# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj02022.fasta.huge -Q ../query/FLJ00186.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00186, 185 aa vs ./tmplib.10216 library 2210809 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.9275+/-0.00324; mu= 14.7700+/- 0.219 mean_var=64.6613+/-14.251, 0's: 0 Z-trim: 4 B-trim: 0 in 0/40 Lambda= 0.159497 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0168 ( 331 res) ha02316 ( 331) 171 47.4 7.9e-07 KIAA0313 ( 1508 res) hg00186 (1508) 101 32.2 0.14 KIAA0159 ( 1406 res) ha03574 (1406) 92 30.0 0.58 KIAA1596 ( 1151 res) fj09605 (1151) 91 29.7 0.6 KIAA0799 ( 2111 res) fg01615y1 (2111) 80 27.5 5.1 KIAA1163 ( 437 res) hj05329 ( 437) 72 24.8 6.8 KIAA0226 ( 973 res) fg02838 ( 973) 75 25.9 6.9 KIAA0213 ( 1626 res) ha04841s1 (1626) 77 26.7 6.9 KIAA1901 ( 1265 res) hh03635 (1265) 76 26.3 6.9 KIAA1713 ( 1652 res) fh22344 (1652) 76 26.4 8.2 KIAA1184 ( 380 res) hg01696a ( 380) 69 24.0 10 KIAA1440 ( 1377 res) hg02441b (1377) 73 25.7 12 KIAA0887 ( 443 res) hk07788 ( 443) 68 23.9 13 KIAA1746 ( 1098 res) pj01729 (1098) 71 25.1 14 FLJ00307 ( 452 res) sh05777 ( 452) 67 23.7 15 KIAA1020 ( 638 res) fg00473s1 ( 638) 68 24.1 16 KIAA2021 ( 648 res) ah05004 ( 648) 68 24.1 16 KIAA0072 ( 503 res) ha01357 ( 503) 67 23.7 16 KIAA0635 ( 864 res) hj03253 ( 864) 69 24.5 17 KIAA1428 ( 709 res) fh02979s1 ( 709) 68 24.2 17 FLJ00288 ( 217 res) sh02579 ( 217) 63 22.4 18 KIAA1880 ( 642 res) ah02167 ( 642) 67 23.9 19 KIAA1931 ( 514 res) fj14393 ( 514) 66 23.5 19 KIAA0082 ( 882 res) ha02350 ( 882) 68 24.3 20 FLJ00375 ( 708 res) sh07824 ( 708) 67 23.9 20 KIAA1445 ( 1202 res) fg03469b (1202) 69 24.7 21 KIAA0668 ( 742 res) hk02329 ( 742) 67 23.9 21 KIAA0655 ( 1083 res) hk01768 (1083) 68 24.4 23 KIAA1558 ( 882 res) hj01607 ( 882) 67 24.0 23 KIAA0899 ( 939 res) hk09548s1 ( 939) 67 24.1 24 KIAA1800 ( 736 res) fj21226 ( 736) 66 23.7 24 KIAA1331 ( 589 res) fh15253s1 ( 589) 65 23.4 25 FLJ00173 ( 1269 res) sj00667 (1269) 68 24.5 25 KIAA1018 ( 1040 res) hj06112 (1040) 67 24.1 26 KIAA0962 ( 822 res) hj05850s1 ( 822) 66 23.8 26 KIAA0963 ( 1391 res) hj05936 (1391) 68 24.5 26 KIAA1441 ( 1258 res) hg02860b (1258) 67 24.2 29 KIAA0658 ( 589 res) hk01862 ( 589) 64 23.1 29 FLJ00277 ( 357 res) sh01540 ( 357) 62 22.4 29 FLJ00195 ( 639 res) sj02957 ( 639) 64 23.2 31 KIAA1426 ( 1066 res) fg04231s1 (1066) 66 23.9 31 KIAA1096 ( 1919 res) pf00402 (1919) 68 24.7 32 KIAA2038 ( 917 res) pj01991 ( 917) 65 23.6 33 FLJ00336 ( 333 res) sj05826 ( 333) 61 22.1 33 FLJ00169 ( 432 res) sh07709 ( 432) 62 22.5 33 FLJ00085 ( 292 res) as00085 ( 292) 60 21.8 35 KIAA0239 ( 849 res) ha06313 ( 849) 64 23.3 36 KIAA0079 ( 1102 res) ha03543 (1102) 65 23.7 37 KIAA1856 ( 1134 res) fh03203 (1134) 65 23.7 37 KIAA1497 ( 730 res) hg01608 ( 730) 63 23.0 39 >>KIAA0168 ( 331 res) ha02316 (331 aa) initn: 123 init1: 70 opt: 171 Z-score: 215.9 bits: 47.4 E(): 7.9e-07 Smith-Waterman score: 171; 26.163% identity (58.140% similar) in 172 aa overlap (5-173:114-273) 10 20 30 FLJ001 VCKPVEETQRPPTLQEIKQKIDSYNTREKNCLGM . :.. :: ... .. :: :. KIAA01 PPPSSSSWHSGCNLGAQGTTLKPLTVPKVQISEVDAPPEGDQMPSSTDSR--------GL 90 100 110 120 130 40 50 60 70 80 90 FLJ001 K-LSEDGTYTGFIKVHLKLRRPVTVPAGIRPQSIYDAIKEVNLAATTDKRTSFYLP-LDA : :.:: . . .:: .: . . : .: . ...:: . : . KIAA01 KPLQEDTPQLMRTRSDVGVRRRGNVRTPSDQRRIRRHRFSIN-GHFYNHKTSVFTPAYGS 140 150 160 170 180 190 100 110 120 130 140 150 FLJ001 IKQLHISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKLSIADRPLYLRL . ...:.:: :. .:.. ::.:: . .. ..:::. .: .:. :::. .: :: :. KIAA01 VTNVRINSTMTTPQVLKLLLNKFKIENSAEEFALYV-VHTSGEK--QKLKATDYPLIARI 200 210 220 230 240 250 160 170 180 FLJ001 LAGPDTEVLS-FVLKENETGEVEVGLDPLCKPRP : :: .. . :....... :: KIAA01 LQGPCEQISKVFLMEKDQVEEVTYDVAQYIKFEMPVLKSFIQKLQEEEDREVKKLMRKYT 260 270 280 290 300 310 >>KIAA0313 ( 1508 res) hg00186 (1508 aa) initn: 34 init1: 34 opt: 101 Z-score: 121.5 bits: 32.2 E(): 0.14 Smith-Waterman score: 101; 23.571% identity (57.857% similar) in 140 aa overlap (18-146:548-687) 10 20 30 40 FLJ001 VCKPVEETQRPPTLQEIKQKIDSYNTREKNCLGMKLSEDGTYTGFIK : .:. . : .:. :.: . .:. . KIAA03 VEQVIGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIGIGQSQDDSIVGLRQ 520 530 540 550 560 570 50 60 70 80 90 100 FLJ001 V-HLKLRRPVT-VPAGIRPQSIYDAIKEVNLAATTDKRTSFYLPLDAIKQ---LHISSTT . :. ::. . .. :. . . . ....:: : . . : .: . ::. : KIAA03 TKHIPTALPVSGTLSSSNPDLLQSHHRILDFSATPDLPDQVLRVFKADQQSRYIMISKDT 580 590 600 610 620 630 110 120 130 140 150 FLJ001 TVSEVIQGLLKKFMVVDNPQKFALFK-RIHKDGQV----LFQKLS-IADRPLYLRLLAGP :..::. ...: :. .:....: . . .: . : ..:: .::: KIAA03 TAKEVVIQAIREFAVTATPDQYSLCEVSVTPEGVIKQRRLPDQLSKLADRIQLSGRYYLK 640 650 660 670 680 690 160 170 180 FLJ001 DTEVLSFVLKENETGEVEVGLDPLCKPRP KIAA03 NNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMRNFELFRNIEPTEYIDDLFKL 700 710 720 730 740 750 >>KIAA0159 ( 1406 res) ha03574 (1406 aa) initn: 77 init1: 77 opt: 92 Z-score: 110.6 bits: 30.0 E(): 0.58 Smith-Waterman score: 99; 30.769% identity (60.440% similar) in 91 aa overlap (8-98:1236-1310) 10 20 30 FLJ001 VCKPVEETQRPPTLQEIKQKIDSYNTREKNCLGMKLS .: : : . ... .:.. .:.: ::: KIAA01 KQTESLVEKLCQRFRTSLTERQQRDLAYCVSQLPLTERGLRKMLDNF-----DCFGDKLS 1210 1220 1230 1240 1250 1260 40 50 60 70 80 90 FLJ001 EDGTYTGFIKVHLKLRRPVTVPAGIRPQSIYDAIKEVNLAATTDKRTSFYLPLDAIKQLH ... ...:..: :::: . : : ..: : . : .: : . ::.::.:. KIAA01 DESIFSAFLSVVGKLRRGAK-PEG---KAIIDEF-EQKLRACHTR------GLDGIKELE 1270 1280 1290 1300 100 110 120 130 140 150 FLJ001 ISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKLSIADRPLYLRLLAGPD : KIAA01 IGQAGSQRAPSAKKPSTGSRYQPLASTASDNDFVTPEPRRTTRRHPNTQQRASKKKPKVV 1310 1320 1330 1340 1350 1360 >>KIAA1596 ( 1151 res) fj09605 (1151 aa) initn: 76 init1: 54 opt: 91 Z-score: 110.4 bits: 29.7 E(): 0.6 Smith-Waterman score: 91; 30.864% identity (56.790% similar) in 81 aa overlap (57-137:810-888) 30 40 50 60 70 80 FLJ001 REKNCLGMKLSEDGTYTGFIKVHLKLRRPVTVPAGIRPQSIYDAIKEVNLAATTDKRTSF .::.: :: . .:: : .:.::. KIAA15 ENNVNDKRESNIAVNPSTVKKNKQQDHCLNSVPSGSSAQSKVRSTPRVNPLAKQSKQTSL 780 790 800 810 820 830 90 100 110 120 130 140 FLJ001 YLPLDAIKQLHISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKLSIADR : :.:... . . .:: :. : .::. . : .:::..: KIAA15 NLK-DTISEVSDFKPQNHNEV-QSTTPPFTTVDSQKDCRKFPVPQKDGSALEDSSTSGAS 840 850 860 870 880 890 150 160 170 180 FLJ001 PLYLRLLAGPDTEVLSFVLKENETGEVEVGLDPLCKPRP KIAA15 CSKSRPHLAGTHTSLRLAQEGKGTCILVGGHEITSGLEVISSLRAIHGLQVEVCPLNGCD 900 910 920 930 940 950 >>KIAA0799 ( 2111 res) fg01615y1 (2111 aa) initn: 106 init1: 80 opt: 80 Z-score: 93.7 bits: 27.5 E(): 5.1 Smith-Waterman score: 80; 27.451% identity (68.627% similar) in 51 aa overlap (95-145:1766-1816) 70 80 90 100 110 120 FLJ001 QSIYDAIKEVNLAATTDKRTSFYLPLDAIKQLHISSTTTVSEVIQGLLKKFMVVDNPQKF .. :.: ::..::.. :.. . . :. . : KIAA07 EFVPSRDEIEALIHRQEMTSTVYCHGGGSCKITINSHTTAGEVVEKLIRGLAMEDSRNMF 1740 1750 1760 1770 1780 1790 130 140 150 160 170 180 FLJ001 ALFKRIHKDGQVLFQKLSIADRPLYLRLLAGPDTEVLSFVLKENETGEVEVGLDPLCKPR :::. . ... .. .:: KIAA07 ALFEYNGHVDKAIESRTVVADVLAKFEKLAATSEVGDLPWKFYFKLYCFLDTDNVPKDSV 1800 1810 1820 1830 1840 1850 >>KIAA1163 ( 437 res) hj05329 (437 aa) initn: 57 init1: 57 opt: 72 Z-score: 91.5 bits: 24.8 E(): 6.8 Smith-Waterman score: 72; 36.842% identity (63.158% similar) in 38 aa overlap (130-166:264-301) 100 110 120 130 140 150 FLJ001 STTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKLSIADRPLYLRLLAGPD-T . :::..:::.... : .: : . KIAA11 CDTKQQGMTKVWVTPSNERVLDEVTNGTVSVSKDGSLLFQQVQVEDGGVYTCYAMGETFN 240 250 260 270 280 290 160 170 180 FLJ001 EVLSFVLKENETGEVEVGLDPLCKPRP :.:: :: KIAA11 ETLSVELKVHNFTLHGHHDTLNTAYTTLVGCILSVVLVLIYLYLTPCRCWCRGVEKPSSH 300 310 320 330 340 350 >>KIAA0226 ( 973 res) fg02838 (973 aa) initn: 51 init1: 51 opt: 75 Z-score: 91.3 bits: 25.9 E(): 6.9 Smith-Waterman score: 75; 22.951% identity (57.377% similar) in 122 aa overlap (5-121:524-644) 10 20 30 FLJ001 VCKPVEETQRPPTLQEIKQKID--SYNTREKNCL ::: . .::.:::: . : :: : KIAA02 NAHFSISESLIAAIELMKCNMMSQCLEEEEVEEEDSDREIQELKQKIRLRRQQIRTKNLL 500 510 520 530 540 550 40 50 60 70 80 FLJ001 GM-KLSEDGTY-TGFIKVHLKLRRPVTVPAGIRPQSIYD-AIKEVNLAATTDKRTSFYLP : . .: :.. . . ... : . . . . . . :..... .: . .. .. KIAA02 PMYQEAEHGSFRVTSSSSQFSSRDSAQLSDSGSADEVDEFEIQDADIRRNTASSSKSFVS 560 570 580 590 600 610 90 100 110 120 130 140 FLJ001 LDAIKQLHISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKLSIADRPLY ..... . ::.. : .::::.: .. : KIAA02 SQSFSHCFLHSTSA-EAVAMGLLKQFEGMQLPAASELEWLVPEHDAPQKLLPIPDSLPIS 620 630 640 650 660 670 150 160 170 180 FLJ001 LRLLAGPDTEVLSFVLKENETGEVEVGLDPLCKPRP KIAA02 PDDGQHADIYKLRIRVRGNLEWAPPRPQIIFNVHPAPTRKIAVAKQNYRCAGCGIRTDPD 680 690 700 710 720 730 >>KIAA0213 ( 1626 res) ha04841s1 (1626 aa) initn: 49 init1: 49 opt: 77 Z-score: 91.3 bits: 26.7 E(): 6.9 Smith-Waterman score: 77; 36.585% identity (60.976% similar) in 41 aa overlap (6-41:531-571) 10 20 30 FLJ001 VCKPVEETQRPPTLQEIKQKID-SYNTREKNCLGM :: : . ::.: :: :.. . ..:.. KIAA02 RPSKGNEPEYEGDDTEGELKELESSTDESEEEQISDPRVPEIRQPIDNSFDIQSRDCISK 510 520 530 540 550 560 40 50 60 70 80 90 FLJ001 KL----SEDGTYTGFIKVHLKLRRPVTVPAGIRPQSIYDAIKEVNLAATTDKRTSFYLPL :: ::: . KIAA02 KLERLESEDDSLGWGAPDWSTEAGFSRHCLTSIYRPFVDKALKQMGLRKLILRLHKLMDG 570 580 590 600 610 620 >>KIAA1901 ( 1265 res) hh03635 (1265 aa) initn: 83 init1: 60 opt: 76 Z-score: 91.3 bits: 26.3 E(): 6.9 Smith-Waterman score: 76; 26.316% identity (57.895% similar) in 76 aa overlap (71-145:39-114) 50 60 70 80 90 FLJ001 TYTGFIKVHLKLRRPVTVPAGIRPQSIYDAIKEVNLAATTDK-RTSFYLPLDAIKQLHIS :::.:.. ..: : . .. ... KIAA19 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 10 20 30 40 50 60 100 110 120 130 140 150 FLJ001 STTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKLSIADRPLYLRLLAGPDTE . . : .. . ..:.: . :::::. . ::::. .: : KIAA19 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 70 80 90 100 110 120 160 170 180 FLJ001 VLSFVLKENETGEVEVGLDPLCKPRP KIAA19 RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYN 130 140 150 160 170 180 >>KIAA1713 ( 1652 res) fh22344 (1652 aa) initn: 73 init1: 51 opt: 76 Z-score: 90.0 bits: 26.4 E(): 8.2 Smith-Waterman score: 76; 29.231% identity (63.077% similar) in 65 aa overlap (57-121:639-695) 30 40 50 60 70 80 FLJ001 REKNCLGMKLSEDGTYTGFIKVHLKLRRPVTVPAGIRPQSIYDAIKEVNLAATTDKRTSF .::... .: :::: .....:: .: KIAA17 ENIPVSHLSEKIVSSTSSENSSVPMLFNKNSVPVSVCSTAISGAIKEHPFVSSVDK-SSV 610 620 630 640 650 660 90 100 110 120 130 140 FLJ001 YLPLDAIKQLHISSTTTVSEVIQGLLKKFMVVDNPQKFALFKRIHKDGQVLFQKLSIADR . .: :..::.: ..:: .. .:.: KIAA17 LMSVD-------SANTTISACNISMLKTIQGTDTPCIAIIPKCIESTPISATTEGSSISS 670 680 690 700 710 720 150 160 170 180 FLJ001 PLYLRLLAGPDTEVLSFVLKENETGEVEVGLDPLCKPRP KIAA17 SMDDKQLLISSSSASNLVSTQYTSVPTPSIGNNLPNLSTSSVLIPPMGINNRFPSEKIAI 730 740 750 760 770 780 185 residues in 1 query sequences 2210809 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:44:17 2009 done: Fri Feb 27 10:44:17 2009 Total Scan time: 0.350 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]