# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj02282.fasta.huge -Q ../query/FLJ00188.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00188, 201 aa vs ./tmplib.10216 library 2210793 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.3467+/-0.00411; mu= 8.8697+/- 0.277 mean_var=104.4701+/-23.571, 0's: 0 Z-trim: 4 B-trim: 15 in 1/39 Lambda= 0.125481 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00298 ( 527 res) sh04009 ( 527) 1375 258.8 3.3e-70 KIAA0424 ( 567 res) hh01267 ( 567) 731 142.2 4.3e-35 KIAA1112 ( 694 res) hj05505s1 ( 694) 617 121.7 8e-29 KIAA0793 ( 1055 res) hk05692 (1055) 120 31.9 0.13 KIAA1971 ( 830 res) fk08985 ( 830) 106 29.3 0.64 KIAA1415 ( 1621 res) hg04328s1 (1621) 106 29.6 1 KIAA1639 ( 2584 res) af14886 (2584) 106 29.8 1.4 KIAA1855 ( 1270 res) fg04654 (1270) 94 27.3 3.8 KIAA0665 ( 760 res) hk02064 ( 760) 87 25.8 6.5 KIAA0269 ( 567 res) ha06751 ( 567) 84 25.1 7.8 KIAA0010 ( 1086 res) ha00408 (1086) 85 25.6 11 KIAA0902 ( 910 res) hk09777 ( 910) 84 25.3 11 FLJ00384 ( 118 res) sj03287 ( 118) 73 22.4 11 KIAA1275 ( 1140 res) hk10413 (1140) 85 25.6 11 KIAA1046 ( 427 res) hh00940 ( 427) 79 24.1 12 KIAA0687 ( 1175 res) hk02992 (1175) 84 25.4 13 KIAA0861 ( 982 res) hk06521 ( 982) 83 25.2 13 KIAA0984 ( 728 res) hj07670 ( 728) 81 24.7 13 KIAA0564 ( 1441 res) hh01811 (1441) 84 25.5 15 KIAA0355 ( 1082 res) hg01881 (1082) 82 25.0 15 KIAA0036 ( 632 res) ha02085 ( 632) 79 24.2 16 KIAA0051 ( 1678 res) ha00940 (1678) 84 25.6 16 KIAA0268 ( 1193 res) ha07061 (1193) 82 25.1 17 FLJ00269 ( 1383 res) sj06049 (1383) 82 25.2 18 FLJ00205 ( 359 res) sj04565 ( 359) 74 23.1 20 KIAA1209 ( 1113 res) fg05970 (1113) 80 24.7 20 KIAA1727 ( 1130 res) pg00153 (1130) 80 24.7 21 KIAA1419 ( 2464 res) ff01653 (2464) 84 25.8 21 KIAA1876 ( 803 res) pf01162s1 ( 803) 78 24.2 21 KIAA0625 ( 2663 res) hg04796s1 (2663) 84 25.8 22 KIAA0352 ( 721 res) hg01642 ( 721) 77 23.9 22 KIAA0571 ( 683 res) hh02388 ( 683) 76 23.7 24 KIAA0672 ( 824 res) hk02382 ( 824) 77 24.0 24 KIAA1666 ( 1003 res) fg02554 (1003) 78 24.3 24 FLJ00311 ( 249 res) sh06450 ( 249) 70 22.2 26 KIAA1110 ( 740 res) hh04831b(revised) ( 740) 75 23.6 29 KIAA0957 ( 693 res) hj05670 ( 693) 74 23.4 31 FLJ00150 ( 1793 res) sh05613 (1793) 79 24.7 31 KIAA0764 ( 419 res) hk04750 ( 419) 71 22.6 32 KIAA1034 ( 761 res) fh00753 ( 761) 74 23.4 33 KIAA0181 ( 2079 res) ha02522s1 (2079) 79 24.8 35 KIAA0650 ( 848 res) hj04147 ( 848) 74 23.5 36 KIAA1276 ( 1068 res) fh00139s1 (1068) 75 23.8 37 FLJ00190 ( 521 res) sj02368 ( 521) 71 22.7 37 KIAA0987 ( 1115 res) hk01713 (1115) 75 23.8 38 KIAA0887 ( 443 res) hk07788 ( 443) 70 22.4 38 KIAA1955 ( 947 res) fk07007 ( 947) 74 23.5 38 KIAA0244 ( 2044 res) ha04644s1 (2044) 78 24.6 39 KIAA1132 ( 2092 res) hh01132s1 (2092) 78 24.6 40 KIAA0371 ( 1203 res) hh00252 (1203) 75 23.8 40 >>FLJ00298 ( 527 res) sh04009 (527 aa) initn: 1375 init1: 1375 opt: 1375 Z-score: 1353.8 bits: 258.8 E(): 3.3e-70 Smith-Waterman score: 1375; 100.000% identity (100.000% similar) in 201 aa overlap (1-201:327-527) 10 20 30 FLJ001 RSSELIHSGELTKITKQGKSQQRTFFLFDH :::::::::::::::::::::::::::::: FLJ002 NERKRKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKITKQGKSQQRTFFLFDH 300 310 320 330 340 350 40 50 60 70 80 90 FLJ001 QLVSCKKDLLRRDMLYYKGRLDMDEMELVDLGDGRDKDCNLSVKNAFKLVSRTTDEVYLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ002 QLVSCKKDLLRRDMLYYKGRLDMDEMELVDLGDGRDKDCNLSVKNAFKLVSRTTDEVYLF 360 370 380 390 400 410 100 110 120 130 140 150 FLJ001 CAKKQEDKARWLQACADERRRVQEDKEMGMEISENQKKLAMLNAQKAGHGKSKGYNRCPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ002 CAKKQEDKARWLQACADERRRVQEDKEMGMEISENQKKLAMLNAQKAGHGKSKGYNRCPV 420 430 440 450 460 470 160 170 180 190 200 FLJ001 APPHQGLHPIHQRHITMPTSVPQQQVFGLAEPKRKSSLFWHTFNRLTPFRK ::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ002 APPHQGLHPIHQRHITMPTSVPQQQVFGLAEPKRKSSLFWHTFNRLTPFRK 480 490 500 510 520 >>KIAA0424 ( 567 res) hh01267 (567 aa) initn: 720 init1: 653 opt: 731 Z-score: 723.3 bits: 142.2 E(): 4.3e-35 Smith-Waterman score: 731; 53.883% identity (80.097% similar) in 206 aa overlap (1-201:366-567) 10 20 FLJ001 RSSELIHSGELTKITKQ-GKSQQRTFFLFD ::::::..::.. : . :..:::.::::: KIAA04 NERKRRLENIDKIAQWQASVLDWEGEDILDRSSELIYTGEMAWIYQPYGRNQQRVFFLFD 340 350 360 370 380 390 30 40 50 60 70 80 FLJ001 HQLVSCKKDLLRRDMLYYKGRLDMDEMELVDLGDGRDKDCNLSVKNAFKLVSRTTDEVYL ::.: :::::.:::.::::::.:::..:.::. :::: : :.:.:::::: .. :.:..: KIAA04 HQMVLCKKDLIRRDILYYKGRIDMDKYEVVDIEDGRDDDFNVSMKNAFKLHNKETEEIHL 400 410 420 430 440 450 90 100 110 120 130 140 FLJ001 FCAKKQEDKARWLQACADERRRVQEDKEMGMEISENQKKLAMLNAQKAGHGKSKGYNRC- : ::: :.: :::.: .::. ::::...:.:::::::. : ....:. :.:: : KIAA04 FFAKKLEEKIRWLRAFREERKMVQEDEKIGFEISENQKRQAAMTVRKVP--KQKGVNSAR 460 470 480 490 500 510 150 160 170 180 190 200 FLJ001 ---PVAPPHQGLHPIHQRHITMPTSVPQQQVFGLAEPKRKSSLFWHTFNRLTPFRK : :: : :... . .: .. :.::: ..::::..: ::..:.:::::.: KIAA04 SVPPSYPPPQD--PLNHGQYLVPDGIAQSQVFEFTEPKRSQSPFWQNFSRLTPFKK 520 530 540 550 560 >>KIAA1112 ( 694 res) hj05505s1 (694 aa) initn: 518 init1: 518 opt: 617 Z-score: 610.8 bits: 121.7 E(): 8e-29 Smith-Waterman score: 617; 56.983% identity (76.536% similar) in 179 aa overlap (1-175:520-692) 10 20 FLJ001 RSSELIHSGELTKITK-QGKSQQRTFFLFD ::::::.:::::..:. :.::::: ::::: KIAA11 NERKRRLENIDKIAQWQSSIEDWEGEDLLVRSSELIYSGELTRVTQPQAKSQQRMFFLFD 490 500 510 520 530 540 30 40 50 60 70 80 FLJ001 HQLVSCKKDLLRRDMLYYKGRLDMDEMELVDLGDGRDKDCNLSVKNAFKLVSRTTDEVYL :::. :::::::::.:::::::::: .:.::: ::.:.: ..:.::::.: .: . .: KIAA11 HQLIYCKKDLLRRDVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHL 550 560 570 580 590 600 90 100 110 120 130 140 FLJ001 FCAKKQEDKARWLQACADERRRVQEDKEMGMEISENQKKLAMLNAQKAG-HGKSKGYNRC .:..: :.: :::.: : ::..:: :.: :. :.: :.: :::::.: :: :: : KIAA11 LCTRKPEQKQRWLKAFAREREQVQLDQETGFSITELQRKQAMLNASKQQVTGKPKG--RR 610 620 630 640 650 660 150 160 170 180 190 200 FLJ001 PVAPPHQ--GLHPIHQRHITMPTSVPQQQVFGLAEPKRKSSLFWHTFNRLTPFRK .::: . : .: .: : ::.: KIAA11 TAAPPPRLPGPYPAD----IIPFSEPQSQAS 670 680 690 >>KIAA0793 ( 1055 res) hk05692 (1055 aa) initn: 88 init1: 57 opt: 120 Z-score: 122.3 bits: 31.9 E(): 0.13 Smith-Waterman score: 121; 28.448% identity (56.034% similar) in 116 aa overlap (4-119:756-859) 10 20 30 FLJ001 RSSELIHSGELTKITKQGKSQQRTFFLFDHQLV :.:. : : :.::.: ::: ::::. .:. KIAA07 HILIRLENLQKLTELQRDLVGIENLIAPGREFIREGCLHKLTKKGL-QQRMFFLFSDMLL 730 740 750 760 770 780 40 50 60 70 80 90 FLJ001 SCKKDLLRRDMLYYKGRLDMDEMELVDLGDGRDKDCNLSVKNAFKLVSRTTDEVYLFCAK .: . . . .: : .. : ::. ..: . :: . : . . .... . :. KIAA07 YTSKGVAGTSHFRIRGLLPLQGM-LVE-----ESDNEWSVPHCFTIYA--AQKTIVVAAS 790 800 810 820 830 100 110 120 130 140 150 FLJ001 KQEDKARWLQACADERRRVQEDKEMGMEISENQKKLAMLNAQKAGHGKSKGYNRCPVAPP . .: .:. : .: : : KIAA07 TRLEKEKWML---DLNSAIQAAKSGGDTAPALPGRTVCTRPPRSPNEVSLEQESEDDARG 840 850 860 870 880 890 >>KIAA1971 ( 830 res) fk08985 (830 aa) initn: 64 init1: 64 opt: 106 Z-score: 109.9 bits: 29.3 E(): 0.64 Smith-Waterman score: 106; 24.299% identity (60.748% similar) in 107 aa overlap (27-131:431-536) 10 20 30 40 50 FLJ001 RSSELIHSGELTKITKQGKSQQRTFFLFDHQLVSCKKDLLRR--DMLYYKGRLDMD :. :: : :. . .. ...:: . . KIAA19 NVVDELEIQFYEIQLELYEVKFEILKNEEILLTTQLDSLKRLIKEKQDEVVYYDPCENPE 410 420 430 440 450 460 60 70 80 90 100 110 FLJ001 EMELVDLGDGRDKDCNLSVKNAFKLVSRTTDEVYLFCAKKQEDKARWLQACADERRRVQE :....: : . : :: ::. . .. .. .:::. ..: : ..: :.:. KIAA19 ELKVIDCVVGLQDDKNLEVKELRRQCQQLESKRGRICAKRASLRSRKDQCKENHRFRLQQ 470 480 490 500 510 520 120 130 140 150 160 170 FLJ001 DKEMGMEISENQKKLAMLNAQKAGHGKSKGYNRCPVAPPHQGLHPIHQRHITMPTSVPQQ .: ... :...... : KIAA19 AEE-SIRYSRQHHSIQMKRDKIKEEEQKKKEWINQERQKTLQRLRSFKDKRLAQSVRNTS 530 540 550 560 570 >>KIAA1415 ( 1621 res) hg04328s1 (1621 aa) initn: 172 init1: 66 opt: 106 Z-score: 106.4 bits: 29.6 E(): 1 Smith-Waterman score: 200; 30.769% identity (58.974% similar) in 156 aa overlap (3-136:232-385) 10 20 30 FLJ001 RSSELIHSGELTKITKQGKSQQRTFFLFDHQL ..:. .: : ::. :. :.:.:::::. : KIAA14 TKRQMEKLEALEQLQSHIEGWEGSNLTDICTQLLLQGTLLKISA-GNIQERAFFLFDNLL 210 220 230 240 250 260 40 50 60 70 FLJ001 VSCK--------KDLLRR------DMLYYKGRLDMDEMELVDLGDGR-DKDCN-LSVKNA : :: : .: .. ..::.. . ::. .. :: : : .: :. KIAA14 VYCKRKSRVTGSKKSTKRTKSINGSLYIFRGRINTEVMEVENVEDGTADYHSNGYTVTNG 270 280 290 300 310 320 80 90 100 110 120 130 FLJ001 FKLVSRTTDEVYLFCAKKQEDKARWLQACADERRRVQEDKEMGME------ISENQKKLA .:. . . .. .. :: :.: .::.: ::.. .:. ..::: :.:. .:: KIAA14 WKIHNTAKNKWFVCMAKTAEEKQKWLDAIIREREQ-RESLKLGMERDAYVMIAEKGEKLY 330 340 350 360 370 140 150 160 170 180 190 FLJ001 MLNAQKAGHGKSKGYNRCPVAPPHQGLHPIHQRHITMPTSVPQQQVFGLAEPKRKSSLFW . .: KIAA14 HMMMNKKVNLIKDRRRKLSTVPKCFLGNEFVAWLLEIGEISKTEEGVNLGQALLENGIIH 380 390 400 410 420 430 >>KIAA1639 ( 2584 res) af14886 (2584 aa) initn: 83 init1: 58 opt: 106 Z-score: 103.9 bits: 29.8 E(): 1.4 Smith-Waterman score: 106; 30.928% identity (56.701% similar) in 97 aa overlap (19-110:532-621) 10 20 30 40 FLJ001 RSSELIHSGELTKITKQGKSQQRTFFLFDHQLVSCK--KDLLRRDMLY :...: ::: ..:: :: .: : : . KIAA16 YPGTLQALGEPIRQGHFIVWEGAPGARMPWKGHNRHVFLFRNHLVICKPRRDS-RTDTVS 510 520 530 540 550 560 50 60 70 80 90 100 FLJ001 YKGRLDMDEMELVDLGDGRDKDCNLSVKNAFKLVSRTTDEV--YLFCAKKQEDKARWLQA : : .: .. .::.: . : ::.. .. : : ::. :. :. :.. KIAA16 YVFR-NMMKLSSIDLNDQVEGD-----DRAFEVWQEREDSVRKYLLQARTAIIKSSWVKE 570 580 590 600 610 110 120 130 140 150 160 FLJ001 -CADERRRVQEDKEMGMEISENQKKLAMLNAQKAGHGKSKGYNRCPVAPPHQGLHPIHQR :. ..: KIAA16 ICGIQQRLALPVWRPPDFEEELADCTAELGETVKLACRVTGTPKPVISWYKDGKAVQVDP 620 630 640 650 660 670 >>KIAA1855 ( 1270 res) fg04654 (1270 aa) initn: 80 init1: 53 opt: 94 Z-score: 95.9 bits: 27.3 E(): 3.8 Smith-Waterman score: 96; 28.767% identity (49.315% similar) in 146 aa overlap (52-182:486-618) 30 40 50 60 70 FLJ001 QRTFFLFDHQLVSCKKDLLRRDMLYYKGRLDMDEMELVDLGDGRDKDCNLS--VKNAFKL :.: : : . ::. .:. .: KIAA18 QASGRMDVSASVEQEALSNAFRSVPLAEEEDFDSKEWVII----DKETELKDFPPGAEPS 460 470 480 490 500 510 80 90 100 110 120 130 FLJ001 VSRTTDEVYLFCAKKQEDKARWLQACADERRRVQED---KEMGMEISE-NQKKLAMLNAQ .: :::: . .. : : ..::::. . . : .. .. : : : KIAA18 TSGTTDE--------EPEELRPLPEEGEERRRLGAEPTVRPRGRSMQALAEEDLQHLPPQ 520 530 540 550 560 140 150 160 170 180 FLJ001 KAGHGKSKGYNRC-------PVAPPHQGLH--PIHQRHITMPTSVPQQQVFGLAEPKRKS :.: .: : .: :. :: : .:. . ::. ::.:::..: : KIAA18 PLPPQLSQGDGRSETSQPPTPGSPSHSPLHSGPRPRRRESDPTG-PQRQVFSVAPPFEVN 570 580 590 600 610 620 190 200 FLJ001 SLFWHTFNRLTPFRK KIAA18 GLPRAVPLSLPYQDFKRDLSDYRERARLLNRVRRVGFSHMLLTTPQVPLAPVQPQANGKE 630 640 650 660 670 680 >>KIAA0665 ( 760 res) hk02064 (760 aa) initn: 74 init1: 74 opt: 87 Z-score: 91.7 bits: 25.8 E(): 6.5 Smith-Waterman score: 87; 25.000% identity (55.172% similar) in 116 aa overlap (56-163:552-661) 30 40 50 60 70 80 FLJ001 FLFDHQLVSCKKDLLRRDMLYYKGRLDMDEMELVDLGDGRDKDCNLSVK-NAFKLV---S .. .: ... ..:. .: : .: . KIAA06 MVLEETRRQKELLCKMEREKSIEIENLQTRLQQLDEENSELRSCTPCLKANIERLEEEKQ 530 540 550 560 570 580 90 100 110 120 130 FLJ001 RTTDEVY---LFCAKKQEDKARWLQACADERRRVQEDKEMGMEISEN-QKKLAMLNAQKA . ::. : ...::.: : . . ::.. :.::: .:. :. .:.: :. : KIAA06 KLLDEIESLTLRLSEEQENKRRMGDRLSHERHQFQRDKEATQELIEDLRKQLEHLQLLKL 590 600 610 620 630 640 140 150 160 170 180 190 FLJ001 GHGKSKGYNRCPVAPPHQGLHPIHQRHITMPTSVPQQQVFGLAEPKRKSSLFWHTFNRLT . .: . .::. :.: KIAA06 EAEQRRGRSSS------MGLQEYHSRARESELEQEVRRLKQDNRNLKEQNEELNGQIITL 650 660 670 680 690 >>KIAA0269 ( 567 res) ha06751 (567 aa) initn: 97 init1: 45 opt: 84 Z-score: 90.3 bits: 25.1 E(): 7.8 Smith-Waterman score: 84; 41.860% identity (60.465% similar) in 43 aa overlap (150-187:456-497) 120 130 140 150 160 170 FLJ001 MEISENQKKLAMLNAQKAGHGKSKGYNRCPVAPPHQGLHPIHQR----HIT-MPTSVPQQ .: : .:::: . :. :: : : . KIAA02 GEVQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGPHVPLMPPS-PPS 430 440 450 460 470 480 180 190 200 FLJ001 QVFGLAEPKRKSSLFWHTFNRLTPFRK ::. .::::. : KIAA02 QVIPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILS 490 500 510 520 530 540 201 residues in 1 query sequences 2210793 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:44:19 2009 done: Fri Feb 27 10:44:19 2009 Total Scan time: 0.360 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]