# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj02706.fasta.huge -Q ../query/FLJ00194.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00194, 196 aa vs ./tmplib.10216 library 2210798 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.5934+/-0.00432; mu= 7.6848+/- 0.291 mean_var=113.5556+/-25.437, 0's: 0 Z-trim: 2 B-trim: 0 in 0/40 Lambda= 0.120357 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0535 ( 1047 res) hg03847 (1047) 123 31.7 0.14 KIAA1671 ( 364 res) hh02164 ( 364) 115 29.9 0.18 KIAA0744 ( 619 res) hk04110 ( 619) 99 27.3 1.8 KIAA1050 ( 829 res) hh03308 ( 829) 94 26.6 3.9 KIAA0835 ( 1167 res) hj05861 (1167) 94 26.8 4.9 KIAA1034 ( 761 res) fh00753 ( 761) 89 25.7 6.7 KIAA0662 ( 1114 res) hk01953s1 (1114) 88 25.7 9.8 KIAA0441 ( 702 res) hh00601s1 ( 702) 85 25.0 10 KIAA0332 ( 1028 res) hg00939 (1028) 87 25.5 11 KIAA0828 ( 619 res) hh04230 ( 619) 82 24.4 14 KIAA1814 ( 1285 res) ph00952 (1285) 86 25.4 14 KIAA0583 ( 1952 res) af01829 (1952) 88 26.0 14 KIAA1123 ( 1717 res) fh01458 (1717) 87 25.7 15 KIAA1912 ( 589 res) fj18220 ( 589) 81 24.2 15 KIAA1204 ( 1445 res) fg03451 (1445) 86 25.5 15 KIAA1136 ( 596 res) hj01467 ( 596) 81 24.2 15 KIAA1641 ( 718 res) fj10609s1 ( 718) 82 24.5 15 KIAA1264 ( 753 res) hj01058 ( 753) 82 24.5 16 KIAA0117 ( 227 res) ha01845 ( 227) 75 22.7 16 KIAA1731 ( 2056 res) bf02656 (2056) 87 25.8 17 KIAA1735 ( 493 res) ph00512 ( 493) 79 23.8 17 KIAA0684 ( 1218 res) hk07567 (1218) 84 25.0 17 KIAA1267 ( 1105 res) hj06438 (1105) 83 24.8 18 KIAA1812 ( 803 res) hh13045 ( 803) 81 24.3 18 FLJ00353 ( 1766 res) sh01144 (1766) 85 25.4 19 FLJ00348 ( 778 res) sg00015 ( 778) 80 24.1 20 KIAA0434 ( 1571 res) hh02165 (1571) 83 25.0 23 KIAA0189 ( 1132 res) ha02928 (1132) 81 24.5 23 KIAA1106 ( 1154 res) fg01888 (1154) 81 24.5 23 KIAA1335 ( 2041 res) bf00973 (2041) 84 25.3 24 KIAA0763 ( 843 res) hk04726 ( 843) 79 24.0 24 KIAA1444 ( 416 res) fg03469a ( 416) 75 23.0 24 KIAA0845 ( 1034 res) hk05234s1 (1034) 80 24.3 25 KIAA1112 ( 694 res) hj05505s1 ( 694) 77 23.6 27 KIAA1454 ( 1265 res) fh15916 (1265) 80 24.4 28 KIAA1878 ( 453 res) pj01649 ( 453) 74 22.8 29 FLJ00380 ( 791 res) sj00753 ( 791) 77 23.6 29 KIAA0252 ( 702 res) ha07048s1 ( 702) 76 23.4 30 KIAA0471 ( 413 res) hg03220 ( 413) 73 22.6 30 KIAA1601 ( 690 res) fj10228 ( 690) 75 23.2 34 KIAA1083 ( 584 res) hj07423 ( 584) 74 23.0 34 KIAA1099 ( 864 res) hk07834 ( 864) 76 23.5 35 KIAA0480 ( 1288 res) hh00807 (1288) 78 24.0 36 KIAA1727 ( 1130 res) pg00153 (1130) 77 23.8 37 KIAA1113 ( 1131 res) hj06379(revised) (1131) 77 23.8 37 KIAA1337 ( 1438 res) fh16696 (1438) 78 24.1 39 FLJ00310 ( 291 res) sh06047 ( 291) 69 21.8 39 KIAA0080 ( 486 res) hh13320 ( 486) 71 22.4 43 KIAA0794 ( 490 res) hk06006 ( 490) 71 22.4 43 KIAA0979 ( 1483 res) hj07056s1 (1483) 77 23.9 44 >>KIAA0535 ( 1047 res) hg03847 (1047 aa) initn: 91 init1: 52 opt: 123 Z-score: 121.7 bits: 31.7 E(): 0.14 Smith-Waterman score: 123; 27.815% identity (54.967% similar) in 151 aa overlap (40-181:659-806) 10 20 30 40 50 60 FLJ001 LLAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSCPHQEETQH : : .... . .... . ..:. KIAA05 PLTSSNTSIPTPSSSPFKTSSILVNAAFYQALCDQEGWDTPINYSKTHGKTEEEKEKDPV 630 640 650 660 670 680 70 80 90 100 110 120 FLJ001 HTEEALREL-FQHVHDMPESAKKKQLIRQFNKQSLT-QTPGREPSTSQVQKRARSRSFSG . : :.: : ..: : : : :...:. .: ::: . : . . : :: :: KIAA05 SSLENLEEKKFPGEASIP-SPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSG 690 700 710 720 730 740 130 140 150 160 170 180 FLJ001 L-IKRKVLGNQMMSEKKK-KNPTPESVAIGELKGTSKENRNLLFSGSP-----AVTMTPT . :.: . : ..... : ::: . :.. :. .:.: :: : .: :::: KIAA05 CPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSL--SGCPRARKGGVKMTPT 750 760 770 780 790 800 190 FLJ001 RLKWSEGKKEGKKGFL . KIAA05 KEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGASLSWKLNKQE 810 820 830 840 850 860 >>KIAA1671 ( 364 res) hh02164 (364 aa) initn: 100 init1: 78 opt: 115 Z-score: 119.8 bits: 29.9 E(): 0.18 Smith-Waterman score: 115; 23.478% identity (60.000% similar) in 115 aa overlap (54-164:246-358) 30 40 50 60 70 80 FLJ001 YLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSCPHQEETQHH--TEEALRELFQH : . .. :..::.... . .: : .: KIAA16 PISHSLRRSRFSESESRSPLEDETDNTWMFKDSTEEKSPRKEESDEEETASKAERTPVSH 220 230 240 250 260 270 90 100 110 120 130 FLJ001 VHDMPE--SAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKVLGNQMM . :: . : :..:. ...::. :: . : .: :.. .:: ..: KIAA16 PQRMPAFPGMDPAVLKAQLHKRPEVDSPGETPSWAPQPKSPKSPFQPGVLGSRVLPSSMD 280 290 300 310 320 330 140 150 160 170 180 190 FLJ001 SEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRLKWSEGKKEGKKGFL ..... .:.:. . :::. .... KIAA16 KDERSDEPSPQ--WLKELKSKKRQSLYENQV 340 350 360 >>KIAA0744 ( 619 res) hk04110 (619 aa) initn: 75 init1: 48 opt: 99 Z-score: 102.0 bits: 27.3 E(): 1.8 Smith-Waterman score: 99; 21.667% identity (55.000% similar) in 180 aa overlap (28-195:71-242) 10 20 30 40 50 FLJ001 KLHTFERTGLLAPAYIRECARLHYLGSRTQASKDDLDLIASCHT--KSFQLAKSQKR : . ...: :: . . :.. .:. ::. KIAA07 SEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQ 50 60 70 80 90 100 60 70 80 90 100 110 FLJ001 NRVDSCPHQEETQHHTEEAL-----RELFQHVHDMPESAKKKQLIRQFNKQSLTQTPGRE .. . :: . :.: .: : .::... . . .. ..... :. .:.: :.. KIAA07 HENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQEVERHRREQQLPPLRGKD 110 120 130 140 150 160 120 130 140 150 160 FLJ001 PSTSQVQKRARSRSFSGLIKRKVLGNQMMSEKKKKN-PTP---ESVAIG-ELKGTSKENR :.: :. .. .. : . ..:.. :. :: .::. .: :. .. KIAA07 --------RGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWYTAAHHT 170 180 190 200 210 170 180 190 FLJ001 NLLFSGSPAVTMTPTRLKWSEGKKEGKKGFL .: :. : .:. : ...: : KIAA07 SLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLL 220 230 240 250 260 270 >>KIAA1050 ( 829 res) hh03308 (829 aa) initn: 102 init1: 56 opt: 94 Z-score: 95.7 bits: 26.6 E(): 3.9 Smith-Waterman score: 105; 30.769% identity (55.769% similar) in 104 aa overlap (90-190:493-594) 60 70 80 90 100 110 FLJ001 SCPHQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQSLT-QTPGREPSTSQVQK : : : ....:. :: ::: . : . . KIAA10 FASSEADDQEVSEENFEERKYPGEVTLTNFKLKFLSKDIKKELLTCPTPGCDGSGHITGN 470 480 490 500 510 520 120 130 140 150 160 170 FLJ001 RARSRSFSGL-IKRKVLGNQMMSEKKK-KNPTPESVAIGELKGTSKENRNLLFSGSPAVT : ::.:: . : : : : ... : ::: . :.. :. .:.: :: : . KIAA10 YASHRSLSGCPLADKSLRNLMAAHSADLKCPTPGCDGSGHITGNYASHRSL--SGCPRAK 530 540 550 560 570 580 180 190 FLJ001 MTPTRLKWSEGKKEGKKGFL . ... .. :: KIAA10 KSGVKVAPTKDDKEDPELMKCPVPGCVGLGHISGKYASHRSASGCPLAARRQKEGSLNGS 590 600 610 620 630 640 >>KIAA0835 ( 1167 res) hj05861 (1167 aa) initn: 81 init1: 56 opt: 94 Z-score: 93.9 bits: 26.8 E(): 4.9 Smith-Waterman score: 105; 30.769% identity (55.769% similar) in 104 aa overlap (90-190:831-932) 60 70 80 90 100 110 FLJ001 SCPHQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQSLT-QTPGREPSTSQVQK : : : ....:. :: ::: . : . . KIAA08 FASSEADDQEVSEENFEERKYPGEVTLTNFKLKFLSKDIKKELLTCPTPGCDGSGHITGN 810 820 830 840 850 860 120 130 140 150 160 170 FLJ001 RARSRSFSGL-IKRKVLGNQMMSEKKK-KNPTPESVAIGELKGTSKENRNLLFSGSPAVT : ::.:: . : : : : ... : ::: . :.. :. .:.: :: : . KIAA08 YASHRSLSGCPLADKSLRNLMAAHSADLKCPTPGCDGSGHITGNYASHRSL--SGCPRAK 870 880 890 900 910 180 190 FLJ001 MTPTRLKWSEGKKEGKKGFL . ... .. :: KIAA08 KSGVKVAPTKDDKEDPELMKCPVPGCVGLGHISGKYASHRSASGCPLAARRQKEGSLNGS 920 930 940 950 960 970 >>KIAA1034 ( 761 res) fh00753 (761 aa) initn: 47 init1: 47 opt: 89 Z-score: 91.5 bits: 25.7 E(): 6.7 Smith-Waterman score: 89; 25.556% identity (52.222% similar) in 90 aa overlap (42-124:567-647) 20 30 40 50 60 70 FLJ001 APAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSCPHQEETQHHT : . : ...:. . ..::..:: KIAA10 AANKSQGWLCELLRWKENPSPENRTLWENLCTIRRFLNLPQHERDVI----YEEESRHHH 540 550 560 570 580 590 80 90 100 110 120 FLJ001 EEALRELFQHVHDMPESAKKKQLIRQFNKQSLTQTPGRE-------PSTSQVQKRARSRS : . ::: ..: . : :: .. . ..: :: :. .. :. :::. KIAA10 SERM----QHVVQLPPEPVQV-LHRQQSQPAKESSPPREEAPPPPPPTEDSCAKKPRSRT 600 610 620 630 640 130 140 150 160 170 180 FLJ001 FSGLIKRKVLGNQMMSEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRLKW KIAA10 KISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIKFFQNQRYHVKHHGKLKEH 650 660 670 680 690 700 >>KIAA0662 ( 1114 res) hk01953s1 (1114 aa) initn: 72 init1: 45 opt: 88 Z-score: 88.5 bits: 25.7 E(): 9.8 Smith-Waterman score: 88; 24.800% identity (47.200% similar) in 125 aa overlap (78-193:428-546) 50 60 70 80 90 100 FLJ001 QLAKSQKRNRVDSCPHQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQSLTQTP : .: ..:: : .:::... :. . KIAA06 HKSGKQLPPHLVQGAKILNGAFRSWTKKQALAEHEDELPEHFKPSQLIKDLAKEIRLSEN 400 410 420 430 440 450 110 120 130 140 150 FLJ001 GREPSTSQVQKRARSRSFSGLIKRK--------VLGNQMMSEKKKKNPTPESVAIGELKG . . .:. : : ..: . : . :: .:. ::..: . . . KIAA06 ASKAVRPEVNTVASSDEVCDGDREKEEPPSPIEATPPQSLLEKVSKKKTPKTVKMPKPSK 460 470 480 490 500 510 160 170 180 190 FLJ001 TSKENRNLLFSGSPAVTMTPTRLKWSEG-KKEGKKGFL : . : : :: ..: ::.::: KIAA06 IPKPPK------PPKPPRPPKTLKLKDGGKKKGKKSRESASPTIPNLDLLEAHTKEALTK 520 530 540 550 560 570 KIAA06 MEPPKKGKATKSVLSVPNKDVVHMQNDVERLEIREQTKSKSEAKWKYKNSKPDSLLKMEE 580 590 600 610 620 630 >>KIAA0441 ( 702 res) hh00601s1 (702 aa) initn: 50 init1: 50 opt: 85 Z-score: 88.2 bits: 25.0 E(): 10 Smith-Waterman score: 85; 27.083% identity (52.083% similar) in 96 aa overlap (29-118:601-693) 10 20 30 40 50 FLJ001 KLHTFERTGLLAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRV :: .. .:: : . . : . :. : . KIAA04 MPGPSQGISIVTAESSQNMTADQAANLTLLTQQPEQLQNLILSAQQE--QTEHIQSLNMI 580 590 600 610 620 60 70 80 90 100 110 FLJ001 DSC--PHQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQS----LTQTPGREPS .: : : : : . .: ..:.: :.... .: . . . ::: :: : KIAA04 ESQMGPSQTEPVHVITLS-KETLEHLHAHQEQTEELHLATSTSDPAQHLQLTQEPGPPPP 630 640 650 660 670 680 120 130 140 150 160 170 FLJ001 TSQVQKRARSRSFSGLIKRKVLGNQMMSEKKKKNPTPESVAIGELKGTSKENRNLLFSGS : .: . KIAA04 THHVPQPTPLGQEQS 690 700 >>KIAA0332 ( 1028 res) hg00939 (1028 aa) initn: 49 init1: 49 opt: 87 Z-score: 88.0 bits: 25.5 E(): 11 Smith-Waterman score: 87; 25.806% identity (59.355% similar) in 155 aa overlap (51-193:858-1008) 30 40 50 60 70 FLJ001 RLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSCPHQEETQHHTEEAL-RELF .: :: . . ::...:. .. : :: KIAA03 KFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKE 830 840 850 860 870 880 80 90 100 110 120 130 FLJ001 QHVHDMPESAKK-KQLIRQFNKQSLTQ---TPGR-EPSTSQVQKRARSRSFSGLIKRKVL .... : :: :. ... .:.. . :: : : . . . . ::: :: :.: KIAA03 KELERERERDKKDKEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSG---RRVK 890 900 910 920 930 940 140 150 160 170 180 FLJ001 GNQMMSEKKKKNPTPESVAIGELKGTSKEN-RNLLFSG--SPAVTMTPTRLKWSEG---K . . ::..... .. . .. ... :.. :.. .. ::. . :: : . :.. : KIAA03 SPSPKSERSERSERSHKES-SRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPK 950 960 970 980 990 1000 190 FLJ001 KEGKKGFL : ::: KIAA03 KSGKKSRSQSRSPHRSHKKSKKNKH 1010 1020 >>KIAA0828 ( 619 res) hh04230 (619 aa) initn: 49 init1: 49 opt: 82 Z-score: 86.0 bits: 24.4 E(): 14 Smith-Waterman score: 82; 24.779% identity (55.752% similar) in 113 aa overlap (50-161:92-192) 20 30 40 50 60 70 FLJ001 ARLHYLGSRTQASKDDLDLIASCHTKSFQLAKSQKRNRVDSCPHQEETQHHTE-EALREL :...:: : ::... .:. ::: KIAA08 PAPAAERPPVPGPGSGPAAALSPAAGKVPQASAMKR----SDPHHQHQRHRDGGEALVSP 70 80 90 100 110 80 90 100 110 120 130 FLJ001 FQHVHDMPESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARSRSFSGLIKRKVLGNQM : . :...:: :. : :: ... : ... .:. :::.: . . KIAA08 DGTVTEAPRTVKKIQFADQ--KQEFNKRP------TKIGRRSLSRSISQSSTDSYSSAAS 120 130 140 150 160 140 150 160 170 180 190 FLJ001 MSEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRLKWSEGKKEGKKGFL ..... . .:.. . ::.: KIAA08 YTDSSDDETSPRDKQQKNSKGSSDFCVKNIKQAEFGRREIEIAEQEMPALMALRKRAQGE 170 180 190 200 210 220 196 residues in 1 query sequences 2210798 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:44:26 2009 done: Fri Feb 27 10:44:26 2009 Total Scan time: 0.360 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]