# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj01842.fasta.huge -Q ../query/FLJ00265.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00265, 155 aa vs ./tmplib.10216 library 2210839 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.2537+/-0.00362; mu= 12.0145+/- 0.243 mean_var=88.1341+/-20.747, 0's: 0 Z-trim: 32 B-trim: 22 in 1/39 Lambda= 0.136616 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1297 ( 2242 res) fg03883 (2242) 320 73.5 6.5e-14 KIAA0968 ( 527 res) hj06483 ( 527) 283 65.3 4.4e-12 KIAA1639 ( 2584 res) af14886 (2584) 271 63.9 5.7e-11 KIAA0369 ( 794 res) hh00177 ( 794) 259 60.8 1.5e-10 KIAA0096 ( 766 res) ha01240s1 ( 766) 254 59.8 2.9e-10 KIAA1765 ( 608 res) fj12188(revised) ( 608) 242 57.3 1.3e-09 KIAA1142 ( 467 res) hh05864 ( 467) 196 48.1 6e-07 KIAA0807 ( 1329 res) hk04449(revised) (1329) 200 49.5 6.3e-07 KIAA0787 ( 557 res) hk05521s1 ( 557) 184 45.8 3.4e-06 KIAA1264 ( 753 res) hj01058 ( 753) 184 46.0 4e-06 KIAA0973 ( 1583 res) hj06871 (1583) 187 47.0 4.1e-06 KIAA0561 ( 1308 res) hh01676 (1308) 186 46.7 4.2e-06 FLJ00113 ( 419 res) as00113 ( 419) 175 43.9 9.8e-06 FLJ00263 ( 764 res) sj01530 ( 764) 177 44.6 1.1e-05 KIAA1278 ( 1311 res) hg03689(revised) (1311) 176 44.8 1.7e-05 KIAA0303 ( 2137 res) hg00009 (2137) 178 45.5 1.7e-05 KIAA0965 ( 489 res) hj06174s1 ( 489) 171 43.2 1.9e-05 KIAA0619 ( 1428 res) hg04117 (1428) 174 44.4 2.3e-05 KIAA0999 ( 1371 res) fj10213 (1371) 172 44.0 3e-05 KIAA0781 ( 950 res) hk09678 ( 950) 169 43.2 3.6e-05 KIAA0175 ( 656 res) ha02337 ( 656) 163 41.8 6.6e-05 KIAA0551 ( 1385 res) hh00867s1 (1385) 162 42.0 0.00012 KIAA1477 ( 870 res) fj04927 ( 870) 160 41.4 0.00012 KIAA1811 ( 715 res) ha06731 ( 715) 156 40.5 0.00018 KIAA1860 ( 689 res) fh18358 ( 689) 153 39.8 0.00027 KIAA1124 ( 1760 res) fg05708 (1760) 154 40.6 0.0004 KIAA0722 ( 1066 res) hk02030s1 (1066) 146 38.7 0.00089 KIAA0687 ( 1175 res) hk02992 (1175) 140 37.6 0.0021 KIAA1995 ( 1011 res) bh00088 (1011) 138 37.1 0.0026 KIAA0137 ( 801 res) ha02915s1 ( 801) 137 36.8 0.0026 KIAA0623 ( 1100 res) hg04615 (1100) 135 36.6 0.0041 KIAA0537 ( 698 res) hg03925 ( 698) 128 34.9 0.0081 KIAA1360 ( 796 res) fj02325 ( 796) 116 32.6 0.045 KIAA0213 ( 1626 res) ha04841s1 (1626) 118 33.5 0.052 KIAA1760 ( 2219 res) af00030 (2219) 117 33.5 0.072 KIAA0204 ( 1164 res) ha02801 (1164) 109 31.5 0.15 FLJ00262 ( 1112 res) sj01172 (1112) 108 31.3 0.16 KIAA1790 ( 1369 res) fh24104 (1369) 108 31.4 0.19 KIAA1361 ( 1005 res) fj02367 (1005) 106 30.8 0.2 KIAA0135 ( 1351 res) ha01203s1 (1351) 102 30.2 0.42 KIAA0151 ( 723 res) ha03241 ( 723) 94 28.2 0.86 KIAA0536 ( 1028 res) hg03863 (1028) 95 28.7 0.93 KIAA0344 ( 2066 res) hg01568 (2066) 97 29.5 1.1 KIAA0881 ( 1064 res) hk07534 (1064) 93 28.3 1.2 KIAA1901 ( 1265 res) hh03635 (1265) 92 28.2 1.6 KIAA1222 ( 742 res) fh03567 ( 742) 89 27.3 1.7 KIAA1459 ( 853 res) fh16961 ( 853) 87 27.0 2.5 KIAA1143 ( 116 res) hj00512 ( 116) 78 24.0 2.7 KIAA2002 ( 764 res) bf00111 ( 764) 82 25.9 4.6 KIAA0413 ( 1237 res) hh00077s1 (1237) 84 26.6 4.6 >>KIAA1297 ( 2242 res) fg03883 (2242 aa) initn: 310 init1: 265 opt: 320 Z-score: 343.1 bits: 73.5 E(): 6.5e-14 Smith-Waterman score: 320; 45.283% identity (72.642% similar) in 106 aa overlap (23-128:769-873) 10 20 30 40 50 FLJ002 QCSRFLIDTSILPLCLLNCRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTD : : ..:::::.:::.:: . :: :: KIAA12 VKPENLLVWDGAAGEQQVRICDFGNAQELTPGEPQYCQYGTPEFVAPEIVNQSPVSGVTD 740 750 760 770 780 790 60 70 80 90 100 110 FLJ002 MWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKE .: :::.:.. :.:.:::.:.:: :: :: .:. : ..:.::. :. :.:... KIAA12 IWPVGVVAFLCLTGISPFVGENDRTTLMNIRNYNVAFEETTFLSLSREARGFLIKVLVQD 800 810 820 830 840 850 120 130 140 150 FLJ002 KSWRISASEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVTK . : .: :.:.:::. KIAA12 R-LRPTAEETLEHPWFKTQAKGAEVSTDHLKLFLSRRRWQRSQISYKCHLVLRPIPELLR 860 870 880 890 900 910 >>KIAA0968 ( 527 res) hj06483 (527 aa) initn: 282 init1: 282 opt: 283 Z-score: 310.3 bits: 65.3 E(): 4.4e-12 Smith-Waterman score: 283; 42.574% identity (72.277% similar) in 101 aa overlap (32-132:224-323) 10 20 30 40 50 60 FLJ002 CSRFLIDTSILPLCLLNCRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAY ::: .:.:::. : . :.:.:. ::: : KIAA09 SKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILY 200 210 220 230 240 250 70 80 90 100 110 120 FLJ002 MLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASE .:: : :: ... . ..: : .:. . :.. .. :::..:.:.: . : ::.:.: KIAA09 ILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAE 260 270 280 290 300 310 130 140 150 FLJ002 ALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVTK ::::::.: :. KIAA09 ALKHPWIS-HRSTVASCMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSGGKSGGNKK 320 330 340 350 360 370 >>KIAA1639 ( 2584 res) af14886 (2584 aa) initn: 286 init1: 254 opt: 271 Z-score: 290.3 bits: 63.9 E(): 5.7e-11 Smith-Waterman score: 271; 38.679% identity (67.925% similar) in 106 aa overlap (23-128:1232-1337) 10 20 30 40 50 FLJ002 QCSRFLIDTSILPLCLLNCRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTD : : ..:.:::..::... . :: .: KIAA16 LDIKPSNILMVHPAREDIKICDFGFAQNITPAELQFSQYGSPEFVSPEIIQQNPVSEASD 1210 1220 1230 1240 1250 1260 60 70 80 90 100 110 FLJ002 MWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKE .:..:::.:. :. ::: :..: :: :.: : . . .::.::.::. : . KIAA16 IWAMGVISYLSLTCSSPFAGESDRATLLNVLEGRVSWSSPMAAHLSEDAKDFIKATLQRA 1270 1280 1290 1300 1310 1320 120 130 140 150 FLJ002 KSWRISASEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVTK . : ::.. :.:::. KIAA16 PQARPSAAQCLSHPWFLKSMPAEEAHFINTKQLKFLLARSRWQRSLMSYKSILVMRSIPE 1330 1340 1350 1360 1370 1380 >>KIAA0369 ( 794 res) hh00177 (794 aa) initn: 271 init1: 149 opt: 259 Z-score: 282.8 bits: 60.8 E(): 1.5e-10 Smith-Waterman score: 259; 37.500% identity (74.038% similar) in 104 aa overlap (32-133:614-717) 10 20 30 40 50 60 FLJ002 CSRFLIDTSILPLCLLNCRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAY ::: ..:::.. .. .:.:..:::.: KIAA03 VYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVITY 590 600 610 620 630 640 70 80 90 100 110 FLJ002 MLLSGLSPFLGD-NDAETL-NNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISA .:: :. :: :. .: :.: ..:: . :. . ....:. :::.:. .:. . . :.:: KIAA03 ILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQRFSA 650 660 670 680 690 700 120 130 140 150 FLJ002 SEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVTK ..:.:::..: : KIAA03 VQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIALDHGFTIKRSGS 710 720 730 740 750 760 >>KIAA0096 ( 766 res) ha01240s1 (766 aa) initn: 236 init1: 133 opt: 254 Z-score: 277.7 bits: 59.8 E(): 2.9e-10 Smith-Waterman score: 254; 35.455% identity (67.273% similar) in 110 aa overlap (20-128:165-270) 10 20 30 40 FLJ002 QCSRFLIDTSILPLCLLNCRYKPREKLKVNFGTPEFLAPEVVNYDFVSF ...: .:: .. :. . :::.. : . KIAA00 HVVHRDLKPENVVFFEKQGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDEYDA 140 150 160 170 180 190 50 60 70 80 90 100 FLJ002 PT-DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKL :. :.::.::: .::. : :: ::.:::. :. :.. . .. .:.: :..:... KIAA00 PAVDIWSLGVILFMLVCGQPPFQEANDSETLTMIMDCKYTVPSH----VSKECKDLITRM 200 210 220 230 240 250 110 120 130 140 150 FLJ002 LIKEKSWRISASEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVTK : .. . : : : .:::: KIAA00 LQRDPKRRASLEEIENHPWLQGVDPSPATKYNIPLVSYKNLSEEEHNSIIQRMVLGDIAD 260 270 280 290 300 310 >>KIAA1765 ( 608 res) fj12188(revised) (608 aa) initn: 231 init1: 138 opt: 242 Z-score: 265.9 bits: 57.3 E(): 1.3e-09 Smith-Waterman score: 242; 31.405% identity (68.595% similar) in 121 aa overlap (32-150:475-595) 10 20 30 40 50 60 FLJ002 CSRFLIDTSILPLCLLNCRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAY ::: ..:::... .. .:::..::: : KIAA17 VQRNEDKSTTLKLADFGLAKHVVRPIFTVCGTPTYVAPEILSEKGYGLEVDMWAAGVILY 450 460 470 480 490 500 70 80 90 100 110 FLJ002 MLLSGLSPFLG-DNDAETLNNILAC-RWDLEDEEFQDISEEAKEFISKLLIKEKSWRISA .:: :. :: . . : . : ::. .... ...::. ::...:.::. . . : .: KIAA17 ILLCGFPPFRSPERDQDELFNIIQLGHFEFLPPYWDNISDAAKDLVSRLLVVDPKKRYTA 510 520 530 540 550 560 120 130 140 150 FLJ002 SEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVTK ..:.:::. . .. ::. . .:... KIAA17 HQVLQHPWIETAGKTNTVKRQKQVSPSSEGHFRSQHKRVVEQVS 570 580 590 600 >>KIAA1142 ( 467 res) hh05864 (467 aa) initn: 189 init1: 104 opt: 196 Z-score: 218.1 bits: 48.1 E(): 6e-07 Smith-Waterman score: 196; 25.532% identity (60.284% similar) in 141 aa overlap (7-145:330-465) 10 20 30 FLJ002 QCSRFLIDTSILPLCLLNCRYKPREKLKVNFGTPEF . : . .: . ::.: : ::: . KIAA11 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV--GTPYW 300 310 320 330 340 350 40 50 60 70 80 90 FLJ002 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED--EEF .:::... . .:.::.:... ...: :.... .... : : .: ... KIAA11 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNL 360 370 380 390 400 410 100 110 120 130 140 150 FLJ002 QDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVT . .: : :...::... . : .:.: ::::.:. . . ..:: KIAA11 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQNRTR 420 430 440 450 460 FLJ002 K >>KIAA0807 ( 1329 res) hk04449(revised) (1329 aa) initn: 183 init1: 160 opt: 200 Z-score: 217.7 bits: 49.5 E(): 6.3e-07 Smith-Waterman score: 200; 33.981% identity (65.049% similar) in 103 aa overlap (32-129:218-317) 10 20 30 40 50 60 FLJ002 CSRFLIDTSILPLCLLNCRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAY ::::..::::. . . :.: :..:.: : KIAA08 SKMGLMSLTTNLYEGHIEKDAREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILY 190 200 210 220 230 240 70 80 90 100 110 FLJ002 MLLSGLSPFLGDNDAETLNNILACR--WDLEDEEFQDISEEAKEFISKLLIKEKSWRI-- .: : ::.::. : ...... . : :: . .:... :::: .. :. KIAA08 EFLVGCVPFFGDTPEELFGQVISDEIVWPEGDEA---LPPDAQDLTSKLLHQNPLERLGT 250 260 270 280 290 300 120 130 140 150 FLJ002 -SASEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVTK :: :. .::... KIAA08 GSAYEVKQHPFFTGLDWTGLLRQKAEFIPQLESEDDTSYFDTRSERYHHMDSEDEEEVSE 310 320 330 340 350 360 >>KIAA0787 ( 557 res) hk05521s1 (557 aa) initn: 168 init1: 99 opt: 184 Z-score: 204.5 bits: 45.8 E(): 3.4e-06 Smith-Waterman score: 184; 32.174% identity (57.391% similar) in 115 aa overlap (21-131:338-450) 10 20 30 40 FLJ002 QCSRFLIDTSILPLCLLNCRYKPREKLKVN-FGTPEFLAPEVVNYD---F .: . : : ::: :.::: .. : KIAA07 KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIF 310 320 330 340 350 360 50 60 70 80 90 100 FLJ002 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFIS . :.:..:: : .. : ::. :. :.. . . :: . ::.:. :..:. KIAA07 SGKALDVWAMGVTLYCFVFGQCPFM-DERIMCLHSKIKSQ-ALEFPDQPDIAEDLKDLIT 370 380 390 400 410 420 110 120 130 140 150 FLJ002 KLLIKEKSWRISASEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVTK ..: :. :: . : :::.. : KIAA07 RMLDKNPESRIVVPEIKLHPWVTRHGAEPLPSEDENCTLVEVTEEEVENSVKHIPSLATV 430 440 450 460 470 480 >>KIAA1264 ( 753 res) hj01058 (753 aa) initn: 111 init1: 111 opt: 184 Z-score: 203.2 bits: 46.0 E(): 4e-06 Smith-Waterman score: 184; 27.419% identity (60.484% similar) in 124 aa overlap (7-128:616-734) 10 20 30 FLJ002 QCSRFLIDTSILPLCLLNCRYKPREKLKVNFGTPEF : : . .: . :..: : ::: . KIAA12 VLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLV--GTPYW 590 600 610 620 630 640 40 50 60 70 80 90 FLJ002 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED--EEF .::::.. . .:.::.:... ...: :.... ... : : .: ... KIAA12 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI---RDSLPPRVKDL 650 660 670 680 690 700 100 110 120 130 140 150 FLJ002 QDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRLNAQKKKNRGSDAQDFVT . .: . :.. .:..: : : .:.: : ::.: KIAA12 HKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPSCIVPLMRQYRHH 710 720 730 740 750 FLJ002 K 155 residues in 1 query sequences 2210839 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:48:25 2009 done: Fri Feb 27 10:48:25 2009 Total Scan time: 0.330 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]