# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj02293.fasta.huge -Q ../query/FLJ00327.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00327, 266 aa vs ./tmplib.10216 library 2210728 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.1850+/-0.00458; mu= 13.9243+/- 0.310 mean_var=122.6659+/-27.025, 0's: 0 Z-trim: 4 B-trim: 0 in 0/40 Lambda= 0.115801 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1955 ( 947 res) fk07007 ( 947) 427 81.8 1.4e-16 KIAA1008 ( 935 res) hh04776s1 ( 935) 418 80.3 4e-16 FLJ00244 ( 1124 res) sj07756 (1124) 125 31.5 0.24 KIAA1769 ( 2114 res) af00171 (2114) 125 31.9 0.35 KIAA1802 ( 821 res) fj21631 ( 821) 106 28.1 1.8 FLJ00278 ( 176 res) sh01653 ( 176) 95 25.4 2.6 FLJ00369 ( 700 res) sh06511 ( 700) 94 26.0 6.6 KIAA0945 ( 797 res) hj04760 ( 797) 92 25.8 9 KIAA1665 ( 217 res) hk01809 ( 217) 85 23.9 9.3 KIAA0975 ( 1528 res) hj06890 (1528) 95 26.7 9.4 KIAA2036 ( 1322 res) pf06513 (1322) 94 26.4 9.7 FLJ00280 ( 440 res) sh01728 ( 440) 88 24.8 10 KIAA1123 ( 1717 res) fh01458 (1717) 95 26.7 10 KIAA1554 ( 1320 res) fh17222 (1320) 93 26.2 11 FLJ00039 ( 1438 res) as00039 (1438) 93 26.3 11 FLJ00386 ( 811 res) sj04204 ( 811) 90 25.5 11 KIAA0402 ( 3284 res) hg01127s1 (3284) 97 27.4 12 KIAA1523 ( 687 res) fh16681(revised) ( 687) 87 24.9 15 FLJ00295 ( 770 res) sh03877 ( 770) 87 24.9 16 KIAA0527 ( 768 res) hg02246 ( 768) 86 24.8 18 KIAA0316 ( 1379 res) fg06820 (1379) 89 25.6 18 KIAA0269 ( 567 res) ha06751 ( 567) 84 24.3 19 KIAA1345 ( 1532 res) fj00488 (1532) 89 25.7 19 KIAA0821 ( 1566 res) hh02631 (1566) 89 25.7 19 KIAA1067 ( 690 res) hj05418 ( 690) 84 24.4 21 KIAA0406 ( 1095 res) hg01335s1 (1095) 86 25.0 22 KIAA1357 ( 836 res) fj01906 ( 836) 83 24.3 26 KIAA0782 ( 1281 res) hk05405s1 (1281) 85 24.9 27 KIAA1608 ( 872 res) fj20142 ( 872) 83 24.3 27 KIAA1556 ( 1595 res) fh18619 (1595) 86 25.2 27 FLJ00224 ( 896 res) sj06244 ( 896) 83 24.3 27 KIAA1110 ( 740 res) hh04831b(revised) ( 740) 82 24.1 27 KIAA0188 ( 899 res) ha02734 ( 899) 83 24.3 27 KIAA1458 ( 612 res) fh16694 ( 612) 81 23.8 27 KIAA0516 ( 1382 res) hg00484s2 (1382) 85 24.9 28 KIAA0263 ( 462 res) pj01112 ( 462) 79 23.3 29 KIAA0944 ( 4031 res) hj04408s1 (4031) 90 26.4 30 KIAA0135 ( 1351 res) ha01203s1 (1351) 84 24.8 31 KIAA1220 ( 791 res) fh03489 ( 791) 81 23.9 32 KIAA1075 ( 1505 res) hj06716s1 (1505) 84 24.8 33 FLJ00067 ( 574 res) as00067 ( 574) 79 23.4 33 KIAA1403 ( 1337 res) fg02666s1 (1337) 83 24.6 35 KIAA1261 ( 787 res) hh15855b ( 787) 80 23.8 36 KIAA1545 ( 968 res) fj14026s1 ( 968) 81 24.1 36 KIAA1211 ( 803 res) fh00041 ( 803) 80 23.8 36 KIAA1698 ( 908 res) fj15036 ( 908) 80 23.9 39 KIAA0505 ( 200 res) hh00043 ( 200) 72 21.6 40 KIAA1996 ( 437 res) bj00079 ( 437) 76 22.8 40 FLJ00091 ( 170 res) as00091 ( 170) 71 21.4 40 KIAA1683 ( 832 res) fh24307 ( 832) 79 23.6 41 >>KIAA1955 ( 947 res) fk07007 (947 aa) initn: 372 init1: 175 opt: 427 Z-score: 390.9 bits: 81.8 E(): 1.4e-16 Smith-Waterman score: 427; 37.438% identity (65.517% similar) in 203 aa overlap (20-217:563-762) 10 20 30 40 FLJ003 RARPAAAWESLRTCPQTPAVPPIPPTLCRLVEEFMLLANMAVAHKIHRA .: : . . : : :.::: ::.:: .. KIAA19 RAKRDGCGALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWES 540 550 560 570 580 590 50 60 70 80 90 100 FLJ003 FPEQALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEV ::.:::::.::::. ...:.: : :. .: : .: :: .. .: .. ... KIAA19 FPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNA--NDPHDPIVNRL 600 610 620 630 640 650 110 120 130 140 150 160 FLJ003 LTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALG : .: .. :. :::: .: . .:.::.: . ::::::::::..:..::::: ::.. KIAA19 LRSMATQAMSNALYFSTGSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS 660 670 680 690 700 170 180 190 200 210 220 FLJ003 YRERLDMAPDT-----LQKQADHCNDRRMASKRVQELSTSLFFAVLVKVSPPAWCPSPPS ..... . :.. : :.: .:... :. :: :: . : . :: KIAA19 KDKKMEIKGNLFSNKDLEELCRHINNRNQAAQHSQKQSTELFQCMYFKDKDPATEERCIS 710 720 730 740 750 760 230 240 250 260 FLJ003 GSRPSWAPAHQEASRSPGQCQEVPWLQHCPCRRVAPWSQKPW KIAA19 DGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKPGSLQRFQNKITST 770 780 790 800 810 820 >>KIAA1008 ( 935 res) hh04776s1 (935 aa) initn: 401 init1: 179 opt: 418 Z-score: 382.8 bits: 80.3 E(): 4e-16 Smith-Waterman score: 418; 42.347% identity (64.286% similar) in 196 aa overlap (30-218:639-828) 10 20 30 40 50 FLJ003 RARPAAAWESLRTCPQTPAVPPIPPTLCRLVEEFMLLANMAVAHKIHRAFPEQALLRRH .:::::::::..::.:::. : :.::::.: KIAA10 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 610 620 630 640 650 660 60 70 80 90 100 110 FLJ003 PPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMCSRPMQ : : ::. . .: . ..: .: .:: :. . : . .: . .: :. KIAA10 PAPPPSNYEILVKAARSRNLEIKTDTAKSLAESLDQAESPTFPYL--NTLLRILATRCMM 670 680 690 700 710 720 120 130 140 150 160 170 FLJ003 MALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALGYRERLDMAPD .:.:::::. .: :.::.: :.::::::::::.:::.::::::.:.: : KIAA10 QAVYFCSGMDND---FHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTYPELTD 730 740 750 760 770 780 180 190 200 210 220 230 FLJ003 TLQKQADHCND---RRMASKRVQELS----TSLFFAVLVKVSPPAWCPSPPSGSRPSWAP .: :: :.. :. .. .:. : :.::: :: :. KIAA10 K-HKLADICKNLNFRHKMAQYAQRASVAFHTQLFFKSKGIVSEEAYILFVRKNAIVVLIP 790 800 810 820 830 840 240 250 260 FLJ003 AHQEASRSPGQCQEVPWLQHCPCRRVAPWSQKPW KIAA10 KYGLEGTVFFEEKDKPNPQLIYDDEIPSLKIEDTVFHVFDKVKVKIMLDSSNLQHQKIRM 850 860 870 880 890 900 >>FLJ00244 ( 1124 res) sj07756 (1124 aa) initn: 113 init1: 113 opt: 125 Z-score: 117.4 bits: 31.5 E(): 0.24 Smith-Waterman score: 129; 28.313% identity (53.012% similar) in 166 aa overlap (61-215:66-212) 40 50 60 70 FLJ003 VEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTRM--LSDL---VEFC------DQMGL ::.::. :..: :.: .:: FLJ002 QQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQDYEQM-- 40 50 60 70 80 90 80 90 100 110 120 130 FLJ003 PVDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYA ::. .. .. :. . : . .: :. . :.: :. : ::. FLJ002 -VDLVTTDDMHPFLAPAGRDLRKALERSAF--GRCARGHQQ-------------QGGHYS 100 110 120 130 140 150 160 170 180 190 FLJ003 LNVPLYTHFTSPIRRFADVLVHRLLAAALGYRERLDMAPDTLQKQADHCNDRRMASKRVQ :.: :: ::::::. ::...: . :::. : : .. . . .. .. : FLJ002 LQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARD-IDGLCQAFSLQHALAQSYQ 140 150 160 170 180 190 200 210 220 230 240 250 FLJ003 ELSTSLFFAVLVKVSPPAWCPSPPSGSRPSWAPAHQEASRSPGQCQEVPWLQHCPCRRVA . . :: .:: .:..: FLJ002 RRARSLHLAVQLKAQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEH 200 210 220 230 240 250 >>KIAA1769 ( 2114 res) af00171 (2114 aa) initn: 113 init1: 113 opt: 125 Z-score: 114.4 bits: 31.9 E(): 0.35 Smith-Waterman score: 129; 28.313% identity (53.012% similar) in 166 aa overlap (61-215:1056-1202) 40 50 60 70 FLJ003 VEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTRM--LSDL---VEFC------DQMGL ::.::. :..: :.: .:: KIAA17 QQLKALCEKHGDRVPLSLHLGHHLHGGGGSPPDTRLHLLASLWKQVQFAARTQDYEQM-- 1030 1040 1050 1060 1070 1080 80 90 100 110 120 130 FLJ003 PVDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYA ::. .. .. :. . : . .: :. . :.: :. : ::. KIAA17 -VDLVTTDDMHPFLAPAGRDLRKALERSAF--GRCARGHQQ-------------QGGHYS 1090 1100 1110 1120 140 150 160 170 180 190 FLJ003 LNVPLYTHFTSPIRRFADVLVHRLLAAALGYRERLDMAPDTLQKQADHCNDRRMASKRVQ :.: :: ::::::. ::...: . :::. : : .. . . .. .. : KIAA17 LQVDWYTWATSPIRRYLDVVLQRQILLALGHGGSAYSARD-IDGLCQAFSLQHALAQSYQ 1130 1140 1150 1160 1170 1180 200 210 220 230 240 250 FLJ003 ELSTSLFFAVLVKVSPPAWCPSPPSGSRPSWAPAHQEASRSPGQCQEVPWLQHCPCRRVA . . :: .:: .:..: KIAA17 RRARSLHLAVQLKAQPLDKLGFVVDVEAGSRCFRLLFPSNRETLPDPCPVPYGSLQLAEH 1190 1200 1210 1220 1230 1240 >>KIAA1802 ( 821 res) fj21631 (821 aa) initn: 102 init1: 77 opt: 106 Z-score: 101.7 bits: 28.1 E(): 1.8 Smith-Waterman score: 123; 34.921% identity (47.619% similar) in 63 aa overlap (213-265:316-372) 190 200 210 220 230 FLJ003 KQADHCNDRRMASKRVQELSTSLFFAVLVKVSPPAWCPSPPSGSRP----------SWAP ::: .: :.::.. :: : : KIAA18 EPRKPSPSESPEPWKPFPAVSPEPRRPAPAVSPGSWKPGPPGSPRPWKSNPSASSGPWKP 290 300 310 320 330 340 240 250 260 FLJ003 AHQEASRSPGQCQEVPWLQHCPCRRVAPWSQKPW :. : ::: :: . : .::. : KIAA18 AKPAPSVSPG-----PW-KPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESW 350 360 370 380 390 KIAA18 KSGPPELRKTAPTLSPEHWKAVPPVSPELRKPGPPLSPEIRSPAGSPELRKPSGSPDLWK 400 410 420 430 440 450 >>FLJ00278 ( 176 res) sh01653 (176 aa) initn: 91 init1: 67 opt: 95 Z-score: 99.0 bits: 25.4 E(): 2.6 Smith-Waterman score: 95; 32.203% identity (54.237% similar) in 59 aa overlap (187-241:95-153) 160 170 180 190 200 210 FLJ003 DVLVHRLLAAALGYRERLDMAPDTLQKQADHCNDRRMASKRVQELSTSLF--FAVLVKVS : . : . : .. :: :.: : . FLJ002 EFFMNPCRHVLCILSQYVHTHTHTHTHTHTHTHARVSSFYRNGNILKVLFCTFTVQVPNT 70 80 90 100 110 120 220 230 240 250 260 FLJ003 PPAWCPSP-PS-GSRPSWAPAHQEASRSPGQCQEVPWLQHCPCRRVAPWSQKPW :: :: : :. :. .: :. ...:: FLJ002 PPRTCPRPQPGKGGAGTWPPSSASSAHSPQYPPTHPQQLTRPQAATKNHTKK 130 140 150 160 170 >>FLJ00369 ( 700 res) sh06511 (700 aa) initn: 122 init1: 73 opt: 94 Z-score: 91.6 bits: 26.0 E(): 6.6 Smith-Waterman score: 94; 42.500% identity (47.500% similar) in 40 aa overlap (215-254:585-618) 190 200 210 220 230 240 FLJ003 ADHCNDRRMASKRVQELSTSLFFAVLVKVSPPAWCPSPPSGSRPSWAPAHQEASRSPGQC :: :: ::. : ::: : .: FLJ003 TWVFFPHLPSPSDLPATFHFFSPSSPFSFKPP--CPLPPT---PRLAPASWCPSLNPPPL 560 570 580 590 600 250 260 FLJ003 QEVPWLQHCPCRRVAPWSQKPW ::: :: FLJ003 CSVPW-GPCPPYSWGAGSASCPSLCRCFGDPLVGAGRWVRFHLGPPLTLCPSLPRRWKRW 610 620 630 640 650 660 >>KIAA0945 ( 797 res) hj04760 (797 aa) initn: 83 init1: 61 opt: 92 Z-score: 89.2 bits: 25.8 E(): 9 Smith-Waterman score: 92; 32.759% identity (51.724% similar) in 58 aa overlap (212-265:261-317) 190 200 210 220 230 FLJ003 QKQADHCNDRRMASKRVQELSTSLFFAVLVKVSPPAWCPSPPSGSRP-SWAPAHQ-EASR :. : : :. . . : .: : . ::. KIAA09 LKLSQERELPLRLPRAHAEVDGRSTEPPAPKAPRPKW-PKVNGKNYPKAWQGASSGEAAG 240 250 260 270 280 240 250 260 FLJ003 SPGQ--CQEVPWLQHCPCRRVAPWSQKPW :: : . :: . :: . :.:: KIAA09 PPGWQGCPDEPWPSATPCGPSVQPSHKPLSKALESPLGLRPHLPLLMGGQAALKPEPGRP 290 300 310 320 330 340 >>KIAA1665 ( 217 res) hk01809 (217 aa) initn: 64 init1: 41 opt: 85 Z-score: 89.0 bits: 23.9 E(): 9.3 Smith-Waterman score: 85; 22.596% identity (51.923% similar) in 208 aa overlap (55-249:3-197) 30 40 50 60 70 80 FLJ003 PTLCRLVEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLSDLVEFCDQMGLPVDFS :: .:: :. :. :::. : . .: .. KIAA16 LTLLFPEPPAQAGMFV-LVEMVDTVRIP-PWQ 10 20 30 90 100 110 120 130 FLJ003 SAGALNKSLTQTFGDDKYSLARKEVLT-NMCS-----RPMQMALYF-CSGLLQDPAQFRH :: :... .. .:: : : . ..: .. : : .: . ..:: KIAA16 FERKLNDSIAEELNK---KLANKVVYNVGLCICLFDITKLEDAYVFPGDGASHTKVHFRC 40 50 60 70 80 140 150 160 170 180 190 FLJ003 YALNVPLYTHFTSPIRRFADVLVHRLLAAALGYRERLDMAPDTLQKQA--DHCNDRRMAS ... : . . :. . :: ..::. . . . :..::. : :. .. . KIAA16 VVFHPFLDEILIGKIKGCSPEGVH----VSLGFFDDILIPPESLQQPAKFDEAEQVWVWE 90 100 110 120 130 140 200 210 220 230 240 250 FLJ003 KRVQELSTSLFF----AVLVKVSPPAWCPSPPSGSRPSWAPAHQEASRSPGQCQEVPWLQ ...: . .:.. . .: .. . :.: :: : : . . : . :.:. KIAA16 YETEEGAHDLYMDTGEEIRFRVVDESFVDTSPTG--PSSADATTSSEELPKK--EAPYTL 150 160 170 180 190 260 FLJ003 HCPCRRVAPWSQKPW KIAA16 VGSISEPGLGLLSWWTSN 200 210 >>KIAA0975 ( 1528 res) hj06890 (1528 aa) initn: 76 init1: 76 opt: 95 Z-score: 88.9 bits: 26.7 E(): 9.4 Smith-Waterman score: 95; 30.952% identity (50.000% similar) in 126 aa overlap (148-265:1009-1131) 120 130 140 150 160 170 FLJ003 MQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALGYRERLDMA :. : ..: . :. : :.: . . .: KIAA09 PTRSCTQPRGAFADGHVLELLVGYRFVTAIFVLPHEKFHFLRVYNQLRASLQDLKTVVIA 980 990 1000 1010 1020 1030 180 190 200 210 220 FLJ003 --PDTLQKQ----ADHCNDRRMAS--KRVQELSTSLFFAVLVKVSPPAWCPSPPSGSRPS : : . :: .: :: .: ::. . . . :.: :: :. :.: :. KIAA09 KTPGTGGSAQGSFADGQPAERRASNDQRPQEVPAEALAPAPVEVPAPA--PAAASASGPA 1040 1050 1060 1070 1080 1090 230 240 250 260 FLJ003 WAPAHQEASRSPGQCQEVPWLQHCPCRRVAPWSQKPW .:: ::: : .:.: : :: .: : KIAA09 KTPAPAEASTSALVPEETPVEAPAPPPAEAP-AQYPSEHLIQATSEENQIPSHLPACPSL 1100 1110 1120 1130 1140 1150 KIAA09 RHVASLRGSAIIELFHSSIAEVENEELRHLMWSSVVFYQTPGLEVTACVLLSTKAVYFVL 1160 1170 1180 1190 1200 1210 266 residues in 1 query sequences 2210728 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:51:49 2009 done: Fri Feb 27 10:51:50 2009 Total Scan time: 0.410 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]