTELARSVEEAMESGALARLT ::.:: ::.::::: ::::::.::.:: .: gi|158 GEHQSYRDQVAEVLQGFLHPDAAVCARAINVLYCLSELRHTELACSVEEAMRSGTLAGMT 540 550 560 570 580 590 40 50 60 70 80 90 FLJ001 GPAHRAALAYLLQVSDACAQEANLSLSLSQGVLQSLLPQLLYCRKLRLDTNQFQDPVMEL .:.::.:::::::.:: :. ::..:: ::: ::::::::::::..::::.:::::::::: gi|158 SPSHRTALAYLLQMSDICSPEADFSLCLSQHVLQSLLPQLLYCQSLRLDNNQFQDPVMEL 600 610 620 630 640 650 100 110 120 130 140 150 FLJ001 LGSVLSGKDCRIQKISLAENQISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGAKALAD ::::::::::::.:::::::::.::::::::::::::::: .::::.::::: ::::::: gi|158 LGSVLSGKDCRIRKISLAENQIGNKGAKALARSLLVNRSLITLDLRSNSIGPPGAKALAD 660 670 680 690 700 710 160 170 180 190 200 210 FLJ001 ALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQ ::::::::::::::.:...:::. .::::.::.:.:::.:::: :: .:::.::::::: gi|158 ALKINRTLTSLSLQSNVIKDDGVMCVAEALVSNQTISMLQLQKNLIGLIGAQQMADALKQ 720 730 740 750 760 770 220 230 240 250 260 270 FLJ001 NRSLKELMFSSNSIGDGGAKALAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTL ::::: ::::::.::: :: :::::::::: ::.:::::::::: ::..:: :::.:::: gi|158 NRSLKALMFSSNTIGDRGAIALAEALKVNQILENLDLQSNSISDMGVTVLMRALCSNQTL 780 790 800 810 820 830 280 290 300 310 320 330 FLJ001 LSLSLRENSISPEGAQAIAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLH ::.:::::::::::::...::: :.:::.::::::::::.::.:::::: ::..:: :: gi|158 SSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGENHSLTHLH 840 850 860 870 880 890 340 350 360 370 380 390 FLJ001 LQWNFIQAGAAQALGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVA :::::::::::.::::::::::.::.::::::::::.:: .:: ::::::.: ::::::: gi|158 LQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQVA 900 910 920 930 940 950 400 410 420 430 440 450 FLJ001 SIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGM :::..:::.:::::.::::::::::::: .:.:::::::::::.:::::::::::::::: gi|158 SIGSQGAQALGEALTVNRTLEILDLRGNDVGAAGAKALANALKLNSSLRRLNLQENSLGM 960 970 980 990 1000 1010 460 470 480 490 FLJ001 DGAICIATALSGNHRLQHINLQGNHIGDSGARMISEAIKTNAPTCTVEM :::: .:.::: :: :.::::::: ::.:.::::::::::::::::::. gi|158 DGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVEI 1020 1030 1040 1050 1060 499 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 17:09:06 2009 done: Fri Feb 27 17:16:10 2009 Total Scan time: 948.680 Total Display time: 0.200 Function used was FASTA [version 34.26.5 April 26, 2007]